Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003099

Physical Location & Seq

Genomic Coordinates Forward (+)

15123657 .. 15125950

Gene Structure 2294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G132500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGCTTGTGACAAGGGATTTTCTTGCACCTACATGCTCTTGGAACCCAAAGATGTGGGTTTCTTTGATCTGATTCACATCTTGTTTTCCAACAACTTAGGGAGAAGGAGGTTTGTCGATTCTTCTGAGGAGACTGAGGATGACTTTGAGCGCAGATGGCTCATATTTCTCTCTATTGTCGTGCAAAAGTTGCTTCAGTTTGTGGCAAAGCCAATGGCAACTATTGGATGGGGGATCGAAATGTGCTTGAATCTTATCTCAAGTAATCAAAGCTTGGTCGGGCTGATCCTAAATTTTCTGCGAGGTAAGGTTATAATACCAGATAAAGACTCAAGAACATTCTTGTCGTTTATTGGGAATTTGGACAAGCGAGTAGAGCTAGACAAAAGCATCAAACATGGAGATGGCAGGTACAATGCAGCACTTAGTATGATGGCGTCTAAAATATCATATGAGAACGCATTCTACATCCGAACTACGGTCGACCAACACTGGAAGATGGAGTTCTTGGGCTCTTACGACTTCTGGAATGATTATCAAGGAAAAGCTACAACACAAGCCTTTATGCTTCGTGACAAAAGTGATGACCATGACACTATTGTTGTGGCCTTTAGAGGCACCGAACCGTTTGATGCGGATGCATGGTGCTCTGACTTTGACATCTCTTGGTATCAACTCAAAGGGGTTGGAAGGATCCATGGCGGCTTCATGAAATCTCTAGGTTTACAAAAGAATGTTGGTTGGCCTGAGCCAGAGGAAGTCAAACAAGATGATAGCCGCCCAGCCTTAGCTTACTATGCCATTAGGGATATGCTAGAGAAACTCCTGCTTGAAAATGACAAAGCAAGATTTATAATAACTGGGCACAGTTTAGGTGGGGCTCTAGCAATTCTCTTTCCGGCACTCTTAACATTTCACAAGGGAAGAGATTCAGATTTGCTGCTGGAGAGGTTGGAGGGAGTTTACACATTTGGGCAACCTAGAGTTGGAGATAAGGATTTTGGGCAATACATGGAAAAGAAAATGATAGAGCATAAGATTAAGTATTTTAGGTTTGTTTATGGTAATGACATGGTGCCAAGGCTGCCTTATGATGACAAGGCTCTAATGTTCAAGCACTTTGGGACTTGCCTCTACTATAATAGGAAATATGAAGTTCAGGTTGTTCCAGAGGAGCCAAACAAGAACTACTTCTCGCCAAAAAGGACAATTCCCATGATGATAAATGCTTTTGGAGAGTTGATAAGAAGTTTCACCATTCCAGATAAGTTGGGACCAAACTACAAAGAAGGGCTCTTATTCAAAATGTTTAGGCTAATAGGTTTGGTCATGCCAGGCGCATCAGCACATTGTCCCCAAGATTATGTAAATTCCACCAGATTGGGATCCTCTCATGTGTTCCTCCCACCCAAGCATTATCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

475

Amino Acids

54.68

Weight (kDa)

