Prupe.6G361900_v2.0.a1

Basic leucine zipper and W2 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0006554
Physical Location & Seq
Forward (+)
30477026 .. 30481236
4211 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G361900.1

Sequence Viewer

Length: 1236 bp
ATGAGCTCGAAGGAGAGACCCACTCTCGGTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCGCTGGACCCTGCAGCTTTCGCGGATGCAGTGGTCCAGATTTATCTGGATAATGCTGGTGATCTGGAACTTATTGCCAAGTGCATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCACTGGAGGCCGTACACAACCTGGAACAACAAAACCTGATGAGGGGGAGCGCCATCCTTACTCTGTACTAGAGAGTGAGGCTACACGTGATGTCATCTTACCATCTGTTATCTACATACAAAAAATTTTGAGGCGGAGGCCATTTCTGATAAAGAATCTCGAAAATGTTATGCGACGATTCCTTCAGTCGTTGGAGCTTTTTGAGGAAAATGAAAGGAAGAAGTTGGCAATCTTCACAGCGCTTGCATTCTCTCAGAAGCTATCGGGACTTCCACCCGAAACCGTGTTCCAGCCTATGCTCAAGGATAATCTTGTTGGCAAGGGGCTAGTTCTATCATTTATTACTGACTTCTTCAAGGAGTATCTTATTGATAACAGCCTTGATGATCTGATCTCCATTCTGAAGCGGGGTAAAGTGGAGGACAATCTTCTGGAGTTCTTCCCATCCACAAAGCGGTCTGATGAGAGTTTCTCTGAGCATTTCACCAAGGAAGGGCTAGTAGCCTTAGTTGAATACAATGAAAAGAAAATTTTCGAGGTGAAGCTTAAGGAAATGAAATCGGCATTAACAACCCAGATAACAGAAGAAACTGATATGTCTGAAGTCATAGAAACTGTGAAGCAGCGTGTTAAAGATGCTAAATTGCCAGACGTTGAGGTTGTGCGGATTCTGTGGGATGTCATTATGGATGCAGTGCAGTGGTCTGGTAAGAACCAGCAGCAGAACGCCAATGCAGCTCTGCGCCAGGTGAAAACATGGGCAGAACTGTTGAATACCTTCTGCACCAATGGGAAGCTGGAGCTGGAACTGATTTACAAAGTCCAAATGCAGTGCTATGAGGATGCTAAGCTGATGAAGCTGTTTCCTGAAATTGTGAGGTCCCTCTATGACCAGGATGTGCTTGCAGAAGTCACCATTCTCCATTGGTTCCGCCGAGGAACAAACCCCAAGGGGAGGCAAACTTTTGTGAAGGCTCTGGAGCCATTTGTGAACTGGCTGGAGGAGGCAGAAGAGGAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
W2

Protein Analysis

412

Amino Acids

47.3

Weight (kDa)

5.31

Isoelectric Point (pI)

