Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003980

Physical Location & Seq

Genomic Coordinates Forward (+)

45439137 .. 45440983

Gene Structure 1847 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG314100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGTACTGCACCATGGAACACCCTCCAAATCCCAGCCCCATCGTGATCCGCGAAGTCTGGGCCCACAACCTGGACGCGGAATTCGAGCTGATCCAGAACGCGATCGACGACTTCCCTTACATCTCCATGGACACCGAGTTCCCCGGCCTCGTCTTCCGCCCCCAGCTGGACCCCACCCGCCCCTACGGCAAGCAGCTCCGCCCCTCCGATCACTACAAGGTCCTCAAGTCCAACGTCGACGCGCTCAGCCTGATTCAGGTGGGCCTCACGCTCTCCGACTCCCGCGGCAACCTCCCCGACCTCGGCACCCGCGGCGCCACGCGCTTCATCTGGGAGTTCAACTTCAACGACTTCGACGTCGCGCGTGACCCCCACGCTCCCGACTCCATCGAGCTCCTCCGCCGCCAGGGCATCGACTTCGACCGCAACAGGGCCGAGGGCGTCGACTCGGCGCGCTTCGCCGCGCTCATGATGACGTCGGGGCTCGTCTGCAACGACGCCGTCAGCTGGGTCACCTTCCACAGCGCGTACGACTTCGGGTACCTGGTCAAGATCCTCACGCGCCGGAACCTGCCGAGTGGCATGAAGGAGTTTCACAGAGTTCTCAGGGCCTTTTTCGGGAATAGAATTTACGACATCAAGCACATGATGCGGTTCTGTAAGAGCCTGTATGGCGGGCTGGACCGGGTCGCCAGGACCTTGGAGGTGGACCGGGCGGTCGGGAAGTGCCACCAGGCCGGGTCAGATAGCTTGCTGACGTGGCACGCGTTTCAGAAGATGAGGGATGTGTATTTTGTAAATGATGGGCCGGAGCAGCACGCCGGAGTGTTGTACGGCCTCGAGGTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000288 GO:0000289 GO:0000291 GO:0000932 GO:0000956 GO:0002213 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004535 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0017148 GO:0019222 GO:0019439 GO:0030014 GO:0030015 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0032991 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0098542 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

CAF1

Protein Analysis

283

Amino Acids

32.4

Weight (kDa)

6.2

Isoelectric Point (pI)