7.63

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67050
fragaria_vesca	FvH4_1g16103 FvH4_1g16103 FvH4_1g16103 FvH4_1g16104
malus_domestica	MD02G1172900.v1.1 MD02G1173000.v1.1 MD15G1284700.v1.1 MD15G1284800.v1.1
prunus_persica	Prupe.7G132400_v2.0.a1 Prupe.7G132500_v2.0.a1 Prupe.7G132700_v2.0.a1 Prupe.7G132800_v2.0.a1
pyrus_communis	pycom02g13940 pycom15g24750 pycom15g24760
rosa_chinensis	RchiOBHm_Chr2g0105751 RchiOBHm_Chr2g0105761
rosa_laevigata	RLG00000017456 RLG00000017457
rosa_multiflora	Rmu_sc0002741.1_g000020 Rmu_sc0002741.1_g000021
rosa_roxburghii	Rroxscaffold_2G00137920 Rroxscaffold_2G00137930
rosa_rugosa	Rorug02G0130000.1 Rorug02G0130100 Rorug02G0130200
rosa_samantha	Rh2AG181400 Rh2AG181500 Rh2BG190500 Rh2BG190600 Rh2CG185600 Rh2CG185700 Rh2DG187400 Rh2DG187500
rosa_wichuraiana	Rw2G014190 Rw2G014200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	314, 854
Acc36I	ACCTGC	1 cut(s)	399
AccB1I	GGYRCC	2 cut(s)	617, 1075
AccI	GTMKAC	1 cut(s)	483
AciI	CCGC	3 cut(s)	635, 702, 778
AclWI	GGATC	6 cut(s)	242, 280, 688, 701, 1380, 1393
AcsI	RAATTY	3 cut(s)	292, 358, 1369
AcuI	CTGAAG	1 cut(s)	179
AcyI	GRCGYC	1 cut(s)	437
AfaI	GTAC	1 cut(s)	413
AfiI	CCNNNNNNNGG	2 cut(s)	478, 986
AgsI	TTSAA	4 cut(s)	250, 833, 1114, 1303
AjnI	CCWGG	1 cut(s)	1333
AluBI	AGCT	4 cut(s)	273, 379, 548, 791
AluI	AGCT	4 cut(s)	273, 379, 548, 791
Alw21I	GWGCWC	1 cut(s)	650
Alw26I	GTCTC	1 cut(s)	125
AlwI	GGATC	6 cut(s)	242, 280, 688, 701, 1380, 1393
AoxI	GGCC	2 cut(s)	606, 743
ApeKI	GCWGC	3 cut(s)	419, 940, 1084
ApoI	RAATTY	3 cut(s)	292, 358, 1369
Asp700I	GAANNNNTTC	3 cut(s)	461, 928, 1190
AspLEI	GCGC	2 cut(s)	153, 1340
AspS9I	GGNCC	1 cut(s)	1274
AsuHPI	GGTGA	1 cut(s)	1246
AvaII	GGWCC	1 cut(s)	1274
BaeGI	GKGCMC	1 cut(s)	867
BamHI	GGATCC	2 cut(s)	693, 1385
BanI	GGYRCC	2 cut(s)	617, 1075
BanII	GRGCYC	3 cut(s)	515, 883, 1296
Bbv12I	GWGCWC	1 cut(s)	650
BbvI	GCAGC	3 cut(s)	431, 927, 1071
BccI	CCATC	5 cut(s)	150, 222, 398, 427, 493
BciT130I	CCWGG	1 cut(s)	1335
BcoDI	GTCTC	1 cut(s)	125
BfaI	CTAG	5 cut(s)	380, 719, 815, 884, 981
BfuAI	ACCTGC	1 cut(s)	399
BisI	GCNGC	5 cut(s)	420, 703, 778, 941, 1085
BlsI	GCNGC	5 cut(s)	421, 704, 779, 942, 1086
Bme1390I	CCNGG	1 cut(s)	1335
Bme18I	GGWCC	1 cut(s)	1274
BmgT120I	GGNCC	1 cut(s)	1274
BmiI	GGNNCC	7 cut(s)	45, 619, 695, 1077, 1176, 1275, 1387
BmrFI	CCNGG	1 cut(s)	1335
BmrI	ACTGGG	1 cut(s)	870
BmsI	GCATC	4 cut(s)	399, 622, 628, 1349
BmuI	ACTGGG	1 cut(s)	870
BpmI	CTGGAG	1 cut(s)	965
