CCR4-associated factor 1 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44260 AT5G22250 |
| fragaria_vesca | FvH4_3g25960 FvH4_6g19860 |
| malus_domestica | MD03G1152000.v1.1 MD03G1152100.v1.1 MD11G1172400.v1.1 MD12G1034100.v1.1 |
| prunus_persica | Prupe.6G139200_v2.0.a1 Prupe.6G139300_v2.0.a1 Prupe.6G139800_v2.0.a1 Prupe.7G098700_v2.0.a1 |
| pyrus_communis | pycom03g10580 pycom05g09910 pycom11g14510 pycom12g03160 pycom14g03120 |
| rosa_chinensis | RchiOBHm_Chr3g0475261 RchiOBHm_Chr5g0047241 |
| rosa_laevigata | RLG00000023855 RLG00000034481 |
| rosa_roxburghii | Rroxscaffold_1G00034130 Rroxscaffold_6G00406420 |
| rosa_rugosa | Rorug03G0147600 Rorug05G0235200 |
| rosa_samantha | Rh3AG197500 Rh3BG227800 Rh3DG223000 Rh5AG314100 Rh5CG349900 Rh5DG333600 |
| rosa_wichuraiana | Rw3G017960 Rw5G029350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 627 |
| AccB1I | GGYRCC | 1 cut(s) | 893 |
| AccII | CGCG | 3 cut(s) | 431, 512, 809 |
| AciI | CCGC | 8 cut(s) | 7, 10, 355, 385, 388, 409, 809, 1025 |
| AclI | AACGTT | 1 cut(s) | 225 |
| AclWI | GGATC | 1 cut(s) | 532 |
| AcsI | RAATTY | 4 cut(s) | 146, 320, 615, 862 |
| AcuI | CTGAAG | 2 cut(s) | 348, 1079 |
| AcyI | GRCGYC | 2 cut(s) | 305, 624 |
| AfaI | GTAC | 5 cut(s) | 176, 515, 527, 632, 659 |
| AfeI | AGCGCT | 1 cut(s) | 979 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 247, 293, 315, 391, 890 |
| AgsI | TTSAA | 5 cut(s) | 24, 325, 331, 950, 1135 |
| AjiI | CACGTC | 1 cut(s) | 747 |
| AjnI | CCWGG | 5 cut(s) | 246, 390, 672, 720, 871 |
| AleI | CACNNNNGTG | 1 cut(s) | 839 |
| AluBI | AGCT | 7 cut(s) | 379, 654, 738, 990, 997, 1093, 1102 |
| AluI | AGCT | 7 cut(s) | 379, 654, 738, 990, 997, 1093, 1102 |
| AlwI | GGATC | 1 cut(s) | 532 |
| Ama87I | CYCGRG | 2 cut(s) | 348, 797 |
| Aor51HI | AGCGCT | 1 cut(s) | 979 |
| AoxI | GGCC | 6 cut(s) | 69, 253, 435, 547, 723, 793 |
| ApaI | GGGCCC | 1 cut(s) | 73 |
| ApeKI | GCWGC | 1 cut(s) | 704 |
| ApoI | RAATTY | 4 cut(s) | 146, 320, 615, 862 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 99 |
| AspLEI | GCGC | 2 cut(s) | 512, 980 |
| AspS9I | GGNCC | 9 cut(s) | 69, 70, 253, 352, 436, 547, 670, 697, 794 |
| AsuC2I | CCSGG | 5 cut(s) | 153, 349, 350, 439, 701 |
| AsuHPI | GGTGA | 3 cut(s) | 250, 256, 544 |
| AsuII | TTCGAA | 1 cut(s) | 93 |
| AvaI | CYCGRG | 2 cut(s) | 348, 797 |
| AvaII | GGWCC | 3 cut(s) | 352, 670, 697 |
| BaeGI | GKGCMC | 2 cut(s) | 73, 898 |
| BanI | GGYRCC | 1 cut(s) | 893 |
| BanII | GRGCYC | 2 cut(s) | 73, 1025 |
