Prupe.6G308000_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27743197 .. 27745291
2095 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G308000.2

Sequence Viewer

Length: 1107 bp
ATGGTGTATGTGCAGGGGCTCAGTTGGGCTGATCAATCAGTGGGTCTGATAATAACACTCTCCGGAGCGGTGTTCTTGATCGTTCTCTCATCCTCAGTCGATGGCCAACTTTGTCCAACGAGTCCAGTCCAAATTTTCAACTTCGGCGACTCCAACTCGGACACGGGTGGACTTGTTGCCGGACTCGGCTTCTCTGTCAATCCCCCCAACGGCCGTACCTTCTTCGGCAAATCCACCGGTCGCCTGTCCGATGGACGCCTCGTCATCGACCTCCTCTGCCAGAGTCTGAATATGAGTCTATTGAGCCCATACCTAGACTCTTTGGCAGGCTCCATCTTCTCAAATGGGGCAAACTTTGCCGTTGCAGCGTCCTGTACCATCCCGAAGCGTTTCCCTTTTTCTTTGAGTATTCAAGTCATGCAGTTCATCCACTTCAAGGCTACTGCAGGTTCCAAACATTTGATAAATGATGAAGGTTTCCGGAAAGCACTTTACATGATCGATATCGGACAAAATGACCTTTCGTATTCTTTCACTAAAAACCTTTCGTACGTTCAAGTAACAGAGACAATTCCTTCAGTTATTGAAGAAATCAAGAGTGCGGTTAAGGCTTTATACGATCAAGGTGGAAGGAACTTTTGGATACACAACACCGGGCCGTTGGGTTGTCTCCCTCAAAAACTTTCATTAGTTGAAAAGAAGGATTTGGATCCATATGGATGTCTTTCGAGTTACAATGCGGCTGCAAGATCGTTCAATGAAGCATTGCTCCATTTGTGCAACGCGATGAGATCTGAATTGAAGGATGCTGTGATAGTCTATGTAGATATATATGCCATCAAGTATGATCTCATTGCCAACTCCACCAAATACGGTTTCTCTACGCCGCTAATGGCATGCTGTGGCAACGGAGGTCCTCCGTACAACTTCAATGCCGGGCGGCTCTGCGGTCGTCCTGGCTCTCATGTTTGTGACGAAGGATCCCGATTTGTGAGCTGGGATGGAATTCATTACACCGAAGCCGCAAACACCATCGTGGCCTCAAAGATACTTTCCACGAATTATTCCACACCACGCATTCCATTTGATTTCTTTTGTTGCAGATAG
Functional Annotation

Protein Analysis

369

Amino Acids

39.93

Weight (kDa)

6.96

Isoelectric Point (pI)