Bpu10I	CCTNAGC	2 cut(s)	747, 787
BpuEI	CTTGAG	2 cut(s)	244, 316
BsaBI	GATNNNNATC	2 cut(s)	77, 1384
BsaHI	GRCGYC	1 cut(s)	437
BsaJI	CCNNGG	2 cut(s)	697, 1079
Bsc4I	CCNNNNNNNGG	2 cut(s)	478, 986
Bse1I	ACTGG	2 cut(s)	497, 865
Bse8I	GATNNNNATC	2 cut(s)	77, 1384
BseBI	CCWGG	1 cut(s)	1335
BseDI	CCNNGG	2 cut(s)	697, 1079
BseGI	GGATG	4 cut(s)	145, 233, 468, 643
BseJI	GATNNNNATC	2 cut(s)	77, 1384
BseLI	CCNNNNNNNGG	2 cut(s)	478, 986
BseMII	CTCAG	3 cut(s)	117, 126, 738
BseNI	ACTGG	2 cut(s)	497, 865
BseRI	GAGGAG	2 cut(s)	143, 1187
BseSI	GKGCMC	1 cut(s)	867
BseXI	GCAGC	3 cut(s)	431, 927, 1071
BseYI	CCCAGC	1 cut(s)	781
Bsh1285I	CGRYCG	1 cut(s)	483
BshFI	GGCC	2 cut(s)	608, 745
BshNI	GGYRCC	2 cut(s)	617, 1075
BsiEI	CGRYCG	1 cut(s)	483
BsiHKAI	GWGCWC	1 cut(s)	650
BsiSI	CCGG	1 cut(s)	899
BslFI	GGGAC	3 cut(s)	1138, 1287, 1338
BslI	CCNNNNNNNGG	2 cut(s)	478, 986
BsmAI	GTCTC	1 cut(s)	125
BsmFI	GGGAC	3 cut(s)	1138, 1287, 1338
BsmI	GAATGC	1 cut(s)	461
BsnI	GGCC	2 cut(s)	608, 745
Bsp1286I	GDGCHC	5 cut(s)	515, 650, 867, 883, 1296
Bsp143I	GATC	5 cut(s)	67, 234, 285, 693, 1385
Bsp19I	CCATGG	1 cut(s)	697
BspACI	CCGC	3 cut(s)	635, 702, 778
BspANI	GGCC	2 cut(s)	608, 745
BspCNI	CTCAG	3 cut(s)	118, 127, 739
BspHI	TCATGA	1 cut(s)	708
BspLI	GGNNCC	7 cut(s)	45, 619, 695, 1077, 1176, 1275, 1387
BspMI	ACCTGC	1 cut(s)	399
BspPI	GGATC	6 cut(s)	242, 280, 688, 701, 1380, 1393
BspT107I	GGYRCC	2 cut(s)	617, 1075
BsrI	ACTGG	2 cut(s)	497, 865
BssECI	CCNNGG	2 cut(s)	697, 1079
BssMI	GATC	5 cut(s)	67, 234, 285, 693, 1385
BssNI	GRCGYC	1 cut(s)	437
BssT1I	CCWWGG	2 cut(s)	697, 1079
Bst2UI	CCWGG	1 cut(s)	1335
Bst4CI	ACNGT	3 cut(s)	481, 627, 869
Bst6I	CTCTTC	1 cut(s)	919
BstACI	GRCGYC	1 cut(s)	437
BstAPI	GCANNNNNTGC	1 cut(s)	190
BstDEI	CTNAG	6 cut(s)	97, 126, 135, 425, 747, 787
BstDSI	CCRYGG	1 cut(s)	697
BstF5I	GGATG	4 cut(s)	145, 233, 468, 643
BstHHI	GCGC	2 cut(s)	153, 1340
BstKTI	GATC	5 cut(s)	70, 237, 288, 696, 1388
BstMAI	GTCTC	1 cut(s)	125
BstMBI	GATC	5 cut(s)	67, 234, 285, 693, 1385
BstMCI	CGRYCG	1 cut(s)	483
BstMWI	GCNNNNNNNGC	5 cut(s)	157, 190, 376, 797, 1084
BstNI	CCWGG	1 cut(s)	1335
BstNSI	RCATGY	1 cut(s)	37
BstSCI	CCNGG	1 cut(s)	1333
BstSLI	GKGCMC	1 cut(s)	867
BstV1I	GCAGC	3 cut(s)	431, 927, 1071
BstX2I	RGATCY	2 cut(s)	693, 1385
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1381
BstYI	RGATCY	2 cut(s)	693, 1385
BsuRI	GGCC	2 cut(s)	608, 745
BtgI	CCRYGG	1 cut(s)	697
BtsCI	GGATG	4 cut(s)	145, 233, 468, 643
BtsIMutI	CAGTG	1 cut(s)	490