| BbvI | GCAGC | 1 cut(s) | 716 |
| BccI | CCATC | 4 cut(s) | 130, 380, 785, 1079 |
| BceAI | ACGGC | 3 cut(s) | 157, 439, 523 |
| BciT130I | CCWGG | 5 cut(s) | 248, 392, 674, 722, 873 |
| BcnI | CCSGG | 5 cut(s) | 153, 349, 350, 439, 701 |
| BfaI | CTAG | 1 cut(s) | 80 |
| BfmI | CTRYAG | 1 cut(s) | 837 |
| BfoI | RGCGCY | 1 cut(s) | 981 |
| BisI | GCNGC | 4 cut(s) | 7, 10, 388, 705 |
| BlsI | GCNGC | 4 cut(s) | 8, 11, 389, 706 |
| Bme18I | GGWCC | 3 cut(s) | 352, 670, 697 |
| BmeT110I | CYCGRG | 2 cut(s) | 348, 797 |
| BmgBI | CACGTC | 1 cut(s) | 747 |
| BmgT120I | GGNCC | 9 cut(s) | 69, 70, 253, 352, 436, 547, 670, 697, 794 |
| BmiI | GGNNCC | 6 cut(s) | 71, 298, 353, 796, 877, 895 |
| BmsI | GCATC | 1 cut(s) | 435 |
| Bpu14I | TTCGAA | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 1039 |
| BpuMI | CCSGG | 5 cut(s) | 153, 349, 350, 439, 701 |
| BsaBI | GATNNNNATC | 1 cut(s) | 53 |
| BsaHI | GRCGYC | 2 cut(s) | 305, 624 |
| BsaJI | CCNNGG | 8 cut(s) | 151, 292, 348, 391, 505, 886, 1028, 1107 |
| BsaWI | WCCGGW | 1 cut(s) | 272 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 281, 311 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 247, 293, 315, 391, 890 |
| Bse118I | RCCGGY | 2 cut(s) | 707, 725 |
| Bse8I | GATNNNNATC | 1 cut(s) | 53 |
| BseBI | CCWGG | 5 cut(s) | 248, 392, 674, 722, 873 |
| BseDI | CCNNGG | 8 cut(s) | 151, 292, 348, 391, 505, 886, 1028, 1107 |
| BseGI | GGATG | 3 cut(s) | 243, 372, 778 |
| BseJI | GATNNNNATC | 1 cut(s) | 53 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 247, 293, 315, 391, 890 |
| BseMII | CTCAG | 2 cut(s) | 78, 498 |
| BseRI | GAGGAG | 1 cut(s) | 371 |
| BseSI | GKGCMC | 2 cut(s) | 73, 898 |
| BseXI | GCAGC | 1 cut(s) | 716 |
| Bsh1236I | CGCG | 3 cut(s) | 431, 512, 809 |
| Bsh1285I | CGRYCG | 3 cut(s) | 51, 198, 409 |
| BshFI | GGCC | 6 cut(s) | 71, 255, 437, 549, 725, 795 |
| BshNI | GGYRCC | 1 cut(s) | 893 |
| BsiEI | CGRYCG | 3 cut(s) | 51, 198, 409 |
| BsiHKCI | CYCGRG | 2 cut(s) | 348, 797 |
| BsiSI | CCGG | 7 cut(s) | 153, 273, 349, 439, 700, 708, 726 |
| BsiWI | CGTACG | 1 cut(s) | 513 |
| BslFI | GGGAC | 2 cut(s) | 365, 480 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 247, 293, 315, 391, 890 |
| BsmFI | GGGAC | 2 cut(s) | 365, 480 |
| BsnI | GGCC | 6 cut(s) | 71, 255, 437, 549, 725, 795 |
| BsoBI | CYCGRG | 2 cut(s) | 348, 797 |
| Bsp119I | TTCGAA | 1 cut(s) | 93 |
| Bsp120I | GGGCCC | 1 cut(s) | 69 |
| Bsp1286I | GDGCHC | 3 cut(s) | 73, 898, 1025 |