32.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 437
AccBSI CCGCTC 1 cut(s) 68
AccII CGCG 1 cut(s) 785
AccIII TCCGGA 2 cut(s) 62, 480
AciI CCGC 7 cut(s) 68, 602, 740, 887, 940, 948, 1023
AclWI GGATC 4 cut(s) 704, 717, 975, 988
AcoI YGGCCR 2 cut(s) 103, 211
AcsI RAATTY 2 cut(s) 132, 1005
AcuI CTGAAG 1 cut(s) 561
AcyI GRCGYC 1 cut(s) 256
AfaI GTAC 4 cut(s) 217, 376, 551, 923
AfiI CCNNNNNNNGG 2 cut(s) 209, 436
AgeI ACCGGT 1 cut(s) 236
AgsI TTSAA 9 cut(s) 139, 413, 436, 557, 587, 695, 757, 802, 931
AhdI GACNNNNNGTC 1 cut(s) 260
AjnI CCWGG 1 cut(s) 955
AjuI GAANNNNNNNTTGG 4 cut(s) 622, 654, 860, 892
AleI CACNNNNGTG 1 cut(s) 1034
AluBI AGCT 1 cut(s) 996
AluI AGCT 1 cut(s) 996
Alw26I GTCTC 2 cut(s) 560, 674
AlwI GGATC 4 cut(s) 704, 717, 975, 988
AlwNI CAGNNNCTG 1 cut(s) 286
Aor13HI TCCGGA 2 cut(s) 62, 480
AoxI GGCC 4 cut(s) 103, 211, 656, 1038
ApeKI GCWGC 2 cut(s) 365, 743
ApoI RAATTY 2 cut(s) 132, 1005
AsiGI ACCGGT 1 cut(s) 236
Asp700I GAANNNNTTC 1 cut(s) 389
AspS9I GGNCC 2 cut(s) 656, 914
AsuC2I CCSGG 2 cut(s) 655, 937
AvaII GGWCC 1 cut(s) 914
BaeI ACNNNNGTAYC 2 cut(s) 199, 232
BalI TGGCCA 1 cut(s) 105
BamHI GGATCC 2 cut(s) 709, 980
BanII GRGCYC 2 cut(s) 21, 308
BbvI GCAGC 2 cut(s) 377, 730
BccI CCATC 7 cut(s) 95, 245, 341, 386, 845, 995, 1040
BceAI ACGGC 4 cut(s) 198, 226, 344, 643
BciT130I CCWGG 1 cut(s) 957
BciVI GTATCC 1 cut(s) 636
BclI TGATCA 1 cut(s) 31
BcnI CCSGG 2 cut(s) 655, 937
BcoDI GTCTC 2 cut(s) 560, 674
BfaI CTAG 1 cut(s) 314
BfmI CTRYAG 1 cut(s) 444
BfuAI ACCTGC 1 cut(s) 437
BfuI GTATCC 1 cut(s) 636
BglII AGATCT 1 cut(s) 791
BisI GCNGC 6 cut(s) 366, 741, 744, 887, 941, 1023
BlsI GCNGC 6 cut(s) 367, 742, 745, 888, 942, 1024
Bme1390I CCNGG 3 cut(s) 655, 937, 957
Bme18I GGWCC 1 cut(s) 914
BmeRI GACNNNNNGTC 1 cut(s) 260
BmgT120I GGNCC 2 cut(s) 656, 914
BmiI GGNNCC 4 cut(s) 331, 451, 711, 982
BmrFI CCNGG 3 cut(s) 655, 937, 957
BmsI GCATC 1 cut(s) 796
BpuMI CCSGG 2 cut(s) 655, 937
Bsa29I ATCGAT 1 cut(s) 501
BsaBI GATNNNNATC 2 cut(s) 503, 708
BsaHI GRCGYC 1 cut(s) 256
BsaWI WCCGGW 3 cut(s) 62, 236, 480
Bsc4I CCNNNNNNNGG 2 cut(s) 209, 436
Bse118I RCCGGY 1 cut(s) 236
Bse1I ACTGG 1 cut(s) 125
Bse3DI GCAATG 2 cut(s) 764, 852
Bse8I GATNNNNATC 2 cut(s) 503, 708
BseAI TCCGGA 2 cut(s) 62, 480
BseBI CCWGG 1 cut(s) 957
BseCI ATCGAT 1 cut(s) 501
BseGI GGATG 6 cut(s) 89, 378, 426, 725, 811, 1006
BseJI GATNNNNATC 2 cut(s) 503, 708
BseLI CCNNNNNNNGG 2 cut(s) 209, 436
BseMI GCAATG 2 cut(s) 764, 852
BseMII CTCAG 2 cut(s) 34, 108
BseNI ACTGG 1 cut(s) 125
BseRI GAGGAG 1 cut(s) 263
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 2 cut(s) 377, 730
