RING finger and CHY zinc finger domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22920 AT5G22920 |
| fragaria_vesca | FvH4_6g16750 |
| malus_domestica | MD12G1107600.v1.1 |
| prunus_persica | Prupe.7G126100_v2.0.a1 |
| pyrus_communis | pycom04g08360 pycom12g10770 |
| rosa_chinensis | RchiOBHm_Chr3g0470691 RchiOBHm_Chr5g0056891 |
| rosa_laevigata | RLG00000024247 |
| rosa_multiflora | Rmu_sc0006168.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00023410 Rroxscaffold_6G00410580 |
| rosa_rugosa | Rorug03G0112100 Rorug03G0112200 Rorug05G0303400 Rorug05G0303500 |
| rosa_samantha | Rh3AG161700 Rh3BG186200 Rh3CG176600 Rh3DG188900 Rh5AG373400 Rh5CG407600 Rh5DG397700 |
| rosa_wichuraiana | Rw0G004620 Rw3G015250 Rw5G035110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 836 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1012 |
| AccII | CGCG | 3 cut(s) | 386, 743, 879 |
| AciI | CCGC | 7 cut(s) | 126, 294, 672, 844, 877, 920, 981 |
| AclWI | GGATC | 4 cut(s) | 479, 536, 958, 971 |
| AcsI | RAATTY | 3 cut(s) | 373, 469, 700 |
| AdeI | CACNNNGTG | 1 cut(s) | 520 |
| AfaI | GTAC | 1 cut(s) | 848 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 586, 894, 895, 1012 |
| AflIII | ACRYGT | 1 cut(s) | 741 |
| AgsI | TTSAA | 6 cut(s) | 151, 235, 242, 566, 748, 1045 |
| AjnI | CCWGG | 1 cut(s) | 306 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 608, 640 |
| AluBI | AGCT | 7 cut(s) | 134, 155, 238, 273, 464, 571, 776 |
| AluI | AGCT | 7 cut(s) | 134, 155, 238, 273, 464, 571, 776 |
| Alw21I | GWGCWC | 2 cut(s) | 123, 418 |
| Alw26I | GTCTC | 1 cut(s) | 316 |
| AlwI | GGATC | 4 cut(s) | 479, 536, 958, 971 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 88 |
| AoxI | GGCC | 3 cut(s) | 178, 191, 1067 |
| ApeKI | GCWGC | 3 cut(s) | 33, 128, 131 |
| ApoI | RAATTY | 3 cut(s) | 373, 469, 700 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 281, 313 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 704 |
| AspLEI | GCGC | 2 cut(s) | 386, 388 |
| AspS9I | GGNCC | 1 cut(s) | 1067 |
| AsuC2I | CCSGG | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 326, 346 |
| AsuII | TTCGAA | 1 cut(s) | 644 |
| BaeGI | GKGCMC | 3 cut(s) | 857, 1020, 1028 |
| BamHI | GGATCC | 1 cut(s) | 963 |
| BanII | GRGCYC | 1 cut(s) | 306 |
| BauI | CACGAG | 2 cut(s) | 850, 1059 |
| BbsI | GAAGAC | 1 cut(s) | 834 |
| Bbv12I | GWGCWC | 2 cut(s) | 123, 418 |
| BbvI | GCAGC | 3 cut(s) | 20, 140, 143 |
| BccI | CCATC | 2 cut(s) | 355, 949 |
| BceAI | ACGGC | 2 cut(s) | 21, 307 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1062, 1096 |
| BciT130I | CCWGG | 1 cut(s) | 308 |