32.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1	PF04857	19 - 148	5.2e-11	CAF1 family ribonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44260 AT5G22250
fragaria_vesca	FvH4_3g25960 FvH4_6g19860
malus_domestica	MD03G1152000.v1.1 MD03G1152100.v1.1 MD11G1172400.v1.1 MD12G1034100.v1.1
prunus_persica	Prupe.6G139200_v2.0.a1 Prupe.6G139300_v2.0.a1 Prupe.6G139800_v2.0.a1 Prupe.7G098700_v2.0.a1
pyrus_communis	pycom03g10580 pycom05g09910 pycom11g14510 pycom12g03160 pycom14g03120
rosa_chinensis	RchiOBHm_Chr3g0475261 RchiOBHm_Chr5g0047241
rosa_laevigata	RLG00000023855 RLG00000034481
rosa_roxburghii	Rroxscaffold_1G00034130 Rroxscaffold_6G00406420
rosa_rugosa	Rorug03G0147600 Rorug05G0235200
rosa_samantha	Rh3AG197500 Rh3BG227800 Rh3DG223000 Rh5AG314100 Rh5CG349900 Rh5DG333600
rosa_wichuraiana	Rw3G017960 Rw5G029350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	356, 716
AatII	GACGTC	2 cut(s)	360, 479
AbsI	CCTCGAGG	1 cut(s)	839
Acc36I	ACCTGC	1 cut(s)	579
Acc65I	GGTACC	1 cut(s)	540
AccB1I	GGYRCC	3 cut(s)	305, 314, 540
AccB7I	CCANNNNNTGG	1 cut(s)	70
AccI	GTMKAC	2 cut(s)	237, 444
AclWI	GGATC	3 cut(s)	40, 85, 547
AcsI	RAATTY	2 cut(s)	80, 627
AcyI	GRCGYC	5 cut(s)	315, 357, 441, 476, 498
AfaI	GTAC	4 cut(s)	5, 530, 542, 833
AfiI	CCNNNNNNNGG	9 cut(s)	70, 76, 166, 256, 302, 406, 430, 507, 618
AflIII	ACRYGT	1 cut(s)	765
AgsI	TTSAA	2 cut(s)	340, 346
AjiI	CACGTC	1 cut(s)	759
AjnI	CCWGG	5 cut(s)	69, 405, 543, 692, 732
AloI	GAACNNNNNNTCC	2 cut(s)	122, 154
AluBI	AGCT	6 cut(s)	88, 166, 196, 394, 507, 750
AluI	AGCT	6 cut(s)	88, 166, 196, 394, 507, 750
Alw21I	GWGCWC	1 cut(s)	396
AlwI	GGATC	3 cut(s)	40, 85, 547
Ama87I	CYCGRG	1 cut(s)	839
AoxI	GGCC	8 cut(s)	60, 145, 262, 432, 609, 735, 806, 835
ApaI	GGGCCC	1 cut(s)	64
ApeKI	GCWGC	2 cut(s)	193, 814
ApoI	RAATTY	2 cut(s)	80, 627
ArsI	GACNNNNNNTTYG	2 cut(s)	65, 97
Asp718I	GGTACC	1 cut(s)	540
AspLEI	GCGC	9 cut(s)	244, 317, 324, 364, 454, 456, 466, 527, 564
AsuC2I	CCSGG	4 cut(s)	144, 686, 713, 739
AsuHPI	GGTGA	1 cut(s)	505
AvaI	CYCGRG	1 cut(s)	839
AvaII	GGWCC	5 cut(s)	169, 220, 682, 696, 709
BaeGI	GKGCMC	1 cut(s)	64
BanI	GGYRCC	3 cut(s)	305, 314, 540
BanII	GRGCYC	3 cut(s)	64, 396, 486
BbsI	GAAGAC	1 cut(s)	145
Bbv12I	GWGCWC	1 cut(s)	396
BbvI	GCAGC	2 cut(s)	205, 826
BccI	CCATC	3 cut(s)	47, 395, 797
BceAI	ACGGC	3 cut(s)	202, 485, 850
BcgI	CGANNNNNNTGC	2 cut(s)	400, 434
BciT130I	CCWGG	5 cut(s)	71, 407, 545, 694, 734
BcnI	CCSGG	4 cut(s)	144, 686, 713, 739
BfoI	RGCGCY	1 cut(s)	318
BfuAI	ACCTGC	1 cut(s)	579
BglI	GCCNNNNNGGC	3 cut(s)	186, 408, 672
