Encoded by
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44260 AT5G22250 |
| fragaria_vesca | FvH4_3g25960 FvH4_6g19860 |
| malus_domestica | MD03G1152000.v1.1 MD03G1152100.v1.1 MD11G1172400.v1.1 MD12G1034100.v1.1 |
| prunus_persica | Prupe.6G139200_v2.0.a1 Prupe.6G139300_v2.0.a1 Prupe.6G139800_v2.0.a1 Prupe.7G098700_v2.0.a1 |
| pyrus_communis | pycom03g10580 pycom05g09910 pycom11g14510 pycom12g03160 pycom14g03120 |
| rosa_chinensis | RchiOBHm_Chr3g0475261 RchiOBHm_Chr5g0047241 |
| rosa_laevigata | RLG00000023855 RLG00000034481 |
| rosa_roxburghii | Rroxscaffold_1G00034130 Rroxscaffold_6G00406420 |
| rosa_rugosa | Rorug03G0147600 Rorug05G0235200 |
| rosa_samantha | Rh3AG197500 Rh3BG227800 Rh3DG223000 Rh5AG314100 Rh5CG349900 Rh5DG333600 |
| rosa_wichuraiana | Rw3G017960 Rw5G029350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 531 |
| AccB1I | GGYRCC | 3 cut(s) | 189, 302, 531 |
| AccI | GTMKAC | 1 cut(s) | 435 |
| AccII | CGCG | 4 cut(s) | 206, 355, 368, 758 |
| AciI | CCGC | 3 cut(s) | 119, 394, 445 |
| AclWI | GGATC | 5 cut(s) | 88, 410, 686, 739, 776 |
| AcsI | RAATTY | 2 cut(s) | 295, 326 |
| AcyI | GRCGYC | 1 cut(s) | 150 |
| AfaI | GTAC | 1 cut(s) | 533 |
| AfeI | AGCGCT | 1 cut(s) | 517 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 193, 299, 421, 541 |
| AflIII | ACRYGT | 1 cut(s) | 756 |
| AgsI | TTSAA | 3 cut(s) | 129, 254, 331 |
| AjiI | CACGTC | 2 cut(s) | 349, 628 |
| AjnI | CCWGG | 1 cut(s) | 723 |
| AluBI | AGCT | 3 cut(s) | 457, 574, 741 |
| AluI | AGCT | 3 cut(s) | 457, 574, 741 |
| Alw26I | GTCTC | 2 cut(s) | 266, 351 |
| AlwI | GGATC | 5 cut(s) | 88, 410, 686, 739, 776 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 691 |
| Ama87I | CYCGRG | 1 cut(s) | 578 |
| Aor51HI | AGCGCT | 1 cut(s) | 517 |
| AoxI | GGCC | 3 cut(s) | 225, 655, 726 |
| ApeKI | GCWGC | 1 cut(s) | 574 |
| ApoI | RAATTY | 2 cut(s) | 295, 326 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 68, 100 |
| Asp718I | GGTACC | 1 cut(s) | 531 |
| AspLEI | GCGC | 5 cut(s) | 27, 208, 355, 370, 518 |
| AspS9I | GGNCC | 3 cut(s) | 63, 99, 673 |
| AsuC2I | CCSGG | 6 cut(s) | 17, 52, 147, 194, 338, 422 |
| AsuII | TTCGAA | 1 cut(s) | 87 |
| AvaI | CYCGRG | 1 cut(s) | 578 |
| AvaII | GGWCC | 3 cut(s) | 63, 99, 673 |
| BaeGI | GKGCMC | 1 cut(s) | 305 |
| BanI | GGYRCC | 3 cut(s) | 189, 302, 531 |
