Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0013306

Physical Location & Seq

Genomic Coordinates Reverse (-)

10319713 .. 10321470

Gene Structure 1758 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G064800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 873 bp

ATGAATGATCAAGGGGCTGGCACAAGCCAAGGAATACAAGATCATGATGATCATGTTGAAGATGAGCAAATCATCCGGGACATCCACGCCTTGACACCACCTCACGCACCGCCGCAGCTGGCTAATCGCGGCCGAAGAAGGGAAGCTTGGGAGACTAGTAGCCATAGATCATCATCCTTGTCCATGGCTAGCTCAGAAGGTGCTCCAAGTGAGAATTTCAGTAGCATAAGTAGAGAGTTCAGTGCTCTAGTGGTTGCAGGATCAGCTATTGGGACTAATAATAGTACCAATGAAAATGATAGTGCTGTAAATCATGGGAACAATAACTTGGGCAGGATTGGAGAGGAGGACAATATGCCTGAGGAGGAACTTAACCCCTTGGCTATAGTACCAGATAATTACAACCCATCGGATCCAATTGCTTCTCCAAGACAAGCTGGGGCTAGGAATTATGCAGTTGGGTCTTCATCAAGCATTGCTGGGACTCAAGATCATCAAGGAGGTGATCAGGTGATTTCTGTGCATAGGGTGAAGAAAGAAGAGGTGGAGACGAAGATATCAGCTTGGCAAAACAACAAGATTGCCAAGCTTAATAACAGGTTTAAGAGGGAGGATGCTATCATTAATGGTTGGGAAAGTGAGCAGGTTCAGAAAGCTTCTTCTTGGATGAAGAAAGTTGAGAGGAAGTTGGAGGAGAAAAGAGCAAGGGCCCTAGAAAAGATGCAGAATGATATAGCCAAAGCTCATAGAAAAGCAGAGGAGAGGAAGGCATCAGCTGAGGCTAAAAGGGGAACAAAAGTGGCAAGAGTTCTTGAAATAGCCAATTTAATGAGAGCTGTTGGAAGAGCACCTGCAAAAAAGTCCTTCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0016020 GO:0023051 GO:0023052 GO:0023057 GO:0032870 GO:0033993 GO:0042221 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071944 GO:0097305 GO:0097306 GO:1900457 GO:1900458 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Remorin_C

Protein Analysis

291

Amino Acids

31.9

Weight (kDa)

7.16

Isoelectric Point (pI)

