Rmu_sc0001247.1_g000001

phosphoglycerate mutase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001247.1
Physical Location & Seq
Forward (+)
2656 .. 10035
7380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001247.1_g000001.1.cds

Sequence Viewer

Length: 1362 bp
atgacgtcgtcgttctcatttgggccagcccaattgtacattccacctgatcggcctgtaagaaacaacaacaacaacatctcccttcaattcaattccactggattcggattctccaagctcaccacaaatcctctgcttctttccgacttcgctcggaatagcaacggcagagtcaacatggccgattccgactccgattccaggggtgcagattatgcagagatcatggtagtgcgtcatggcgaaacggcctggaacgccgatggtagaatccagggacatctggatgttgaattgaatgatgctgggaggcggcaagcagcggtagtgggcaatagattatccaaggatcctaaaatctctcttgtgtactcgtctgacttgaaacgagcttatgagactgctcaaataatcgcagccaggtgcggtgggttaaatgttgtaacagatcctgatttacgagaaagacacttgggcgatcttcaaggccttgtatttagagaagcggccaaacttagttctaaggcctaccaggcctttacttctcaccgcacatgtcaagatattccaggtggcggagaaagtcttgatcaactttatgaccgctgcacatctgcattggagagaattggtggtaagcacaaaggagagcgagtagttgtggtcactcatgggggtgtcatcagatcactgtaccagcgggcttgcccaaatggcagttccatagggaaagtggccaatacatcgatcaacacatttcacttgtatgatgaggacaaatggaccataaaatcctggggtgatattagtcatctgaaggaaacagattatctggaatcaggtttcggaggggacgcaacttctgtccagacgtcgctcctccggcctcgatcgagcggagacggcccggcgcggcttgccggagggacgccgggggtcgtgcggaggggtatgcgatgtggtggagtcgtcggcgacggttctgcggtgctgcacagaacctgcaactgcagaacgcaccccacgagcgaagaagaaaaggtaaatccggagtttgttcgttctctcccgactgaacactatcggcgatccagccgttgcgttcctgcccgagaggggatgtcgttgctggttagtggcgggtcctcttcacattcggacatggtgttgaagaggacgctgccttctttgcggttgattacgaggttttactggaattttcgggttcatatgttcaaagtagccttggaaatgggcgtctggtggttagagtttgggtcctttggcctgatggtctttgtaaccgcggtttcttggggttttggttcatgtccccccattataaggtttgttgattaa

Protein Analysis

453

Amino Acids

49.77

Weight (kDa)

9.01

Isoelectric Point (pI)