BveI	ACCTGC	1 cut(s)	399
CciI	TCATGA	1 cut(s)	708
CfoI	GCGC	2 cut(s)	153, 1340
Cfr13I	GGNCC	1 cut(s)	1274
CseI	GACGC	1 cut(s)	426
Csp6I	GTAC	1 cut(s)	412
CviQI	GTAC	1 cut(s)	412
DdeI	CTNAG	6 cut(s)	97, 126, 135, 425, 747, 787
DpnI	GATC	5 cut(s)	69, 236, 287, 695, 1387
DpnII	GATC	5 cut(s)	67, 234, 285, 693, 1385
Eam1104I	CTCTTC	1 cut(s)	919
EarI	CTCTTC	1 cut(s)	919
Eco130I	CCWWGG	2 cut(s)	697, 1079
Eco24I	GRGCYC	3 cut(s)	515, 883, 1296
Eco47I	GGWCC	1 cut(s)	1274
Eco57I	CTGAAG	1 cut(s)	179
EcoRII	CCWGG	1 cut(s)	1333
EcoT14I	CCWWGG	2 cut(s)	697, 1079
EcoT22I	ATGCAT	1 cut(s)	643
EcoT38I	GRGCYC	3 cut(s)	515, 883, 1296
ErhI	CCWWGG	2 cut(s)	697, 1079
FalI	AAGNNNNNCTT	4 cut(s)	1072, 1104, 1175, 1207
FaqI	GGGAC	3 cut(s)	1138, 1287, 1338
FauNDI	CATATG	1 cut(s)	451
FblI	GTMKAC	1 cut(s)	483
Fnu4HI	GCNGC	5 cut(s)	420, 703, 778, 941, 1085
FokI	GGATG	4 cut(s)	152, 240, 455, 650
FriOI	GRGCYC	3 cut(s)	515, 883, 1296
Fsp4HI	GCNGC	5 cut(s)	420, 703, 778, 941, 1085
FspBI	CTAG	5 cut(s)	380, 719, 815, 884, 981
GlaI	GCGC	2 cut(s)	152, 1339
GluI	GCNGC	5 cut(s)	420, 703, 778, 941, 1085
GsaI	CCCAGC	1 cut(s)	785
GsuI	CTGGAG	1 cut(s)	965
HaeIII	GGCC	2 cut(s)	608, 745
HapII	CCGG	1 cut(s)	899
HgaI	GACGC	1 cut(s)	426
HhaI	GCGC	2 cut(s)	153, 1340
Hin1I	GRCGYC	1 cut(s)	437
Hin6I	GCGC	2 cut(s)	151, 1338
HinP1I	GCGC	2 cut(s)	151, 1338
HincII	GTYRAC	1 cut(s)	484
HindII	GTYRAC	1 cut(s)	484
HindIII	AAGCTT	1 cut(s)	271
HinfI	GANTC	5 cut(s)	73, 119, 250, 329, 929
HpaII	CCGG	1 cut(s)	899
HphI	GGTGA	1 cut(s)	1246
Hpy166II	GTNNAC	3 cut(s)	484, 725, 964
Hpy188I	TCNGA	5 cut(s)	72, 127, 473, 652, 934
Hpy188III	TCNNGA	6 cut(s)	333, 526, 572, 709, 1169, 1262
Hpy8I	GTNNAC	3 cut(s)	484, 725, 964
HpyAV	CCTTC	3 cut(s)	99, 684, 1283
HpyCH4III	ACNGT	3 cut(s)	481, 627, 869
HpyCH4V	TGCA	4 cut(s)	27, 184, 419, 641
HpyF10VI	GCNNNNNNNGC	5 cut(s)	157, 190, 376, 797, 1084
HpyF3I	CTNAG	6 cut(s)	97, 126, 135, 425, 747, 787
Hsp92I	GRCGYC	1 cut(s)	437
HspAI	GCGC	2 cut(s)	151, 1338
Kzo9I	GATC	5 cut(s)	67, 234, 285, 693, 1385
LmnI	GCTCC	1 cut(s)	1174
Lsp1109I	GCAGC	3 cut(s)	431, 927, 1071
LweI	GCATC	4 cut(s)	399, 622, 628, 1349
MaeI	CTAG	5 cut(s)	380, 719, 815, 884, 981
MaeIII	GTNAC	2 cut(s)	8, 572
MalI	GATC	5 cut(s)	69, 236, 287, 695, 1387
MboI	GATC	5 cut(s)	67, 234, 285, 693, 1385
MboII	GAAGA	3 cut(s)	114, 508, 936
MflI	RGATCY	2 cut(s)	693, 1385
MhlI	GDGCHC	5 cut(s)	515, 650, 867, 883, 1296
MluCI	AATT	5 cut(s)	292, 358, 888, 1209, 1369
MlyI	GAGTC	1 cut(s)	323