BseYI CCCAGC 1 cut(s) 996
BsgI GTGCAG 1 cut(s) 32
Bsh1236I CGCG 1 cut(s) 785
Bsh1285I CGRYCG 3 cut(s) 214, 241, 952
BshFI GGCC 4 cut(s) 105, 213, 658, 1040
BshTI ACCGGT 1 cut(s) 236
BshVI ATCGAT 1 cut(s) 501
BsiEI CGRYCG 3 cut(s) 214, 241, 952
BsiSI CCGG 6 cut(s) 63, 180, 237, 481, 654, 936
BsiWI CGTACG 1 cut(s) 549
BslI CCNNNNNNNGG 2 cut(s) 209, 436
BsmAI GTCTC 2 cut(s) 560, 674
BsmI GAATGC 1 cut(s) 1077
BsnI GGCC 4 cut(s) 105, 213, 658, 1040
Bsp1286I GDGCHC 2 cut(s) 21, 308
Bsp13I TCCGGA 2 cut(s) 62, 480
Bsp143I GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
BspACI CCGC 7 cut(s) 68, 602, 740, 887, 940, 948, 1023
BspANI GGCC 4 cut(s) 105, 213, 658, 1040
BspCNI CTCAG 2 cut(s) 33, 107
BspDI ATCGAT 1 cut(s) 501
BspEI TCCGGA 2 cut(s) 62, 480
BspFNI CGCG 1 cut(s) 785
BspLI GGNNCC 4 cut(s) 331, 451, 711, 982
BspMAI CTGCAG 1 cut(s) 448
BspMI ACCTGC 1 cut(s) 437
BspPI GGATC 4 cut(s) 704, 717, 975, 988
BsrBI CCGCTC 1 cut(s) 68
BsrDI GCAATG 2 cut(s) 764, 852
BsrFI RCCGGY 1 cut(s) 236
BsrI ACTGG 1 cut(s) 125
BssAI RCCGGY 1 cut(s) 236
BssMI GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
BssNI GRCGYC 1 cut(s) 256
Bst2UI CCWGG 1 cut(s) 957
Bst4CI ACNGT 1 cut(s) 875
BstACI GRCGYC 1 cut(s) 256
BstAPI GCANNNNNTGC 1 cut(s) 356
BstC8I GCNNGC 2 cut(s) 328, 898
BstDEI CTNAG 2 cut(s) 20, 94
BstF5I GGATG 6 cut(s) 89, 378, 426, 725, 811, 1006
BstFNI CGCG 1 cut(s) 785
BstKTI GATC 9 cut(s) 34, 81, 501, 622, 712, 752, 794, 850, 983
BstMAI GTCTC 2 cut(s) 560, 674
BstMBI GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
BstMCI CGRYCG 3 cut(s) 214, 241, 952
BstMWI GCNNNNNNNGC 3 cut(s) 356, 365, 608
BstNI CCWGG 1 cut(s) 957
BstNSI RCATGY 1 cut(s) 900
BstSCI CCNGG 3 cut(s) 653, 935, 955
BstSFI CTRYAG 1 cut(s) 444
BstUI CGCG 1 cut(s) 785
BstV1I GCAGC 2 cut(s) 377, 730
BstX2I RGATCY 3 cut(s) 709, 791, 980
BstYI RGATCY 3 cut(s) 709, 791, 980
BstZI CGGCCG 1 cut(s) 211
Bsu15I ATCGAT 1 cut(s) 501
BsuI GTATCC 1 cut(s) 636
BsuRI GGCC 4 cut(s) 105, 213, 658, 1040
BsuTUI ATCGAT 1 cut(s) 501
BtgZI GCGATG 1 cut(s) 800
BtsCI GGATG 6 cut(s) 89, 378, 426, 725, 811, 1006
BtsIMutI CAGTG 1 cut(s) 45
BveI ACCTGC 1 cut(s) 437
Cac8I GCNNGC 2 cut(s) 328, 898
CaiI CAGNNNCTG 1 cut(s) 286
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 2 cut(s) 656, 914
ClaI ATCGAT 1 cut(s) 501
CseI GACGC 2 cut(s) 264, 357
Csp6I GTAC 4 cut(s) 216, 375, 550, 922
CspAI ACCGGT 1 cut(s) 236
CviAII CATG 4 cut(s) 418, 496, 897, 965
CviQI GTAC 4 cut(s) 216, 375, 550, 922
DdeI CTNAG 2 cut(s) 20, 94
DpnI GATC 9 cut(s) 33, 80, 500, 621, 711, 751, 793, 849, 982
