RING finger and CHY zinc finger domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22920 AT5G22920 |
| fragaria_vesca | FvH4_6g16750 |
| malus_domestica | MD12G1107600.v1.1 |
| prunus_persica | Prupe.7G126100_v2.0.a1 |
| pyrus_communis | pycom04g08360 pycom12g10770 |
| rosa_chinensis | RchiOBHm_Chr3g0470691 RchiOBHm_Chr5g0056891 |
| rosa_laevigata | RLG00000024247 |
| rosa_multiflora | Rmu_sc0006168.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00023410 Rroxscaffold_6G00410580 |
| rosa_rugosa | Rorug03G0112100 Rorug03G0112200 Rorug05G0303400 Rorug05G0303500 |
| rosa_samantha | Rh3AG161700 Rh3BG186200 Rh3CG176600 Rh3DG188900 Rh5AG373400 Rh5CG407600 Rh5DG397700 |
| rosa_wichuraiana | Rw0G004620 Rw3G015250 Rw5G035110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 551 |
| AccBSI | CCGCTC | 1 cut(s) | 9 |
| AccII | CGCG | 1 cut(s) | 648 |
| AciI | CCGC | 4 cut(s) | 9, 300, 387, 750 |
| AclWI | GGATC | 6 cut(s) | 6, 19, 88, 194, 727, 740 |
| AcsI | RAATTY | 3 cut(s) | 88, 415, 769 |
| AfaI | GTAC | 1 cut(s) | 371 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 663, 664 |
| AgsI | TTSAA | 3 cut(s) | 34, 281, 463 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 323, 355 |
| AleI | CACNNNNGTG | 2 cut(s) | 477, 790 |
| Alw21I | GWGCWC | 1 cut(s) | 133 |
| Alw26I | GTCTC | 1 cut(s) | 11 |
| AlwI | GGATC | 6 cut(s) | 6, 19, 88, 194, 727, 740 |
| AoxI | GGCC | 1 cut(s) | 836 |
| ApeKI | GCWGC | 1 cut(s) | 689 |
| ApoI | RAATTY | 3 cut(s) | 88, 415, 769 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 419 |
| AspLEI | GCGC | 1 cut(s) | 101 |
| AspS9I | GGNCC | 1 cut(s) | 836 |
| AsuC2I | CCSGG | 1 cut(s) | 626 |
| AsuII | TTCGAA | 1 cut(s) | 359 |
| BamHI | GGATCC | 2 cut(s) | 11, 732 |
| Bbv12I | GWGCWC | 1 cut(s) | 133 |
| BbvI | GCAGC | 1 cut(s) | 676 |
| BccI | CCATC | 4 cut(s) | 19, 70, 592, 718 |
| BciVI | GTATCC | 1 cut(s) | 302 |
| BclI | TGATCA | 2 cut(s) | 58, 676 |
| BcnI | CCSGG | 1 cut(s) | 626 |
| BcoDI | GTCTC | 1 cut(s) | 11 |
| BfmI | CTRYAG | 1 cut(s) | 394 |
| BfuI | GTATCC | 1 cut(s) | 302 |
| BisI | GCNGC | 2 cut(s) | 301, 690 |
| BlsI | GCNGC | 2 cut(s) | 302, 691 |
| Bme1390I | CCNGG | 1 cut(s) | 626 |
| BmgT120I | GGNCC | 1 cut(s) | 836 |
| BmiI | GGNNCC | 2 cut(s) | 13, 734 |
| BmrFI | CCNGG | 1 cut(s) | 626 |
| BmsI | GCATC | 1 cut(s) | 505 |
| Bpu14I | TTCGAA | 1 cut(s) | 359 |
| BpuMI | CCSGG | 1 cut(s) | 626 |
| BsaAI | YACGTR | 1 cut(s) | 788 |
| BsaI | GGTCTC | 1 cut(s) | 11 |