BisI	GCNGC	6 cut(s)	194, 286, 313, 403, 462, 815
BlpI	GCTNAGC	1 cut(s)	245
BlsI	GCNGC	6 cut(s)	195, 287, 314, 404, 463, 816
Bme1390I	CCNGG	9 cut(s)	71, 144, 407, 545, 686, 694, 713, 734, 739
Bme18I	GGWCC	5 cut(s)	169, 220, 682, 696, 709
BmeT110I	CYCGRG	1 cut(s)	839
BmgBI	CACGTC	1 cut(s)	759
BmiI	GGNNCC	6 cut(s)	62, 171, 307, 316, 542, 569
BmrFI	CCNGG	9 cut(s)	71, 144, 407, 545, 686, 694, 713, 734, 739
BmsI	GCATC	2 cut(s)	420, 639
BpiI	GAAGAC	1 cut(s)	145
Bpu1102I	GCTNAGC	1 cut(s)	245
BpuEI	CTTGAG	1 cut(s)	209
BpuMI	CCSGG	4 cut(s)	144, 686, 713, 739
BsaHI	GRCGYC	5 cut(s)	315, 357, 441, 476, 498
BsaJI	CCNNGG	9 cut(s)	12, 126, 142, 283, 301, 310, 406, 435, 699
Bsc4I	CCNNNNNNNGG	9 cut(s)	70, 76, 166, 256, 302, 406, 430, 507, 618
BseBI	CCWGG	5 cut(s)	71, 407, 545, 694, 734
BseDI	CCNNGG	9 cut(s)	12, 126, 142, 283, 301, 310, 406, 435, 699
BseGI	GGATG	1 cut(s)	790
BseLI	CCNNNNNNNGG	9 cut(s)	70, 76, 166, 256, 302, 406, 430, 507, 618
BseMII	CTCAG	2 cut(s)	259, 619
BsePI	GCGCGC	1 cut(s)	452
BseRI	GAGGAG	1 cut(s)	386
BseSI	GKGCMC	1 cut(s)	64
BseXI	GCAGC	2 cut(s)	205, 826
BseYI	CCCAGC	3 cut(s)	32, 162, 507
Bsh1285I	CGRYCG	3 cut(s)	105, 424, 720
BshFI	GGCC	8 cut(s)	62, 147, 264, 434, 611, 737, 808, 837
BshNI	GGYRCC	3 cut(s)	305, 314, 540
BsiEI	CGRYCG	3 cut(s)	105, 424, 720
BsiHKAI	GWGCWC	1 cut(s)	396
BsiHKCI	CYCGRG	1 cut(s)	839
BsiSI	CCGG	7 cut(s)	144, 565, 685, 712, 738, 809, 822
BsiWI	CGTACG	1 cut(s)	528
BslI	CCNNNNNNNGG	9 cut(s)	70, 76, 166, 256, 302, 406, 430, 507, 618
BsnI	GGCC	8 cut(s)	62, 147, 264, 434, 611, 737, 808, 837
BsoBI	CYCGRG	1 cut(s)	839
Bsp120I	GGGCCC	1 cut(s)	60
Bsp1286I	GDGCHC	3 cut(s)	64, 396, 486
Bsp143I	GATC	5 cut(s)	45, 90, 102, 208, 552
Bsp1720I	GCTNAGC	1 cut(s)	245
Bsp19I	CCATGG	2 cut(s)	12, 126
BspANI	GGCC	8 cut(s)	62, 147, 264, 434, 611, 737, 808, 837
BspCNI	CTCAG	2 cut(s)	258, 618
BspHI	TCATGA	1 cut(s)	468
BspLI	GGNNCC	6 cut(s)	62, 171, 307, 316, 542, 569
BspMI	ACCTGC	1 cut(s)	579
BspPI	GGATC	3 cut(s)	40, 85, 547
BspT107I	GGYRCC	3 cut(s)	305, 314, 540
BssECI	CCNNGG	9 cut(s)	12, 126, 142, 283, 301, 310, 406, 435, 699
BssHII	GCGCGC	1 cut(s)	452
BssMI	GATC	5 cut(s)	45, 90, 102, 208, 552
BssNI	GRCGYC	5 cut(s)	315, 357, 441, 476, 498
BssT1I	CCWWGG	3 cut(s)	12, 126, 699
Bst2UI	CCWGG	5 cut(s)	71, 407, 545, 694, 734
BstACI	GRCGYC	5 cut(s)	315, 357, 441, 476, 498
BstAPI	GCANNNNNTGC	1 cut(s)	649
BstC8I	GCNNGC	6 cut(s)	191, 454, 677, 752, 765, 819
BstDEI	CTNAG	2 cut(s)	245, 605
BstDSI	CCRYGG	4 cut(s)	12, 126, 283, 310
BstEII	GGTNACC	1 cut(s)	511
BstENI	CCTNNNNNAGG	1 cut(s)	254