39.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1346
AatII GACGTC 2 cut(s) 8, 878
Acc36I ACCTGC 1 cut(s) 1013
AccBSI CCGCTC 1 cut(s) 900
AccII CGCG 2 cut(s) 916, 1310
AccIII TCCGGA 1 cut(s) 1051
AclWI GGATC 4 cut(s) 347, 360, 446, 1086
AcoI YGGCCR 3 cut(s) 183, 510, 738
AcsI RAATTY 1 cut(s) 1219
AcuI CTGAAG 1 cut(s) 839
AcyI GRCGYC 4 cut(s) 5, 875, 932, 1260
AfaI GTAC 3 cut(s) 38, 374, 698
AfiI CCNNNNNNNGG 4 cut(s) 204, 578, 1119, 1347
AflIII ACRYGT 1 cut(s) 557
AgsI TTSAA 8 cut(s) 89, 94, 296, 301, 388, 488, 1174, 1240
AjnI CCWGG 7 cut(s) 203, 254, 276, 422, 534, 571, 797
AjuI GAANNNNNNNTTGG 4 cut(s) 24, 56, 706, 738
AluBI AGCT 2 cut(s) 121, 395
AluI AGCT 2 cut(s) 121, 395
Alw26I GTCTC 2 cut(s) 395, 897
AlwI GGATC 4 cut(s) 347, 360, 446, 1086
AlwNI CAGNNNCTG 2 cut(s) 455, 1005
Ama87I CYCGRG 1 cut(s) 1113
Aor13HI TCCGGA 1 cut(s) 1051
ApeKI GCWGC 5 cut(s) 323, 419, 609, 994, 1183
ApoI RAATTY 1 cut(s) 1219
AspLEI GCGC 1 cut(s) 916
AspS9I GGNCC 5 cut(s) 23, 786, 908, 1146, 1281
AsuC2I CCSGG 2 cut(s) 911, 936
AsuHPI GGTGA 3 cut(s) 115, 542, 815
AvaI CYCGRG 1 cut(s) 1113
AvaII GGWCC 3 cut(s) 786, 1146, 1281
BalI TGGCCA 1 cut(s) 740
BamHI GGATCC 1 cut(s) 352
BauI CACGAG 1 cut(s) 1027
BbvI GCAGC 5 cut(s) 335, 431, 596, 981, 1170
BccI CCATC 2 cut(s) 260, 1288
BceAI ACGGC 4 cut(s) 184, 267, 922, 1083
BcgI CGANNNNNNTGC 2 cut(s) 968, 1002
BciT130I CCWGG 7 cut(s) 205, 256, 278, 424, 536, 573, 799
BclI TGATCA 1 cut(s) 592
BcnI CCSGG 2 cut(s) 911, 936
BcoDI GTCTC 2 cut(s) 395, 897
BfmI CTRYAG 1 cut(s) 1012
BfuAI ACCTGC 1 cut(s) 1013
BglI GCCNNNNNGGC 2 cut(s) 536, 717
BisI GCNGC 8 cut(s) 317, 324, 420, 510, 610, 917, 995, 1184
BlsI GCNGC 8 cut(s) 318, 325, 421, 511, 611, 918, 996, 1185
Bme1390I CCNGG 9 cut(s) 205, 256, 278, 424, 536, 573, 799, 911, 936
Bme18I GGWCC 3 cut(s) 786, 1146, 1281
BmeT110I CYCGRG 1 cut(s) 1113
BmgT120I GGNCC 5 cut(s) 23, 786, 908, 1146, 1281
BmiI GGNNCC 3 cut(s) 354, 1147, 1282
BmrFI CCNGG 9 cut(s) 205, 256, 278, 424, 536, 573, 799, 911, 936
BmsI GCATC 1 cut(s) 295
BpuMI CCSGG 2 cut(s) 911, 936
Bsa29I ATCGAT 1 cut(s) 749
BsaHI GRCGYC 4 cut(s) 5, 875, 932, 1260
BsaJI CCNNGG 7 cut(s) 204, 277, 348, 798, 935, 1248, 1308
BsaWI WCCGGW 1 cut(s) 1051
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 642, 672
Bsc4I CCNNNNNNNGG 4 cut(s) 204, 578, 1119, 1347
Bse1I ACTGG 2 cut(s) 106, 1220
BseAI TCCGGA 1 cut(s) 1051
BseBI CCWGG 7 cut(s) 205, 256, 278, 424, 536, 573, 799
BseCI ATCGAT 1 cut(s) 749
BseDI CCNNGG 7 cut(s) 204, 277, 348, 798, 935, 1248, 1308
BseGI GGATG 2 cut(s) 295, 1128
BseLI CCNNNNNNNGG 4 cut(s) 204, 578, 1119, 1347
BseNI ACTGG 2 cut(s) 106, 1220
BseRI GAGGAG 1 cut(s) 872
BseXI GCAGC 5 cut(s) 335, 431, 596, 981, 1170