| BanII | GRGCYC | 1 cut(s) | 477 |
| BbsI | GAAGAC | 1 cut(s) | 722 |
| BbvI | GCAGC | 1 cut(s) | 561 |
| BccI | CCATC | 1 cut(s) | 788 |
| BceAI | ACGGC | 1 cut(s) | 292 |
| BciT130I | CCWGG | 1 cut(s) | 725 |
| BcnI | CCSGG | 6 cut(s) | 17, 52, 147, 194, 338, 422 |
| BcoDI | GTCTC | 2 cut(s) | 266, 351 |
| BfaI | CTAG | 2 cut(s) | 536, 839 |
| BfoI | RGCGCY | 2 cut(s) | 28, 519 |
| BisI | GCNGC | 2 cut(s) | 395, 575 |
| BlsI | GCNGC | 2 cut(s) | 396, 576 |
| Bme1390I | CCNGG | 7 cut(s) | 17, 52, 147, 194, 338, 422, 725 |
| Bme18I | GGWCC | 3 cut(s) | 63, 99, 673 |
| BmeT110I | CYCGRG | 1 cut(s) | 578 |
| BmgBI | CACGTC | 2 cut(s) | 349, 628 |
| BmgT120I | GGNCC | 3 cut(s) | 63, 99, 673 |
| BmiI | GGNNCC | 5 cut(s) | 191, 198, 304, 419, 533 |
| BmrFI | CCNGG | 7 cut(s) | 17, 52, 147, 194, 338, 422, 725 |
| BmsI | GCATC | 1 cut(s) | 51 |
| BpiI | GAAGAC | 1 cut(s) | 722 |
| BpmI | CTGGAG | 1 cut(s) | 636 |
| Bpu14I | TTCGAA | 1 cut(s) | 87 |
| BpuEI | CTTGAG | 1 cut(s) | 206 |
| BpuMI | CCSGG | 6 cut(s) | 17, 52, 147, 194, 338, 422 |
| Bsa29I | ATCGAT | 1 cut(s) | 405 |
| BsaHI | GRCGYC | 1 cut(s) | 150 |
| BsaI | GGTCTC | 2 cut(s) | 266, 351 |
| BsaJI | CCNNGG | 1 cut(s) | 789 |
| BsaWI | WCCGGW | 3 cut(s) | 96, 414, 675 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 62, 92 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 193, 299, 421, 541 |
| Bse118I | RCCGGY | 2 cut(s) | 653, 821 |
| Bse3DI | GCAATG | 1 cut(s) | 286 |
| BseBI | CCWGG | 1 cut(s) | 725 |
| BseCI | ATCGAT | 1 cut(s) | 405 |
| BseDI | CCNNGG | 1 cut(s) | 789 |
| BseGI | GGATG | 2 cut(s) | 42, 799 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 193, 299, 421, 541 |
| BseMI | GCAATG | 1 cut(s) | 286 |
| BseMII | CTCAG | 1 cut(s) | 566 |
| BseSI | GKGCMC | 1 cut(s) | 305 |
| BseXI | GCAGC | 1 cut(s) | 561 |
| Bsh1236I | CGCG | 4 cut(s) | 206, 355, 368, 758 |
| Bsh1285I | CGRYCG | 3 cut(s) | 56, 238, 415 |
| BshFI | GGCC | 3 cut(s) | 227, 657, 728 |
| BshNI | GGYRCC | 3 cut(s) | 189, 302, 531 |
| BshVI | ATCGAT | 1 cut(s) | 405 |
| BsiEI | CGRYCG | 3 cut(s) | 56, 238, 415 |
| BsiHKCI | CYCGRG | 1 cut(s) | 578 |
| BslFI | GGGAC | 1 cut(s) | 353 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 193, 299, 421, 541 |
| BsmAI | GTCTC | 2 cut(s) | 266, 351 |
| BsmFI | GGGAC | 1 cut(s) | 353 |
