Prupe.7G077400_v2.0.a1

DnaJ molecular chaperone homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0009153
Physical Location & Seq
Forward (+)
11377165 .. 11381039
3875 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G077400.1

Sequence Viewer

Length: 765 bp
ATGAATAGAGGCATGAAAGCGGCTCTCACGAACTCAAAACTCAACTGCTGCATTTATGTGAGGGCTGCCCTCTTTCATTCTACCCCCGTCTTGGATCGCAAGAGACGCAACTATTGGGAACCTAGATTCAACAACCATTCAAGAAGGTCCAGAAGGAACCATGCAAAGCAAACATTACTGCGCAATGTCAATGCTTATGCAGACTTCTTATTTCAGAGTTGGCAGAAGGAGTACGATGAGGATGAGCCCTCTTCTAGCAAAGGCACCTCATGGTTTAAAAAGCAATACTCAGCCAAGGGATCCAAAAAGAATGGGGGAGGCAATCAAGGAGCCTGGAGTTCCGGCAGAAGAGGTTTCCAGTGCTTTGAAGAAGATATAGATGTGGAGACCATTTTCCGATCCACGTTTGGTGGAACCAAATTCTATTATTGGTCGTTCATTGATGAAGAGAGTTCGCAGTGGAGGAGCTCTTCAAATCACTCTAACTATGGTAGGTCCTGGAATTGGAGACAACAGAATAAGGAAGAATATGAAACTGAGTCTGAGTCCGAGTCTGAAAGGTCTGAGTCAGATGAAAGGTTGGCCCTCGGATTGAGTGCTTCTGGCCCTCTAACACTTGAAGATGTCAAGAATGCATACCGAATCTCTGCGCTGAAATGGCATCCAGATCGTCACCAGGGCTCTTCCAAGGCTGCTGCGGAGGAAAAGTTCAAGCTTTGCAGTGCGGCATATCAATCTTTATGTGATAAACTGGCTGTGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

255

Amino Acids

29.43

Weight (kDa)

9.18

Isoelectric Point (pI)