| BsaWI | WCCGGW | 1 cut(s) | 401 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 663, 664 |
| Bse1I | ACTGG | 1 cut(s) | 613 |
| Bse3DI | GCAATG | 4 cut(s) | 163, 498, 607, 748 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 663, 664 |
| BseMI | GCAATG | 4 cut(s) | 163, 498, 607, 748 |
| BseNI | ACTGG | 1 cut(s) | 613 |
| BseXI | GCAGC | 1 cut(s) | 676 |
| Bsh1236I | CGCG | 1 cut(s) | 648 |
| BshFI | GGCC | 1 cut(s) | 838 |
| BsiHKAI | GWGCWC | 1 cut(s) | 133 |
| BsiSI | CCGG | 2 cut(s) | 402, 626 |
| BslFI | GGGAC | 1 cut(s) | 640 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 663, 664 |
| BsmAI | GTCTC | 1 cut(s) | 11 |
| BsmFI | GGGAC | 1 cut(s) | 640 |
| BsmI | GAATGC | 1 cut(s) | 389 |
| BsnI | GGCC | 1 cut(s) | 838 |
| Bso31I | GGTCTC | 1 cut(s) | 11 |
| Bsp119I | TTCGAA | 1 cut(s) | 359 |
| Bsp1286I | GDGCHC | 1 cut(s) | 133 |
| Bsp143I | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| Bsp68I | TCGCGA | 1 cut(s) | 648 |
| BspACI | CCGC | 4 cut(s) | 9, 300, 387, 750 |
| BspANI | GGCC | 1 cut(s) | 838 |
| BspFNI | CGCG | 1 cut(s) | 648 |
| BspLI | GGNNCC | 2 cut(s) | 13, 734 |
| BspMAI | CTGCAG | 1 cut(s) | 398 |
| BspPI | GGATC | 6 cut(s) | 6, 19, 88, 194, 727, 740 |
| BspT104I | TTCGAA | 1 cut(s) | 359 |
| BspTNI | GGTCTC | 1 cut(s) | 11 |
| BsrBI | CCGCTC | 1 cut(s) | 9 |
| BsrDI | GCAATG | 4 cut(s) | 163, 498, 607, 748 |
| BsrI | ACTGG | 1 cut(s) | 613 |
| BssMI | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| Bst4CI | ACNGT | 3 cut(s) | 290, 428, 553 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 165, 747 |
| BstBAI | YACGTR | 1 cut(s) | 788 |
| BstBI | TTCGAA | 1 cut(s) | 359 |
| BstC8I | GCNNGC | 4 cut(s) | 161, 410, 752, 840 |
| BstFNI | CGCG | 1 cut(s) | 648 |
| BstHHI | GCGC | 1 cut(s) | 101 |
| BstKTI | GATC | 8 cut(s) | 14, 61, 83, 126, 202, 211, 679, 735 |
| BstMAI | GTCTC | 1 cut(s) | 11 |
| BstMBI | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 165, 258, 306, 333, 393, 513, 630, 747, 801 |
| BstSCI | CCNGG | 1 cut(s) | 624 |
| BstSFI | CTRYAG | 1 cut(s) | 394 |
| BstUI | CGCG | 1 cut(s) | 648 |
| BstV1I | GCAGC | 1 cut(s) | 676 |
| BstX2I | RGATCY | 3 cut(s) | 11, 80, 732 |
| BstYI | RGATCY | 3 cut(s) | 11, 80, 732 |
| BsuI | GTATCC | 1 cut(s) | 302 |
| BsuRI | GGCC | 1 cut(s) | 838 |
| BtsIMutI | CAGTG | 2 cut(s) | 286, 424 |
| BtuMI | TCGCGA | 1 cut(s) | 648 |
| Cac8I | GCNNGC | 4 cut(s) | 161, 410, 752, 840 |
| CfoI | GCGC | 1 cut(s) | 101 |
| Cfr13I | GGNCC | 1 cut(s) | 836 |
| Csp6I | GTAC | 1 cut(s) | 370 |
| CviAII | CATG | 7 cut(s) | 70, 215, 230, 310, 621, 700, 846 |