| Bsp143I | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| BspACI | CCGC | 8 cut(s) | 7, 10, 355, 385, 388, 409, 809, 1025 |
| BspANI | GGCC | 6 cut(s) | 71, 255, 437, 549, 725, 795 |
| BspCNI | CTCAG | 2 cut(s) | 79, 497 |
| BspFNI | CGCG | 3 cut(s) | 431, 512, 809 |
| BspLI | GGNNCC | 6 cut(s) | 71, 298, 353, 796, 877, 895 |
| BspMAI | CTGCAG | 1 cut(s) | 841 |
| BspPI | GGATC | 1 cut(s) | 532 |
| BspT104I | TTCGAA | 1 cut(s) | 93 |
| BspT107I | GGYRCC | 1 cut(s) | 893 |
| BsrFI | RCCGGY | 2 cut(s) | 707, 725 |
| BssAI | RCCGGY | 2 cut(s) | 707, 725 |
| BssECI | CCNNGG | 8 cut(s) | 151, 292, 348, 391, 505, 886, 1028, 1107 |
| BssMI | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| BssNI | GRCGYC | 2 cut(s) | 305, 624 |
| BssT1I | CCWWGG | 2 cut(s) | 886, 1028 |
| Bst2UI | CCWGG | 5 cut(s) | 248, 392, 674, 722, 873 |
| Bst6I | CTCTTC | 2 cut(s) | 570, 1070 |
| BstACI | GRCGYC | 2 cut(s) | 305, 624 |
| BstBI | TTCGAA | 1 cut(s) | 93 |
| BstC8I | GCNNGC | 6 cut(s) | 740, 753, 807, 1025, 1091, 1104 |
| BstDEI | CTNAG | 2 cut(s) | 87, 484 |
| BstDSI | CCRYGG | 1 cut(s) | 505 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 245 |
| BstF5I | GGATG | 3 cut(s) | 243, 372, 778 |
| BstFNI | CGCG | 3 cut(s) | 431, 512, 809 |
| BstH2I | RGCGCY | 1 cut(s) | 981 |
| BstHHI | GCGC | 2 cut(s) | 512, 980 |
| BstKTI | GATC | 5 cut(s) | 51, 202, 235, 540, 903 |
| BstMBI | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| BstMCI | CGRYCG | 3 cut(s) | 51, 198, 409 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 443, 748, 1003, 1020, 1099 |
| BstNI | CCWGG | 5 cut(s) | 248, 392, 674, 722, 873 |
| BstNSI | RCATGY | 2 cut(s) | 755, 943 |
| BstSFI | CTRYAG | 1 cut(s) | 837 |
| BstSLI | GKGCMC | 2 cut(s) | 73, 898 |
| BstUI | CGCG | 3 cut(s) | 431, 512, 809 |
| BstV1I | GCAGC | 1 cut(s) | 716 |
| BstX2I | RGATCY | 1 cut(s) | 537 |
| BstYI | RGATCY | 1 cut(s) | 537 |
| BsuRI | GGCC | 6 cut(s) | 71, 255, 437, 549, 725, 795 |
| BtgI | CCRYGG | 1 cut(s) | 505 |
| BtgZI | GCGATG | 2 cut(s) | 328, 412 |
| BtrI | CACGTC | 1 cut(s) | 747 |
| BtsCI | GGATG | 3 cut(s) | 243, 372, 778 |
| BtsI | GCAGTG | 2 cut(s) | 834, 846 |
| BtsIMutI | CAGTG | 3 cut(s) | 492, 834, 846 |
| Cac8I | GCNNGC | 6 cut(s) | 740, 753, 807, 1025, 1091, 1104 |
| CfoI | GCGC | 2 cut(s) | 512, 980 |
| Cfr10I | RCCGGY | 2 cut(s) | 707, 725 |
| Cfr13I | GGNCC | 9 cut(s) | 69, 70, 253, 352, 436, 547, 670, 697, 794 |
| Cfr9I | CCCGGG | 1 cut(s) | 348 |
| CseI | GACGC | 2 cut(s) | 313, 420 |
| CsiI | ACCWGGT | 2 cut(s) | 672, 871 |