BseYI CCCAGC 1 cut(s) 308
BsgI GTGCAG 3 cut(s) 231, 595, 980
Bsh1236I CGCG 2 cut(s) 916, 1310
Bsh1285I CGRYCG 1 cut(s) 896
BshVI ATCGAT 1 cut(s) 749
BsiEI CGRYCG 1 cut(s) 896
BsiHKCI CYCGRG 1 cut(s) 1113
BsiSI CCGG 5 cut(s) 886, 911, 924, 935, 1052
BslFI GGGAC 4 cut(s) 294, 869, 943, 1320
BslI CCNNNNNNNGG 4 cut(s) 204, 578, 1119, 1347
BsmAI GTCTC 2 cut(s) 395, 897
BsmBI CGTCTC 1 cut(s) 897
BsmFI GGGAC 4 cut(s) 294, 869, 943, 1320
BsoBI CYCGRG 1 cut(s) 1113
Bsp13I TCCGGA 1 cut(s) 1051
Bsp1407I TGTACA 1 cut(s) 36
BspDI ATCGAT 1 cut(s) 749
BspEI TCCGGA 1 cut(s) 1051
BspFNI CGCG 2 cut(s) 916, 1310
BspLI GGNNCC 3 cut(s) 354, 1147, 1282
BspMAI CTGCAG 1 cut(s) 1016
BspMI ACCTGC 1 cut(s) 1013
BspPI GGATC 4 cut(s) 347, 360, 446, 1086
BsrBI CCGCTC 1 cut(s) 900
BsrGI TGTACA 1 cut(s) 36
BsrI ACTGG 2 cut(s) 106, 1220
BssECI CCNNGG 7 cut(s) 204, 277, 348, 798, 935, 1248, 1308
BssNI GRCGYC 4 cut(s) 5, 875, 932, 1260
BssSI CACGAG 1 cut(s) 1027
BssT1I CCWWGG 2 cut(s) 348, 1248
Bst2BI CACGAG 1 cut(s) 1027
Bst2UI CCWGG 7 cut(s) 205, 256, 278, 424, 536, 573, 799
Bst4CI ACNGT 2 cut(s) 696, 983
Bst6I CTCTTC 2 cut(s) 1156, 1169
BstACI GRCGYC 4 cut(s) 5, 875, 932, 1260
BstAPI GCANNNNNTGC 1 cut(s) 218
BstAUI TGTACA 1 cut(s) 36
BstC8I GCNNGC 5 cut(s) 27, 321, 705, 709, 921
BstDEI CTNAG 2 cut(s) 518, 525
BstDSI CCRYGG 1 cut(s) 1308
BstF5I GGATG 2 cut(s) 295, 1128
BstFNI CGCG 2 cut(s) 916, 1310
BstHHI GCGC 1 cut(s) 916
BstMAI GTCTC 2 cut(s) 395, 897
BstMCI CGRYCG 1 cut(s) 896
BstMWI GCNNNNNNNGC 8 cut(s) 218, 260, 536, 717, 886, 906, 920, 1192
BstNI CCWGG 7 cut(s) 205, 256, 278, 424, 536, 573, 799
BstNSI RCATGY 1 cut(s) 561
BstSCI CCNGG 9 cut(s) 203, 254, 276, 422, 534, 571, 797, 909, 934
BstSFI CTRYAG 1 cut(s) 1012
BstUI CGCG 2 cut(s) 916, 1310
BstV1I GCAGC 5 cut(s) 335, 431, 596, 981, 1170
BstX2I RGATCY 2 cut(s) 352, 451
BstYI RGATCY 2 cut(s) 352, 451
Bsu15I ATCGAT 1 cut(s) 749
BsuTUI ATCGAT 1 cut(s) 749
BtgI CCRYGG 1 cut(s) 1308
BtgZI GCGATG 1 cut(s) 973
BtsCI GGATG 2 cut(s) 295, 1128
BtsIMutI CAGTG 2 cut(s) 99, 692
BveI ACCTGC 1 cut(s) 1013
Cac8I GCNNGC 5 cut(s) 27, 321, 705, 709, 921
CaiI CAGNNNCTG 2 cut(s) 455, 1005
CfoI GCGC 1 cut(s) 916
Cfr13I GGNCC 5 cut(s) 23, 786, 908, 1146, 1281
Cfr42I CCGCGG 1 cut(s) 1311
ClaI ATCGAT 1 cut(s) 749
CseI GACGC 5 cut(s) 227, 866, 940, 1189, 1249
Csp6I GTAC 3 cut(s) 37, 373, 697
CviAII CATG 7 cut(s) 181, 229, 242, 558, 674, 1165, 1332
CviQI GTAC 3 cut(s) 37, 373, 697
DdeI CTNAG 2 cut(s) 518, 525
EaeI YGGCCR 3 cut(s) 183, 510, 738
Eam1104I CTCTTC 2 cut(s) 1156, 1169
EarI CTCTTC 2 cut(s) 1156, 1169
EciI GGCGGA 1 cut(s) 594
Eco130I CCWWGG 2 cut(s) 348, 1248
Eco147I AGGCCT 3 cut(s) 492, 530, 539
Eco47I GGWCC 3 cut(s) 786, 1146, 1281
