Prupe.7G098700_v2.0.a1

Encoded by

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
12982458 .. 12983530
1073 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G098700.1

Sequence Viewer

Length: 852 bp
ATGTCTTCACCCGACCCGGCACAGCGCCCTCTGCCCATAGGCATCCTGACCCGGTCGGTCTGGTCCGATAACCTCGACTCCGAGTTCGAACTGATCCGGTCCGTCATCGACGATTACCCGCTGATTTCAATGGACACCGAGTTTCCGGGCGTCGTTGTCCGACCCGACCCTAACGACCCGACTCTCCGGCACCGGGAACCCGACGCGCACTACCTCATGCTCAAGGCCAACGTCGATCGTCTTAATCTTATTCAAGTCGGTCTCACGCTCTCGGACGGCAATGGCAATTTGCCGAATTTGGGCACCGAGAATATGTATATTTGGGAATTCAATTTCCGGGACTTCGACGTGGCGCGAGACCCCCACGCGCACGACTCGGTGGAGTTGCTTCGGCGGCAGGGGATCGATTTCGACCGGAACCGGGATTTCGGGGTCGACTCGGTGCGGTTCGCCGAGCTGATGATGTCATCGGGGCTCGTTTGCAACAACGACGTAAATTGGGTCACGTTCCATAGCGCTTACGATTTTGGGTACCTAGTCAAGGTGTTGACTCAGCGAGTCTTGCCGGAAAAGCTGCCCGAGTTCTTAAATTATGTGAGGGTGTTTTTCGGGTCTGGAGTTTACGACGTGAAACACCTGACGAAGTTCTGTGCCGGCCTATATGGTGGGCTGGACCGGATCTGCCAGACCCTGAACGTGAGTCGGGTTATCGGGAAGACCCACCAGGCCGGATCGGATAGCTTGTTGACCTTGCACGCGTTCCAGAGGATCAGAAAGGACTACTTTTCCAAGGATGGCAAGGACTTCATTGAGAAGTTCGCCGGCGTTTTGTATGGTCTAGAGGTTTCTTGA

Protein Analysis

284

Amino Acids

32.23

Weight (kDa)

5.36

Isoelectric Point (pI)