| BsnI | GGCC | 3 cut(s) | 227, 657, 728 |
| Bso31I | GGTCTC | 2 cut(s) | 266, 351 |
| BsoBI | CYCGRG | 1 cut(s) | 578 |
| Bsp119I | TTCGAA | 1 cut(s) | 87 |
| Bsp1286I | GDGCHC | 2 cut(s) | 305, 477 |
| Bsp143I | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| BspACI | CCGC | 3 cut(s) | 119, 394, 445 |
| BspANI | GGCC | 3 cut(s) | 227, 657, 728 |
| BspCNI | CTCAG | 1 cut(s) | 565 |
| BspDI | ATCGAT | 1 cut(s) | 405 |
| BspFNI | CGCG | 4 cut(s) | 206, 355, 368, 758 |
| BspLI | GGNNCC | 5 cut(s) | 191, 198, 304, 419, 533 |
| BspPI | GGATC | 5 cut(s) | 88, 410, 686, 739, 776 |
| BspT104I | TTCGAA | 1 cut(s) | 87 |
| BspT107I | GGYRCC | 3 cut(s) | 189, 302, 531 |
| BspTNI | GGTCTC | 2 cut(s) | 266, 351 |
| BsrDI | GCAATG | 1 cut(s) | 286 |
| BsrFI | RCCGGY | 2 cut(s) | 653, 821 |
| BssAI | RCCGGY | 2 cut(s) | 653, 821 |
| BssECI | CCNNGG | 1 cut(s) | 789 |
| BssMI | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| BssNI | GRCGYC | 1 cut(s) | 150 |
| BssT1I | CCWWGG | 1 cut(s) | 789 |
| Bst2UI | CCWGG | 1 cut(s) | 725 |
| BstACI | GRCGYC | 1 cut(s) | 150 |
| BstBI | TTCGAA | 1 cut(s) | 87 |
| BstC8I | GCNNGC | 3 cut(s) | 655, 756, 823 |
| BstDEI | CTNAG | 1 cut(s) | 552 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 539 |
| BstF5I | GGATG | 2 cut(s) | 42, 799 |
| BstFNI | CGCG | 4 cut(s) | 206, 355, 368, 758 |
| BstH2I | RGCGCY | 2 cut(s) | 28, 519 |
| BstHHI | GCGC | 5 cut(s) | 27, 208, 355, 370, 518 |
| BstKTI | GATC | 6 cut(s) | 96, 238, 405, 681, 734, 771 |
| BstMAI | GTCTC | 2 cut(s) | 266, 351 |
| BstMBI | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| BstMCI | CGRYCG | 3 cut(s) | 56, 238, 415 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 31, 394, 562, 571 |
| BstNI | CCWGG | 1 cut(s) | 725 |
| BstSCI | CCNGG | 7 cut(s) | 15, 50, 145, 192, 336, 420, 723 |
| BstSLI | GKGCMC | 1 cut(s) | 305 |
| BstUI | CGCG | 4 cut(s) | 206, 355, 368, 758 |
| BstV1I | GCAGC | 1 cut(s) | 561 |
| BstV2I | GAAGAC | 1 cut(s) | 722 |
| BstX2I | RGATCY | 1 cut(s) | 678 |
| BstYI | RGATCY | 1 cut(s) | 678 |
| Bsu15I | ATCGAT | 1 cut(s) | 405 |
| BsuRI | GGCC | 3 cut(s) | 227, 657, 728 |
| BsuTUI | ATCGAT | 1 cut(s) | 405 |
| BtrI | CACGTC | 2 cut(s) | 349, 628 |
| BtsCI | GGATG | 2 cut(s) | 42, 799 |
| Cac8I | GCNNGC | 3 cut(s) | 655, 756, 823 |
| CaiI | CAGNNNCTG | 1 cut(s) | 691 |