44.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 37, 92
AciI CCGC 9 cut(s) 37, 49, 71, 92, 346, 619, 667, 877, 1144
AcsI RAATTY 2 cut(s) 336, 741
AcuI CTGAAG 4 cut(s) 147, 380, 635, 834
AcvI CACGTG 1 cut(s) 299
AfaI GTAC 2 cut(s) 226, 279
AfeI AGCGCT 1 cut(s) 453
AfiI CCNNNNNNNGG 6 cut(s) 26, 54, 254, 666, 705, 1167
AflII CTTAAG 1 cut(s) 758
AflIII ACRYGT 1 cut(s) 296
AgsI TTSAA 4 cut(s) 158, 568, 725, 985
AjnI CCWGG 3 cut(s) 232, 957, 1104
Alw21I GWGCWC 1 cut(s) 8
Alw26I GTCTC 1 cut(s) 10
Aor51HI AGCGCT 1 cut(s) 453
AoxI GGCC 2 cut(s) 220, 350
ApeKI GCWGC 5 cut(s) 65, 83, 835, 931, 947
ApoI RAATTY 2 cut(s) 336, 741
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
Asp700I GAANNNNTTC 2 cut(s) 743, 989
AspLEI GCGC 4 cut(s) 70, 264, 454, 957
AspS9I GGNCC 3 cut(s) 76, 103, 1092
AsuHPI GGTGA 6 cut(s) 140, 200, 688, 763, 973, 1117
AvaII GGWCC 3 cut(s) 76, 103, 1092
BanII GRGCYC 1 cut(s) 8
BbrPI CACGTG 1 cut(s) 299
Bbv12I GWGCWC 1 cut(s) 8
BbvI GCAGC 5 cut(s) 77, 95, 847, 943, 959
BccI CCATC 3 cut(s) 273, 322, 664
BceAI ACGGC 1 cut(s) 207
BciT130I CCWGG 3 cut(s) 234, 959, 1106
BcoDI GTCTC 1 cut(s) 10
BfaI CTAG 3 cut(s) 281, 539, 710
BfmI CTRYAG 1 cut(s) 81
BfoI RGCGCY 3 cut(s) 71, 265, 455
BfrI CTTAAG 1 cut(s) 758
BisI GCNGC 6 cut(s) 66, 71, 84, 836, 932, 948
BlpI GCTNAGC 1 cut(s) 1059
BlsI GCNGC 6 cut(s) 67, 72, 85, 837, 933, 949
Bme1390I CCNGG 3 cut(s) 234, 959, 1106
Bme18I GGWCC 3 cut(s) 76, 103, 1092
BmgT120I GGNCC 3 cut(s) 76, 103, 1092
BmiI GGNNCC 4 cut(s) 78, 1094, 1142, 1194
BmrFI CCNGG 3 cut(s) 234, 959, 1106
BmsI GCATC 4 cut(s) 85, 838, 892, 1045
BplI GAGNNNNNCTC 4 cut(s) 7, 39, 668, 700
BpmI CTGGAG 5 cut(s) 237, 665, 1031, 1211, 1232
Bpu1102I GCTNAGC 1 cut(s) 1059
BpuEI CTTGAG 2 cut(s) 163, 497
BsaAI YACGTR 1 cut(s) 299
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 3 cut(s) 699, 1147, 1161
Bsc4I CCNNNNNNNGG 6 cut(s) 26, 54, 254, 666, 705, 1167
Bse1I ACTGG 2 cut(s) 220, 1211
BseBI CCWGG 3 cut(s) 234, 959, 1106
BseDI CCNNGG 3 cut(s) 699, 1147, 1161
BseGI GGATG 7 cut(s) 100, 265, 656, 895, 907, 1060, 1114
BseLI CCNNNNNNNGG 6 cut(s) 26, 54, 254, 666, 705, 1167
BseMII CTCAG 2 cut(s) 479, 678
BseNI ACTGG 2 cut(s) 220, 1211
BseRI GAGGAG 1 cut(s) 1229
BseXI GCAGC 5 cut(s) 77, 95, 847, 943, 959
BsgI GTGCAG 2 cut(s) 929, 979
Bsh1236I CGCG 2 cut(s) 37, 92
BshFI GGCC 2 cut(s) 222, 352