BstF5I	GGATG	1 cut(s)	790
BstH2I	RGCGCY	1 cut(s)	318
BstHHI	GCGC	9 cut(s)	244, 317, 324, 364, 454, 456, 466, 527, 564
BstKTI	GATC	5 cut(s)	48, 93, 105, 211, 555
BstMBI	GATC	5 cut(s)	45, 90, 102, 208, 552
BstMCI	CGRYCG	3 cut(s)	105, 424, 720
BstMWI	GCNNNNNNNGC	9 cut(s)	186, 312, 321, 408, 458, 649, 672, 760, 814
BstNI	CCWGG	5 cut(s)	71, 407, 545, 694, 734
BstPI	GGTNACC	1 cut(s)	511
BstSCI	CCNGG	9 cut(s)	69, 142, 405, 543, 684, 692, 711, 732, 737
BstSLI	GKGCMC	1 cut(s)	64
BstV1I	GCAGC	2 cut(s)	205, 826
BstV2I	GAAGAC	1 cut(s)	145
BstX2I	RGATCY	1 cut(s)	552
BstXI	CCANNNNNNTGG	1 cut(s)	700
BstYI	RGATCY	1 cut(s)	552
BsuRI	GGCC	8 cut(s)	62, 147, 264, 434, 611, 737, 808, 837
BtgI	CCRYGG	4 cut(s)	12, 126, 283, 310
BtrI	CACGTC	1 cut(s)	759
BtsCI	GGATG	1 cut(s)	790
BveI	ACCTGC	1 cut(s)	579
Cac8I	GCNNGC	6 cut(s)	191, 454, 677, 752, 765, 819
CciI	TCATGA	1 cut(s)	468
CfoI	GCGC	9 cut(s)	244, 317, 324, 364, 454, 456, 466, 527, 564
Cfr42I	CCGCGG	2 cut(s)	286, 313
CseI	GACGC	4 cut(s)	83, 248, 430, 506
CsiI	ACCWGGT	1 cut(s)	543
Csp6I	GTAC	4 cut(s)	4, 529, 541, 832
CviAII	CATG	5 cut(s)	13, 127, 469, 583, 646
CviQI	GTAC	4 cut(s)	4, 529, 541, 832
DdeI	CTNAG	2 cut(s)	245, 605
DinI	GGCGCC	1 cut(s)	316
DpnI	GATC	5 cut(s)	47, 92, 104, 210, 554
DpnII	GATC	5 cut(s)	45, 90, 102, 208, 552
DrdI	GACNNNNNNGTC	2 cut(s)	356, 716
DseDI	GACNNNNNNGTC	2 cut(s)	356, 716
EciI	GGCGGA	3 cut(s)	146, 188, 389
Ecl136II	GAGCTC	1 cut(s)	394
Eco130I	CCWWGG	3 cut(s)	12, 126, 699
Eco24I	GRGCYC	3 cut(s)	64, 396, 486
Eco47I	GGWCC	5 cut(s)	169, 220, 682, 696, 709
Eco53kI	GAGCTC	1 cut(s)	394
Eco88I	CYCGRG	1 cut(s)	839
Eco91I	GGTNACC	1 cut(s)	511
EcoICRI	GAGCTC	1 cut(s)	394
EcoNI	CCTNNNNNAGG	1 cut(s)	254
EcoO109I	RGGNCCY	3 cut(s)	220, 609, 696
EcoO65I	GGTNACC	1 cut(s)	511
EcoRI	GAATTC	1 cut(s)	80
EcoRII	CCWGG	5 cut(s)	69, 405, 543, 692, 732
EcoT14I	CCWWGG	3 cut(s)	12, 126, 699
EcoT38I	GRGCYC	3 cut(s)	64, 396, 486
EgeI	GGCGCC	1 cut(s)	316
EheI	GGCGCC	1 cut(s)	316
ErhI	CCWWGG	3 cut(s)	12, 126, 699
FaeI	CATG	5 cut(s)	16, 130, 472, 586, 649
FaiI	YATR	6 cut(s)	14, 128, 470, 584, 647, 672
FatI	CATG	5 cut(s)	12, 126, 468, 582, 645
FauI	CCCGC	4 cut(s)	185, 290, 317, 668
FblI	GTMKAC	2 cut(s)	237, 444
Fnu4HI	GCNGC	6 cut(s)	194, 286, 313, 403, 462, 815
FokI	GGATG	1 cut(s)	797
FriOI	GRGCYC	3 cut(s)	64, 396, 486
Fsp4HI	GCNGC	6 cut(s)	194, 286, 313, 403, 462, 815
GlaI	GCGC	9 cut(s)	243, 316, 323, 363, 453, 455, 465, 526, 563
GluI	GCNGC	6 cut(s)	194, 286, 313, 403, 462, 815
GsaI	CCCAGC	3 cut(s)	36, 166, 511
HaeII	RGCGCY	1 cut(s)	318