46.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41870 AT3G57540
fragaria_vesca	FvH4_6g23510
malus_domestica	MD12G1072300.v1.1 MD14G1069500.v1.1
prunus_persica	Prupe.7G064800_v2.0.a1
pyrus_communis	pycom12g06070 pycom14g05760
rosa_chinensis	RchiOBHm_Chr3g0481501
rosa_laevigata	RLG00000023391
rosa_multiflora	Rmu_sc0010846.1_g000007
rosa_roxburghii	Rroxscaffold_6G00400380
rosa_rugosa	Rorug03G0192300
rosa_samantha	Rh3AG243500 Rh3BG278400 Rh3CG273600 Rh3DG270400
rosa_wichuraiana	Rw3G021750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	859
Acc36I	ACCTGC	2 cut(s)	634, 859
AccII	CGCG	1 cut(s)	129
AciI	CCGC	3 cut(s)	110, 113, 129
AclWI	GGATC	3 cut(s)	268, 407, 420
AcoI	YGGCCR	1 cut(s)	130
AcsI	RAATTY	1 cut(s)	214
AfaI	GTAC	2 cut(s)	286, 390
AfiI	CCNNNNNNNGG	1 cut(s)	139
AgsI	TTSAA	2 cut(s)	59, 815
AhlI	ACTAGT	1 cut(s)	155
AjuI	GAANNNNNNNTTGG	4 cut(s)	130, 162, 311, 343
Alw21I	GWGCWC	3 cut(s)	205, 247, 850
Alw26I	GTCTC	2 cut(s)	146, 542
AlwI	GGATC	3 cut(s)	268, 407, 420
AoxI	GGCC	2 cut(s)	130, 708
ApaI	GGGCCC	1 cut(s)	712
ApeKI	GCWGC	1 cut(s)	115
ApoI	RAATTY	1 cut(s)	214
AseI	ATTAAT	1 cut(s)	624
AspS9I	GGNCC	2 cut(s)	708, 709
AsuC2I	CCSGG	1 cut(s)	77
AsuHPI	GGTGA	3 cut(s)	515, 523, 541
AsuNHI	GCTAGC	1 cut(s)	188
AxyI	CCTNAGG	1 cut(s)	360
BaeGI	GKGCMC	1 cut(s)	712
BamHI	GGATCC	1 cut(s)	412
BanII	GRGCYC	1 cut(s)	712
BbsI	GAAGAC	1 cut(s)	456
Bbv12I	GWGCWC	3 cut(s)	205, 247, 850
BbvCI	CCTCAGC	1 cut(s)	777
BbvI	GCAGC	1 cut(s)	127
BccI	CCATC	1 cut(s)	415
BclI	TGATCA	3 cut(s)	7, 49, 505
BcnI	CCSGG	1 cut(s)	77
BcoDI	GTCTC	2 cut(s)	146, 542
BcuI	ACTAGT	1 cut(s)	155
BfaI	CTAG	5 cut(s)	156, 189, 248, 444, 713
BfmI	CTRYAG	1 cut(s)	384
BfuAI	ACCTGC	2 cut(s)	634, 859
BisI	GCNGC	3 cut(s)	113, 116, 130
BlsI	GCNGC	3 cut(s)	114, 117, 131
Bme1390I	CCNGG	1 cut(s)	77
BmgT120I	GGNCC	2 cut(s)	708, 709
BmiI	GGNNCC	2 cut(s)	414, 710
BmrFI	CCNGG	1 cut(s)	77
BmsI	GCATC	3 cut(s)	604, 711, 779
BmtI	GCTAGC	1 cut(s)	192
BpiI	GAAGAC	1 cut(s)	456
Bpu10I	CCTNAGC	1 cut(s)	777
BpuEI	CTTGAG	1 cut(s)	471
BpuMI	CCSGG	1 cut(s)	77
BsaBI	GATNNNNATC	1 cut(s)	172
BsaJI	CCNNGG	3 cut(s)	28, 183, 378
Bsc4I	CCNNNNNNNGG	1 cut(s)	139
Bse21I	CCTNAGG	1 cut(s)	360
Bse3DI	GCAATG	1 cut(s)	474
Bse8I	GATNNNNATC	1 cut(s)	172
BseDI	CCNNGG	3 cut(s)	28, 183, 378
BseGI	GGATG	5 cut(s)	72, 81, 173, 619, 672
BseJI	GATNNNNATC	1 cut(s)	172
BseLI	CCNNNNNNNGG	1 cut(s)	139
BseMI	GCAATG	1 cut(s)	474
BseMII	CTCAG	3 cut(s)	207, 351, 768
BseRI	GAGGAG	4 cut(s)	359, 377, 707, 773
BseSI	GKGCMC	1 cut(s)	712
BseX3I	CGGCCG	1 cut(s)	130
BseXI	GCAGC	1 cut(s)	127
BseYI	CCCAGC	2 cut(s)	437, 479
Bsh1236I	CGCG	1 cut(s)	129
Bsh1285I	CGRYCG	1 cut(s)	133
BshFI	GGCC	2 cut(s)	132, 710
BsiEI	CGRYCG	1 cut(s)	133
BsiHKAI	GWGCWC	3 cut(s)	205, 247, 850
BsiSI	CCGG	1 cut(s)	76
BslFI	GGGAC	3 cut(s)	92, 286, 496
BslI	CCNNNNNNNGG	1 cut(s)	139
BsmAI	GTCTC	2 cut(s)	146, 542