32.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 531
AccB1I GGYRCC 3 cut(s) 189, 302, 531
AccI GTMKAC 1 cut(s) 435
AccII CGCG 4 cut(s) 206, 355, 368, 758
AciI CCGC 3 cut(s) 119, 394, 445
AclWI GGATC 5 cut(s) 88, 410, 686, 739, 776
AcsI RAATTY 2 cut(s) 295, 326
AcyI GRCGYC 1 cut(s) 150
AfaI GTAC 1 cut(s) 533
AfeI AGCGCT 1 cut(s) 517
AfiI CCNNNNNNNGG 4 cut(s) 193, 299, 421, 541
AflIII ACRYGT 1 cut(s) 756
AgsI TTSAA 3 cut(s) 129, 254, 331
AjiI CACGTC 2 cut(s) 349, 628
AjnI CCWGG 1 cut(s) 723
AluBI AGCT 3 cut(s) 457, 574, 741
AluI AGCT 3 cut(s) 457, 574, 741
Alw26I GTCTC 2 cut(s) 266, 351
AlwI GGATC 5 cut(s) 88, 410, 686, 739, 776
AlwNI CAGNNNCTG 1 cut(s) 691
Ama87I CYCGRG 1 cut(s) 578
Aor51HI AGCGCT 1 cut(s) 517
AoxI GGCC 3 cut(s) 225, 655, 726
ApeKI GCWGC 1 cut(s) 574
ApoI RAATTY 2 cut(s) 295, 326
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
Asp718I GGTACC 1 cut(s) 531
AspLEI GCGC 5 cut(s) 27, 208, 355, 370, 518
AspS9I GGNCC 3 cut(s) 63, 99, 673
AsuC2I CCSGG 6 cut(s) 17, 52, 147, 194, 338, 422
AsuII TTCGAA 1 cut(s) 87
AvaI CYCGRG 1 cut(s) 578
AvaII GGWCC 3 cut(s) 63, 99, 673
BaeGI GKGCMC 1 cut(s) 305
BanI GGYRCC 3 cut(s) 189, 302, 531
BanII GRGCYC 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 722
BbvI GCAGC 1 cut(s) 561
BccI CCATC 1 cut(s) 788
BceAI ACGGC 1 cut(s) 292
BciT130I CCWGG 1 cut(s) 725
BcnI CCSGG 6 cut(s) 17, 52, 147, 194, 338, 422
BcoDI GTCTC 2 cut(s) 266, 351
BfaI CTAG 2 cut(s) 536, 839
BfoI RGCGCY 2 cut(s) 28, 519
BisI GCNGC 2 cut(s) 395, 575
BlsI GCNGC 2 cut(s) 396, 576
Bme1390I CCNGG 7 cut(s) 17, 52, 147, 194, 338, 422, 725
Bme18I GGWCC 3 cut(s) 63, 99, 673
BmeT110I CYCGRG 1 cut(s) 578
BmgBI CACGTC 2 cut(s) 349, 628
BmgT120I GGNCC 3 cut(s) 63, 99, 673
BmiI GGNNCC 5 cut(s) 191, 198, 304, 419, 533
BmrFI CCNGG 7 cut(s) 17, 52, 147, 194, 338, 422, 725
BmsI GCATC 1 cut(s) 51
BpiI GAAGAC 1 cut(s) 722
BpmI CTGGAG 1 cut(s) 636
Bpu14I TTCGAA 1 cut(s) 87
BpuEI CTTGAG 1 cut(s) 206
BpuMI CCSGG 6 cut(s) 17, 52, 147, 194, 338, 422
Bsa29I ATCGAT 1 cut(s) 405
BsaHI GRCGYC 1 cut(s) 150
BsaI GGTCTC 2 cut(s) 266, 351
BsaJI CCNNGG 1 cut(s) 789
BsaWI WCCGGW 3 cut(s) 96, 414, 675
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 4 cut(s) 193, 299, 421, 541
Bse118I RCCGGY 2 cut(s) 653, 821
Bse3DI GCAATG 1 cut(s) 286
BseBI CCWGG 1 cut(s) 725
BseCI ATCGAT 1 cut(s) 405
BseDI CCNNGG 1 cut(s) 789
BseGI GGATG 2 cut(s) 42, 799
BseLI CCNNNNNNNGG 4 cut(s) 193, 299, 421, 541
BseMI GCAATG 1 cut(s) 286
BseMII CTCAG 1 cut(s) 566
BseSI GKGCMC 1 cut(s) 305
BseXI GCAGC 1 cut(s) 561
