pycom12g10770

RING finger and CHY zinc finger domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
12817069 .. 12819938
2870 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g10770.8

Sequence Viewer

Length: 1110 bp
ATGGTGAAGGGTGTAATTATTACCGGGAAACGCTGCCGTGTCGCCTCGTCATCAGTTTCGTCACTCCAACAAGAAAAATATCAGAAACTGATAAAACGCACCTCATTTTCTCATCAGGTGCTCTCCGCAGCAGCTTTGCCTTTTTACTTGAAAGCTCTCTGCAAAGCCAAATTGCAAGGCCTTCCCCTTCGGCCTTCCTCTCTCTTCTCGCCATTTTTAGTTACAGTTCGCTTCAAGCTTCAATTTTCTCTTCTGGGTTACCTAGTTTTCAGCTTATTTAGGCGAATGGACGGCGGATTCGAGCCCCAGGTCTCCATTGACGACGACCGTTCTCACCAGAAAGTCAACTCTCTCACCGAGATGGTATCTGGGAATTTCGGGTGCGCGCATTACAGACGGAGGTGTAAGATCAGAGCACCCTGCTGTGATCAGATATTCGATTGCAGGCATTGCCATAACGAAGCTAAGAATTCATTGGAAGTTGATCCTCTTGATCGCCATGACGTTCCTCGCCACGATGTGAAAAGGATCATCTGCTCCTTGTGCAACAAAGAACAAGATGTTCAACAGCTCTGTATCCAATGTGGGGTTTGCATGGGAAACTATTTTTGCTCCAAATGCAAGTTCTTTGACGATGACGTTTCGAAGAAACAGCATCATTGTGACGAATGCGGTATCTGCAGAACTGGAGGTGGGGAGAATTTTTTCCACTGTAACAAATGTGGATGTTGTTACTCAAACGCGTTGAAGGATTCACATAACTGTGTGGAAAAAGCTATGCATCATAATTGCCCTGTGTGCTTTGAGTTTCTTTTCGATACAAGGGAAGACATTGCTGTCTTGCGGTACTCGTGCCCAGTTTGCTCAAAATCATTCCGCGATATGTCCCGTGTGTGGGAAAAACTTGATGAGGAGGTTGCGGGGACTCCCATGCCTCTAAAGTATCTAAATAAGATGGTTTGGATCCTCTGCAACGACTGCGGAGAAATGTCTGAGGTCAATTTCCACATTTTGGGGCACAAGTGCCCCAAGTGCAAATCCTTCAATACAAGGAAAACACGAGGAGGGCCAGCATCATGCTCGTCAAGGATTACTGCAATGATGAGGTGA
Functional Annotation

Protein Analysis

370

Amino Acids

42.05

Weight (kDa)

8.86

Isoelectric Point (pI)