BsmBI	CGTCTC	1 cut(s)	542
BsmFI	GGGAC	3 cut(s)	92, 286, 496
BsnI	GGCC	2 cut(s)	132, 710
Bsp120I	GGGCCC	1 cut(s)	708
Bsp1286I	GDGCHC	4 cut(s)	205, 247, 712, 850
Bsp143I	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
Bsp19I	CCATGG	1 cut(s)	183
BspACI	CCGC	3 cut(s)	110, 113, 129
BspANI	GGCC	2 cut(s)	132, 710
BspCNI	CTCAG	3 cut(s)	206, 352, 769
BspFNI	CGCG	1 cut(s)	129
BspHI	TCATGA	1 cut(s)	43
BspLI	GGNNCC	2 cut(s)	414, 710
BspMI	ACCTGC	2 cut(s)	634, 859
BspOI	GCTAGC	1 cut(s)	192
BspPI	GGATC	3 cut(s)	268, 407, 420
BspQI	GCTCTTC	1 cut(s)	838
BsrDI	GCAATG	1 cut(s)	474
BssECI	CCNNGG	3 cut(s)	28, 183, 378
BssMI	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
BssT1I	CCWWGG	3 cut(s)	28, 183, 378
Bst6I	CTCTTC	2 cut(s)	534, 838
BstC8I	GCNNGC	3 cut(s)	19, 120, 190
BstDEI	CTNAG	3 cut(s)	193, 360, 777
BstDSI	CCRYGG	1 cut(s)	183
BstF5I	GGATG	5 cut(s)	72, 81, 173, 619, 672
BstFNI	CGCG	1 cut(s)	129
BstKTI	GATC	8 cut(s)	10, 43, 52, 170, 263, 415, 493, 508
BstMAI	GTCTC	2 cut(s)	146, 542
BstMBI	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
BstMCI	CGRYCG	1 cut(s)	133
BstMWI	GCNNNNNNNGC	1 cut(s)	263
BstSCI	CCNGG	1 cut(s)	75
BstSFI	CTRYAG	1 cut(s)	384
BstSLI	GKGCMC	1 cut(s)	712
BstUI	CGCG	1 cut(s)	129
BstV1I	GCAGC	1 cut(s)	127
BstV2I	GAAGAC	1 cut(s)	456
BstX2I	RGATCY	1 cut(s)	412
BstYI	RGATCY	1 cut(s)	412
BstZI	CGGCCG	1 cut(s)	130
Bsu36I	CCTNAGG	1 cut(s)	360
BsuRI	GGCC	2 cut(s)	132, 710
BtgI	CCRYGG	1 cut(s)	183
BtsCI	GGATG	5 cut(s)	72, 81, 173, 619, 672
BtsIMutI	CAGTG	1 cut(s)	247
BveI	ACCTGC	2 cut(s)	634, 859
Cac8I	GCNNGC	3 cut(s)	19, 120, 190
CciI	TCATGA	1 cut(s)	43
Cfr13I	GGNCC	2 cut(s)	708, 709
Csp6I	GTAC	2 cut(s)	285, 389
CviAII	CATG	4 cut(s)	44, 53, 184, 314
CviQI	GTAC	2 cut(s)	285, 389
DdeI	CTNAG	3 cut(s)	193, 360, 777
DpnI	GATC	8 cut(s)	9, 42, 51, 169, 262, 414, 492, 507
DpnII	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
EaeI	YGGCCR	1 cut(s)	130
EagI	CGGCCG	1 cut(s)	130
Eam1104I	CTCTTC	2 cut(s)	534, 838
EarI	CTCTTC	2 cut(s)	534, 838
EclXI	CGGCCG	1 cut(s)	130
Eco130I	CCWWGG	3 cut(s)	28, 183, 378
Eco24I	GRGCYC	1 cut(s)	712
Eco32I	GATATC	1 cut(s)	558
Eco52I	CGGCCG	1 cut(s)	130
Eco81I	CCTNAGG	1 cut(s)	360
EcoO109I	RGGNCCY	2 cut(s)	708, 709
EcoRV	GATATC	1 cut(s)	558
EcoT14I	CCWWGG	3 cut(s)	28, 183, 378
EcoT38I	GRGCYC	1 cut(s)	712
ErhI	CCWWGG	3 cut(s)	28, 183, 378
Esp3I	CGTCTC	1 cut(s)	542
FaeI	CATG	4 cut(s)	47, 56, 187, 317
FalI	AAGNNNNNCTT	3 cut(s)	130, 162, 851
FaqI	GGGAC	3 cut(s)	92, 286, 496
FatI	CATG	4 cut(s)	43, 52, 183, 313
FbaI	TGATCA	3 cut(s)	7, 49, 505
Fnu4HI	GCNGC	3 cut(s)	113, 116, 130
FokI	GGATG	5 cut(s)	59, 68, 160, 626, 679
FriOI	GRGCYC	1 cut(s)	712
Fsp4HI	GCNGC	3 cut(s)	113, 116, 130
FspBI	CTAG	5 cut(s)	156, 189, 248, 444, 713
GluI	GCNGC	3 cut(s)	113, 116, 130
GsaI	CCCAGC	2 cut(s)	441, 483
HaeIII	GGCC	2 cut(s)	132, 710
HapII	CCGG	1 cut(s)	76
