Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003099

Physical Location & Seq

Genomic Coordinates Forward (+)

15140559 .. 15143462

Gene Structure 2904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G132800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCCTGTAACAAGAGCTTTTCCAGCAATTATTTTCTGTTGACGCCAGAAGAAGTTGGCTTCTTTGATCTGATTCACATTTTGTTCTCCACCACCAAGTTTAAGGAAGGAAATAAGTTTTTAGATATGTCTAAGGTAGAGGAGATCAACTTCAGGCGCAGATGGTTTATATTTCTGTCCATTTTGGGTCAAAAATTTATGCAGTTTGTGTCAAAGCCACTCTCAGAGCTGGGGTCGGGGATCGAAGTGGCTTTGAACCTTATAGCAAGCAACCGCAATGTGTTTGTGCTCATGCTCAATTTCCTCCGAGGGAGGGCGGTAAAGCCAGATAAAACATCGGCAACATTTCTGTCATTTATAGGGATTATAGACAAGCGGGTGGAGTTGGACAGTAGCATCAAACATGATGATGCCAACTACCATGCAGCACTCTCTGCGATGGCTTCTAAAGCATCATATGAAAACAGTGCATGCATTGAAACTATTGTCAAGAATCACTGGAAGATGGAGTTCTTGGGATTTTATGACTTCTGGAATGATTATCAGGGAAAAGCCACGACACAAGCCTTCTTGCTTCGTGACAAAACTTGTGACCAAGACACAATTGTTGTGGCCTTTAGAGGAACTGAACCCTTTGATGCAGATGCATGGTGCTCTGACTTTGACTTCTCCTGGTATGAGCTTTACGGGGTTGGCAAAATTCATGGTGGCTTCATGAAAGCTTTAGGGTTACACAAGAATGATGGTTGGCCTAAGGAAGAAGTCAAACAAGATGGTAATCCACCCCGACCCCGAGCTTACTATGCCATTAGGGACATGCTAAATAAACTTTTGAAGCAAAATGATGAATCAAGATACATAGTGACAGGCCATAGTCTCGGTGGGGCTCTAGCAATTCTGTTTCCAGCGATTTTGGCTATGCATGATGAGGCATGGTTATTGGAGAGATTGAAGGGGGTATATACATTTGGGCAGCCAAGGGTAGGAGATGAGAAATTTGGAGAGTTCATGGAAAAACAATTGAAAGAGCGTCGCGTTCCATATTTTAGAATTGTTTATGGTAATGATATGGTGCCTAGGTTGCCTTTTGATGACAATGCCTTGATGTACAAGCACTTTGGGACATGCCTCTACTATAATAGGCACTATGAAGTGAAGATTGTTGAAGAAGAACCATATAGGAATTACTTCTCACCATTGGGCGCAATACCCAAGATGATAAATGCTTTCTGGGAGCTGTTTAGAAGCTTCACTATTTCATACACCAAGGGATCAGGCTACAAAGAAGGGTGGCTTCTAATTATTTTTAGGATAATTGGTTTGGTACTTCCAGGCGCCCCAGCTCATAGCACCCAAGATTATGTTAATGCCACCCGTTTGGGATCATCGGACGTCTTCGTCCCACCTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005615 GO:0044421

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

471

Amino Acids

54.1

Weight (kDa)

8.07

Isoelectric Point (pI)