HaeIII	GGCC	8 cut(s)	62, 147, 264, 434, 611, 737, 808, 837
HapII	CCGG	7 cut(s)	144, 565, 685, 712, 738, 809, 822
HgaI	GACGC	4 cut(s)	83, 248, 430, 506
HhaI	GCGC	9 cut(s)	244, 317, 324, 364, 454, 456, 466, 527, 564
Hin1I	GRCGYC	5 cut(s)	315, 357, 441, 476, 498
Hin1II	CATG	5 cut(s)	16, 130, 472, 586, 649
Hin6I	GCGC	9 cut(s)	242, 315, 322, 362, 452, 454, 464, 525, 562
HinP1I	GCGC	9 cut(s)	242, 315, 322, 362, 452, 454, 464, 525, 562
HincII	GTYRAC	2 cut(s)	238, 445
HindII	GTYRAC	2 cut(s)	238, 445
HinfI	GANTC	4 cut(s)	253, 278, 383, 446
HpaII	CCGG	7 cut(s)	144, 565, 685, 712, 738, 809, 822
HphI	GGTGA	1 cut(s)	505
Hpy166II	GTNNAC	3 cut(s)	238, 445, 709
Hpy188I	TCNGA	4 cut(s)	208, 277, 745, 774
Hpy188III	TCNNGA	7 cut(s)	43, 94, 380, 469, 550, 619, 721
Hpy8I	GTNNAC	3 cut(s)	238, 445, 709
Hpy99I	CGWCG	8 cut(s)	110, 239, 242, 359, 362, 446, 481, 500
HpyAV	CCTTC	2 cut(s)	526, 580
HpyCH4IV	ACGT	4 cut(s)	234, 357, 476, 758
HpyCH4V	TGCA	2 cut(s)	9, 492
HpyF10VI	GCNNNNNNNGC	9 cut(s)	186, 312, 321, 408, 458, 649, 672, 760, 814
HpyF3I	CTNAG	2 cut(s)	245, 605
HpySE526I	ACGT	4 cut(s)	234, 357, 476, 758
Hsp92I	GRCGYC	5 cut(s)	315, 357, 441, 476, 498
Hsp92II	CATG	5 cut(s)	16, 130, 472, 586, 649
HspAI	GCGC	9 cut(s)	242, 315, 322, 362, 452, 454, 464, 525, 562
KasI	GGCGCC	1 cut(s)	314
KpnI	GGTACC	1 cut(s)	544
KspI	CCGCGG	2 cut(s)	286, 313
Kzo9I	GATC	5 cut(s)	45, 90, 102, 208, 552
LmnI	GCTCC	4 cut(s)	201, 382, 399, 811
Lsp1109I	GCAGC	2 cut(s)	205, 826
LweI	GCATC	2 cut(s)	420, 639
MabI	ACCWGGT	1 cut(s)	543
MaeII	ACGT	4 cut(s)	234, 357, 476, 758
MaeIII	GTNAC	2 cut(s)	365, 511
MalI	GATC	5 cut(s)	47, 92, 104, 210, 554
MboI	GATC	5 cut(s)	45, 90, 102, 208, 552
MboII	GAAGA	2 cut(s)	145, 787
MflI	RGATCY	1 cut(s)	552
MhlI	GDGCHC	3 cut(s)	64, 396, 486
MluCI	AATT	2 cut(s)	80, 627
MluI	ACGCGT	1 cut(s)	765
Mly113I	GGCGCC	1 cut(s)	315
MlyI	GAGTC	3 cut(s)	272, 377, 440
MmeI	TCCRAC	2 cut(s)	255, 300
MslI	CAYNNNNRTG	1 cut(s)	125
MspA1I	CMGCKG	4 cut(s)	166, 285, 312, 507
MspI	CCGG	7 cut(s)	144, 565, 685, 712, 738, 809, 822
MspR9I	CCNGG	9 cut(s)	71, 144, 407, 545, 686, 694, 713, 734, 739
MvaI	CCWGG	5 cut(s)	71, 407, 545, 694, 734
MwoI	GCNNNNNNNGC	9 cut(s)	186, 312, 321, 408, 458, 649, 672, 760, 814
NarI	GGCGCC	1 cut(s)	315
NciI	CCSGG	4 cut(s)	144, 686, 713, 739
NcoI	CCATGG	2 cut(s)	12, 126
NdeII	GATC	5 cut(s)	45, 90, 102, 208, 552
NlaIII	CATG	5 cut(s)	16, 130, 472, 586, 649
NlaIV	GGNNCC	6 cut(s)	62, 171, 307, 316, 542, 569
NmeAIII	GCCGAG	4 cut(s)	282, 428, 460, 600
NmuCI	GTSAC	2 cut(s)	365, 511
PaeR7I	CTCGAG	1 cut(s)	839
PagI	TCATGA	1 cut(s)	468
