zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22920 AT5G22920 |
| fragaria_vesca | FvH4_6g16750 |
| malus_domestica | MD12G1107600.v1.1 |
| prunus_persica | Prupe.7G126100_v2.0.a1 |
| pyrus_communis | pycom04g08360 pycom12g10770 |
| rosa_chinensis | RchiOBHm_Chr3g0470691 RchiOBHm_Chr5g0056891 |
| rosa_laevigata | RLG00000024247 |
| rosa_multiflora | Rmu_sc0006168.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00023410 Rroxscaffold_6G00410580 |
| rosa_rugosa | Rorug03G0112100 Rorug03G0112200 Rorug05G0303400 Rorug05G0303500 |
| rosa_samantha | Rh3AG161700 Rh3BG186200 Rh3CG176600 Rh3DG188900 Rh5AG373400 Rh5CG407600 Rh5DG397700 |
| rosa_wichuraiana | Rw0G004620 Rw3G015250 Rw5G035110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 24, 164 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 77 |
| AgsI | TTSAA | 1 cut(s) | 172 |
| AleI | CACNNNNGTG | 1 cut(s) | 209 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 84, 116 |
| AluBI | AGCT | 2 cut(s) | 30, 238 |
| AluI | AGCT | 2 cut(s) | 30, 238 |
| Alw21I | GWGCWC | 1 cut(s) | 70 |
| AoxI | GGCC | 4 cut(s) | 3, 94, 149, 165 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| AspLEI | GCGC | 1 cut(s) | 49 |
| AspS9I | GGNCC | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 3 cut(s) | 13, 223, 257 |
| AsuNHI | GCTAGC | 1 cut(s) | 26 |
| BbsI | GAAGAC | 1 cut(s) | 102 |
| Bbv12I | GWGCWC | 1 cut(s) | 70 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BccI | CCATC | 1 cut(s) | 190 |
| BfaI | CTAG | 2 cut(s) | 27, 270 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 173 |
| BisI | GCNGC | 2 cut(s) | 36, 165 |
| BlsI | GCNGC | 2 cut(s) | 37, 166 |
| BmgT120I | GGNCC | 1 cut(s) | 95 |
| BmtI | GCTAGC | 1 cut(s) | 30 |
| BpiI | GAAGAC | 1 cut(s) | 102 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 73, 84, 103, 114 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 77 |
| BseGI | GGATG | 2 cut(s) | 201, 205 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 77 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BshFI | GGCC | 4 cut(s) | 5, 96, 151, 167 |
| BsiHKAI | GWGCWC | 1 cut(s) | 70 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 77 |
| BsnI | GGCC | 4 cut(s) | 5, 96, 151, 167 |
| Bsp1286I | GDGCHC | 1 cut(s) | 70 |
| Bsp143I | GATC | 1 cut(s) | 73 |
| BspACI | CCGC | 2 cut(s) | 24, 164 |
| BspANI | GGCC | 4 cut(s) | 5, 96, 151, 167 |
| BspOI | GCTAGC | 1 cut(s) | 30 |
| BssMI | GATC | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 3 cut(s) | 28, 51, 236 |
| BstF5I | GGATG | 2 cut(s) | 201, 205 |
| BstHHI | GCGC | 1 cut(s) | 49 |
| BstKTI | GATC | 1 cut(s) | 76 |
| BstMBI | GATC | 1 cut(s) | 73 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 32, 44, 173, 286 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 1 cut(s) | 102 |
| BsuRI | GGCC | 4 cut(s) | 5, 96, 151, 167 |
| BtsCI | GGATG | 2 cut(s) | 201, 205 |
| Cac8I | GCNNGC | 3 cut(s) | 28, 51, 236 |