Bsh1236I CGCG 4 cut(s) 206, 355, 368, 758
Bsh1285I CGRYCG 3 cut(s) 56, 238, 415
BshFI GGCC 3 cut(s) 227, 657, 728
BshNI GGYRCC 3 cut(s) 189, 302, 531
BshVI ATCGAT 1 cut(s) 405
BsiEI CGRYCG 3 cut(s) 56, 238, 415
BsiHKCI CYCGRG 1 cut(s) 578
BslFI GGGAC 1 cut(s) 353
BslI CCNNNNNNNGG 4 cut(s) 193, 299, 421, 541
BsmAI GTCTC 2 cut(s) 266, 351
BsmFI GGGAC 1 cut(s) 353
BsnI GGCC 3 cut(s) 227, 657, 728
Bso31I GGTCTC 2 cut(s) 266, 351
BsoBI CYCGRG 1 cut(s) 578
Bsp119I TTCGAA 1 cut(s) 87
Bsp1286I GDGCHC 2 cut(s) 305, 477
Bsp143I GATC 6 cut(s) 93, 235, 402, 678, 731, 768
BspACI CCGC 3 cut(s) 119, 394, 445
BspANI GGCC 3 cut(s) 227, 657, 728
BspCNI CTCAG 1 cut(s) 565
BspDI ATCGAT 1 cut(s) 405
BspFNI CGCG 4 cut(s) 206, 355, 368, 758
BspLI GGNNCC 5 cut(s) 191, 198, 304, 419, 533
BspPI GGATC 5 cut(s) 88, 410, 686, 739, 776
BspT104I TTCGAA 1 cut(s) 87
BspT107I GGYRCC 3 cut(s) 189, 302, 531
BspTNI GGTCTC 2 cut(s) 266, 351
BsrDI GCAATG 1 cut(s) 286
BsrFI RCCGGY 2 cut(s) 653, 821
BssAI RCCGGY 2 cut(s) 653, 821
BssECI CCNNGG 1 cut(s) 789
BssMI GATC 6 cut(s) 93, 235, 402, 678, 731, 768
BssNI GRCGYC 1 cut(s) 150
BssT1I CCWWGG 1 cut(s) 789
Bst2UI CCWGG 1 cut(s) 725
BstACI GRCGYC 1 cut(s) 150
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 3 cut(s) 655, 756, 823
BstDEI CTNAG 1 cut(s) 552
BstENI CCTNNNNNAGG 1 cut(s) 539
BstF5I GGATG 2 cut(s) 42, 799
BstFNI CGCG 4 cut(s) 206, 355, 368, 758
BstH2I RGCGCY 2 cut(s) 28, 519
BstHHI GCGC 5 cut(s) 27, 208, 355, 370, 518
BstKTI GATC 6 cut(s) 96, 238, 405, 681, 734, 771
BstMAI GTCTC 2 cut(s) 266, 351
BstMBI GATC 6 cut(s) 93, 235, 402, 678, 731, 768
BstMCI CGRYCG 3 cut(s) 56, 238, 415
BstMWI GCNNNNNNNGC 4 cut(s) 31, 394, 562, 571
BstNI CCWGG 1 cut(s) 725
BstSCI CCNGG 7 cut(s) 15, 50, 145, 192, 336, 420, 723
BstSLI GKGCMC 1 cut(s) 305
BstUI CGCG 4 cut(s) 206, 355, 368, 758
BstV1I GCAGC 1 cut(s) 561
BstV2I GAAGAC 1 cut(s) 722
BstX2I RGATCY 1 cut(s) 678
BstYI RGATCY 1 cut(s) 678
Bsu15I ATCGAT 1 cut(s) 405
BsuRI GGCC 3 cut(s) 227, 657, 728
BsuTUI ATCGAT 1 cut(s) 405
BtrI CACGTC 2 cut(s) 349, 628
BtsCI GGATG 2 cut(s) 42, 799
Cac8I GCNNGC 3 cut(s) 655, 756, 823
CaiI CAGNNNCTG 1 cut(s) 691
CfoI GCGC 5 cut(s) 27, 208, 355, 370, 518
Cfr10I RCCGGY 2 cut(s) 653, 821
Cfr13I GGNCC 3 cut(s) 63, 99, 673
ClaI ATCGAT 1 cut(s) 405
CpoI CGGWCCG 1 cut(s) 99
CseI GACGC 2 cut(s) 139, 212
Csp6I GTAC 1 cut(s) 532
CspI CGGWCCG 1 cut(s) 99
CviAII CATG 1 cut(s) 217
CviJI RGCY 8 cut(s) 227, 457, 475, 574, 657, 670, 728, 741
CviKI_1 RGCY 8 cut(s) 227, 457, 475, 574, 657, 670, 728, 741