| CviJI | RGCY | 2 cut(s) | 838, 842 |
| CviKI_1 | RGCY | 2 cut(s) | 838, 842 |
| CviQI | GTAC | 1 cut(s) | 370 |
| DpnI | GATC | 8 cut(s) | 13, 60, 82, 125, 201, 210, 678, 734 |
| DpnII | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 551 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 551 |
| Eco31I | GGTCTC | 1 cut(s) | 11 |
| EcoT22I | ATGCAT | 1 cut(s) | 498 |
| FaeI | CATG | 7 cut(s) | 73, 218, 233, 313, 624, 703, 849 |
| FaqI | GGGAC | 1 cut(s) | 640 |
| FatI | CATG | 7 cut(s) | 69, 214, 229, 309, 620, 699, 845 |
| FauI | CCCGC | 1 cut(s) | 743 |
| FbaI | TGATCA | 2 cut(s) | 58, 676 |
| Fnu4HI | GCNGC | 2 cut(s) | 301, 690 |
| Fsp4HI | GCNGC | 2 cut(s) | 301, 690 |
| GlaI | GCGC | 1 cut(s) | 100 |
| GluI | GCNGC | 2 cut(s) | 301, 690 |
| HaeIII | GGCC | 1 cut(s) | 838 |
| HapII | CCGG | 2 cut(s) | 402, 626 |
| HhaI | GCGC | 1 cut(s) | 101 |
| Hin1II | CATG | 7 cut(s) | 73, 218, 233, 313, 624, 703, 849 |
| Hin6I | GCGC | 1 cut(s) | 99 |
| HinP1I | GCGC | 1 cut(s) | 99 |
| HinfI | GANTC | 2 cut(s) | 176, 467 |
| HpaII | CCGG | 2 cut(s) | 402, 626 |
| Hpy166II | GTNNAC | 1 cut(s) | 566 |
| Hpy188I | TCNGA | 4 cut(s) | 16, 54, 128, 763 |
| Hpy188III | TCNNGA | 3 cut(s) | 206, 647, 680 |
| Hpy8I | GTNNAC | 1 cut(s) | 566 |
| HpyAV | CCTTC | 1 cut(s) | 457 |
| HpyCH4III | ACNGT | 3 cut(s) | 290, 428, 553 |
| HpyCH4IV | ACGT | 2 cut(s) | 219, 787 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 165, 258, 306, 333, 393, 513, 630, 747, 801 |
| HpySE526I | ACGT | 2 cut(s) | 219, 787 |
| Hsp92II | CATG | 7 cut(s) | 73, 218, 233, 313, 624, 703, 849 |
| HspAI | GCGC | 1 cut(s) | 99 |
| Ksp22I | TGATCA | 2 cut(s) | 58, 676 |
| Kzo9I | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| LmnI | GCTCC | 3 cut(s) | 257, 332, 601 |
| Lsp1109I | GCAGC | 1 cut(s) | 676 |
| LweI | GCATC | 1 cut(s) | 505 |
| MaeII | ACGT | 2 cut(s) | 219, 787 |
| MaeIII | GTNAC | 3 cut(s) | 377, 428, 446 |
| MalI | GATC | 8 cut(s) | 13, 60, 82, 125, 201, 210, 678, 734 |
| MbiI | CCGCTC | 1 cut(s) | 9 |
| MboI | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| MfeI | CAATTG | 1 cut(s) | 475 |
| MflI | RGATCY | 3 cut(s) | 11, 80, 732 |
| MhlI | GDGCHC | 1 cut(s) | 133 |
| MluCI | AATT | 5 cut(s) | 88, 415, 475, 502, 769 |
| MnlI | CCTC | 9 cut(s) | 108, 213, 234, 398, 714, 746, 757, 827, 853 |
| Mph1103I | ATGCAT | 1 cut(s) | 498 |
| MroXI | GAANNNNTTC | 1 cut(s) | 419 |
| MseI | TTAA | 1 cut(s) | 591 |
| MslI | CAYNNNNRTG | 4 cut(s) | 54, 74, 477, 790 |