| BciVI | GTATCC | 1 cut(s) | 587 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BcnI | CCSGG | 1 cut(s) | 25 |
| BcoDI | GTCTC | 1 cut(s) | 316 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BfmI | CTRYAG | 1 cut(s) | 679 |
| BfuI | GTATCC | 1 cut(s) | 587 |
| BisI | GCNGC | 3 cut(s) | 34, 129, 132 |
| BlsI | GCNGC | 3 cut(s) | 35, 130, 133 |
| Bme1390I | CCNGG | 2 cut(s) | 25, 308 |
| BmgT120I | GGNCC | 1 cut(s) | 1067 |
| BmiI | GGNNCC | 1 cut(s) | 965 |
| BmrFI | CCNGG | 2 cut(s) | 25, 308 |
| BmrI | ACTGGG | 1 cut(s) | 851 |
| BmsI | GCATC | 3 cut(s) | 664, 790, 1082 |
| BmuI | ACTGGG | 1 cut(s) | 851 |
| BpiI | GAAGAC | 1 cut(s) | 834 |
| BpmI | CTGGAG | 1 cut(s) | 708 |
| Bpu14I | TTCGAA | 1 cut(s) | 644 |
| BpuMI | CCSGG | 1 cut(s) | 25 |
| BsaI | GGTCTC | 1 cut(s) | 316 |
| BsaJI | CCNNGG | 1 cut(s) | 306 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 586, 894, 895, 1012 |
| Bse1I | ACTGG | 2 cut(s) | 691, 857 |
| Bse3DI | GCAATG | 3 cut(s) | 448, 831, 1104 |
| BseBI | CCWGG | 1 cut(s) | 308 |
| BseDI | CCNNGG | 1 cut(s) | 306 |
| BseGI | GGATG | 1 cut(s) | 731 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 586, 894, 895, 1012 |
| BseMI | GCAATG | 3 cut(s) | 448, 831, 1104 |
| BseMII | CTCAG | 1 cut(s) | 984 |
| BseNI | ACTGG | 2 cut(s) | 691, 857 |
| BsePI | GCGCGC | 1 cut(s) | 384 |
| BseRI | GAGGAG | 2 cut(s) | 926, 1077 |
| BseSI | GKGCMC | 3 cut(s) | 857, 1020, 1028 |
| BseXI | GCAGC | 3 cut(s) | 20, 140, 143 |
| Bsh1236I | CGCG | 3 cut(s) | 386, 743, 879 |
| Bsh1285I | CGRYCG | 1 cut(s) | 328 |
| BshFI | GGCC | 3 cut(s) | 180, 193, 1069 |
| BsiEI | CGRYCG | 1 cut(s) | 328 |
| BsiHKAI | GWGCWC | 2 cut(s) | 123, 418 |
| BsiSI | CCGG | 1 cut(s) | 24 |
| BslFI | GGGAC | 2 cut(s) | 871, 937 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 586, 894, 895, 1012 |
| BsmAI | GTCTC | 1 cut(s) | 316 |
| BsmFI | GGGAC | 2 cut(s) | 871, 937 |
| BsmI | GAATGC | 1 cut(s) | 674 |
| BsnI | GGCC | 3 cut(s) | 180, 193, 1069 |
| Bso31I | GGTCTC | 1 cut(s) | 316 |
| Bsp119I | TTCGAA | 1 cut(s) | 644 |
| Bsp1286I | GDGCHC | 6 cut(s) | 123, 306, 418, 857, 1020, 1028 |
| Bsp143I | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| BspACI | CCGC | 7 cut(s) | 126, 294, 672, 844, 877, 920, 981 |
| BspANI | GGCC | 3 cut(s) | 180, 193, 1069 |
| BspCNI | CTCAG | 1 cut(s) | 985 |
| BspFNI | CGCG | 3 cut(s) | 386, 743, 879 |
| BspLI | GGNNCC | 1 cut(s) | 965 |
| BspMAI | CTGCAG | 1 cut(s) | 683 |
| BspPI | GGATC | 4 cut(s) | 479, 536, 958, 971 |
| BspT104I | TTCGAA | 1 cut(s) | 644 |
| BspTNI | GGTCTC | 1 cut(s) | 316 |
| BsrDI | GCAATG | 3 cut(s) | 448, 831, 1104 |
| BsrI | ACTGG | 2 cut(s) | 691, 857 |
| BssECI | CCNNGG | 1 cut(s) | 306 |
| BssHII | GCGCGC | 1 cut(s) | 384 |