PauI	GCGCGC	1 cut(s)	452
PcsI	WCGNNNNNNNCGW	6 cut(s)	48, 81, 105, 354, 492, 764
PfeI	GAWTC	1 cut(s)	253
Pfl23II	CGTACG	1 cut(s)	528
PflFI	GACNNNGTC	2 cut(s)	500, 686
PflMI	CCANNNNNTGG	1 cut(s)	70
PkrI	GCNGC	6 cut(s)	195, 287, 314, 404, 463, 816
Ple19I	CGATCG	1 cut(s)	105
PleI	GAGTC	3 cut(s)	272, 377, 440
PluTI	GGCGCC	1 cut(s)	318
PpsI	GAGTC	3 cut(s)	272, 377, 440
PpuMI	RGGWCCY	2 cut(s)	220, 696
Psp124BI	GAGCTC	1 cut(s)	396
Psp5II	RGGWCCY	2 cut(s)	220, 696
Psp6I	CCWGG	5 cut(s)	69, 405, 543, 692, 732
PspEI	GGTNACC	1 cut(s)	511
PspFI	CCCAGC	3 cut(s)	32, 162, 507
PspGI	CCWGG	5 cut(s)	69, 405, 543, 692, 732
PspLI	CGTACG	1 cut(s)	528
PspN4I	GGNNCC	6 cut(s)	62, 171, 307, 316, 542, 569
PspOMI	GGGCCC	1 cut(s)	60
PspPPI	RGGWCCY	2 cut(s)	220, 696
PspXI	VCTCGAGB	1 cut(s)	839
PsuI	RGATCY	1 cut(s)	552
PsyI	GACNNNGTC	2 cut(s)	500, 686
PteI	GCGCGC	1 cut(s)	452
PvuI	CGATCG	1 cut(s)	105
PvuII	CAGCTG	2 cut(s)	166, 507
RsaI	GTAC	4 cut(s)	5, 530, 542, 833
RsaNI	GTAC	4 cut(s)	4, 529, 541, 832
RseI	CAYNNNNRTG	1 cut(s)	125
SacI	GAGCTC	1 cut(s)	396
SacII	CCGCGG	2 cut(s)	286, 313
SalI	GTCGAC	2 cut(s)	236, 443
SatI	GCNGC	6 cut(s)	194, 286, 313, 403, 462, 815
Sau3AI	GATC	5 cut(s)	45, 90, 102, 208, 552
SchI	GAGTC	3 cut(s)	272, 377, 440
ScrFI	CCNGG	9 cut(s)	71, 144, 407, 545, 686, 694, 713, 734, 739
SduI	GDGCHC	3 cut(s)	64, 396, 486
SexAI	ACCWGGT	1 cut(s)	543
SfaNI	GCATC	2 cut(s)	420, 639
SfoI	GGCGCC	1 cut(s)	316
Sfr274I	CTCGAG	1 cut(s)	839
Sfr303I	CCGCGG	2 cut(s)	286, 313
SgrBI	CCGCGG	2 cut(s)	286, 313
SgrDI	CGTCGACG	1 cut(s)	236
SinI	GGWCC	5 cut(s)	169, 220, 682, 696, 709
SlaI	CTCGAG	1 cut(s)	839
SmiMI	CAYNNNNRTG	1 cut(s)	125
SmlI	CTYRAG	2 cut(s)	224, 839
SmoI	CTYRAG	2 cut(s)	224, 839
Sse9I	AATT	2 cut(s)	80, 627
SspDI	GGCGCC	1 cut(s)	314
SstI	GAGCTC	1 cut(s)	396
StyD4I	CCNGG	9 cut(s)	69, 142, 405, 543, 684, 692, 711, 732, 737
StyI	CCWWGG	3 cut(s)	12, 126, 699
TaiI	ACGT	4 cut(s)	237, 360, 479, 761
TaqI	TCGA	9 cut(s)	84, 105, 237, 354, 390, 414, 420, 444, 840
TasI	AATT	2 cut(s)	80, 627
TatI	WGTACW	1 cut(s)	3
TauI	GCSGC	4 cut(s)	288, 315, 405, 464
TfiI	GAWTC	1 cut(s)	253
TseFI	GTSAC	2 cut(s)	365, 511
TseI	GCWGC	2 cut(s)	193, 814
Tsp45I	GTSAC	2 cut(s)	365, 511
TspDTI	ATGAA	2 cut(s)	316, 599
Tth111I	GACNNNGTC	2 cut(s)	500, 686
Van91I	CCANNNNNTGG	1 cut(s)	70
VpaK11BI	GGWCC	5 cut(s)	169, 220, 682, 696, 709
XagI	CCTNNNNNAGG	1 cut(s)	254
XapI	RAATTY	2 cut(s)	80, 627
XhoI	CTCGAG	1 cut(s)	839
XmiI	GTMKAC	2 cut(s)	237, 444
ZraI	GACGTC	2 cut(s)	358, 477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.