| Csp6I | GTAC | 5 cut(s) | 175, 514, 526, 631, 658 |
| CviAII | CATG | 4 cut(s) | 571, 634, 752, 940 |
| CviQI | GTAC | 5 cut(s) | 175, 514, 526, 631, 658 |
| DdeI | CTNAG | 2 cut(s) | 87, 484 |
| DpnI | GATC | 5 cut(s) | 50, 201, 234, 539, 902 |
| DpnII | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| DraI | TTTAAA | 2 cut(s) | 690, 867 |
| Eam1104I | CTCTTC | 2 cut(s) | 570, 1070 |
| EarI | CTCTTC | 2 cut(s) | 570, 1070 |
| EciI | GGCGGA | 1 cut(s) | 374 |
| Eco130I | CCWWGG | 2 cut(s) | 886, 1028 |
| Eco24I | GRGCYC | 2 cut(s) | 73, 1025 |
| Eco47I | GGWCC | 3 cut(s) | 352, 670, 697 |
| Eco47III | AGCGCT | 1 cut(s) | 979 |
| Eco57I | CTGAAG | 2 cut(s) | 348, 1079 |
| Eco88I | CYCGRG | 2 cut(s) | 348, 797 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 245 |
| EcoRI | GAATTC | 2 cut(s) | 146, 320 |
| EcoRII | CCWGG | 5 cut(s) | 246, 390, 672, 720, 871 |
| EcoT14I | CCWWGG | 2 cut(s) | 886, 1028 |
| EcoT38I | GRGCYC | 2 cut(s) | 73, 1025 |
| ErhI | CCWWGG | 2 cut(s) | 886, 1028 |
| FaeI | CATG | 4 cut(s) | 574, 637, 755, 943 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 10, 42 |
| FaqI | GGGAC | 2 cut(s) | 365, 480 |
| FatI | CATG | 4 cut(s) | 570, 633, 751, 939 |
| FauI | CCCGC | 2 cut(s) | 802, 1032 |
| FauNDI | CATATG | 1 cut(s) | 1074 |
| Fnu4HI | GCNGC | 4 cut(s) | 7, 10, 388, 705 |
| FokI | GGATG | 3 cut(s) | 230, 359, 785 |
| FriOI | GRGCYC | 2 cut(s) | 73, 1025 |
| Fsp4HI | GCNGC | 4 cut(s) | 7, 10, 388, 705 |
| FspBI | CTAG | 1 cut(s) | 80 |
| GlaI | GCGC | 2 cut(s) | 511, 979 |
| GluI | GCNGC | 4 cut(s) | 7, 10, 388, 705 |
| HaeII | RGCGCY | 1 cut(s) | 981 |
| HaeIII | GGCC | 6 cut(s) | 71, 255, 437, 549, 725, 795 |
| HapII | CCGG | 7 cut(s) | 153, 273, 349, 439, 700, 708, 726 |
| HgaI | GACGC | 2 cut(s) | 313, 420 |
| HhaI | GCGC | 2 cut(s) | 512, 980 |
| Hin1I | GRCGYC | 2 cut(s) | 305, 624 |
| Hin1II | CATG | 4 cut(s) | 574, 637, 755, 943 |
| Hin6I | GCGC | 2 cut(s) | 510, 978 |
| HinP1I | GCGC | 2 cut(s) | 510, 978 |
| HincII | GTYRAC | 1 cut(s) | 229 |
| HindII | GTYRAC | 1 cut(s) | 229 |
| HindIII | AAGCTT | 1 cut(s) | 1091 |
| HinfI | GANTC | 8 cut(s) | 83, 269, 368, 396, 468, 482, 637, 813 |
| HpaII | CCGG | 7 cut(s) | 153, 273, 349, 439, 700, 708, 726 |
| HphI | GGTGA | 3 cut(s) | 250, 256, 544 |
| Hpy166II | GTNNAC | 1 cut(s) | 229 |
| Hpy188I | TCNGA | 9 cut(s) | 59, 88, 367, 421, 608, 733, 762, 986, 1098 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 465 |
| Hpy8I | GTNNAC | 1 cut(s) | 229 |