Eco57I CTGAAG 1 cut(s) 839
Eco88I CYCGRG 1 cut(s) 1113
EcoO109I RGGNCCY 2 cut(s) 1146, 1281
EcoRII CCWGG 7 cut(s) 203, 254, 276, 422, 534, 571, 797
EcoT14I CCWWGG 2 cut(s) 348, 1248
ErhI CCWWGG 2 cut(s) 348, 1248
Esp3I CGTCTC 1 cut(s) 897
FaeI CATG 7 cut(s) 184, 232, 245, 561, 677, 1168, 1335
FaqI GGGAC 4 cut(s) 294, 869, 943, 1320
FatI CATG 7 cut(s) 180, 228, 241, 557, 673, 1164, 1331
FauI CCCGC 2 cut(s) 696, 1136
FauNDI CATATG 1 cut(s) 1233
FbaI TGATCA 1 cut(s) 592
Fnu4HI GCNGC 8 cut(s) 317, 324, 420, 510, 610, 917, 995, 1184
FokI GGATG 2 cut(s) 302, 1135
Fsp4HI GCNGC 8 cut(s) 317, 324, 420, 510, 610, 917, 995, 1184
GlaI GCGC 1 cut(s) 915
GluI GCNGC 8 cut(s) 317, 324, 420, 510, 610, 917, 995, 1184
GsaI CCCAGC 1 cut(s) 312
HapII CCGG 5 cut(s) 886, 911, 924, 935, 1052
HgaI GACGC 5 cut(s) 227, 866, 940, 1189, 1249
HhaI GCGC 1 cut(s) 916
Hin1I GRCGYC 4 cut(s) 5, 875, 932, 1260
Hin1II CATG 7 cut(s) 184, 232, 245, 561, 677, 1168, 1335
Hin6I GCGC 1 cut(s) 914
HinP1I GCGC 1 cut(s) 914
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HinfI GANTC 9 cut(s) 105, 111, 174, 188, 194, 200, 273, 839, 969
HpaII CCGG 5 cut(s) 886, 911, 924, 935, 1052
HphI GGTGA 3 cut(s) 115, 542, 815
Hpy166II GTNNAC 2 cut(s) 178, 373
Hpy188III TCNNGA 8 cut(s) 287, 455, 563, 590, 836, 871, 1052, 1072
Hpy8I GTNNAC 2 cut(s) 178, 373
Hpy99I CGWCG 5 cut(s) 10, 13, 880, 977, 983
HpyAV CCTTC 3 cut(s) 95, 814, 1197
HpyCH4III ACNGT 2 cut(s) 696, 983
HpyCH4IV ACGT 2 cut(s) 5, 875
HpyCH4V TGCA 7 cut(s) 212, 221, 612, 620, 997, 1008, 1014
HpyF10VI GCNNNNNNNGC 8 cut(s) 218, 260, 536, 717, 886, 906, 920, 1192
HpyF3I CTNAG 2 cut(s) 518, 525
HpySE526I ACGT 2 cut(s) 5, 875
Hsp92I GRCGYC 4 cut(s) 5, 875, 932, 1260
Hsp92II CATG 7 cut(s) 184, 232, 245, 561, 677, 1168, 1335
HspAI GCGC 1 cut(s) 914
Kpn2I TCCGGA 1 cut(s) 1051
Ksp22I TGATCA 1 cut(s) 592
KspI CCGCGG 1 cut(s) 1311
LmnI GCTCC 1 cut(s) 885
Lsp1109I GCAGC 5 cut(s) 335, 431, 596, 981, 1170
LweI GCATC 1 cut(s) 295
MaeII ACGT 2 cut(s) 5, 875
MaeIII GTNAC 3 cut(s) 445, 667, 1303
MbiI CCGCTC 1 cut(s) 900
MboII GAAGA 5 cut(s) 476, 1046, 1049, 1143, 1186
MfeI CAATTG 1 cut(s) 32
MflI RGATCY 2 cut(s) 352, 451
MlsI TGGCCA 1 cut(s) 740
MluCI AATT 6 cut(s) 32, 89, 94, 296, 630, 1219
MluNI TGGCCA 1 cut(s) 740
MlyI GAGTC 3 cut(s) 183, 188, 978
MmeI TCCRAC 2 cut(s) 171, 216
Mox20I TGGCCA 1 cut(s) 740
MroI TCCGGA 1 cut(s) 1051
MscI TGGCCA 1 cut(s) 740
MseI TTAA 2 cut(s) 437, 1360
MslI CAYNNNNRTG 4 cut(s) 233, 288, 678, 768
Msp20I TGGCCA 1 cut(s) 740
MspA1I CMGCKG 4 cut(s) 326, 609, 703, 1310
MspI CCGG 5 cut(s) 886, 911, 924, 935, 1052
MspR9I CCNGG 9 cut(s) 205, 256, 278, 424, 536, 573, 799, 911, 936
MunI CAATTG 1 cut(s) 32
MvaI CCWGG 7 cut(s) 205, 256, 278, 424, 536, 573, 799