| CfoI | GCGC | 5 cut(s) | 27, 208, 355, 370, 518 |
| Cfr10I | RCCGGY | 2 cut(s) | 653, 821 |
| Cfr13I | GGNCC | 3 cut(s) | 63, 99, 673 |
| ClaI | ATCGAT | 1 cut(s) | 405 |
| CpoI | CGGWCCG | 1 cut(s) | 99 |
| CseI | GACGC | 2 cut(s) | 139, 212 |
| Csp6I | GTAC | 1 cut(s) | 532 |
| CspI | CGGWCCG | 1 cut(s) | 99 |
| CviAII | CATG | 1 cut(s) | 217 |
| CviJI | RGCY | 8 cut(s) | 227, 457, 475, 574, 657, 670, 728, 741 |
| CviKI_1 | RGCY | 8 cut(s) | 227, 457, 475, 574, 657, 670, 728, 741 |
| CviQI | GTAC | 1 cut(s) | 532 |
| DdeI | CTNAG | 1 cut(s) | 552 |
| DpnI | GATC | 6 cut(s) | 95, 237, 404, 680, 733, 770 |
| DpnII | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| Eco130I | CCWWGG | 1 cut(s) | 789 |
| Eco24I | GRGCYC | 1 cut(s) | 477 |
| Eco31I | GGTCTC | 2 cut(s) | 266, 351 |
| Eco47I | GGWCC | 3 cut(s) | 63, 99, 673 |
| Eco47III | AGCGCT | 1 cut(s) | 517 |
| Eco88I | CYCGRG | 1 cut(s) | 578 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 539 |
| EcoRI | GAATTC | 1 cut(s) | 326 |
| EcoRII | CCWGG | 1 cut(s) | 723 |
| EcoT14I | CCWWGG | 1 cut(s) | 789 |
| EcoT38I | GRGCYC | 1 cut(s) | 477 |
| ErhI | CCWWGG | 1 cut(s) | 789 |
| FaeI | CATG | 1 cut(s) | 220 |
| FaiI | YATR | 9 cut(s) | 38, 218, 314, 318, 513, 594, 661, 663, 834 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 767, 799 |
| FaqI | GGGAC | 1 cut(s) | 353 |
| FatI | CATG | 1 cut(s) | 216 |
| FauI | CCCGC | 1 cut(s) | 126 |
| FblI | GTMKAC | 1 cut(s) | 435 |
| Fnu4HI | GCNGC | 2 cut(s) | 395, 575 |
| FokI | GGATG | 2 cut(s) | 29, 806 |
| FriOI | GRGCYC | 1 cut(s) | 477 |
| Fsp4HI | GCNGC | 2 cut(s) | 395, 575 |
| FspBI | CTAG | 2 cut(s) | 536, 839 |
| GlaI | GCGC | 5 cut(s) | 26, 207, 354, 369, 517 |
| GluI | GCNGC | 2 cut(s) | 395, 575 |
| GsuI | CTGGAG | 1 cut(s) | 636 |
| HaeII | RGCGCY | 2 cut(s) | 28, 519 |
| HaeIII | GGCC | 3 cut(s) | 227, 657, 728 |
| HgaI | GACGC | 2 cut(s) | 139, 212 |
| HhaI | GCGC | 5 cut(s) | 27, 208, 355, 370, 518 |
| Hin1I | GRCGYC | 1 cut(s) | 150 |
| Hin1II | CATG | 1 cut(s) | 220 |
| Hin6I | GCGC | 5 cut(s) | 25, 206, 353, 368, 516 |
| HinP1I | GCGC | 5 cut(s) | 25, 206, 353, 368, 516 |
| HincII | GTYRAC | 3 cut(s) | 436, 549, 747 |
| HindII | GTYRAC | 3 cut(s) | 436, 549, 747 |
| HinfI | GANTC | 7 cut(s) | 77, 181, 374, 437, 550, 558, 700 |
| Hpy166II | GTNNAC | 4 cut(s) | 436, 549, 622, 747 |