| MspI | CCGG | 2 cut(s) | 402, 626 |
| MspR9I | CCNGG | 1 cut(s) | 626 |
| MunI | CAATTG | 1 cut(s) | 475 |
| Mva1269I | GAATGC | 1 cut(s) | 389 |
| MvnI | CGCG | 1 cut(s) | 648 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 165, 258, 306, 333, 393, 513, 630, 747, 801 |
| NciI | CCSGG | 1 cut(s) | 626 |
| NdeII | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| NlaIII | CATG | 7 cut(s) | 73, 218, 233, 313, 624, 703, 849 |
| NlaIV | GGNNCC | 2 cut(s) | 13, 734 |
| NmuCI | GTSAC | 1 cut(s) | 377 |
| NruI | TCGCGA | 1 cut(s) | 648 |
| NsiI | ATGCAT | 1 cut(s) | 498 |
| NspV | TTCGAA | 1 cut(s) | 359 |
| OliI | CACNNNNGTG | 2 cut(s) | 477, 790 |
| PctI | GAATGC | 1 cut(s) | 389 |
| PdmI | GAANNNNTTC | 1 cut(s) | 419 |
| PfeI | GAWTC | 2 cut(s) | 176, 467 |
| PkrI | GCNGC | 2 cut(s) | 302, 691 |
| Ppu21I | YACGTR | 1 cut(s) | 788 |
| PspN4I | GGNNCC | 2 cut(s) | 13, 734 |
| PspPI | GGNCC | 1 cut(s) | 836 |
| PstI | CTGCAG | 1 cut(s) | 398 |
| PsuI | RGATCY | 3 cut(s) | 11, 80, 732 |
| RruI | TCGCGA | 1 cut(s) | 648 |
| RsaI | GTAC | 1 cut(s) | 371 |
| RsaNI | GTAC | 1 cut(s) | 370 |
| RseI | CAYNNNNRTG | 4 cut(s) | 54, 74, 477, 790 |
| SaqAI | TTAA | 1 cut(s) | 591 |
| SatI | GCNGC | 2 cut(s) | 301, 690 |
| Sau3AI | GATC | 8 cut(s) | 11, 58, 80, 123, 199, 208, 676, 732 |
| Sau96I | GGNCC | 1 cut(s) | 836 |
| ScrFI | CCNGG | 1 cut(s) | 626 |
| SduI | GDGCHC | 1 cut(s) | 133 |
| SetI | ASST | 5 cut(s) | 119, 136, 222, 768, 790 |
| SfaNI | GCATC | 1 cut(s) | 505 |
| SfcI | CTRYAG | 1 cut(s) | 394 |
| SfuI | TTCGAA | 1 cut(s) | 359 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 54, 74, 477, 790 |
| Sse9I | AATT | 5 cut(s) | 88, 415, 475, 502, 769 |
| SsiI | CCGC | 4 cut(s) | 9, 300, 387, 750 |
| StyD4I | CCNGG | 1 cut(s) | 624 |
| TaaI | ACNGT | 3 cut(s) | 290, 428, 553 |
| TaiI | ACGT | 2 cut(s) | 222, 790 |
| TaqI | TCGA | 3 cut(s) | 153, 359, 531 |
| TasI | AATT | 5 cut(s) | 88, 415, 475, 502, 769 |
| TauI | GCSGC | 1 cut(s) | 303 |
| TfiI | GAWTC | 2 cut(s) | 176, 467 |
| Tru1I | TTAA | 1 cut(s) | 591 |
| Tru9I | TTAA | 1 cut(s) | 591 |
| TscAI | CASTG | 2 cut(s) | 293, 431 |
| TseFI | GTSAC | 1 cut(s) | 377 |
| TseI | GCWGC | 1 cut(s) | 689 |
| Tsp45I | GTSAC | 1 cut(s) | 377 |
| TspDTI | ATGAA | 1 cut(s) | 609 |
| TspGWI | ACGGA | 1 cut(s) | 127 |
| TspRI | CASTG | 2 cut(s) | 293, 431 |
| XapI | RAATTY | 3 cut(s) | 88, 415, 769 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 187 |
| XmnI | GAANNNNTTC | 1 cut(s) | 419 |
| Zsp2I | ATGCAT | 1 cut(s) | 498 |