43.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67050
fragaria_vesca	FvH4_1g16103 FvH4_1g16103 FvH4_1g16103 FvH4_1g16104
malus_domestica	MD02G1172900.v1.1 MD02G1173000.v1.1 MD15G1284700.v1.1 MD15G1284800.v1.1
prunus_persica	Prupe.7G132400_v2.0.a1 Prupe.7G132500_v2.0.a1 Prupe.7G132700_v2.0.a1 Prupe.7G132800_v2.0.a1
pyrus_communis	pycom02g13940 pycom15g24750 pycom15g24760
rosa_chinensis	RchiOBHm_Chr2g0105751 RchiOBHm_Chr2g0105761
rosa_laevigata	RLG00000017456 RLG00000017457
rosa_multiflora	Rmu_sc0002741.1_g000020 Rmu_sc0002741.1_g000021
rosa_roxburghii	Rroxscaffold_2G00137920 Rroxscaffold_2G00137930
rosa_rugosa	Rorug02G0130000.1 Rorug02G0130100 Rorug02G0130200
rosa_samantha	Rh2AG181400 Rh2AG181500 Rh2BG190500 Rh2BG190600 Rh2CG185600 Rh2CG185700 Rh2DG187400 Rh2DG187500
rosa_wichuraiana	Rw2G014190 Rw2G014200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1397
AatII	GACGTC	1 cut(s)	1395
AccB1I	GGYRCC	2 cut(s)	1072, 1334
AccII	CGCG	1 cut(s)	1035
AciI	CCGC	3 cut(s)	274, 317, 376
AclWI	GGATC	3 cut(s)	248, 1279, 1390
AcsI	RAATTY	3 cut(s)	194, 699, 995
AcuI	CTGAAG	1 cut(s)	136
AcyI	GRCGYC	3 cut(s)	44, 1335, 1392
AfaI	GTAC	2 cut(s)	1109, 1326
AfiI	CCNNNNNNNGG	2 cut(s)	313, 983
AgsI	TTSAA	6 cut(s)	256, 479, 835, 952, 1024, 1166
AjnI	CCWGG	2 cut(s)	671, 1330
AluBI	AGCT	8 cut(s)	18, 229, 682, 722, 797, 1237, 1248, 1343
AluI	AGCT	8 cut(s)	18, 229, 682, 722, 797, 1237, 1248, 1343
Alw21I	GWGCWC	2 cut(s)	291, 656
Alw26I	GTCTC	1 cut(s)	881
AlwI	GGATC	3 cut(s)	248, 1279, 1390
Ama87I	CYCGRG	1 cut(s)	792
AoxI	GGCC	4 cut(s)	3, 612, 749, 868
ApeKI	GCWGC	2 cut(s)	425, 973
ApoI	RAATTY	3 cut(s)	194, 699, 995
Asp700I	GAANNNNTTC	1 cut(s)	1187
AspA2I	CCTAGG	1 cut(s)	1076
AspLEI	GCGC	3 cut(s)	159, 1205, 1337
AsuHPI	GGTGA	1 cut(s)	1185
AvaI	CYCGRG	1 cut(s)	792
AvrII	CCTAGG	1 cut(s)	1076
AxyI	CCTNAGG	1 cut(s)	753
BanI	GGYRCC	2 cut(s)	1072, 1334
BanII	GRGCYC	1 cut(s)	889
BbsI	GAAGAC	1 cut(s)	1387
Bbv12I	GWGCWC	2 cut(s)	291, 656
BbvI	GCAGC	2 cut(s)	437, 985
BccI	CCATC	5 cut(s)	156, 433, 499, 737, 767
BciT130I	CCWGG	2 cut(s)	673, 1332
BcoDI	GTCTC	1 cut(s)	881
BfaI	CTAG	2 cut(s)	890, 1077
BfoI	RGCGCY	1 cut(s)	1338
BisI	GCNGC	2 cut(s)	426, 974
BlnI	CCTAGG	1 cut(s)	1076
BlsI	GCNGC	2 cut(s)	427, 975
Bme1390I	CCNGG	2 cut(s)	673, 1332
BmeT110I	CYCGRG	1 cut(s)	792
BmiI	GGNNCC	2 cut(s)	1074, 1336
BmrFI	CCNGG	2 cut(s)	673, 1332
BmsI	GCATC	5 cut(s)	400, 405, 461, 628, 634
