Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007293

Physical Location & Seq

Genomic Coordinates Reverse (-)

15392404 .. 15400181

Gene Structure 7778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G136800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 723 bp

ATGGCAACGTCATCAGTGCCCGAGTCGTCCATGGCGGAGTTCGATTCCAGCAGTGTTGGCTCGGATTACGCGGAGATCATAGTACTGCGTCACGGTGAAACGGCCTGGAACGCTGATAGAAGAATCCAGGGGCAACTGGATGTTGAATTAAATGATGCTGGGAGGCAGCAAGCAGCTCTATTGGGTGATAGGTTATCCAAGGAGCCCAAGATCTCCCTTGTATATTCTTCTGACTTAGCAAGAGCTTATGAAACTGCGCAGATAATTGCAGCCAGGTGCGGCGGGCTAAAGGTTGTAACAGATGTTGATTTACGAGAAAGGCATTTAGGGGATCTTCAAGGCCTTGTATTTGGCGACACTGCCAAACTTAATCCTAAGGCTCACCAGGCCTTTGTATCTCATGAGACATGCCAAGAGATTCCAGGTGGTGGAGAAAGTCGCGATCAACTTCATCAACGTTGCACGTCATCATTGCAGAGAATTGGCAATAAGCACAAAGGAGAGCGAGTAGTTCTGGTCAGTCATGGAGGGTTTATCAGAACACTCTACAAACAGGCTTCCCCGGATGGCAGGTCTGTTGAAAAAGTACTCAATACATCCGTCAACATAATTCACGTGTATGATGACGGCAAATGGACCATAAAATCCTGGGGTGATGTTAGTCACCTCAACCCAACAGGTTATCTGCAATCGGGTTTCGGCGGGGATGAAAAATCTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00260 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00260 map00680 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

His_Phos_1

Protein Analysis

241

Amino Acids

26.14

Weight (kDa)

6.14

Isoelectric Point (pI)