DpnII GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
DriI GACNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 2 cut(s) 103, 211
EagI CGGCCG 1 cut(s) 211
Eam1105I GACNNNNNGTC 1 cut(s) 260
EclXI CGGCCG 1 cut(s) 211
Eco24I GRGCYC 2 cut(s) 21, 308
Eco32I GATATC 1 cut(s) 505
Eco47I GGWCC 1 cut(s) 914
Eco52I CGGCCG 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 561
EcoO109I RGGNCCY 1 cut(s) 914
EcoRI GAATTC 1 cut(s) 1005
EcoRII CCWGG 1 cut(s) 955
EcoRV GATATC 1 cut(s) 505
EcoT38I GRGCYC 2 cut(s) 21, 308
FaeI CATG 4 cut(s) 421, 499, 900, 968
FatI CATG 4 cut(s) 417, 495, 896, 964
FauNDI CATATG 1 cut(s) 715
FbaI TGATCA 1 cut(s) 31
Fnu4HI GCNGC 6 cut(s) 366, 741, 744, 887, 941, 1023
FokI GGATG 6 cut(s) 76, 365, 413, 732, 818, 1013
FriOI GRGCYC 2 cut(s) 21, 308
Fsp4HI GCNGC 6 cut(s) 366, 741, 744, 887, 941, 1023
FspBI CTAG 1 cut(s) 314
GluI GCNGC 6 cut(s) 366, 741, 744, 887, 941, 1023
GsaI CCCAGC 1 cut(s) 1000
HaeIII GGCC 4 cut(s) 105, 213, 658, 1040
HapII CCGG 6 cut(s) 63, 180, 237, 481, 654, 936
HgaI GACGC 2 cut(s) 264, 357
Hin1I GRCGYC 1 cut(s) 256
Hin1II CATG 4 cut(s) 421, 499, 900, 968
HinfI GANTC 6 cut(s) 121, 149, 183, 283, 295, 317
HpaII CCGG 6 cut(s) 63, 180, 237, 481, 654, 936
Hpy166II GTNNAC 1 cut(s) 170
Hpy188I TCNGA 6 cut(s) 48, 160, 250, 288, 509, 796
Hpy188III TCNNGA 6 cut(s) 63, 76, 382, 481, 595, 984
Hpy8I GTNNAC 1 cut(s) 170
HpyAV CCTTC 7 cut(s) 229, 467, 585, 624, 694, 796, 971
HpyCH4III ACNGT 1 cut(s) 875
HpyCH4IV ACGT 1 cut(s) 552
HpyCH4V TGCA 7 cut(s) 13, 365, 421, 446, 746, 780, 1101
HpyF10VI GCNNNNNNNGC 3 cut(s) 356, 365, 608
HpyF3I CTNAG 2 cut(s) 20, 94
HpySE526I ACGT 1 cut(s) 552
Hsp92I GRCGYC 1 cut(s) 256
Hsp92II CATG 4 cut(s) 421, 499, 900, 968
Kpn2I TCCGGA 2 cut(s) 62, 480
Ksp22I TGATCA 1 cut(s) 31
Kzo9I GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
LmnI GCTCC 3 cut(s) 65, 335, 774
Lsp1109I GCAGC 2 cut(s) 377, 730
LweI GCATC 1 cut(s) 796
MaeI CTAG 1 cut(s) 314
MaeII ACGT 1 cut(s) 552
MaeIII GTNAC 3 cut(s) 559, 731, 971
MalI GATC 9 cut(s) 33, 80, 500, 621, 711, 751, 793, 849, 982
MbiI CCGCTC 1 cut(s) 68
MboI GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
MboII GAAGA 3 cut(s) 214, 328, 599
MflI RGATCY 3 cut(s) 709, 791, 980
MhlI GDGCHC 2 cut(s) 21, 308
MlsI TGGCCA 1 cut(s) 105
MluCI AATT 5 cut(s) 132, 570, 797, 1005, 1060
MluNI TGGCCA 1 cut(s) 105
MlyI GAGTC 6 cut(s) 130, 143, 177, 292, 304, 311
MmeI TCCRAC 2 cut(s) 140, 177
MnlI CCTC 8 cut(s) 103, 269, 281, 284, 684, 905, 927, 1051
Mox20I TGGCCA 1 cut(s) 105
MroI TCCGGA 2 cut(s) 62, 480