54.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 836
AccB7I CCANNNNNTGG 1 cut(s) 1012
AccII CGCG 3 cut(s) 386, 743, 879
AciI CCGC 7 cut(s) 126, 294, 672, 844, 877, 920, 981
AclWI GGATC 4 cut(s) 479, 536, 958, 971
AcsI RAATTY 3 cut(s) 373, 469, 700
AdeI CACNNNGTG 1 cut(s) 520
AfaI GTAC 1 cut(s) 848
AfiI CCNNNNNNNGG 4 cut(s) 586, 894, 895, 1012
AflIII ACRYGT 1 cut(s) 741
AgsI TTSAA 6 cut(s) 151, 235, 242, 566, 748, 1045
AjnI CCWGG 1 cut(s) 306
AjuI GAANNNNNNNTTGG 2 cut(s) 608, 640
AluBI AGCT 7 cut(s) 134, 155, 238, 273, 464, 571, 776
AluI AGCT 7 cut(s) 134, 155, 238, 273, 464, 571, 776
Alw21I GWGCWC 2 cut(s) 123, 418
Alw26I GTCTC 1 cut(s) 316
AlwI GGATC 4 cut(s) 479, 536, 958, 971
AlwNI CAGNNNCTG 1 cut(s) 88
AoxI GGCC 3 cut(s) 178, 191, 1067
ApeKI GCWGC 3 cut(s) 33, 128, 131
ApoI RAATTY 3 cut(s) 373, 469, 700
ArsI GACNNNNNNTTYG 2 cut(s) 281, 313
Asp700I GAANNNNTTC 1 cut(s) 704
AspLEI GCGC 2 cut(s) 386, 388
AspS9I GGNCC 1 cut(s) 1067
AsuC2I CCSGG 1 cut(s) 25
AsuHPI GGTGA 3 cut(s) 16, 326, 346
AsuII TTCGAA 1 cut(s) 644
BaeGI GKGCMC 3 cut(s) 857, 1020, 1028
BamHI GGATCC 1 cut(s) 963
BanII GRGCYC 1 cut(s) 306
BauI CACGAG 2 cut(s) 850, 1059
BbsI GAAGAC 1 cut(s) 834
Bbv12I GWGCWC 2 cut(s) 123, 418
BbvI GCAGC 3 cut(s) 20, 140, 143
BccI CCATC 2 cut(s) 355, 949
BceAI ACGGC 2 cut(s) 21, 307
BcgI CGANNNNNNTGC 2 cut(s) 1062, 1096
BciT130I CCWGG 1 cut(s) 308
BciVI GTATCC 1 cut(s) 587
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 1 cut(s) 25
BcoDI GTCTC 1 cut(s) 316
BfaI CTAG 1 cut(s) 263
BfmI CTRYAG 1 cut(s) 679
BfuI GTATCC 1 cut(s) 587
BisI GCNGC 3 cut(s) 34, 129, 132
BlsI GCNGC 3 cut(s) 35, 130, 133
Bme1390I CCNGG 2 cut(s) 25, 308
BmgT120I GGNCC 1 cut(s) 1067
BmiI GGNNCC 1 cut(s) 965
BmrFI CCNGG 2 cut(s) 25, 308
BmrI ACTGGG 1 cut(s) 851
BmsI GCATC 3 cut(s) 664, 790, 1082
BmuI ACTGGG 1 cut(s) 851
BpiI GAAGAC 1 cut(s) 834
BpmI CTGGAG 1 cut(s) 708
Bpu14I TTCGAA 1 cut(s) 644
BpuMI CCSGG 1 cut(s) 25
BsaI GGTCTC 1 cut(s) 316
BsaJI CCNNGG 1 cut(s) 306
Bsc4I CCNNNNNNNGG 4 cut(s) 586, 894, 895, 1012
Bse1I ACTGG 2 cut(s) 691, 857
Bse3DI GCAATG 3 cut(s) 448, 831, 1104
BseBI CCWGG 1 cut(s) 308
BseDI CCNNGG 1 cut(s) 306
BseGI GGATG 1 cut(s) 731
BseLI CCNNNNNNNGG 4 cut(s) 586, 894, 895, 1012
BseMI GCAATG 3 cut(s) 448, 831, 1104
BseMII CTCAG 1 cut(s) 984
BseNI ACTGG 2 cut(s) 691, 857
BsePI GCGCGC 1 cut(s) 384
BseRI GAGGAG 2 cut(s) 926, 1077