| CfoI | GCGC | 1 cut(s) | 49 |
| Cfr13I | GGNCC | 1 cut(s) | 95 |
| CviJI | RGCY | 9 cut(s) | 5, 30, 96, 136, 151, 167, 176, 238, 280 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 30, 96, 136, 151, 167, 176, 238, 280 |
| DpnI | GATC | 1 cut(s) | 75 |
| DpnII | GATC | 1 cut(s) | 73 |
| EcoO109I | RGGNCCY | 1 cut(s) | 95 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 164, 196 |
| Fnu4HI | GCNGC | 2 cut(s) | 36, 165 |
| FokI | GGATG | 2 cut(s) | 208, 212 |
| Fsp4HI | GCNGC | 2 cut(s) | 36, 165 |
| FspBI | CTAG | 2 cut(s) | 27, 270 |
| GlaI | GCGC | 1 cut(s) | 48 |
| GluI | GCNGC | 2 cut(s) | 36, 165 |
| HaeIII | GGCC | 4 cut(s) | 5, 96, 151, 167 |
| HhaI | GCGC | 1 cut(s) | 49 |
| Hin6I | GCGC | 1 cut(s) | 47 |
| HinP1I | GCGC | 1 cut(s) | 47 |
| HincII | GTYRAC | 1 cut(s) | 157 |
| HindII | GTYRAC | 1 cut(s) | 157 |
| HinfI | GANTC | 1 cut(s) | 259 |
| HphI | GGTGA | 3 cut(s) | 13, 223, 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 1 cut(s) | 126 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 193 |
| Hpy8I | GTNNAC | 1 cut(s) | 157 |
| Hpy99I | CGWCG | 2 cut(s) | 108, 150 |
| HpyAV | CCTTC | 2 cut(s) | 178, 194 |
| HpyCH4V | TGCA | 1 cut(s) | 53 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 32, 44, 173, 286 |
| HspAI | GCGC | 1 cut(s) | 47 |
| Kzo9I | GATC | 1 cut(s) | 73 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| LpnPI | CCDG | 7 cut(s) | 62, 84, 111, 165, 174, 178, 194 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| MaeI | CTAG | 2 cut(s) | 27, 270 |
| MaeIII | GTNAC | 1 cut(s) | 202 |
| MalI | GATC | 1 cut(s) | 75 |
| MboI | GATC | 1 cut(s) | 73 |
| MboII | GAAGA | 2 cut(s) | 102, 235 |
| MhlI | GDGCHC | 1 cut(s) | 70 |
| MluCI | AATT | 1 cut(s) | 84 |
| MnlI | CCTC | 6 cut(s) | 16, 49, 49, 53, 86, 147 |
| MseI | TTAA | 1 cut(s) | 218 |
| MslI | CAYNNNNRTG | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 32, 44, 173, 286 |
| NdeII | GATC | 1 cut(s) | 73 |
| NheI | GCTAGC | 1 cut(s) | 26 |
| NmuCI | GTSAC | 1 cut(s) | 202 |
| OliI | CACNNNNGTG | 1 cut(s) | 209 |
| PfeI | GAWTC | 1 cut(s) | 259 |
| PkrI | GCNGC | 2 cut(s) | 37, 166 |
| PspPI | GGNCC | 1 cut(s) | 95 |
| RseI | CAYNNNNRTG | 1 cut(s) | 209 |
| SaqAI | TTAA | 1 cut(s) | 218 |
| SatI | GCNGC | 2 cut(s) | 36, 165 |
| Sau3AI | GATC | 1 cut(s) | 73 |
| Sau96I | GGNCC | 1 cut(s) | 95 |
| SduI | GDGCHC | 1 cut(s) | 70 |
| SetI | ASST | 3 cut(s) | 32, 64, 240 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 209 |
| Sse9I | AATT | 1 cut(s) | 84 |
| SsiI | CCGC | 2 cut(s) | 24, 164 |
| SspMI | CTAG | 2 cut(s) | 27, 270 |
| TaqII | GACCGA | 1 cut(s) | 96 |
| TasI | AATT | 1 cut(s) | 84 |
| TauI | GCSGC | 1 cut(s) | 167 |
| TfiI | GAWTC | 1 cut(s) | 259 |
| Tru1I | TTAA | 1 cut(s) | 218 |
| Tru9I | TTAA | 1 cut(s) | 218 |
| TseFI | GTSAC | 1 cut(s) | 202 |
| TseI | GCWGC | 1 cut(s) | 35 |
| Tsp45I | GTSAC | 1 cut(s) | 202 |
| XspI | CTAG | 2 cut(s) | 27, 270 |