BpiI	GAAGAC	1 cut(s)	1387
BsaBI	GATNNNNATC	1 cut(s)	777
BsaHI	GRCGYC	3 cut(s)	44, 1335, 1392
BsaJI	CCNNGG	4 cut(s)	307, 977, 1076, 1266
Bsc4I	CCNNNNNNNGG	2 cut(s)	313, 983
Bse1I	ACTGG	1 cut(s)	503
Bse21I	CCTNAGG	1 cut(s)	753
Bse3DI	GCAATG	1 cut(s)	283
Bse8I	GATNNNNATC	1 cut(s)	777
BseBI	CCWGG	2 cut(s)	673, 1332
BseDI	CCNNGG	4 cut(s)	307, 977, 1076, 1266
BseJI	GATNNNNATC	1 cut(s)	777
BseLI	CCNNNNNNNGG	2 cut(s)	313, 983
BseMI	GCAATG	1 cut(s)	283
BseMII	CTCAG	1 cut(s)	237
BseNI	ACTGG	1 cut(s)	503
BseRI	GAGGAG	1 cut(s)	155
BseXI	GCAGC	2 cut(s)	437, 985
BseYI	CCCAGC	2 cut(s)	229, 1339
Bsh1236I	CGCG	1 cut(s)	1035
BshFI	GGCC	4 cut(s)	5, 614, 751, 870
BshNI	GGYRCC	2 cut(s)	1072, 1334
BsiHKAI	GWGCWC	2 cut(s)	291, 656
BsiHKCI	CYCGRG	1 cut(s)	792
BslFI	GGGAC	3 cut(s)	827, 1135, 1385
BslI	CCNNNNNNNGG	2 cut(s)	313, 983
BsmAI	GTCTC	1 cut(s)	881
BsmFI	GGGAC	3 cut(s)	827, 1135, 1385
BsnI	GGCC	4 cut(s)	5, 614, 751, 870
BsoBI	CYCGRG	1 cut(s)	792
Bsp1286I	GDGCHC	3 cut(s)	291, 656, 889
Bsp1407I	TGTACA	1 cut(s)	1107
Bsp143I	GATC	5 cut(s)	67, 144, 240, 1271, 1382
BspACI	CCGC	3 cut(s)	274, 317, 376
BspANI	GGCC	4 cut(s)	5, 614, 751, 870
BspCNI	CTCAG	1 cut(s)	236
BspFNI	CGCG	1 cut(s)	1035
BspHI	TCATGA	1 cut(s)	714
BspLI	GGNNCC	2 cut(s)	1074, 1336
BspPI	GGATC	3 cut(s)	248, 1279, 1390
BspT107I	GGYRCC	2 cut(s)	1072, 1334
BsrDI	GCAATG	1 cut(s)	283
BsrGI	TGTACA	1 cut(s)	1107
BsrI	ACTGG	1 cut(s)	503
BssECI	CCNNGG	4 cut(s)	307, 977, 1076, 1266
BssMI	GATC	5 cut(s)	67, 144, 240, 1271, 1382
BssNI	GRCGYC	3 cut(s)	44, 1335, 1392
BssT1I	CCWWGG	3 cut(s)	977, 1076, 1266
Bst2UI	CCWGG	2 cut(s)	673, 1332
Bst4CI	ACNGT	2 cut(s)	392, 467
BstACI	GRCGYC	3 cut(s)	44, 1335, 1392
BstAPI	GCANNNNNTGC	1 cut(s)	434
BstAUI	TGTACA	1 cut(s)	1107
BstC8I	GCNNGC	2 cut(s)	268, 472
BstDEI	CTNAG	3 cut(s)	132, 223, 753
BstFNI	CGCG	1 cut(s)	1035
BstH2I	RGCGCY	1 cut(s)	1338
BstHHI	GCGC	3 cut(s)	159, 1205, 1337
BstKTI	GATC	5 cut(s)	70, 147, 243, 1274, 1385
BstMAI	GTCTC	1 cut(s)	881
BstMBI	GATC	5 cut(s)	67, 144, 240, 1271, 1382
BstMWI	GCNNNNNNNGC	6 cut(s)	24, 434, 449, 803, 914, 1081
BstNI	CCWGG	2 cut(s)	673, 1332
BstNSI	RCATGY	3 cut(s)	474, 820, 1128
BstSCI	CCNGG	2 cut(s)	671, 1330
BstUI	CGCG	1 cut(s)	1035
BstV1I	GCAGC	2 cut(s)	437, 985
BstV2I	GAAGAC	1 cut(s)	1387
BstXI	CCANNNNNNTGG	1 cut(s)	1378
Bsu36I	CCTNAGG	1 cut(s)	753
BsuRI	GGCC	4 cut(s)	5, 614, 751, 870
BtgZI	GCGATG	1 cut(s)	452
BtsIMutI	CAGTG	2 cut(s)	472, 496