BseSI GKGCMC 3 cut(s) 857, 1020, 1028
BseXI GCAGC 3 cut(s) 20, 140, 143
Bsh1236I CGCG 3 cut(s) 386, 743, 879
Bsh1285I CGRYCG 1 cut(s) 328
BshFI GGCC 3 cut(s) 180, 193, 1069
BsiEI CGRYCG 1 cut(s) 328
BsiHKAI GWGCWC 2 cut(s) 123, 418
BsiSI CCGG 1 cut(s) 24
BslFI GGGAC 2 cut(s) 871, 937
BslI CCNNNNNNNGG 4 cut(s) 586, 894, 895, 1012
BsmAI GTCTC 1 cut(s) 316
BsmFI GGGAC 2 cut(s) 871, 937
BsmI GAATGC 1 cut(s) 674
BsnI GGCC 3 cut(s) 180, 193, 1069
Bso31I GGTCTC 1 cut(s) 316
Bsp119I TTCGAA 1 cut(s) 644
Bsp1286I GDGCHC 6 cut(s) 123, 306, 418, 857, 1020, 1028
Bsp143I GATC 6 cut(s) 408, 427, 484, 493, 528, 963
BspACI CCGC 7 cut(s) 126, 294, 672, 844, 877, 920, 981
BspANI GGCC 3 cut(s) 180, 193, 1069
BspCNI CTCAG 1 cut(s) 985
BspFNI CGCG 3 cut(s) 386, 743, 879
BspLI GGNNCC 1 cut(s) 965
BspMAI CTGCAG 1 cut(s) 683
BspPI GGATC 4 cut(s) 479, 536, 958, 971
BspT104I TTCGAA 1 cut(s) 644
BspTNI GGTCTC 1 cut(s) 316
BsrDI GCAATG 3 cut(s) 448, 831, 1104
BsrI ACTGG 2 cut(s) 691, 857
BssECI CCNNGG 1 cut(s) 306
BssHII GCGCGC 1 cut(s) 384
BssMI GATC 6 cut(s) 408, 427, 484, 493, 528, 963
BssSI CACGAG 2 cut(s) 850, 1059
Bst2BI CACGAG 2 cut(s) 850, 1059
Bst2UI CCWGG 1 cut(s) 308
Bst4CI ACNGT 4 cut(s) 226, 329, 713, 764
Bst6I CTCTTC 2 cut(s) 209, 255
BstAPI GCANNNNNTGC 2 cut(s) 450, 978
BstBI TTCGAA 1 cut(s) 644
BstC8I GCNNGC 3 cut(s) 386, 446, 1071
BstDEI CTNAG 2 cut(s) 465, 993
BstEII GGTNACC 1 cut(s) 257
BstF5I GGATG 1 cut(s) 731
BstFNI CGCG 3 cut(s) 386, 743, 879
BstHHI GCGC 2 cut(s) 386, 388
BstKTI GATC 6 cut(s) 411, 430, 487, 496, 531, 966
BstMAI GTCTC 1 cut(s) 316
BstMBI GATC 6 cut(s) 408, 427, 484, 493, 528, 963
BstMCI CGRYCG 1 cut(s) 328
BstMWI GCNNNNNNNGC 8 cut(s) 450, 543, 618, 678, 798, 861, 978, 1032
BstNI CCWGG 1 cut(s) 308
BstPI GGTNACC 1 cut(s) 257
BstSCI CCNGG 2 cut(s) 23, 306
BstSFI CTRYAG 1 cut(s) 679
BstSLI GKGCMC 3 cut(s) 857, 1020, 1028
BstUI CGCG 3 cut(s) 386, 743, 879
BstV1I GCAGC 3 cut(s) 20, 140, 143
BstV2I GAAGAC 1 cut(s) 834
BstX2I RGATCY 1 cut(s) 963
BstYI RGATCY 1 cut(s) 963
BsuI GTATCC 1 cut(s) 587
BsuRI GGCC 3 cut(s) 180, 193, 1069
BtsCI GGATG 1 cut(s) 731
BtsIMutI CAGTG 1 cut(s) 709
Cac8I GCNNGC 3 cut(s) 386, 446, 1071
CaiI CAGNNNCTG 1 cut(s) 88
CfoI GCGC 2 cut(s) 386, 388
Cfr13I GGNCC 1 cut(s) 1067
Csp6I GTAC 1 cut(s) 847
CviAII CATG 4 cut(s) 500, 595, 931, 1077
CviQI GTAC 1 cut(s) 847