60.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 182
AccB1I GGYRCC 1 cut(s) 263
AciI CCGC 3 cut(s) 20, 698, 725
AclWI GGATC 4 cut(s) 102, 294, 307, 393
AcsI RAATTY 1 cut(s) 419
AfaI GTAC 1 cut(s) 233
AfiI CCNNNNNNNGG 2 cut(s) 91, 504
AgsI TTSAA 6 cut(s) 130, 141, 368, 474, 620, 712
AjnI CCWGG 3 cut(s) 332, 497, 675
AloI GAACNNNNNNTCC 2 cut(s) 692, 724
AluBI AGCT 2 cut(s) 468, 715
AluI AGCT 2 cut(s) 468, 715
Alw21I GWGCWC 1 cut(s) 470
Alw26I GTCTC 3 cut(s) 97, 380, 502
AlwI GGATC 4 cut(s) 102, 294, 307, 393
AoxI GGCC 2 cut(s) 582, 604
ApeKI GCWGC 4 cut(s) 48, 65, 692, 695
ApoI RAATTY 1 cut(s) 419
AspLEI GCGC 2 cut(s) 183, 652
AspS9I GGNCC 4 cut(s) 147, 495, 583, 605
AsuHPI GGTGA 1 cut(s) 665
AvaII GGWCC 2 cut(s) 147, 495
BamHI GGATCC 1 cut(s) 299
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 3 cut(s) 249, 470, 683
Bbv12I GWGCWC 1 cut(s) 470
BbvI GCAGC 4 cut(s) 35, 52, 679, 682
BcgI CGANNNNNNTGC 2 cut(s) 650, 684
BciT130I CCWGG 3 cut(s) 334, 499, 677
BcoDI GTCTC 3 cut(s) 97, 380, 502
BfaI CTAG 2 cut(s) 123, 255
BisI GCNGC 6 cut(s) 21, 49, 66, 693, 696, 726
BlsI GCNGC 6 cut(s) 22, 50, 67, 694, 697, 727
Bme1390I CCNGG 3 cut(s) 334, 499, 677
Bme18I GGWCC 2 cut(s) 147, 495
BmgT120I GGNCC 4 cut(s) 147, 495, 583, 605
BmiI GGNNCC 6 cut(s) 120, 158, 265, 301, 331, 415
BmrFI CCNGG 3 cut(s) 334, 499, 677
BmsI GCATC 1 cut(s) 670
BpmI CTGGAG 1 cut(s) 355
BsaI GGTCTC 1 cut(s) 380
BsaJI CCNNGG 4 cut(s) 294, 586, 676, 687
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 2 cut(s) 91, 504
Bse1I ACTGG 2 cut(s) 358, 756
Bse3DI GCAATG 1 cut(s) 190
BseBI CCWGG 3 cut(s) 334, 499, 677
BseDI CCNNGG 4 cut(s) 294, 586, 676, 687
BseGI GGATG 2 cut(s) 247, 661
BseLI CCNNNNNNNGG 2 cut(s) 91, 504
BseMI GCAATG 1 cut(s) 190
BseMII CTCAG 4 cut(s) 303, 528, 534, 555
BseNI ACTGG 2 cut(s) 358, 756
BseRI GAGGAG 1 cut(s) 478
BseXI GCAGC 4 cut(s) 35, 52, 679, 682
BshFI GGCC 2 cut(s) 584, 606
BshNI GGYRCC 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 470
BsiSI CCGG 1 cut(s) 342
BslI CCNNNNNNNGG 2 cut(s) 91, 504
BsmAI GTCTC 3 cut(s) 97, 380, 502
BsmBI CGTCTC 1 cut(s) 97
BsmI GAATGC 1 cut(s) 637
BsnI GGCC 2 cut(s) 584, 606
Bso31I GGTCTC 1 cut(s) 380
Bsp1286I GDGCHC 3 cut(s) 249, 470, 683
Bsp143I GATC 4 cut(s) 94, 299, 398, 667
BspACI CCGC 3 cut(s) 20, 698, 725
BspANI GGCC 2 cut(s) 584, 606
BspCNI CTCAG 4 cut(s) 302, 529, 535, 556
BspLI GGNNCC 6 cut(s) 120, 158, 265, 301, 331, 415
BspPI GGATC 4 cut(s) 102, 294, 307, 393
BspQI GCTCTTC 2 cut(s) 475, 688
BspT107I GGYRCC 1 cut(s) 263
BspTNI GGTCTC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 190
BsrI ACTGG 2 cut(s) 358, 756
BssECI CCNNGG 4 cut(s) 294, 586, 676, 687