| Hpy99I | CGWCG | 5 cut(s) | 119, 307, 425, 436, 466 |
| HpyAV | CCTTC | 1 cut(s) | 547 |
| HpyCH4IV | ACGT | 3 cut(s) | 225, 624, 746 |
| HpyCH4V | TGCA | 5 cut(s) | 477, 839, 1006, 1014, 1142 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 443, 748, 1003, 1020, 1099 |
| HpyF3I | CTNAG | 2 cut(s) | 87, 484 |
| HpySE526I | ACGT | 3 cut(s) | 225, 624, 746 |
| Hsp92I | GRCGYC | 2 cut(s) | 305, 624 |
| Hsp92II | CATG | 4 cut(s) | 574, 637, 755, 943 |
| HspAI | GCGC | 2 cut(s) | 510, 978 |
| Kzo9I | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| LmnI | GCTCC | 2 cut(s) | 302, 384 |
| Lsp1109I | GCAGC | 1 cut(s) | 716 |
| LweI | GCATC | 1 cut(s) | 435 |
| MabI | ACCWGGT | 2 cut(s) | 672, 871 |
| MaeI | CTAG | 1 cut(s) | 80 |
| MaeII | ACGT | 3 cut(s) | 225, 624, 746 |
| MaeIII | GTNAC | 2 cut(s) | 647, 1158 |
| MalI | GATC | 5 cut(s) | 50, 201, 234, 539, 902 |
| MboI | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| MboII | GAAGA | 7 cut(s) | 547, 587, 694, 955, 958, 961, 1057 |
| MflI | RGATCY | 1 cut(s) | 537 |
| MhlI | GDGCHC | 3 cut(s) | 73, 898, 1025 |
| MluCI | AATT | 7 cut(s) | 99, 146, 320, 557, 615, 765, 862 |
| MlyI | GAGTC | 5 cut(s) | 263, 362, 462, 476, 822 |
| MmeI | TCCRAC | 4 cut(s) | 82, 246, 444, 675 |
| MroXI | GAANNNNTTC | 1 cut(s) | 99 |
| MseI | TTAA | 2 cut(s) | 689, 866 |
| MslI | CAYNNNNRTG | 2 cut(s) | 248, 839 |
| MspI | CCGG | 7 cut(s) | 153, 273, 349, 439, 700, 708, 726 |
| MvaI | CCWGG | 5 cut(s) | 248, 392, 674, 722, 873 |
| MvnI | CGCG | 3 cut(s) | 431, 512, 809 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 443, 748, 1003, 1020, 1099 |
| NciI | CCSGG | 5 cut(s) | 153, 349, 350, 439, 701 |
| NdeI | CATATG | 1 cut(s) | 1074 |
| NdeII | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| NlaIII | CATG | 4 cut(s) | 574, 637, 755, 943 |
| NlaIV | GGNNCC | 6 cut(s) | 71, 298, 353, 796, 877, 895 |
| NmeAIII | GCCGAG | 3 cut(s) | 273, 588, 1132 |
| NspI | RCATGY | 2 cut(s) | 755, 943 |
| NspV | TTCGAA | 1 cut(s) | 93 |
| OliI | CACNNNNGTG | 1 cut(s) | 839 |
| PaeI | GCATGC | 1 cut(s) | 755 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 477, 513, 752 |
| PdmI | GAANNNNTTC | 1 cut(s) | 99 |
| PfeI | GAWTC | 3 cut(s) | 83, 396, 637 |
| Pfl23II | CGTACG | 1 cut(s) | 513 |
| PkrI | GCNGC | 4 cut(s) | 8, 11, 389, 706 |
| Ple19I | CGATCG | 1 cut(s) | 51 |
| PleI | GAGTC | 5 cut(s) | 263, 362, 462, 476, 821 |
| PpsI | GAGTC | 5 cut(s) | 263, 362, 462, 476, 821 |
| Psp1406I | AACGTT | 1 cut(s) | 225 |