DdeI CTNAG 2 cut(s) 465, 993
DpnI GATC 6 cut(s) 410, 429, 486, 495, 530, 965
DpnII GATC 6 cut(s) 408, 427, 484, 493, 528, 963
DraIII CACNNNGTG 1 cut(s) 520
DrdI GACNNNNNNGTC 1 cut(s) 836
DseDI GACNNNNNNGTC 1 cut(s) 836
Eam1104I CTCTTC 2 cut(s) 209, 255
EarI CTCTTC 2 cut(s) 209, 255
EciI GGCGGA 1 cut(s) 309
Eco147I AGGCCT 1 cut(s) 180
Eco24I GRGCYC 1 cut(s) 306
Eco31I GGTCTC 1 cut(s) 316
Eco91I GGTNACC 1 cut(s) 257
EcoO65I GGTNACC 1 cut(s) 257
EcoRI GAATTC 1 cut(s) 469
EcoRII CCWGG 1 cut(s) 306
EcoT22I ATGCAT 1 cut(s) 783
EcoT38I GRGCYC 1 cut(s) 306
FaeI CATG 4 cut(s) 503, 598, 934, 1080
FaiI YATR 9 cut(s) 456, 501, 596, 759, 779, 786, 884, 932, 1078
FaqI GGGAC 2 cut(s) 871, 937
FatI CATG 4 cut(s) 499, 594, 930, 1076
FauI CCCGC 1 cut(s) 913
FbaI TGATCA 1 cut(s) 427
Fnu4HI GCNGC 3 cut(s) 34, 129, 132
FokI GGATG 1 cut(s) 738
FriOI GRGCYC 1 cut(s) 306
Fsp4HI GCNGC 3 cut(s) 34, 129, 132
FspBI CTAG 1 cut(s) 263
GlaI GCGC 2 cut(s) 385, 387
GluI GCNGC 3 cut(s) 34, 129, 132
GsuI CTGGAG 1 cut(s) 708
HaeIII GGCC 3 cut(s) 180, 193, 1069
HapII CCGG 1 cut(s) 24
HhaI GCGC 2 cut(s) 386, 388
Hin1II CATG 4 cut(s) 503, 598, 934, 1080
Hin6I GCGC 2 cut(s) 384, 386
HinP1I GCGC 2 cut(s) 384, 386
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 3 cut(s) 297, 752, 925
HpaII CCGG 1 cut(s) 24
HphI GGTGA 3 cut(s) 16, 326, 346
Hpy166II GTNNAC 1 cut(s) 346
Hpy188I TCNGA 4 cut(s) 84, 413, 432, 994
Hpy188III TCNNGA 1 cut(s) 491
Hpy8I GTNNAC 1 cut(s) 346
Hpy99I CGWCG 1 cut(s) 326
HpyAV CCTTC 5 cut(s) 191, 197, 204, 742, 1051
HpyCH4III ACNGT 4 cut(s) 226, 329, 713, 764
HpyCH4IV ACGT 2 cut(s) 504, 639
HpyF10VI GCNNNNNNNGC 8 cut(s) 450, 543, 618, 678, 798, 861, 978, 1032
HpyF3I CTNAG 2 cut(s) 465, 993
HpySE526I ACGT 2 cut(s) 504, 639
Hsp92II CATG 4 cut(s) 503, 598, 934, 1080
HspAI GCGC 2 cut(s) 384, 386
Ksp22I TGATCA 1 cut(s) 427
Kzo9I GATC 6 cut(s) 408, 427, 484, 493, 528, 963
LmnI GCTCC 2 cut(s) 542, 617
Lsp1109I GCAGC 3 cut(s) 20, 140, 143
LweI GCATC 3 cut(s) 664, 790, 1082
MaeI CTAG 1 cut(s) 263
MaeII ACGT 2 cut(s) 504, 639
MaeIII GTNAC 6 cut(s) 60, 220, 257, 662, 713, 731
MalI GATC 6 cut(s) 410, 429, 486, 495, 530, 965
MboI GATC 6 cut(s) 408, 427, 484, 493, 528, 963
MboII GAAGA 4 cut(s) 196, 242, 658, 839
MflI RGATCY 1 cut(s) 963
MhlI GDGCHC 6 cut(s) 123, 306, 418, 857, 1020, 1028
MluCI AATT 8 cut(s) 15, 170, 242, 373, 469, 700, 787, 1000
MluI ACGCGT 1 cut(s) 741