MvnI CGCG 2 cut(s) 916, 1310
MwoI GCNNNNNNNGC 8 cut(s) 218, 260, 536, 717, 886, 906, 920, 1192
NciI CCSGG 2 cut(s) 911, 936
NdeI CATATG 1 cut(s) 1233
NlaIII CATG 7 cut(s) 184, 232, 245, 561, 677, 1168, 1335
NlaIV GGNNCC 3 cut(s) 354, 1147, 1282
NmuCI GTSAC 1 cut(s) 667
NspI RCATGY 1 cut(s) 561
PceI AGGCCT 3 cut(s) 492, 530, 539
PciI ACATGT 1 cut(s) 557
PcsI WCGNNNNNNNCGW 1 cut(s) 1025
PfeI GAWTC 6 cut(s) 105, 111, 188, 200, 273, 839
PflFI GACNNNGTC 1 cut(s) 7
PkrI GCNGC 8 cut(s) 318, 325, 421, 511, 611, 918, 996, 1185
Ple19I CGATCG 1 cut(s) 896
PleI GAGTC 3 cut(s) 182, 188, 977
PpsI GAGTC 3 cut(s) 182, 188, 977
PpuMI RGGWCCY 2 cut(s) 1146, 1281
PscI ACATGT 1 cut(s) 557
PsiI TTATAA 1 cut(s) 1346
Psp5II RGGWCCY 2 cut(s) 1146, 1281
Psp6I CCWGG 7 cut(s) 203, 254, 276, 422, 534, 571, 797
PspFI CCCAGC 1 cut(s) 308
PspGI CCWGG 7 cut(s) 203, 254, 276, 422, 534, 571, 797
PspN4I GGNNCC 3 cut(s) 354, 1147, 1282
PspPI GGNCC 5 cut(s) 23, 786, 908, 1146, 1281
PspPPI RGGWCCY 2 cut(s) 1146, 1281
PstI CTGCAG 1 cut(s) 1016
PstNI CAGNNNCTG 2 cut(s) 455, 1005
PsuI RGATCY 2 cut(s) 352, 451
PsyI GACNNNGTC 1 cut(s) 7
PvuI CGATCG 1 cut(s) 896
RsaI GTAC 3 cut(s) 38, 374, 698
RsaNI GTAC 3 cut(s) 37, 373, 697
RseI CAYNNNNRTG 4 cut(s) 233, 288, 678, 768
SacII CCGCGG 1 cut(s) 1311
SaqAI TTAA 2 cut(s) 437, 1360
SatI GCNGC 8 cut(s) 317, 324, 420, 510, 610, 917, 995, 1184
Sau96I GGNCC 5 cut(s) 23, 786, 908, 1146, 1281
SchI GAGTC 3 cut(s) 183, 188, 978
ScrFI CCNGG 9 cut(s) 205, 256, 278, 424, 536, 573, 799, 911, 936
SfaNI GCATC 1 cut(s) 295
SfcI CTRYAG 1 cut(s) 1012
SfiI GGCCNNNNNGGCC 1 cut(s) 536
Sfr303I CCGCGG 1 cut(s) 1311
SgrBI CCGCGG 1 cut(s) 1311
SinI GGWCC 3 cut(s) 786, 1146, 1281
SmiMI CAYNNNNRTG 4 cut(s) 233, 288, 678, 768
Sse9I AATT 6 cut(s) 32, 89, 94, 296, 630, 1219
SseBI AGGCCT 3 cut(s) 492, 530, 539
StuI AGGCCT 3 cut(s) 492, 530, 539
StyD4I CCNGG 9 cut(s) 203, 254, 276, 422, 534, 571, 797, 909, 934
StyI CCWWGG 2 cut(s) 348, 1248
TaaI ACNGT 2 cut(s) 696, 983
TaiI ACGT 2 cut(s) 8, 878
TaqI TCGA 3 cut(s) 749, 892, 896
TasI AATT 6 cut(s) 32, 89, 94, 296, 630, 1219
TatI WGTACW 2 cut(s) 36, 372
TauI GCSGC 3 cut(s) 319, 512, 919
TfiI GAWTC 6 cut(s) 105, 111, 188, 200, 273, 839
Tru1I TTAA 2 cut(s) 437, 1360
Tru9I TTAA 2 cut(s) 437, 1360
TscAI CASTG 2 cut(s) 106, 699
TseFI GTSAC 1 cut(s) 667
TseI GCWGC 5 cut(s) 323, 419, 609, 994, 1183
Tsp45I GTSAC 1 cut(s) 667
TspDTI ATGAA 2 cut(s) 1220, 1320
TspRI CASTG 2 cut(s) 106, 699
Tth111I GACNNNGTC 1 cut(s) 7
VpaK11BI GGWCC 3 cut(s) 786, 1146, 1281
XapI RAATTY 1 cut(s) 1219
XceI RCATGY 1 cut(s) 561
XcmI CCANNNNNNNNNTGG 1 cut(s) 733
ZraI GACGTC 2 cut(s) 6, 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.