| BssMI | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| BssSI | CACGAG | 2 cut(s) | 850, 1059 |
| Bst2BI | CACGAG | 2 cut(s) | 850, 1059 |
| Bst2UI | CCWGG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 4 cut(s) | 226, 329, 713, 764 |
| Bst6I | CTCTTC | 2 cut(s) | 209, 255 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 450, 978 |
| BstBI | TTCGAA | 1 cut(s) | 644 |
| BstC8I | GCNNGC | 3 cut(s) | 386, 446, 1071 |
| BstDEI | CTNAG | 2 cut(s) | 465, 993 |
| BstEII | GGTNACC | 1 cut(s) | 257 |
| BstF5I | GGATG | 1 cut(s) | 731 |
| BstFNI | CGCG | 3 cut(s) | 386, 743, 879 |
| BstHHI | GCGC | 2 cut(s) | 386, 388 |
| BstKTI | GATC | 6 cut(s) | 411, 430, 487, 496, 531, 966 |
| BstMAI | GTCTC | 1 cut(s) | 316 |
| BstMBI | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| BstMCI | CGRYCG | 1 cut(s) | 328 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 450, 543, 618, 678, 798, 861, 978, 1032 |
| BstNI | CCWGG | 1 cut(s) | 308 |
| BstPI | GGTNACC | 1 cut(s) | 257 |
| BstSCI | CCNGG | 2 cut(s) | 23, 306 |
| BstSFI | CTRYAG | 1 cut(s) | 679 |
| BstSLI | GKGCMC | 3 cut(s) | 857, 1020, 1028 |
| BstUI | CGCG | 3 cut(s) | 386, 743, 879 |
| BstV1I | GCAGC | 3 cut(s) | 20, 140, 143 |
| BstV2I | GAAGAC | 1 cut(s) | 834 |
| BstX2I | RGATCY | 1 cut(s) | 963 |
| BstYI | RGATCY | 1 cut(s) | 963 |
| BsuI | GTATCC | 1 cut(s) | 587 |
| BsuRI | GGCC | 3 cut(s) | 180, 193, 1069 |
| BtsCI | GGATG | 1 cut(s) | 731 |
| BtsIMutI | CAGTG | 1 cut(s) | 709 |
| Cac8I | GCNNGC | 3 cut(s) | 386, 446, 1071 |
| CaiI | CAGNNNCTG | 1 cut(s) | 88 |
| CfoI | GCGC | 2 cut(s) | 386, 388 |
| Cfr13I | GGNCC | 1 cut(s) | 1067 |
| Csp6I | GTAC | 1 cut(s) | 847 |
| CviAII | CATG | 4 cut(s) | 500, 595, 931, 1077 |
| CviQI | GTAC | 1 cut(s) | 847 |
| DdeI | CTNAG | 2 cut(s) | 465, 993 |
| DpnI | GATC | 6 cut(s) | 410, 429, 486, 495, 530, 965 |
| DpnII | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| DraIII | CACNNNGTG | 1 cut(s) | 520 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 836 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 836 |
| Eam1104I | CTCTTC | 2 cut(s) | 209, 255 |
| EarI | CTCTTC | 2 cut(s) | 209, 255 |
| EciI | GGCGGA | 1 cut(s) | 309 |
| Eco147I | AGGCCT | 1 cut(s) | 180 |
| Eco24I | GRGCYC | 1 cut(s) | 306 |
| Eco31I | GGTCTC | 1 cut(s) | 316 |
| Eco91I | GGTNACC | 1 cut(s) | 257 |
| EcoO65I | GGTNACC | 1 cut(s) | 257 |
| EcoRI | GAATTC | 1 cut(s) | 469 |
| EcoRII | CCWGG | 1 cut(s) | 306 |
| EcoT22I | ATGCAT | 1 cut(s) | 783 |
| EcoT38I | GRGCYC | 1 cut(s) | 306 |
| FaeI | CATG | 4 cut(s) | 503, 598, 934, 1080 |
| FaiI | YATR | 9 cut(s) | 456, 501, 596, 759, 779, 786, 884, 932, 1078 |