| Psp6I | CCWGG | 5 cut(s) | 246, 390, 672, 720, 871 |
| PspGI | CCWGG | 5 cut(s) | 246, 390, 672, 720, 871 |
| PspLI | CGTACG | 1 cut(s) | 513 |
| PspN4I | GGNNCC | 6 cut(s) | 71, 298, 353, 796, 877, 895 |
| PspOMI | GGGCCC | 1 cut(s) | 69 |
| PspPI | GGNCC | 9 cut(s) | 69, 70, 253, 352, 436, 547, 670, 697, 794 |
| PstI | CTGCAG | 1 cut(s) | 841 |
| PsuI | RGATCY | 1 cut(s) | 537 |
| PvuI | CGATCG | 1 cut(s) | 51 |
| RsaI | GTAC | 5 cut(s) | 176, 515, 527, 632, 659 |
| RsaNI | GTAC | 5 cut(s) | 175, 514, 526, 631, 658 |
| RseI | CAYNNNNRTG | 2 cut(s) | 248, 839 |
| SaqAI | TTAA | 2 cut(s) | 689, 866 |
| SatI | GCNGC | 4 cut(s) | 7, 10, 388, 705 |
| Sau3AI | GATC | 5 cut(s) | 48, 199, 232, 537, 900 |
| Sau96I | GGNCC | 9 cut(s) | 69, 70, 253, 352, 436, 547, 670, 697, 794 |
| SchI | GAGTC | 5 cut(s) | 263, 362, 462, 476, 822 |
| SduI | GDGCHC | 3 cut(s) | 73, 898, 1025 |
| SexAI | ACCWGGT | 2 cut(s) | 672, 871 |
| SfaNI | GCATC | 1 cut(s) | 435 |
| SfcI | CTRYAG | 1 cut(s) | 837 |
| SfuI | TTCGAA | 1 cut(s) | 93 |
| SinI | GGWCC | 3 cut(s) | 352, 670, 697 |
| SmaI | CCCGGG | 1 cut(s) | 350 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 248, 839 |
| SmlI | CTYRAG | 1 cut(s) | 1018 |
| SmoI | CTYRAG | 1 cut(s) | 1018 |
| SphI | GCATGC | 1 cut(s) | 755 |
| Sse9I | AATT | 7 cut(s) | 99, 146, 320, 557, 615, 765, 862 |
| SsiI | CCGC | 8 cut(s) | 7, 10, 355, 385, 388, 409, 809, 1025 |
| SspMI | CTAG | 1 cut(s) | 80 |
| StyI | CCWWGG | 2 cut(s) | 886, 1028 |
| TaiI | ACGT | 3 cut(s) | 228, 627, 749 |
| TaqI | TCGA | 9 cut(s) | 29, 41, 93, 114, 134, 166, 339, 399, 405 |
| TaqII | GACCGA | 1 cut(s) | 212 |
| TasI | AATT | 7 cut(s) | 99, 146, 320, 557, 615, 765, 862 |
| TatI | WGTACW | 1 cut(s) | 630 |
| TauI | GCSGC | 3 cut(s) | 9, 12, 390 |
| TfiI | GAWTC | 3 cut(s) | 83, 396, 637 |
| Tru1I | TTAA | 2 cut(s) | 689, 866 |
| Tru9I | TTAA | 2 cut(s) | 689, 866 |
| TscAI | CASTG | 3 cut(s) | 492, 841, 846 |
| TseI | GCWGC | 1 cut(s) | 704 |
| TspDTI | ATGAA | 2 cut(s) | 800, 961 |
| TspGWI | ACGGA | 1 cut(s) | 675 |
| TspMI | CCCGGG | 1 cut(s) | 348 |
| TspRI | CASTG | 3 cut(s) | 492, 841, 846 |
| VpaK11BI | GGWCC | 3 cut(s) | 352, 670, 697 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 245 |
| XapI | RAATTY | 4 cut(s) | 146, 320, 615, 862 |
| XbaI | TCTAGA | 1 cut(s) | 79 |
| XceI | RCATGY | 2 cut(s) | 755, 943 |
| XmaI | CCCGGG | 1 cut(s) | 348 |
| XmnI | GAANNNNTTC | 1 cut(s) | 99 |
| XspI | CTAG | 1 cut(s) | 80 |
| ZraI | GACGTC | 1 cut(s) | 625 |