40.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50520
fragaria_vesca	FvH4_1g15610 FvH4_1g15610 FvH4_1g15610 FvH4_1g15610
malus_domestica	MD02G1168200.v1.1 MD15G1280300.v1.1 MD15G1280400.v1.1 MD15G1280500.v1.1
prunus_persica	Prupe.7G136800_v2.0.a1 Prupe.7G136800_v2.0.a1 Prupe.7G136900_v2.0.a1
pyrus_communis	pycom15g24320 pycom15g24330
rosa_chinensis	RchiOBHm_Chr2g0104951
rosa_laevigata	RLG00000017378
rosa_multiflora	Rmu_sc0001247.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138630
rosa_rugosa	Rorug02G0123900 Rorug02G0124000
rosa_samantha	Rh2AG174800 Rh2BG182600 Rh2CG179300 Rh2DG181200
rosa_wichuraiana	Rw2G013740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	258
Acc36I	ACCTGC	1 cut(s)	561
AccB7I	CCANNNNNTGG	1 cut(s)	428
AccII	CGCG	2 cut(s)	71, 441
AciI	CCGC	5 cut(s)	35, 71, 279, 282, 702
AclI	AACGTT	1 cut(s)	457
AclWI	GGATC	1 cut(s)	339
AcvI	CACGTG	1 cut(s)	616
AfaI	GTAC	2 cut(s)	84, 588
AfiI	CCNNNNNNNGG	1 cut(s)	428
AflIII	ACRYGT	1 cut(s)	615
AgsI	TTSAA	3 cut(s)	146, 338, 581
AjiI	CACGTC	1 cut(s)	465
AjnI	CCWGG	6 cut(s)	104, 126, 272, 384, 421, 647
AluBI	AGCT	2 cut(s)	176, 245
AluI	AGCT	2 cut(s)	176, 245
Alw26I	GTCTC	1 cut(s)	398
AlwI	GGATC	1 cut(s)	339
Ama87I	CYCGRG	1 cut(s)	20
AoxI	GGCC	3 cut(s)	102, 340, 387
ApeKI	GCWGC	3 cut(s)	166, 173, 269
AspLEI	GCGC	1 cut(s)	259
AspS9I	GGNCC	1 cut(s)	636
AsuC2I	CCSGG	1 cut(s)	563
AsuHPI	GGTGA	5 cut(s)	107, 197, 374, 656, 665
AvaI	CYCGRG	1 cut(s)	20
AvaII	GGWCC	1 cut(s)	636
AxyI	CCTNAGG	1 cut(s)	375
BaeGI	GKGCMC	1 cut(s)	21
BanII	GRGCYC	1 cut(s)	207
BbrPI	CACGTG	1 cut(s)	616
BbvI	GCAGC	3 cut(s)	178, 185, 281
BccI	CCATC	1 cut(s)	560
BceAI	ACGGC	2 cut(s)	117, 643
BciT130I	CCWGG	6 cut(s)	106, 128, 274, 386, 423, 649
BcnI	CCSGG	1 cut(s)	563
BcoDI	GTCTC	1 cut(s)	398
BfuAI	ACCTGC	1 cut(s)	561
BglII	AGATCT	1 cut(s)	210
BisI	GCNGC	4 cut(s)	167, 174, 270, 280
BlsI	GCNGC	4 cut(s)	168, 175, 271, 281
BmcAI	AGTACT	2 cut(s)	84, 588
Bme1390I	CCNGG	7 cut(s)	106, 128, 274, 386, 423, 563, 649
Bme18I	GGWCC	1 cut(s)	636
BmeT110I	CYCGRG	1 cut(s)	20
BmgBI	CACGTC	1 cut(s)	465
BmgT120I	GGNCC	1 cut(s)	636
BmiI	GGNNCC	1 cut(s)	204
BmrFI	CCNGG	7 cut(s)	106, 128, 274, 386, 423, 563, 649
BmsI	GCATC	1 cut(s)	145
BpuMI	CCSGG	1 cut(s)	563
BsaAI	YACGTR	1 cut(s)	616
BsaJI	CCNNGG	5 cut(s)	30, 127, 198, 561, 648