| Hpy188I | TCNGA | 6 cut(s) | 67, 82, 161, 274, 736, 773 |
| Hpy188III | TCNNGA | 6 cut(s) | 46, 615, 712, 763, 839, 849 |
| Hpy8I | GTNNAC | 4 cut(s) | 436, 549, 622, 747 |
| Hpy99I | CGWCG | 7 cut(s) | 113, 155, 206, 236, 350, 494, 629 |
| HpyCH4IV | ACGT | 6 cut(s) | 231, 348, 492, 506, 627, 696 |
| HpyCH4V | TGCA | 2 cut(s) | 483, 754 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 31, 394, 562, 571 |
| HpyF3I | CTNAG | 1 cut(s) | 552 |
| HpySE526I | ACGT | 6 cut(s) | 231, 348, 492, 506, 627, 696 |
| Hsp92I | GRCGYC | 1 cut(s) | 150 |
| Hsp92II | CATG | 1 cut(s) | 220 |
| HspAI | GCGC | 5 cut(s) | 25, 206, 353, 368, 516 |
| KpnI | GGTACC | 1 cut(s) | 535 |
| KroI | GCCGGC | 2 cut(s) | 653, 821 |
| KroNI | GCCGGC | 2 cut(s) | 655, 823 |
| Kzo9I | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| Lsp1109I | GCAGC | 1 cut(s) | 561 |
| LweI | GCATC | 1 cut(s) | 51 |
| MaeI | CTAG | 2 cut(s) | 536, 839 |
| MaeII | ACGT | 6 cut(s) | 231, 348, 492, 506, 627, 696 |
| MaeIII | GTNAC | 1 cut(s) | 502 |
| MalI | GATC | 6 cut(s) | 95, 237, 404, 680, 733, 770 |
| MboI | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| MboII | GAAGA | 1 cut(s) | 727 |
| MflI | RGATCY | 1 cut(s) | 678 |
| MhlI | GDGCHC | 2 cut(s) | 305, 477 |
| MluCI | AATT | 6 cut(s) | 286, 295, 326, 331, 496, 589 |
| MluI | ACGCGT | 1 cut(s) | 756 |
| MlyI | GAGTC | 7 cut(s) | 71, 175, 368, 431, 544, 567, 709 |
| MmeI | TCCRAC | 1 cut(s) | 184 |
| MnlI | CCTC | 6 cut(s) | 39, 83, 224, 591, 759, 835 |
| MreI | CGCCGGCG | 1 cut(s) | 821 |
| MroNI | GCCGGC | 2 cut(s) | 653, 821 |
| MseI | TTAA | 2 cut(s) | 243, 587 |
| MspA1I | CMGCKG | 1 cut(s) | 121 |
| MspR9I | CCNGG | 7 cut(s) | 17, 52, 147, 194, 338, 422, 725 |
| MvaI | CCWGG | 1 cut(s) | 725 |
| MvnI | CGCG | 4 cut(s) | 206, 355, 368, 758 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 31, 394, 562, 571 |
| NaeI | GCCGGC | 2 cut(s) | 655, 823 |
| NciI | CCSGG | 6 cut(s) | 17, 52, 147, 194, 338, 422 |
| NdeII | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| NgoMIV | GCCGGC | 2 cut(s) | 653, 821 |
| NlaIII | CATG | 1 cut(s) | 220 |
| NlaIV | GGNNCC | 5 cut(s) | 191, 198, 304, 419, 533 |
| NmeAIII | GCCGAG | 1 cut(s) | 478 |
| NmuCI | GTSAC | 1 cut(s) | 502 |
| NspV | TTCGAA | 1 cut(s) | 87 |
| PdiI | GCCGGC | 2 cut(s) | 655, 823 |
| PflFI | GACNNNGTC | 1 cut(s) | 52 |