| FaqI | GGGAC | 2 cut(s) | 871, 937 |
| FatI | CATG | 4 cut(s) | 499, 594, 930, 1076 |
| FauI | CCCGC | 1 cut(s) | 913 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| Fnu4HI | GCNGC | 3 cut(s) | 34, 129, 132 |
| FokI | GGATG | 1 cut(s) | 738 |
| FriOI | GRGCYC | 1 cut(s) | 306 |
| Fsp4HI | GCNGC | 3 cut(s) | 34, 129, 132 |
| FspBI | CTAG | 1 cut(s) | 263 |
| GlaI | GCGC | 2 cut(s) | 385, 387 |
| GluI | GCNGC | 3 cut(s) | 34, 129, 132 |
| GsuI | CTGGAG | 1 cut(s) | 708 |
| HaeIII | GGCC | 3 cut(s) | 180, 193, 1069 |
| HapII | CCGG | 1 cut(s) | 24 |
| HhaI | GCGC | 2 cut(s) | 386, 388 |
| Hin1II | CATG | 4 cut(s) | 503, 598, 934, 1080 |
| Hin6I | GCGC | 2 cut(s) | 384, 386 |
| HinP1I | GCGC | 2 cut(s) | 384, 386 |
| HincII | GTYRAC | 1 cut(s) | 346 |
| HindII | GTYRAC | 1 cut(s) | 346 |
| HindIII | AAGCTT | 1 cut(s) | 236 |
| HinfI | GANTC | 3 cut(s) | 297, 752, 925 |
| HpaII | CCGG | 1 cut(s) | 24 |
| HphI | GGTGA | 3 cut(s) | 16, 326, 346 |
| Hpy166II | GTNNAC | 1 cut(s) | 346 |
| Hpy188I | TCNGA | 4 cut(s) | 84, 413, 432, 994 |
| Hpy188III | TCNNGA | 1 cut(s) | 491 |
| Hpy8I | GTNNAC | 1 cut(s) | 346 |
| Hpy99I | CGWCG | 1 cut(s) | 326 |
| HpyAV | CCTTC | 5 cut(s) | 191, 197, 204, 742, 1051 |
| HpyCH4III | ACNGT | 4 cut(s) | 226, 329, 713, 764 |
| HpyCH4IV | ACGT | 2 cut(s) | 504, 639 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 450, 543, 618, 678, 798, 861, 978, 1032 |
| HpyF3I | CTNAG | 2 cut(s) | 465, 993 |
| HpySE526I | ACGT | 2 cut(s) | 504, 639 |
| Hsp92II | CATG | 4 cut(s) | 503, 598, 934, 1080 |
| HspAI | GCGC | 2 cut(s) | 384, 386 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| LmnI | GCTCC | 2 cut(s) | 542, 617 |
| Lsp1109I | GCAGC | 3 cut(s) | 20, 140, 143 |
| LweI | GCATC | 3 cut(s) | 664, 790, 1082 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MaeII | ACGT | 2 cut(s) | 504, 639 |
| MaeIII | GTNAC | 6 cut(s) | 60, 220, 257, 662, 713, 731 |
| MalI | GATC | 6 cut(s) | 410, 429, 486, 495, 530, 965 |
| MboI | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| MboII | GAAGA | 4 cut(s) | 196, 242, 658, 839 |
| MflI | RGATCY | 1 cut(s) | 963 |
| MhlI | GDGCHC | 6 cut(s) | 123, 306, 418, 857, 1020, 1028 |
| MluCI | AATT | 8 cut(s) | 15, 170, 242, 373, 469, 700, 787, 1000 |
| MluI | ACGCGT | 1 cut(s) | 741 |
| MlyI | GAGTC | 1 cut(s) | 919 |
| MmeI | TCCRAC | 1 cut(s) | 91 |
| Mph1103I | ATGCAT | 1 cut(s) | 783 |
| MroXI | GAANNNNTTC | 1 cut(s) | 704 |
| MslI | CAYNNNNRTG | 3 cut(s) | 359, 660, 762 |
| MspI | CCGG | 1 cut(s) | 24 |
| MspR9I | CCNGG | 2 cut(s) | 25, 308 |
| Mva1269I | GAATGC | 1 cut(s) | 674 |
| MvaI | CCWGG | 1 cut(s) | 308 |