Cac8I	GCNNGC	2 cut(s)	268, 472
CciI	TCATGA	1 cut(s)	714
CfoI	GCGC	3 cut(s)	159, 1205, 1337
CseI	GACGC	2 cut(s)	52, 1019
Csp6I	GTAC	2 cut(s)	1108, 1325
CspCI	CAANNNNNGTGG	2 cut(s)	591, 626
CviQI	GTAC	2 cut(s)	1108, 1325
DdeI	CTNAG	3 cut(s)	132, 223, 753
DinI	GGCGCC	1 cut(s)	1336
DpnI	GATC	5 cut(s)	69, 146, 242, 1273, 1384
DpnII	GATC	5 cut(s)	67, 144, 240, 1271, 1382
DrdI	GACNNNNNNGTC	1 cut(s)	1397
DseDI	GACNNNNNNGTC	1 cut(s)	1397
Eco130I	CCWWGG	3 cut(s)	977, 1076, 1266
Eco24I	GRGCYC	1 cut(s)	889
Eco57I	CTGAAG	1 cut(s)	136
Eco81I	CCTNAGG	1 cut(s)	753
Eco88I	CYCGRG	1 cut(s)	792
EcoRII	CCWGG	2 cut(s)	671, 1330
EcoT14I	CCWWGG	3 cut(s)	977, 1076, 1266
EcoT22I	ATGCAT	3 cut(s)	476, 649, 924
EcoT38I	GRGCYC	1 cut(s)	889
EgeI	GGCGCC	1 cut(s)	1336
EheI	GGCGCC	1 cut(s)	1336
ErhI	CCWWGG	3 cut(s)	977, 1076, 1266
FalI	AAGNNNNNCTT	2 cut(s)	1278, 1310
FaqI	GGGAC	3 cut(s)	827, 1135, 1385
FauI	CCCGC	1 cut(s)	369
FauNDI	CATATG	1 cut(s)	457
Fnu4HI	GCNGC	2 cut(s)	426, 974
FriOI	GRGCYC	1 cut(s)	889
Fsp4HI	GCNGC	2 cut(s)	426, 974
FspBI	CTAG	2 cut(s)	890, 1077
GlaI	GCGC	3 cut(s)	158, 1204, 1336
GluI	GCNGC	2 cut(s)	426, 974
GsaI	CCCAGC	2 cut(s)	233, 1343
HaeII	RGCGCY	1 cut(s)	1338
HaeIII	GGCC	4 cut(s)	5, 614, 751, 870
HgaI	GACGC	2 cut(s)	52, 1019
HhaI	GCGC	3 cut(s)	159, 1205, 1337
Hin1I	GRCGYC	3 cut(s)	44, 1335, 1392
Hin6I	GCGC	3 cut(s)	157, 1203, 1335
HinP1I	GCGC	3 cut(s)	157, 1203, 1335
HincII	GTYRAC	1 cut(s)	42
HindII	GTYRAC	1 cut(s)	42
HindIII	AAGCTT	2 cut(s)	720, 1246
HinfI	GANTC	3 cut(s)	73, 493, 848
HphI	GGTGA	1 cut(s)	1185
Hpy166II	GTNNAC	1 cut(s)	42
Hpy188I	TCNGA	5 cut(s)	72, 226, 308, 658, 1390
Hpy188III	TCNNGA	5 cut(s)	490, 532, 578, 715, 852
Hpy8I	GTNNAC	1 cut(s)	42
Hpy99I	CGWCG	1 cut(s)	1035
HpyAV	CCTTC	4 cut(s)	101, 577, 946, 1280
HpyCH4III	ACNGT	2 cut(s)	392, 467
HpyCH4IV	ACGT	1 cut(s)	1392
HpyCH4V	TGCA	7 cut(s)	202, 425, 470, 474, 641, 647, 922
HpyF10VI	GCNNNNNNNGC	6 cut(s)	24, 434, 449, 803, 914, 1081
HpyF3I	CTNAG	3 cut(s)	132, 223, 753
HpySE526I	ACGT	1 cut(s)	1392
Hsp92I	GRCGYC	3 cut(s)	44, 1335, 1392
HspAI	GCGC	3 cut(s)	157, 1203, 1335
KasI	GGCGCC	1 cut(s)	1334
Kzo9I	GATC	5 cut(s)	67, 144, 240, 1271, 1382
LmnI	GCTCC	1 cut(s)	1234
Lsp1109I	GCAGC	2 cut(s)	437, 985
LweI	GCATC	5 cut(s)	400, 405, 461, 628, 634
MaeI	CTAG	2 cut(s)	890, 1077
MaeII	ACGT	1 cut(s)	1392
MaeIII	GTNAC	5 cut(s)	8, 578, 590, 729, 862
MalI	GATC	5 cut(s)	69, 146, 242, 1273, 1384