CviQI GTAC 1 cut(s) 532
DdeI CTNAG 1 cut(s) 552
DpnI GATC 6 cut(s) 95, 237, 404, 680, 733, 770
DpnII GATC 6 cut(s) 93, 235, 402, 678, 731, 768
Eco130I CCWWGG 1 cut(s) 789
Eco24I GRGCYC 1 cut(s) 477
Eco31I GGTCTC 2 cut(s) 266, 351
Eco47I GGWCC 3 cut(s) 63, 99, 673
Eco47III AGCGCT 1 cut(s) 517
Eco88I CYCGRG 1 cut(s) 578
EcoNI CCTNNNNNAGG 1 cut(s) 539
EcoRI GAATTC 1 cut(s) 326
EcoRII CCWGG 1 cut(s) 723
EcoT14I CCWWGG 1 cut(s) 789
EcoT38I GRGCYC 1 cut(s) 477
ErhI CCWWGG 1 cut(s) 789
FaeI CATG 1 cut(s) 220
FaiI YATR 9 cut(s) 38, 218, 314, 318, 513, 594, 661, 663, 834
FalI AAGNNNNNCTT 2 cut(s) 767, 799
FaqI GGGAC 1 cut(s) 353
FatI CATG 1 cut(s) 216
FauI CCCGC 1 cut(s) 126
FblI GTMKAC 1 cut(s) 435
Fnu4HI GCNGC 2 cut(s) 395, 575
FokI GGATG 2 cut(s) 29, 806
FriOI GRGCYC 1 cut(s) 477
Fsp4HI GCNGC 2 cut(s) 395, 575
FspBI CTAG 2 cut(s) 536, 839
GlaI GCGC 5 cut(s) 26, 207, 354, 369, 517
GluI GCNGC 2 cut(s) 395, 575
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 2 cut(s) 28, 519
HaeIII GGCC 3 cut(s) 227, 657, 728
HgaI GACGC 2 cut(s) 139, 212
HhaI GCGC 5 cut(s) 27, 208, 355, 370, 518
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 1 cut(s) 220
Hin6I GCGC 5 cut(s) 25, 206, 353, 368, 516
HinP1I GCGC 5 cut(s) 25, 206, 353, 368, 516
HincII GTYRAC 3 cut(s) 436, 549, 747
HindII GTYRAC 3 cut(s) 436, 549, 747
HinfI GANTC 7 cut(s) 77, 181, 374, 437, 550, 558, 700
Hpy166II GTNNAC 4 cut(s) 436, 549, 622, 747
Hpy188I TCNGA 6 cut(s) 67, 82, 161, 274, 736, 773
Hpy188III TCNNGA 6 cut(s) 46, 615, 712, 763, 839, 849
Hpy8I GTNNAC 4 cut(s) 436, 549, 622, 747
Hpy99I CGWCG 7 cut(s) 113, 155, 206, 236, 350, 494, 629
HpyCH4IV ACGT 6 cut(s) 231, 348, 492, 506, 627, 696
HpyCH4V TGCA 2 cut(s) 483, 754
HpyF10VI GCNNNNNNNGC 4 cut(s) 31, 394, 562, 571
HpyF3I CTNAG 1 cut(s) 552
HpySE526I ACGT 6 cut(s) 231, 348, 492, 506, 627, 696
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 1 cut(s) 220
HspAI GCGC 5 cut(s) 25, 206, 353, 368, 516
KpnI GGTACC 1 cut(s) 535
KroI GCCGGC 2 cut(s) 653, 821
KroNI GCCGGC 2 cut(s) 655, 823
Kzo9I GATC 6 cut(s) 93, 235, 402, 678, 731, 768
Lsp1109I GCAGC 1 cut(s) 561
LweI GCATC 1 cut(s) 51
MaeI CTAG 2 cut(s) 536, 839
MaeII ACGT 6 cut(s) 231, 348, 492, 506, 627, 696
MaeIII GTNAC 1 cut(s) 502
MalI GATC 6 cut(s) 95, 237, 404, 680, 733, 770
MboI GATC 6 cut(s) 93, 235, 402, 678, 731, 768
MboII GAAGA 1 cut(s) 727
MflI RGATCY 1 cut(s) 678
MhlI GDGCHC 2 cut(s) 305, 477
MluCI AATT 6 cut(s) 286, 295, 326, 331, 496, 589
MluI ACGCGT 1 cut(s) 756
MlyI GAGTC 7 cut(s) 71, 175, 368, 431, 544, 567, 709