BsiHKAI GWGCWC 1 cut(s) 8
BslFI GGGAC 2 cut(s) 492, 1078
BslI CCNNNNNNNGG 6 cut(s) 26, 54, 254, 666, 705, 1167
BsmAI GTCTC 1 cut(s) 10
BsmFI GGGAC 2 cut(s) 492, 1078
BsmI GAATGC 1 cut(s) 458
BsnI GGCC 2 cut(s) 222, 352
Bso31I GGTCTC 1 cut(s) 10
Bsp1286I GDGCHC 1 cut(s) 8
Bsp143I GATC 3 cut(s) 130, 598, 603
Bsp1720I GCTNAGC 1 cut(s) 1059
BspACI CCGC 9 cut(s) 37, 49, 71, 92, 346, 619, 667, 877, 1144
BspANI GGCC 2 cut(s) 222, 352
BspCNI CTCAG 2 cut(s) 478, 679
BspFNI CGCG 2 cut(s) 37, 92
BspLI GGNNCC 4 cut(s) 78, 1094, 1142, 1194
BspMAI CTGCAG 1 cut(s) 85
BspTI CTTAAG 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 10
BsrI ACTGG 2 cut(s) 220, 1211
BssECI CCNNGG 3 cut(s) 699, 1147, 1161
BssMI GATC 3 cut(s) 130, 598, 603
BssT1I CCWWGG 2 cut(s) 699, 1161
Bst2UI CCWGG 3 cut(s) 234, 959, 1106
Bst4CI ACNGT 4 cut(s) 188, 496, 829, 981
Bst6I CTCTTC 1 cut(s) 1218
BstAFI CTTAAG 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 299
BstC8I GCNNGC 3 cut(s) 35, 456, 1116
BstDEI CTNAG 4 cut(s) 465, 687, 718, 1059
BstF5I GGATG 7 cut(s) 100, 265, 656, 895, 907, 1060, 1114
BstFNI CGCG 2 cut(s) 37, 92
BstH2I RGCGCY 3 cut(s) 71, 265, 455
BstHHI GCGC 4 cut(s) 70, 264, 454, 957
BstKTI GATC 3 cut(s) 133, 601, 606
BstMAI GTCTC 1 cut(s) 10
BstMBI GATC 3 cut(s) 130, 598, 603
BstMWI GCNNNNNNNGC 3 cut(s) 89, 947, 1069
BstNI CCWGG 3 cut(s) 234, 959, 1106
BstSCI CCNGG 3 cut(s) 232, 957, 1104
BstSFI CTRYAG 1 cut(s) 81
BstUI CGCG 2 cut(s) 37, 92
BstV1I GCAGC 5 cut(s) 77, 95, 847, 943, 959
BsuRI GGCC 2 cut(s) 222, 352
BtsCI GGATG 7 cut(s) 100, 265, 656, 895, 907, 1060, 1114
BtsI GCAGTG 4 cut(s) 105, 912, 917, 1049
BtsIMutI CAGTG 5 cut(s) 105, 213, 912, 917, 1049
Cac8I GCNNGC 3 cut(s) 35, 456, 1116
CfoI GCGC 4 cut(s) 70, 264, 454, 957
Cfr13I GGNCC 3 cut(s) 76, 103, 1092
Csp6I GTAC 2 cut(s) 225, 278
CviAII CATG 1 cut(s) 969
CviQI GTAC 2 cut(s) 225, 278
DdeI CTNAG 4 cut(s) 465, 687, 718, 1059
DpnI GATC 3 cut(s) 132, 600, 605
DpnII GATC 3 cut(s) 130, 598, 603
Eam1104I CTCTTC 1 cut(s) 1218
EarI CTCTTC 1 cut(s) 1218
EciI GGCGGA 2 cut(s) 361, 1133
Ecl136II GAGCTC 1 cut(s) 6
Eco130I CCWWGG 2 cut(s) 699, 1161
Eco24I GRGCYC 1 cut(s) 8
Eco31I GGTCTC 1 cut(s) 10
Eco47I GGWCC 3 cut(s) 76, 103, 1092
Eco47III AGCGCT 1 cut(s) 453
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 4 cut(s) 147, 380, 635, 834
Eco72I CACGTG 1 cut(s) 299