| MvnI | CGCG | 3 cut(s) | 386, 743, 879 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 450, 543, 618, 678, 798, 861, 978, 1032 |
| NciI | CCSGG | 1 cut(s) | 25 |
| NdeII | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| NlaIII | CATG | 4 cut(s) | 503, 598, 934, 1080 |
| NlaIV | GGNNCC | 1 cut(s) | 965 |
| NmuCI | GTSAC | 2 cut(s) | 60, 662 |
| NsiI | ATGCAT | 1 cut(s) | 783 |
| NspV | TTCGAA | 1 cut(s) | 644 |
| PauI | GCGCGC | 1 cut(s) | 384 |
| PceI | AGGCCT | 1 cut(s) | 180 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 297 |
| PctI | GAATGC | 1 cut(s) | 674 |
| PdmI | GAANNNNTTC | 1 cut(s) | 704 |
| PfeI | GAWTC | 2 cut(s) | 297, 752 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1012 |
| PkrI | GCNGC | 3 cut(s) | 35, 130, 133 |
| PleI | GAGTC | 1 cut(s) | 919 |
| PpsI | GAGTC | 1 cut(s) | 919 |
| Psp6I | CCWGG | 1 cut(s) | 306 |
| PspEI | GGTNACC | 1 cut(s) | 257 |
| PspGI | CCWGG | 1 cut(s) | 306 |
| PspN4I | GGNNCC | 1 cut(s) | 965 |
| PspPI | GGNCC | 1 cut(s) | 1067 |
| PstI | CTGCAG | 1 cut(s) | 683 |
| PstNI | CAGNNNCTG | 1 cut(s) | 88 |
| PsuI | RGATCY | 1 cut(s) | 963 |
| PteI | GCGCGC | 1 cut(s) | 384 |
| RsaI | GTAC | 1 cut(s) | 848 |
| RsaNI | GTAC | 1 cut(s) | 847 |
| RseI | CAYNNNNRTG | 3 cut(s) | 359, 660, 762 |
| SatI | GCNGC | 3 cut(s) | 34, 129, 132 |
| Sau3AI | GATC | 6 cut(s) | 408, 427, 484, 493, 528, 963 |
| Sau96I | GGNCC | 1 cut(s) | 1067 |
| SchI | GAGTC | 1 cut(s) | 919 |
| ScrFI | CCNGG | 2 cut(s) | 25, 308 |
| SduI | GDGCHC | 6 cut(s) | 123, 306, 418, 857, 1020, 1028 |
| SfaNI | GCATC | 3 cut(s) | 664, 790, 1082 |
| SfcI | CTRYAG | 1 cut(s) | 679 |
| SfuI | TTCGAA | 1 cut(s) | 644 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 359, 660, 762 |
| Sse9I | AATT | 8 cut(s) | 15, 170, 242, 373, 469, 700, 787, 1000 |
| SseBI | AGGCCT | 1 cut(s) | 180 |
| SsiI | CCGC | 7 cut(s) | 126, 294, 672, 844, 877, 920, 981 |
| SspMI | CTAG | 1 cut(s) | 263 |
| StuI | AGGCCT | 1 cut(s) | 180 |
| StyD4I | CCNGG | 2 cut(s) | 23, 306 |
| TaaI | ACNGT | 4 cut(s) | 226, 329, 713, 764 |
| TaiI | ACGT | 2 cut(s) | 507, 642 |
| TaqI | TCGA | 4 cut(s) | 300, 438, 644, 816 |
| TasI | AATT | 8 cut(s) | 15, 170, 242, 373, 469, 700, 787, 1000 |
| TfiI | GAWTC | 2 cut(s) | 297, 752 |
| TscAI | CASTG | 1 cut(s) | 716 |
| TseFI | GTSAC | 2 cut(s) | 60, 662 |
| TseI | GCWGC | 3 cut(s) | 33, 128, 131 |
| Tsp45I | GTSAC | 2 cut(s) | 60, 662 |
| TspDTI | ATGAA | 1 cut(s) | 462 |
| TspGWI | ACGGA | 1 cut(s) | 412 |
| TspRI | CASTG | 1 cut(s) | 716 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1012 |
| XapI | RAATTY | 3 cut(s) | 373, 469, 700 |
| XmnI | GAANNNNTTC | 1 cut(s) | 704 |
| XspI | CTAG | 1 cut(s) | 263 |
| Zsp2I | ATGCAT | 1 cut(s) | 783 |