BsaXI	ACNNNNNCTCC	2 cut(s)	492, 522
Bsc4I	CCNNNNNNNGG	1 cut(s)	428
Bse1I	ACTGG	1 cut(s)	141
Bse21I	CCTNAGG	1 cut(s)	375
Bse3DI	GCAATG	1 cut(s)	470
BseBI	CCWGG	6 cut(s)	106, 128, 274, 386, 423, 649
BseDI	CCNNGG	5 cut(s)	30, 127, 198, 561, 648
BseGI	GGATG	4 cut(s)	145, 571, 596, 712
BseLI	CCNNNNNNNGG	1 cut(s)	428
BseMI	GCAATG	1 cut(s)	470
BseNI	ACTGG	1 cut(s)	141
BseSI	GKGCMC	1 cut(s)	21
BseXI	GCAGC	3 cut(s)	178, 185, 281
BseYI	CCCAGC	1 cut(s)	158
Bsh1236I	CGCG	2 cut(s)	71, 441
BshFI	GGCC	3 cut(s)	104, 342, 389
BsiHKCI	CYCGRG	1 cut(s)	20
BsiSI	CCGG	1 cut(s)	563
BslI	CCNNNNNNNGG	1 cut(s)	428
BsmAI	GTCTC	1 cut(s)	398
BsnI	GGCC	3 cut(s)	104, 342, 389
BsoBI	CYCGRG	1 cut(s)	20
Bsp1286I	GDGCHC	2 cut(s)	21, 207
Bsp143I	GATC	4 cut(s)	75, 210, 331, 442
Bsp19I	CCATGG	1 cut(s)	30
Bsp68I	TCGCGA	1 cut(s)	441
BspACI	CCGC	5 cut(s)	35, 71, 279, 282, 702
BspANI	GGCC	3 cut(s)	104, 342, 389
BspFNI	CGCG	2 cut(s)	71, 441
BspHI	TCATGA	1 cut(s)	400
BspLI	GGNNCC	1 cut(s)	204
BspMI	ACCTGC	1 cut(s)	561
BspPI	GGATC	1 cut(s)	339
BsrDI	GCAATG	1 cut(s)	470
BsrI	ACTGG	1 cut(s)	141
BssECI	CCNNGG	5 cut(s)	30, 127, 198, 561, 648
BssMI	GATC	4 cut(s)	75, 210, 331, 442
BssT1I	CCWWGG	2 cut(s)	30, 198
Bst2UI	CCWGG	6 cut(s)	106, 128, 274, 386, 423, 649
Bst4CI	ACNGT	1 cut(s)	95
BstBAI	YACGTR	1 cut(s)	616
BstC8I	GCNNGC	2 cut(s)	171, 284
BstDEI	CTNAG	2 cut(s)	235, 375
BstDSI	CCRYGG	1 cut(s)	30
BstF5I	GGATG	4 cut(s)	145, 571, 596, 712
BstFNI	CGCG	2 cut(s)	71, 441
BstHHI	GCGC	1 cut(s)	259
BstKTI	GATC	4 cut(s)	78, 213, 334, 445
BstMAI	GTCTC	1 cut(s)	398
BstMBI	GATC	4 cut(s)	75, 210, 331, 442
BstMWI	GCNNNNNNNGC	3 cut(s)	57, 110, 386
BstNI	CCWGG	6 cut(s)	106, 128, 274, 386, 423, 649
BstNSI	RCATGY	1 cut(s)	411
BstSCI	CCNGG	7 cut(s)	104, 126, 272, 384, 421, 561, 647
BstSLI	GKGCMC	1 cut(s)	21
BstUI	CGCG	2 cut(s)	71, 441
BstV1I	GCAGC	3 cut(s)	178, 185, 281
BstX2I	RGATCY	2 cut(s)	210, 331
BstYI	RGATCY	2 cut(s)	210, 331
Bsu36I	CCTNAGG	1 cut(s)	375
BsuRI	GGCC	3 cut(s)	104, 342, 389
BtgI	CCRYGG	1 cut(s)	30
BtrI	CACGTC	1 cut(s)	465
BtsCI	GGATG	4 cut(s)	145, 571, 596, 712
BtsI	GCAGTG	2 cut(s)	58, 357
BtsIMutI	CAGTG	3 cut(s)	21, 58, 357
BtuMI	TCGCGA	1 cut(s)	441
BveI	ACCTGC	1 cut(s)	561
Cac8I	GCNNGC	2 cut(s)	171, 284
CciI	TCATGA	1 cut(s)	400
CfoI	GCGC	1 cut(s)	259
Cfr13I	GGNCC	1 cut(s)	636
CseI	GACGC	1 cut(s)	77