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 1092
EcoRII CCWGG 3 cut(s) 232, 957, 1104
EcoT14I CCWWGG 2 cut(s) 699, 1161
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 2 cut(s) 699, 1161
FaeI CATG 1 cut(s) 972
FaiI YATR 9 cut(s) 329, 383, 509, 809, 821, 899, 970, 1050, 1101
FaqI GGGAC 2 cut(s) 492, 1078
FatI CATG 1 cut(s) 968
FauI CCCGC 2 cut(s) 56, 612
Fnu4HI GCNGC 6 cut(s) 66, 71, 84, 836, 932, 948
FokI GGATG 7 cut(s) 107, 252, 643, 902, 914, 1067, 1121
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 6 cut(s) 66, 71, 84, 836, 932, 948
FspBI CTAG 3 cut(s) 281, 539, 710
GlaI GCGC 4 cut(s) 69, 263, 453, 956
GluI GCNGC 6 cut(s) 66, 71, 84, 836, 932, 948
GsuI CTGGAG 5 cut(s) 237, 665, 1031, 1211, 1232
HaeII RGCGCY 3 cut(s) 71, 265, 455
HaeIII GGCC 2 cut(s) 222, 352
HhaI GCGC 4 cut(s) 70, 264, 454, 957
Hin1II CATG 1 cut(s) 972
Hin6I GCGC 4 cut(s) 68, 262, 452, 955
HinP1I GCGC 4 cut(s) 68, 262, 452, 955
HindIII AAGCTT 1 cut(s) 755
HinfI GANTC 4 cut(s) 158, 367, 390, 880
HphI GGTGA 6 cut(s) 140, 200, 688, 763, 973, 1117
Hpy166II GTNNAC 2 cut(s) 227, 1204
Hpy188I TCNGA 8 cut(s) 166, 360, 468, 603, 615, 673, 688, 814
Hpy188III TCNNGA 9 cut(s) 106, 116, 134, 180, 371, 477, 644, 1079, 1190
Hpy8I GTNNAC 2 cut(s) 227, 1204
Hpy99I CGWCG 1 cut(s) 390
HpyAV CCTTC 5 cut(s) 4, 404, 698, 1000, 1177
HpyCH4III ACNGT 4 cut(s) 188, 496, 829, 981
HpyCH4IV ACGT 2 cut(s) 298, 864
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 947, 1069
HpyF3I CTNAG 4 cut(s) 465, 687, 718, 1059
HpySE526I ACGT 2 cut(s) 298, 864
Hsp92II CATG 1 cut(s) 972
HspAI GCGC 4 cut(s) 68, 262, 452, 955
Kzo9I GATC 3 cut(s) 130, 598, 603
LmnI GCTCC 4 cut(s) 259, 406, 1012, 1192
Lsp1109I GCAGC 5 cut(s) 77, 95, 847, 943, 959
LweI GCATC 4 cut(s) 85, 838, 892, 1045
MaeI CTAG 3 cut(s) 281, 539, 710
MaeII ACGT 2 cut(s) 298, 864
MaeIII GTNAC 2 cut(s) 188, 1123
MalI GATC 3 cut(s) 132, 600, 605
MboI GATC 3 cut(s) 130, 598, 603
MboII GAAGA 8 cut(s) 153, 436, 442, 556, 632, 643, 809, 1235
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 4 cut(s) 336, 741, 854, 1083
MmeI TCCRAC 1 cut(s) 384
MroXI GAANNNNTTC 2 cut(s) 743, 989
MseI TTAA 5 cut(s) 42, 171, 759, 779, 843
MspA1I CMGCKG 1 cut(s) 73
MspCI CTTAAG 1 cut(s) 758
MspR9I CCNGG 3 cut(s) 234, 959, 1106
Mva1269I GAATGC 1 cut(s) 458
MvaI CCWGG 3 cut(s) 234, 959, 1106