MlyI GAGTC 1 cut(s) 919
MmeI TCCRAC 1 cut(s) 91
Mph1103I ATGCAT 1 cut(s) 783
MroXI GAANNNNTTC 1 cut(s) 704
MslI CAYNNNNRTG 3 cut(s) 359, 660, 762
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 2 cut(s) 25, 308
Mva1269I GAATGC 1 cut(s) 674
MvaI CCWGG 1 cut(s) 308
MvnI CGCG 3 cut(s) 386, 743, 879
MwoI GCNNNNNNNGC 8 cut(s) 450, 543, 618, 678, 798, 861, 978, 1032
NciI CCSGG 1 cut(s) 25
NdeII GATC 6 cut(s) 408, 427, 484, 493, 528, 963
NlaIII CATG 4 cut(s) 503, 598, 934, 1080
NlaIV GGNNCC 1 cut(s) 965
NmuCI GTSAC 2 cut(s) 60, 662
NsiI ATGCAT 1 cut(s) 783
NspV TTCGAA 1 cut(s) 644
PauI GCGCGC 1 cut(s) 384
PceI AGGCCT 1 cut(s) 180
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PctI GAATGC 1 cut(s) 674
PdmI GAANNNNTTC 1 cut(s) 704
PfeI GAWTC 2 cut(s) 297, 752
PflMI CCANNNNNTGG 1 cut(s) 1012
PkrI GCNGC 3 cut(s) 35, 130, 133
PleI GAGTC 1 cut(s) 919
PpsI GAGTC 1 cut(s) 919
Psp6I CCWGG 1 cut(s) 306
PspEI GGTNACC 1 cut(s) 257
PspGI CCWGG 1 cut(s) 306
PspN4I GGNNCC 1 cut(s) 965
PspPI GGNCC 1 cut(s) 1067
PstI CTGCAG 1 cut(s) 683
PstNI CAGNNNCTG 1 cut(s) 88
PsuI RGATCY 1 cut(s) 963
PteI GCGCGC 1 cut(s) 384
RsaI GTAC 1 cut(s) 848
RsaNI GTAC 1 cut(s) 847
RseI CAYNNNNRTG 3 cut(s) 359, 660, 762
SatI GCNGC 3 cut(s) 34, 129, 132
Sau3AI GATC 6 cut(s) 408, 427, 484, 493, 528, 963
Sau96I GGNCC 1 cut(s) 1067
SchI GAGTC 1 cut(s) 919
ScrFI CCNGG 2 cut(s) 25, 308
SduI GDGCHC 6 cut(s) 123, 306, 418, 857, 1020, 1028
SfaNI GCATC 3 cut(s) 664, 790, 1082
SfcI CTRYAG 1 cut(s) 679
SfuI TTCGAA 1 cut(s) 644
SmiMI CAYNNNNRTG 3 cut(s) 359, 660, 762
Sse9I AATT 8 cut(s) 15, 170, 242, 373, 469, 700, 787, 1000
SseBI AGGCCT 1 cut(s) 180
SsiI CCGC 7 cut(s) 126, 294, 672, 844, 877, 920, 981
SspMI CTAG 1 cut(s) 263
StuI AGGCCT 1 cut(s) 180
StyD4I CCNGG 2 cut(s) 23, 306
TaaI ACNGT 4 cut(s) 226, 329, 713, 764
TaiI ACGT 2 cut(s) 507, 642
TaqI TCGA 4 cut(s) 300, 438, 644, 816
TasI AATT 8 cut(s) 15, 170, 242, 373, 469, 700, 787, 1000
TfiI GAWTC 2 cut(s) 297, 752
TscAI CASTG 1 cut(s) 716
TseFI GTSAC 2 cut(s) 60, 662
TseI GCWGC 3 cut(s) 33, 128, 131
Tsp45I GTSAC 2 cut(s) 60, 662
TspDTI ATGAA 1 cut(s) 462
TspGWI ACGGA 1 cut(s) 412
TspRI CASTG 1 cut(s) 716
Van91I CCANNNNNTGG 1 cut(s) 1012
XapI RAATTY 3 cut(s) 373, 469, 700
XmnI GAANNNNTTC 1 cut(s) 704
XspI CTAG 1 cut(s) 263
Zsp2I ATGCAT 1 cut(s) 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.