MroXI GAANNNNTTC 1 cut(s) 389
MscI TGGCCA 1 cut(s) 105
MseI TTAA 1 cut(s) 606
MslI CAYNNNNRTG 3 cut(s) 718, 969, 1034
Msp20I TGGCCA 1 cut(s) 105
MspI CCGG 6 cut(s) 63, 180, 237, 481, 654, 936
MspR9I CCNGG 3 cut(s) 655, 937, 957
Mva1269I GAATGC 1 cut(s) 1077
MvaI CCWGG 1 cut(s) 957
MvnI CGCG 1 cut(s) 785
MwoI GCNNNNNNNGC 3 cut(s) 356, 365, 608
NciI CCSGG 2 cut(s) 655, 937
NdeI CATATG 1 cut(s) 715
NdeII GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
NlaIII CATG 4 cut(s) 421, 499, 900, 968
NlaIV GGNNCC 4 cut(s) 331, 451, 711, 982
NmeAIII GCCGAG 1 cut(s) 165
NmuCI GTSAC 1 cut(s) 971
NspI RCATGY 1 cut(s) 900
OliI CACNNNNGTG 1 cut(s) 1034
PaeI GCATGC 1 cut(s) 900
PctI GAATGC 1 cut(s) 1077
PdmI GAANNNNTTC 1 cut(s) 389
Pfl23II CGTACG 1 cut(s) 549
PinAI ACCGGT 1 cut(s) 236
PkrI GCNGC 6 cut(s) 367, 742, 745, 888, 942, 1024
PleI GAGTC 6 cut(s) 129, 143, 177, 291, 303, 311
PpsI GAGTC 6 cut(s) 129, 143, 177, 291, 303, 311
PpuMI RGGWCCY 1 cut(s) 914
Psp5II RGGWCCY 1 cut(s) 914
Psp6I CCWGG 1 cut(s) 955
PspFI CCCAGC 1 cut(s) 996
PspGI CCWGG 1 cut(s) 955
PspLI CGTACG 1 cut(s) 549
PspN4I GGNNCC 4 cut(s) 331, 451, 711, 982
PspPI GGNCC 2 cut(s) 656, 914
PspPPI RGGWCCY 1 cut(s) 914
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 286
PsuI RGATCY 3 cut(s) 709, 791, 980
RsaI GTAC 4 cut(s) 217, 376, 551, 923
RsaNI GTAC 4 cut(s) 216, 375, 550, 922
RseI CAYNNNNRTG 3 cut(s) 718, 969, 1034
SaqAI TTAA 1 cut(s) 606
SatI GCNGC 6 cut(s) 366, 741, 744, 887, 941, 1023
Sau3AI GATC 9 cut(s) 31, 78, 498, 619, 709, 749, 791, 847, 980
Sau96I GGNCC 2 cut(s) 656, 914
SchI GAGTC 6 cut(s) 130, 143, 177, 292, 304, 311
ScrFI CCNGG 3 cut(s) 655, 937, 957
SduI GDGCHC 2 cut(s) 21, 308
SfaNI GCATC 1 cut(s) 796
SfcI CTRYAG 1 cut(s) 444
SinI GGWCC 1 cut(s) 914
SmiMI CAYNNNNRTG 3 cut(s) 718, 969, 1034
SphI GCATGC 1 cut(s) 900
Sse9I AATT 5 cut(s) 132, 570, 797, 1005, 1060
SsiI CCGC 7 cut(s) 68, 602, 740, 887, 940, 948, 1023
SspMI CTAG 1 cut(s) 314
StyD4I CCNGG 3 cut(s) 653, 935, 955
TaaI ACNGT 1 cut(s) 875
TaiI ACGT 1 cut(s) 555
TaqI TCGA 4 cut(s) 99, 267, 501, 728
TasI AATT 5 cut(s) 132, 570, 797, 1005, 1060
TauI GCSGC 4 cut(s) 743, 889, 943, 1025
Tru1I TTAA 1 cut(s) 606
Tru9I TTAA 1 cut(s) 606
TscAI CASTG 1 cut(s) 45
TseFI GTSAC 1 cut(s) 971
TseI GCWGC 2 cut(s) 365, 743
Tsp45I GTSAC 1 cut(s) 971
TspDTI ATGAA 5 cut(s) 415, 486, 675, 774, 998
TspGWI ACGGA 2 cut(s) 909, 924
TspRI CASTG 1 cut(s) 45
VpaK11BI GGWCC 1 cut(s) 914
XapI RAATTY 2 cut(s) 132, 1005
XceI RCATGY 1 cut(s) 900
XmnI GAANNNNTTC 1 cut(s) 389
XspI CTAG 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.