MmeI TCCRAC 1 cut(s) 184
MnlI CCTC 6 cut(s) 39, 83, 224, 591, 759, 835
MreI CGCCGGCG 1 cut(s) 821
MroNI GCCGGC 2 cut(s) 653, 821
MseI TTAA 2 cut(s) 243, 587
MspA1I CMGCKG 1 cut(s) 121
MspR9I CCNGG 7 cut(s) 17, 52, 147, 194, 338, 422, 725
MvaI CCWGG 1 cut(s) 725
MvnI CGCG 4 cut(s) 206, 355, 368, 758
MwoI GCNNNNNNNGC 4 cut(s) 31, 394, 562, 571
NaeI GCCGGC 2 cut(s) 655, 823
NciI CCSGG 6 cut(s) 17, 52, 147, 194, 338, 422
NdeII GATC 6 cut(s) 93, 235, 402, 678, 731, 768
NgoMIV GCCGGC 2 cut(s) 653, 821
NlaIII CATG 1 cut(s) 220
NlaIV GGNNCC 5 cut(s) 191, 198, 304, 419, 533
NmeAIII GCCGAG 1 cut(s) 478
NmuCI GTSAC 1 cut(s) 502
NspV TTCGAA 1 cut(s) 87
PdiI GCCGGC 2 cut(s) 655, 823
PflFI GACNNNGTC 1 cut(s) 52
PfoI TCCNGGA 1 cut(s) 336
PkrI GCNGC 2 cut(s) 396, 576
Ple19I CGATCG 1 cut(s) 238
PleI GAGTC 7 cut(s) 71, 175, 368, 431, 544, 566, 708
PpsI GAGTC 7 cut(s) 71, 175, 368, 431, 544, 566, 708
Psp6I CCWGG 1 cut(s) 723
PspGI CCWGG 1 cut(s) 723
PspN4I GGNNCC 5 cut(s) 191, 198, 304, 419, 533
PspPI GGNCC 3 cut(s) 63, 99, 673
PstNI CAGNNNCTG 1 cut(s) 691
PsuI RGATCY 1 cut(s) 678
PsyI GACNNNGTC 1 cut(s) 52
PvuI CGATCG 1 cut(s) 238
RsaI GTAC 1 cut(s) 533
RsaNI GTAC 1 cut(s) 532
Rsr2I CGGWCCG 1 cut(s) 99
RsrII CGGWCCG 1 cut(s) 99
SalI GTCGAC 1 cut(s) 434
SaqAI TTAA 2 cut(s) 243, 587
SatI GCNGC 2 cut(s) 395, 575
Sau3AI GATC 6 cut(s) 93, 235, 402, 678, 731, 768
Sau96I GGNCC 3 cut(s) 63, 99, 673
SchI GAGTC 7 cut(s) 71, 175, 368, 431, 544, 567, 709
ScrFI CCNGG 7 cut(s) 17, 52, 147, 194, 338, 422, 725
SduI GDGCHC 2 cut(s) 305, 477
SfaNI GCATC 1 cut(s) 51
SfuI TTCGAA 1 cut(s) 87
SgrAI CRCCGGYG 1 cut(s) 821
SinI GGWCC 3 cut(s) 63, 99, 673
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
Sse9I AATT 6 cut(s) 286, 295, 326, 331, 496, 589
SsiI CCGC 3 cut(s) 119, 394, 445
SspMI CTAG 2 cut(s) 536, 839
StyD4I CCNGG 7 cut(s) 15, 50, 145, 192, 336, 420, 723
StyI CCWWGG 1 cut(s) 789
TaiI ACGT 6 cut(s) 234, 351, 495, 509, 630, 699
TaqI TCGA 8 cut(s) 75, 87, 108, 234, 345, 405, 411, 435
TaqII GACCGA 2 cut(s) 46, 248
TasI AATT 6 cut(s) 286, 295, 326, 331, 496, 589
TauI GCSGC 1 cut(s) 397
Tru1I TTAA 2 cut(s) 243, 587
Tru9I TTAA 2 cut(s) 243, 587
TseFI GTSAC 1 cut(s) 502
TseI GCWGC 1 cut(s) 574
Tsp45I GTSAC 1 cut(s) 502
TspDTI ATGAA 1 cut(s) 796
TspGWI ACGGA 1 cut(s) 91
Tth111I GACNNNGTC 1 cut(s) 52
VpaK11BI GGWCC 3 cut(s) 63, 99, 673
XagI CCTNNNNNAGG 1 cut(s) 539
XapI RAATTY 2 cut(s) 295, 326
XbaI TCTAGA 1 cut(s) 838
XmiI GTMKAC 1 cut(s) 435
XspI CTAG 2 cut(s) 536, 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.