Hin1II	CATG	4 cut(s)	47, 56, 187, 317
HindIII	AAGCTT	3 cut(s)	144, 587, 654
HinfI	GANTC	1 cut(s)	484
HpaII	CCGG	1 cut(s)	76
HphI	GGTGA	3 cut(s)	515, 523, 541
Hpy188I	TCNGA	3 cut(s)	196, 412, 651
Hpy188III	TCNNGA	3 cut(s)	44, 488, 812
HpyAV	CCTTC	3 cut(s)	132, 191, 760
HpyCH4V	TGCA	5 cut(s)	257, 455, 523, 724, 854
HpyF10VI	GCNNNNNNNGC	1 cut(s)	263
HpyF3I	CTNAG	3 cut(s)	193, 360, 777
Hsp92II	CATG	4 cut(s)	47, 56, 187, 317
Ksp22I	TGATCA	3 cut(s)	7, 49, 505
Kzo9I	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
LguI	GCTCTTC	1 cut(s)	838
LmnI	GCTCC	1 cut(s)	208
Lsp1109I	GCAGC	1 cut(s)	127
LweI	GCATC	3 cut(s)	604, 711, 779
MaeI	CTAG	5 cut(s)	156, 189, 248, 444, 713
MalI	GATC	8 cut(s)	9, 42, 51, 169, 262, 414, 492, 507
MboI	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
MfeI	CAATTG	1 cut(s)	417
MflI	RGATCY	1 cut(s)	412
MhlI	GDGCHC	4 cut(s)	205, 247, 712, 850
MluCI	AATT	5 cut(s)	214, 397, 417, 448, 823
MlyI	GAGTC	1 cut(s)	478
MmeI	TCCRAC	2 cut(s)	669, 820
MseI	TTAA	5 cut(s)	372, 591, 603, 624, 827
MspA1I	CMGCKG	2 cut(s)	118, 776
MspI	CCGG	1 cut(s)	76
MspR9I	CCNGG	1 cut(s)	77
MunI	CAATTG	1 cut(s)	417
MvnI	CGCG	1 cut(s)	129
MwoI	GCNNNNNNNGC	1 cut(s)	263
NciI	CCSGG	1 cut(s)	77
NcoI	CCATGG	1 cut(s)	183
NdeII	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
NheI	GCTAGC	1 cut(s)	188
NlaIII	CATG	4 cut(s)	47, 56, 187, 317
NlaIV	GGNNCC	2 cut(s)	414, 710
PagI	TCATGA	1 cut(s)	43
PaqCI	CACCTGC	1 cut(s)	859
PciSI	GCTCTTC	1 cut(s)	838
PfoI	TCCNGGA	1 cut(s)	75
PkrI	GCNGC	3 cut(s)	114, 117, 131
PleI	GAGTC	1 cut(s)	478
PpsI	GAGTC	1 cut(s)	478
PshBI	ATTAAT	1 cut(s)	624
PspFI	CCCAGC	2 cut(s)	437, 479
PspN4I	GGNNCC	2 cut(s)	414, 710
PspOMI	GGGCCC	1 cut(s)	708
PspPI	GGNCC	2 cut(s)	708, 709
PsuI	RGATCY	1 cut(s)	412
PvuII	CAGCTG	2 cut(s)	118, 776
RsaI	GTAC	2 cut(s)	286, 390
RsaNI	GTAC	2 cut(s)	285, 389
SapI	GCTCTTC	1 cut(s)	838
SaqAI	TTAA	5 cut(s)	372, 591, 603, 624, 827
SatI	GCNGC	3 cut(s)	113, 116, 130
Sau3AI	GATC	8 cut(s)	7, 40, 49, 167, 260, 412, 490, 505
Sau96I	GGNCC	2 cut(s)	708, 709
SchI	GAGTC	1 cut(s)	478
ScrFI	CCNGG	1 cut(s)	77
SduI	GDGCHC	4 cut(s)	205, 247, 712, 850
SfaNI	GCATC	3 cut(s)	604, 711, 779
SfcI	CTRYAG	1 cut(s)	384
SmlI	CTYRAG	1 cut(s)	486
SmoI	CTYRAG	1 cut(s)	486
SpeI	ACTAGT	1 cut(s)	155
Sse9I	AATT	5 cut(s)	214, 397, 417, 448, 823
SsiI	CCGC	3 cut(s)	110, 113, 129
SspMI	CTAG	5 cut(s)	156, 189, 248, 444, 713
StyD4I	CCNGG	1 cut(s)	75
StyI	CCWWGG	3 cut(s)	28, 183, 378
TasI	AATT	5 cut(s)	214, 397, 417, 448, 823
TauI	GCSGC	2 cut(s)	115, 132
Tru1I	TTAA	5 cut(s)	372, 591, 603, 624, 827
Tru9I	TTAA	5 cut(s)	372, 591, 603, 624, 827
TscAI	CASTG	1 cut(s)	247
TseI	GCWGC	1 cut(s)	115
TspDTI	ATGAA	4 cut(s)	17, 306, 456, 683
TspRI	CASTG	1 cut(s)	247
VspI	ATTAAT	1 cut(s)	624
XapI	RAATTY	1 cut(s)	214
XspI	CTAG	5 cut(s)	156, 189, 248, 444, 713

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.