MvnI CGCG 2 cut(s) 37, 92
MwoI GCNNNNNNNGC 3 cut(s) 89, 947, 1069
NdeII GATC 3 cut(s) 130, 598, 603
NlaIII CATG 1 cut(s) 972
NlaIV GGNNCC 4 cut(s) 78, 1094, 1142, 1194
NmeAIII GCCGAG 1 cut(s) 1172
NmuCI GTSAC 2 cut(s) 188, 1123
PctI GAATGC 1 cut(s) 458
PdmI GAANNNNTTC 2 cut(s) 743, 989
PfeI GAWTC 4 cut(s) 158, 367, 390, 880
PkrI GCNGC 6 cut(s) 67, 72, 85, 837, 933, 949
PmaCI CACGTG 1 cut(s) 299
PmlI CACGTG 1 cut(s) 299
Ppu21I YACGTR 1 cut(s) 299
PpuMI RGGWCCY 1 cut(s) 1092
Psp124BI GAGCTC 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 1092
Psp6I CCWGG 3 cut(s) 232, 957, 1104
PspCI CACGTG 1 cut(s) 299
PspGI CCWGG 3 cut(s) 232, 957, 1104
PspN4I GGNNCC 4 cut(s) 78, 1094, 1142, 1194
PspPI GGNCC 3 cut(s) 76, 103, 1092
PspPPI RGGWCCY 1 cut(s) 1092
PstI CTGCAG 1 cut(s) 85
RsaI GTAC 2 cut(s) 226, 279
RsaNI GTAC 2 cut(s) 225, 278
SacI GAGCTC 1 cut(s) 8
SaqAI TTAA 5 cut(s) 42, 171, 759, 779, 843
SatI GCNGC 6 cut(s) 66, 71, 84, 836, 932, 948
Sau3AI GATC 3 cut(s) 130, 598, 603
Sau96I GGNCC 3 cut(s) 76, 103, 1092
ScrFI CCNGG 3 cut(s) 234, 959, 1106
SduI GDGCHC 1 cut(s) 8
SfaNI GCATC 4 cut(s) 85, 838, 892, 1045
SfcI CTRYAG 1 cut(s) 81
SinI GGWCC 3 cut(s) 76, 103, 1092
SmlI CTYRAG 3 cut(s) 178, 512, 758
SmoI CTYRAG 3 cut(s) 178, 512, 758
Sse9I AATT 4 cut(s) 336, 741, 854, 1083
SsiI CCGC 9 cut(s) 37, 49, 71, 92, 346, 619, 667, 877, 1144
SspI AATATT 1 cut(s) 61
SspMI CTAG 3 cut(s) 281, 539, 710
SstI GAGCTC 1 cut(s) 8
StyD4I CCNGG 3 cut(s) 232, 957, 1104
StyI CCWWGG 2 cut(s) 699, 1161
TaaI ACNGT 4 cut(s) 188, 496, 829, 981
TaiI ACGT 2 cut(s) 301, 867
TaqI TCGA 3 cut(s) 8, 372, 747
TasI AATT 4 cut(s) 336, 741, 854, 1083
TatI WGTACW 1 cut(s) 277
TauI GCSGC 1 cut(s) 73
TfiI GAWTC 4 cut(s) 158, 367, 390, 880
Tru1I TTAA 5 cut(s) 42, 171, 759, 779, 843
Tru9I TTAA 5 cut(s) 42, 171, 759, 779, 843
TscAI CASTG 5 cut(s) 105, 220, 912, 917, 1049
TseFI GTSAC 2 cut(s) 188, 1123
TseI GCWGC 5 cut(s) 65, 83, 835, 931, 947
Tsp45I GTSAC 2 cut(s) 188, 1123
TspDTI ATGAA 4 cut(s) 438, 747, 782, 1082
TspGWI ACGGA 1 cut(s) 70
TspRI CASTG 5 cut(s) 105, 220, 912, 917, 1049
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 3 cut(s) 76, 103, 1092
XapI RAATTY 2 cut(s) 336, 741
XcmI CCANNNNNNNNNTGG 2 cut(s) 1006, 1203
XmnI GAANNNNTTC 2 cut(s) 743, 989
XspI CTAG 3 cut(s) 281, 539, 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.