MmeI	TCCRAC	4 cut(s)	114, 667, 933, 967
Mph1103I	ATGCAT	1 cut(s)	643
MroXI	GAANNNNTTC	3 cut(s)	461, 928, 1190
MseI	TTAA	2 cut(s)	908, 1041
MslI	CAYNNNNRTG	2 cut(s)	32, 402
MspI	CCGG	1 cut(s)	899
MspR9I	CCNGG	1 cut(s)	1335
Mva1269I	GAATGC	1 cut(s)	461
MvaI	CCWGG	1 cut(s)	1335
MwoI	GCNNNNNNNGC	5 cut(s)	157, 190, 376, 797, 1084
NcoI	CCATGG	1 cut(s)	697
NdeI	CATATG	1 cut(s)	451
NdeII	GATC	5 cut(s)	67, 234, 285, 693, 1385
NlaIV	GGNNCC	7 cut(s)	45, 619, 695, 1077, 1176, 1275, 1387
NmuCI	GTSAC	2 cut(s)	8, 572
NsiI	ATGCAT	1 cut(s)	643
NspI	RCATGY	1 cut(s)	37
PagI	TCATGA	1 cut(s)	708
PctI	GAATGC	1 cut(s)	461
PdmI	GAANNNNTTC	3 cut(s)	461, 928, 1190
PfeI	GAWTC	4 cut(s)	73, 119, 250, 929
PkrI	GCNGC	5 cut(s)	421, 704, 779, 942, 1086
PleI	GAGTC	1 cut(s)	323
PpsI	GAGTC	1 cut(s)	323
PsiI	TTATAA	2 cut(s)	314, 854
Psp6I	CCWGG	1 cut(s)	1333
PspFI	CCCAGC	1 cut(s)	781
PspGI	CCWGG	1 cut(s)	1333
PspN4I	GGNNCC	7 cut(s)	45, 619, 695, 1077, 1176, 1275, 1387
PspPI	GGNCC	1 cut(s)	1274
PsrI	GAACNNNNNNTAC	2 cut(s)	449, 481
PsuI	RGATCY	2 cut(s)	693, 1385
RsaI	GTAC	1 cut(s)	413
RsaNI	GTAC	1 cut(s)	412
RseI	CAYNNNNRTG	2 cut(s)	32, 402
SalI	GTCGAC	1 cut(s)	482
SaqAI	TTAA	2 cut(s)	908, 1041
SatI	GCNGC	5 cut(s)	420, 703, 778, 941, 1085
Sau3AI	GATC	5 cut(s)	67, 234, 285, 693, 1385
Sau96I	GGNCC	1 cut(s)	1274
SchI	GAGTC	1 cut(s)	323
ScrFI	CCNGG	1 cut(s)	1335
SduI	GDGCHC	5 cut(s)	515, 650, 867, 883, 1296
SfaNI	GCATC	4 cut(s)	399, 622, 628, 1349
SinI	GGWCC	1 cut(s)	1274
SmiMI	CAYNNNNRTG	2 cut(s)	32, 402
SmlI	CTYRAG	2 cut(s)	259, 331
SmoI	CTYRAG	2 cut(s)	259, 331
Sse9I	AATT	5 cut(s)	292, 358, 888, 1209, 1369
SsiI	CCGC	3 cut(s)	635, 702, 778
SspMI	CTAG	5 cut(s)	380, 719, 815, 884, 981
StyD4I	CCNGG	1 cut(s)	1333
StyI	CCWWGG	2 cut(s)	697, 1079
TaaI	ACNGT	3 cut(s)	481, 627, 869
TaqI	TCGA	3 cut(s)	117, 237, 483
TasI	AATT	5 cut(s)	292, 358, 888, 1209, 1369
TauI	GCSGC	2 cut(s)	705, 780
TfiI	GAWTC	4 cut(s)	73, 119, 250, 929
Tru1I	TTAA	2 cut(s)	908, 1041
Tru9I	TTAA	2 cut(s)	908, 1041
TscAI	CASTG	1 cut(s)	497
TseFI	GTSAC	2 cut(s)	8, 572
TseI	GCWGC	3 cut(s)	419, 940, 1084
Tsp45I	GTSAC	2 cut(s)	8, 572
TspDTI	ATGAA	3 cut(s)	697, 725, 1167
TspRI	CASTG	1 cut(s)	497
VpaK11BI	GGWCC	1 cut(s)	1274
XapI	RAATTY	3 cut(s)	292, 358, 1369
XceI	RCATGY	1 cut(s)	37
XmiI	GTMKAC	1 cut(s)	483
XmnI	GAANNNNTTC	3 cut(s)	461, 928, 1190
XspI	CTAG	5 cut(s)	380, 719, 815, 884, 981
Zsp2I	ATGCAT	1 cut(s)	643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.