Csp6I	GTAC	2 cut(s)	83, 587
CviAII	CATG	4 cut(s)	31, 401, 408, 524
CviQI	GTAC	2 cut(s)	83, 587
DdeI	CTNAG	2 cut(s)	235, 375
DpnI	GATC	4 cut(s)	77, 212, 333, 444
DpnII	GATC	4 cut(s)	75, 210, 331, 442
EciI	GGCGGA	1 cut(s)	50
Eco130I	CCWWGG	2 cut(s)	30, 198
Eco147I	AGGCCT	2 cut(s)	342, 389
Eco24I	GRGCYC	1 cut(s)	207
Eco47I	GGWCC	1 cut(s)	636
Eco72I	CACGTG	1 cut(s)	616
Eco81I	CCTNAGG	1 cut(s)	375
Eco88I	CYCGRG	1 cut(s)	20
EcoRII	CCWGG	6 cut(s)	104, 126, 272, 384, 421, 647
EcoT14I	CCWWGG	2 cut(s)	30, 198
EcoT38I	GRGCYC	1 cut(s)	207
ErhI	CCWWGG	2 cut(s)	30, 198
FaeI	CATG	4 cut(s)	34, 404, 411, 527
FatI	CATG	4 cut(s)	30, 400, 407, 523
FauI	CCCGC	2 cut(s)	275, 695
Fnu4HI	GCNGC	4 cut(s)	167, 174, 270, 280
FokI	GGATG	4 cut(s)	152, 578, 583, 719
FriOI	GRGCYC	1 cut(s)	207
Fsp4HI	GCNGC	4 cut(s)	167, 174, 270, 280
FspI	TGCGCA	1 cut(s)	258
GlaI	GCGC	1 cut(s)	258
GluI	GCNGC	4 cut(s)	167, 174, 270, 280
GsaI	CCCAGC	1 cut(s)	162
HaeIII	GGCC	3 cut(s)	104, 342, 389
HapII	CCGG	1 cut(s)	563
HgaI	GACGC	1 cut(s)	77
HhaI	GCGC	1 cut(s)	259
Hin1II	CATG	4 cut(s)	34, 404, 411, 527
Hin6I	GCGC	1 cut(s)	257
HinP1I	GCGC	1 cut(s)	257
HincII	GTYRAC	1 cut(s)	604
HindII	GTYRAC	1 cut(s)	604
HinfI	GANTC	4 cut(s)	23, 44, 123, 418
HpaII	CCGG	1 cut(s)	563
HphI	GGTGA	5 cut(s)	107, 197, 374, 656, 665
Hpy166II	GTNNAC	1 cut(s)	604
Hpy188I	TCNGA	3 cut(s)	64, 232, 539
Hpy188III	TCNNGA	2 cut(s)	401, 440
Hpy8I	GTNNAC	1 cut(s)	604
HpyCH4III	ACNGT	1 cut(s)	95
HpyCH4IV	ACGT	4 cut(s)	8, 457, 464, 615
HpyCH4V	TGCA	4 cut(s)	269, 462, 475, 688
HpyF10VI	GCNNNNNNNGC	3 cut(s)	57, 110, 386
HpyF3I	CTNAG	2 cut(s)	235, 375
HpySE526I	ACGT	4 cut(s)	8, 457, 464, 615
Hsp92II	CATG	4 cut(s)	34, 404, 411, 527
HspAI	GCGC	1 cut(s)	257
Kzo9I	GATC	4 cut(s)	75, 210, 331, 442
LmnI	GCTCC	1 cut(s)	202
Lsp1109I	GCAGC	3 cut(s)	178, 185, 281
LweI	GCATC	1 cut(s)	145
MaeII	ACGT	4 cut(s)	8, 457, 464, 615
MaeIII	GTNAC	3 cut(s)	89, 295, 662
MalI	GATC	4 cut(s)	77, 212, 333, 444
MboI	GATC	4 cut(s)	75, 210, 331, 442
MboII	GAAGA	3 cut(s)	132, 219, 326
MflI	RGATCY	2 cut(s)	210, 331
MhlI	GDGCHC	2 cut(s)	21, 207
MluCI	AATT	4 cut(s)	146, 264, 480, 609
MlyI	GAGTC	1 cut(s)	32
MnlI	CCTC	3 cut(s)	156, 521, 677
MseI	TTAA	2 cut(s)	149, 369
MslI	CAYNNNNRTG	1 cut(s)	618
MspI	CCGG	1 cut(s)	563
MspR9I	CCNGG	7 cut(s)	106, 128, 274, 386, 423, 563, 649