BssMI GATC 4 cut(s) 94, 299, 398, 667
BssT1I CCWWGG 2 cut(s) 294, 687
Bst2UI CCWGG 3 cut(s) 334, 499, 677
Bst6I CTCTTC 5 cut(s) 256, 343, 441, 475, 688
BstDEI CTNAG 4 cut(s) 289, 537, 543, 564
BstF5I GGATG 2 cut(s) 247, 661
BstHHI GCGC 2 cut(s) 183, 652
BstKTI GATC 4 cut(s) 97, 302, 401, 670
BstMAI GTCTC 3 cut(s) 97, 380, 502
BstMBI GATC 4 cut(s) 94, 299, 398, 667
BstMWI GCNNNNNNNGC 2 cut(s) 105, 658
BstNI CCWGG 3 cut(s) 334, 499, 677
BstSCI CCNGG 3 cut(s) 332, 497, 675
BstV1I GCAGC 4 cut(s) 35, 52, 679, 682
BstX2I RGATCY 1 cut(s) 299
BstYI RGATCY 1 cut(s) 299
BsuRI GGCC 2 cut(s) 584, 606
BtsCI GGATG 2 cut(s) 247, 661
BtsI GCAGTG 2 cut(s) 464, 727
BtsIMutI CAGTG 3 cut(s) 365, 464, 727
CfoI GCGC 2 cut(s) 183, 652
Cfr13I GGNCC 4 cut(s) 147, 495, 583, 605
CseI GACGC 1 cut(s) 114
Csp6I GTAC 1 cut(s) 232
CviAII CATG 3 cut(s) 13, 161, 270
CviQI GTAC 1 cut(s) 232
DdeI CTNAG 4 cut(s) 289, 537, 543, 564
DpnI GATC 4 cut(s) 96, 301, 400, 669
DpnII GATC 4 cut(s) 94, 299, 398, 667
DraI TTTAAA 1 cut(s) 277
Eam1104I CTCTTC 5 cut(s) 256, 343, 441, 475, 688
EarI CTCTTC 5 cut(s) 256, 343, 441, 475, 688
Ecl136II GAGCTC 1 cut(s) 468
Eco130I CCWWGG 2 cut(s) 294, 687
Eco24I GRGCYC 3 cut(s) 249, 470, 683
Eco31I GGTCTC 1 cut(s) 380
Eco47I GGWCC 2 cut(s) 147, 495
Eco53kI GAGCTC 1 cut(s) 468
EcoICRI GAGCTC 1 cut(s) 468
EcoO109I RGGNCCY 1 cut(s) 495
EcoRII CCWGG 3 cut(s) 332, 497, 675
EcoT14I CCWWGG 2 cut(s) 294, 687
EcoT22I ATGCAT 1 cut(s) 637
EcoT38I GRGCYC 3 cut(s) 249, 470, 683
ErhI CCWWGG 2 cut(s) 294, 687
Esp3I CGTCTC 1 cut(s) 97
FaeI CATG 3 cut(s) 16, 164, 273
FatI CATG 3 cut(s) 12, 160, 269
Fnu4HI GCNGC 6 cut(s) 21, 49, 66, 693, 696, 726
FokI GGATG 2 cut(s) 254, 648
FriOI GRGCYC 3 cut(s) 249, 470, 683
Fsp4HI GCNGC 6 cut(s) 21, 49, 66, 693, 696, 726
FspBI CTAG 2 cut(s) 123, 255
FspI TGCGCA 1 cut(s) 182
GlaI GCGC 2 cut(s) 182, 651
GluI GCNGC 6 cut(s) 21, 49, 66, 693, 696, 726
GsuI CTGGAG 1 cut(s) 355
HaeIII GGCC 2 cut(s) 584, 606
HapII CCGG 1 cut(s) 342
HgaI GACGC 1 cut(s) 114
HhaI GCGC 2 cut(s) 183, 652
Hin1II CATG 3 cut(s) 16, 164, 273
Hin6I GCGC 2 cut(s) 181, 650
HinP1I GCGC 2 cut(s) 181, 650
HindIII AAGCTT 1 cut(s) 713
HinfI GANTC 6 cut(s) 126, 539, 545, 551, 566, 642
HpaII CCGG 1 cut(s) 342
HphI GGTGA 1 cut(s) 665
Hpy166II GTNNAC 1 cut(s) 760
Hpy188I TCNGA 8 cut(s) 216, 398, 544, 550, 556, 565, 571, 590
Hpy188III TCNNGA 5 cut(s) 28, 141, 150, 628, 665
Hpy8I GTNNAC 1 cut(s) 760
HpyAV CCTTC 3 cut(s) 138, 147, 220
HpyCH4IV ACGT 1 cut(s) 404
HpyCH4V TGCA 5 cut(s) 51, 164, 200, 635, 720
HpyF10VI GCNNNNNNNGC 2 cut(s) 105, 658
HpyF3I CTNAG 4 cut(s) 289, 537, 543, 564
HpySE526I ACGT 1 cut(s) 404
Hsp92II CATG 3 cut(s) 16, 164, 273
HspAI GCGC 2 cut(s) 181, 650