| PfoI | TCCNGGA | 1 cut(s) | 336 |
| PkrI | GCNGC | 2 cut(s) | 396, 576 |
| Ple19I | CGATCG | 1 cut(s) | 238 |
| PleI | GAGTC | 7 cut(s) | 71, 175, 368, 431, 544, 566, 708 |
| PpsI | GAGTC | 7 cut(s) | 71, 175, 368, 431, 544, 566, 708 |
| Psp6I | CCWGG | 1 cut(s) | 723 |
| PspGI | CCWGG | 1 cut(s) | 723 |
| PspN4I | GGNNCC | 5 cut(s) | 191, 198, 304, 419, 533 |
| PspPI | GGNCC | 3 cut(s) | 63, 99, 673 |
| PstNI | CAGNNNCTG | 1 cut(s) | 691 |
| PsuI | RGATCY | 1 cut(s) | 678 |
| PsyI | GACNNNGTC | 1 cut(s) | 52 |
| PvuI | CGATCG | 1 cut(s) | 238 |
| RsaI | GTAC | 1 cut(s) | 533 |
| RsaNI | GTAC | 1 cut(s) | 532 |
| Rsr2I | CGGWCCG | 1 cut(s) | 99 |
| RsrII | CGGWCCG | 1 cut(s) | 99 |
| SalI | GTCGAC | 1 cut(s) | 434 |
| SaqAI | TTAA | 2 cut(s) | 243, 587 |
| SatI | GCNGC | 2 cut(s) | 395, 575 |
| Sau3AI | GATC | 6 cut(s) | 93, 235, 402, 678, 731, 768 |
| Sau96I | GGNCC | 3 cut(s) | 63, 99, 673 |
| SchI | GAGTC | 7 cut(s) | 71, 175, 368, 431, 544, 567, 709 |
| ScrFI | CCNGG | 7 cut(s) | 17, 52, 147, 194, 338, 422, 725 |
| SduI | GDGCHC | 2 cut(s) | 305, 477 |
| SfaNI | GCATC | 1 cut(s) | 51 |
| SfuI | TTCGAA | 1 cut(s) | 87 |
| SgrAI | CRCCGGYG | 1 cut(s) | 821 |
| SinI | GGWCC | 3 cut(s) | 63, 99, 673 |
| SmlI | CTYRAG | 1 cut(s) | 221 |
| SmoI | CTYRAG | 1 cut(s) | 221 |
| Sse9I | AATT | 6 cut(s) | 286, 295, 326, 331, 496, 589 |
| SsiI | CCGC | 3 cut(s) | 119, 394, 445 |
| SspMI | CTAG | 2 cut(s) | 536, 839 |
| StyD4I | CCNGG | 7 cut(s) | 15, 50, 145, 192, 336, 420, 723 |
| StyI | CCWWGG | 1 cut(s) | 789 |
| TaiI | ACGT | 6 cut(s) | 234, 351, 495, 509, 630, 699 |
| TaqI | TCGA | 8 cut(s) | 75, 87, 108, 234, 345, 405, 411, 435 |
| TaqII | GACCGA | 2 cut(s) | 46, 248 |
| TasI | AATT | 6 cut(s) | 286, 295, 326, 331, 496, 589 |
| TauI | GCSGC | 1 cut(s) | 397 |
| Tru1I | TTAA | 2 cut(s) | 243, 587 |
| Tru9I | TTAA | 2 cut(s) | 243, 587 |
| TseFI | GTSAC | 1 cut(s) | 502 |
| TseI | GCWGC | 1 cut(s) | 574 |
| Tsp45I | GTSAC | 1 cut(s) | 502 |
| TspDTI | ATGAA | 1 cut(s) | 796 |
| TspGWI | ACGGA | 1 cut(s) | 91 |
| Tth111I | GACNNNGTC | 1 cut(s) | 52 |
| VpaK11BI | GGWCC | 3 cut(s) | 63, 99, 673 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 539 |
| XapI | RAATTY | 2 cut(s) | 295, 326 |
| XbaI | TCTAGA | 1 cut(s) | 838 |
| XmiI | GTMKAC | 1 cut(s) | 435 |
| XspI | CTAG | 2 cut(s) | 536, 839 |