MvaI	CCWGG	6 cut(s)	106, 128, 274, 386, 423, 649
MvnI	CGCG	2 cut(s)	71, 441
MwoI	GCNNNNNNNGC	3 cut(s)	57, 110, 386
NciI	CCSGG	1 cut(s)	563
NcoI	CCATGG	1 cut(s)	30
NdeII	GATC	4 cut(s)	75, 210, 331, 442
NlaIII	CATG	4 cut(s)	34, 404, 411, 527
NlaIV	GGNNCC	1 cut(s)	204
NmuCI	GTSAC	2 cut(s)	89, 662
NruI	TCGCGA	1 cut(s)	441
NsbI	TGCGCA	1 cut(s)	258
NspI	RCATGY	1 cut(s)	411
PagI	TCATGA	1 cut(s)	400
PceI	AGGCCT	2 cut(s)	342, 389
PfeI	GAWTC	3 cut(s)	44, 123, 418
PflMI	CCANNNNNTGG	1 cut(s)	428
PkrI	GCNGC	4 cut(s)	168, 175, 271, 281
PleI	GAGTC	1 cut(s)	31
PmaCI	CACGTG	1 cut(s)	616
PmlI	CACGTG	1 cut(s)	616
PpsI	GAGTC	1 cut(s)	31
Ppu21I	YACGTR	1 cut(s)	616
Psp1406I	AACGTT	1 cut(s)	457
Psp6I	CCWGG	6 cut(s)	104, 126, 272, 384, 421, 647
PspCI	CACGTG	1 cut(s)	616
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	6 cut(s)	104, 126, 272, 384, 421, 647
PspN4I	GGNNCC	1 cut(s)	204
PspPI	GGNCC	1 cut(s)	636
PsuI	RGATCY	2 cut(s)	210, 331
RruI	TCGCGA	1 cut(s)	441
RsaI	GTAC	2 cut(s)	84, 588
RsaNI	GTAC	2 cut(s)	83, 587
RseI	CAYNNNNRTG	1 cut(s)	618
SaqAI	TTAA	2 cut(s)	149, 369
SatI	GCNGC	4 cut(s)	167, 174, 270, 280
Sau3AI	GATC	4 cut(s)	75, 210, 331, 442
Sau96I	GGNCC	1 cut(s)	636
ScaI	AGTACT	2 cut(s)	84, 588
SchI	GAGTC	1 cut(s)	32
ScrFI	CCNGG	7 cut(s)	106, 128, 274, 386, 423, 563, 649
SduI	GDGCHC	2 cut(s)	21, 207
SfaNI	GCATC	1 cut(s)	145
SinI	GGWCC	1 cut(s)	636
SmiMI	CAYNNNNRTG	1 cut(s)	618
Sse9I	AATT	4 cut(s)	146, 264, 480, 609
SseBI	AGGCCT	2 cut(s)	342, 389
SsiI	CCGC	5 cut(s)	35, 71, 279, 282, 702
StuI	AGGCCT	2 cut(s)	342, 389
StyD4I	CCNGG	7 cut(s)	104, 126, 272, 384, 421, 561, 647
StyI	CCWWGG	2 cut(s)	30, 198
TaaI	ACNGT	1 cut(s)	95
TaiI	ACGT	4 cut(s)	11, 460, 467, 618
TaqI	TCGA	1 cut(s)	42
TasI	AATT	4 cut(s)	146, 264, 480, 609
TatI	WGTACW	2 cut(s)	82, 586
TauI	GCSGC	1 cut(s)	282
TfiI	GAWTC	3 cut(s)	44, 123, 418
Tru1I	TTAA	2 cut(s)	149, 369
Tru9I	TTAA	2 cut(s)	149, 369
TscAI	CASTG	3 cut(s)	21, 58, 364
TseFI	GTSAC	2 cut(s)	89, 662
TseI	GCWGC	3 cut(s)	166, 173, 269
Tsp45I	GTSAC	2 cut(s)	89, 662
TspDTI	ATGAA	3 cut(s)	264, 440, 723
TspGWI	ACGGA	1 cut(s)	589
TspRI	CASTG	3 cut(s)	21, 58, 364
Van91I	CCANNNNNTGG	1 cut(s)	428
VpaK11BI	GGWCC	1 cut(s)	636
XceI	RCATGY	1 cut(s)	411
ZrmI	AGTACT	2 cut(s)	84, 588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.