MboI	GATC	5 cut(s)	67, 144, 240, 1271, 1382
MboII	GAAGA	7 cut(s)	62, 514, 770, 1168, 1178, 1181, 1387
MfeI	CAATTG	2 cut(s)	603, 1019
MhlI	GDGCHC	3 cut(s)	291, 656, 889
Mly113I	GGCGCC	1 cut(s)	1335
MmeI	TCCRAC	1 cut(s)	366
MnlI	CCTC	7 cut(s)	133, 302, 306, 314, 614, 922, 1139
Mph1103I	ATGCAT	3 cut(s)	476, 649, 924
MroXI	GAANNNNTTC	1 cut(s)	1187
MseI	TTAA	2 cut(s)	102, 1365
MslI	CAYNNNNRTG	3 cut(s)	408, 738, 1408
MspR9I	CCNGG	2 cut(s)	673, 1332
MunI	CAATTG	2 cut(s)	603, 1019
MvaI	CCWGG	2 cut(s)	673, 1332
MvnI	CGCG	1 cut(s)	1035
MwoI	GCNNNNNNNGC	6 cut(s)	24, 434, 449, 803, 914, 1081
NarI	GGCGCC	1 cut(s)	1335
NdeI	CATATG	1 cut(s)	457
NdeII	GATC	5 cut(s)	67, 144, 240, 1271, 1382
NlaIV	GGNNCC	2 cut(s)	1074, 1336
NmuCI	GTSAC	3 cut(s)	578, 590, 862
NsiI	ATGCAT	3 cut(s)	476, 649, 924
NspI	RCATGY	3 cut(s)	474, 820, 1128
PaeI	GCATGC	1 cut(s)	474
PagI	TCATGA	1 cut(s)	714
PdmI	GAANNNNTTC	1 cut(s)	1187
PfeI	GAWTC	3 cut(s)	73, 493, 848
PkrI	GCNGC	2 cut(s)	427, 975
PluTI	GGCGCC	1 cut(s)	1338
Psp6I	CCWGG	2 cut(s)	671, 1330
PspFI	CCCAGC	2 cut(s)	229, 1339
PspGI	CCWGG	2 cut(s)	671, 1330
PspN4I	GGNNCC	2 cut(s)	1074, 1336
RsaI	GTAC	2 cut(s)	1109, 1326
RsaNI	GTAC	2 cut(s)	1108, 1325
RseI	CAYNNNNRTG	3 cut(s)	408, 738, 1408
SaqAI	TTAA	2 cut(s)	102, 1365
SatI	GCNGC	2 cut(s)	426, 974
Sau3AI	GATC	5 cut(s)	67, 144, 240, 1271, 1382
ScrFI	CCNGG	2 cut(s)	673, 1332
SduI	GDGCHC	3 cut(s)	291, 656, 889
SfaNI	GCATC	5 cut(s)	400, 405, 461, 628, 634
SfoI	GGCGCC	1 cut(s)	1336
SmiMI	CAYNNNNRTG	3 cut(s)	408, 738, 1408
SphI	GCATGC	1 cut(s)	474
SsiI	CCGC	3 cut(s)	274, 317, 376
SspDI	GGCGCC	1 cut(s)	1334
SspMI	CTAG	2 cut(s)	890, 1077
StyD4I	CCNGG	2 cut(s)	671, 1330
StyI	CCWWGG	3 cut(s)	977, 1076, 1266
TaaI	ACNGT	2 cut(s)	392, 467
TaiI	ACGT	1 cut(s)	1395
TaqI	TCGA	1 cut(s)	243
TatI	WGTACW	1 cut(s)	1107
TfiI	GAWTC	3 cut(s)	73, 493, 848
Tru1I	TTAA	2 cut(s)	102, 1365
Tru9I	TTAA	2 cut(s)	102, 1365
TscAI	CASTG	2 cut(s)	472, 503
TseFI	GTSAC	3 cut(s)	578, 590, 862
TseI	GCWGC	2 cut(s)	425, 973
Tsp45I	GTSAC	3 cut(s)	578, 590, 862
TspDTI	ATGAA	8 cut(s)	474, 692, 703, 731, 861, 997, 1164, 1248
TspRI	CASTG	2 cut(s)	472, 503
XapI	RAATTY	3 cut(s)	194, 699, 995
XceI	RCATGY	3 cut(s)	474, 820, 1128
XcmI	CCANNNNNNNNNTGG	1 cut(s)	878
XmaJI	CCTAGG	1 cut(s)	1076
XmnI	GAANNNNTTC	1 cut(s)	1187
XspI	CTAG	2 cut(s)	890, 1077
ZraI	GACGTC	1 cut(s)	1393
Zsp2I	ATGCAT	3 cut(s)	476, 649, 924

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.