Kzo9I GATC 4 cut(s) 94, 299, 398, 667
LguI GCTCTTC 2 cut(s) 475, 688
LmnI GCTCC 2 cut(s) 329, 465
Lsp1109I GCAGC 4 cut(s) 35, 52, 679, 682
LweI GCATC 1 cut(s) 670
MaeI CTAG 2 cut(s) 123, 255
MaeII ACGT 1 cut(s) 404
MaeIII GTNAC 1 cut(s) 671
MalI GATC 4 cut(s) 96, 301, 400, 669
MboI GATC 4 cut(s) 94, 299, 398, 667
MboII GAAGA 9 cut(s) 243, 360, 380, 383, 458, 462, 536, 632, 675
MflI RGATCY 1 cut(s) 299
MhlI GDGCHC 3 cut(s) 249, 470, 683
MluCI AATT 2 cut(s) 419, 502
MlyI GAGTC 4 cut(s) 548, 554, 560, 575
Mph1103I ATGCAT 1 cut(s) 637
MseI TTAA 1 cut(s) 276
MslI CAYNNNNRTG 1 cut(s) 56
MspI CCGG 1 cut(s) 342
MspR9I CCNGG 3 cut(s) 334, 499, 677
Mva1269I GAATGC 1 cut(s) 637
MvaI CCWGG 3 cut(s) 334, 499, 677
MwoI GCNNNNNNNGC 2 cut(s) 105, 658
NdeII GATC 4 cut(s) 94, 299, 398, 667
NlaIII CATG 3 cut(s) 16, 164, 273
NlaIV GGNNCC 6 cut(s) 120, 158, 265, 301, 331, 415
NmuCI GTSAC 1 cut(s) 671
NsbI TGCGCA 1 cut(s) 182
NsiI ATGCAT 1 cut(s) 637
PciSI GCTCTTC 2 cut(s) 475, 688
PctI GAATGC 1 cut(s) 637
PfeI GAWTC 2 cut(s) 126, 642
PfoI TCCNGGA 1 cut(s) 497
PkrI GCNGC 6 cut(s) 22, 50, 67, 694, 697, 727
PleI GAGTC 4 cut(s) 547, 553, 559, 574
PpsI GAGTC 4 cut(s) 547, 553, 559, 574
PpuMI RGGWCCY 1 cut(s) 495
Psp124BI GAGCTC 1 cut(s) 470
Psp5II RGGWCCY 1 cut(s) 495
Psp6I CCWGG 3 cut(s) 332, 497, 675
PspGI CCWGG 3 cut(s) 332, 497, 675
PspN4I GGNNCC 6 cut(s) 120, 158, 265, 301, 331, 415
PspPI GGNCC 4 cut(s) 147, 495, 583, 605
PspPPI RGGWCCY 1 cut(s) 495
PsuI RGATCY 1 cut(s) 299
RsaI GTAC 1 cut(s) 233
RsaNI GTAC 1 cut(s) 232
RseI CAYNNNNRTG 1 cut(s) 56
SacI GAGCTC 1 cut(s) 470
SapI GCTCTTC 2 cut(s) 475, 688
SaqAI TTAA 1 cut(s) 276
SatI GCNGC 6 cut(s) 21, 49, 66, 693, 696, 726
Sau3AI GATC 4 cut(s) 94, 299, 398, 667
Sau96I GGNCC 4 cut(s) 147, 495, 583, 605
SchI GAGTC 4 cut(s) 548, 554, 560, 575
ScrFI CCNGG 3 cut(s) 334, 499, 677
SduI GDGCHC 3 cut(s) 249, 470, 683
SfaNI GCATC 1 cut(s) 670
SinI GGWCC 2 cut(s) 147, 495
SmiMI CAYNNNNRTG 1 cut(s) 56
Sse9I AATT 2 cut(s) 419, 502
SsiI CCGC 3 cut(s) 20, 698, 725
SspMI CTAG 2 cut(s) 123, 255
SstI GAGCTC 1 cut(s) 470
StyD4I CCNGG 3 cut(s) 332, 497, 675
StyI CCWWGG 2 cut(s) 294, 687
TaiI ACGT 1 cut(s) 407
TasI AATT 2 cut(s) 419, 502
TauI GCSGC 2 cut(s) 23, 728
TfiI GAWTC 2 cut(s) 126, 642
Tru1I TTAA 1 cut(s) 276
Tru9I TTAA 1 cut(s) 276
TscAI CASTG 3 cut(s) 365, 464, 727
TseFI GTSAC 1 cut(s) 671
TseI GCWGC 4 cut(s) 48, 65, 692, 695
Tsp45I GTSAC 1 cut(s) 671
TspDTI ATGAA 7 cut(s) 17, 29, 65, 427, 459, 546, 588
TspRI CASTG 3 cut(s) 365, 464, 727
VpaK11BI GGWCC 2 cut(s) 147, 495
XapI RAATTY 1 cut(s) 419
XspI CTAG 2 cut(s) 123, 255
Zsp2I ATGCAT 1 cut(s) 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.