Protein kinase domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g14260 |
| malus_domestica | MD02G1156300.v1.1 MD02G1156400.v1.1 MD15G1270700.v1.1 |
| prunus_persica | Prupe.7G147500_v2.0.a1 |
| pyrus_communis | pycom02g12340 |
| rosa_chinensis | RchiOBHm_Chr2g0102921 |
| rosa_laevigata | RLG00000017188 |
| rosa_multiflora | Rmu_sc0000388.1_g000045 |
| rosa_roxburghii | Rroxscaffold_2G00140090 Rroxscaffold_2G00140230 |
| rosa_rugosa | Rorug02G0110400 |
| rosa_samantha | Rh2AG158700 Rh2BG165100 Rh2CG165300 Rh2DG163900 Rh3BG293900 Rh3BG294000 |
| rosa_wichuraiana | Rw2G012400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 149, 1546 |
| Acc36I | ACCTGC | 2 cut(s) | 149, 1546 |
| Acc65I | GGTACC | 1 cut(s) | 499 |
| AccB1I | GGYRCC | 2 cut(s) | 499, 1504 |
| AccI | GTMKAC | 1 cut(s) | 428 |
| AciI | CCGC | 3 cut(s) | 231, 1442, 1748 |
| AclWI | GGATC | 2 cut(s) | 124, 656 |
| AcsI | RAATTY | 4 cut(s) | 551, 834, 1420, 1462 |
| AcuI | CTGAAG | 3 cut(s) | 219, 984, 1827 |
| AfaI | GTAC | 6 cut(s) | 344, 501, 547, 1086, 1773, 1842 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 380, 788, 892 |
| AflII | CTTAAG | 1 cut(s) | 1247 |
| AgsI | TTSAA | 7 cut(s) | 185, 541, 717, 737, 985, 1009, 1156 |
| AjnI | CCWGG | 2 cut(s) | 481, 745 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 960, 992 |
| AluBI | AGCT | 9 cut(s) | 59, 86, 250, 474, 576, 635, 720, 1598, 1712 |
| AluI | AGCT | 9 cut(s) | 59, 86, 250, 474, 576, 635, 720, 1598, 1712 |
| Alw21I | GWGCWC | 1 cut(s) | 1362 |
| Alw26I | GTCTC | 2 cut(s) | 214, 1433 |
| Alw44I | GTGCAC | 1 cut(s) | 1358 |
| AlwI | GGATC | 2 cut(s) | 124, 656 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| AoxI | GGCC | 1 cut(s) | 749 |
| ApaLI | GTGCAC | 1 cut(s) | 1358 |
| ApeKI | GCWGC | 2 cut(s) | 289, 1374 |
| ApoI | RAATTY | 4 cut(s) | 551, 834, 1420, 1462 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 989, 1626 |
| Asp718I | GGTACC | 1 cut(s) | 499 |
| AspS9I | GGNCC | 1 cut(s) | 749 |
| AsuHPI | GGTGA | 8 cut(s) | 161, 319, 350, 395, 875, 1138, 1543, 1706 |
| AsuII | TTCGAA | 1 cut(s) | 993 |
| BaeGI | GKGCMC | 1 cut(s) | 1362 |
| BanI | GGYRCC | 2 cut(s) | 499, 1504 |
| BanII | GRGCYC | 1 cut(s) | 1323 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1611, 1643 |
| BbsI | GAAGAC | 1 cut(s) | 982 |
| Bbv12I | GWGCWC | 1 cut(s) | 1362 |
| BbvI | GCAGC | 2 cut(s) | 276, 1386 |
| BccI | CCATC | 4 cut(s) | 1070, 1310, 1607, 1842 |
| BciT130I | CCWGG | 2 cut(s) | 483, 747 |
| BciVI | GTATCC | 1 cut(s) | 1864 |
| BclI | TGATCA | 1 cut(s) | 1161 |
| BcoDI | GTCTC | 2 cut(s) | 214, 1433 |
| BfaI | CTAG | 5 cut(s) | 668, 845, 1088, 1793, 1909 |
| BfmI | CTRYAG | 3 cut(s) | 318, 594, 1017 |
| BfrI | CTTAAG | 1 cut(s) | 1247 |
| BfuAI | ACCTGC | 2 cut(s) | 149, 1546 |
| BfuI | GTATCC | 1 cut(s) | 1864 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1802 |
| BisI | GCNGC | 2 cut(s) | 290, 1375 |
| BlsI | GCNGC | 2 cut(s) | 291, 1376 |
| BmcAI | AGTACT | 3 cut(s) | 344, 1086, 1842 |
| Bme1390I | CCNGG | 2 cut(s) | 483, 747 |
| BmgT120I | GGNCC | 1 cut(s) | 749 |
| BmiI | GGNNCC | 5 cut(s) | 501, 711, 1231, 1322, 1506 |
| BmrFI | CCNGG | 2 cut(s) | 483, 747 |
| BmrI | ACTGGG | 1 cut(s) | 369 |
| BmsI | GCATC | 1 cut(s) | 1102 |
| BmuI | ACTGGG | 1 cut(s) | 369 |
| BpiI | GAAGAC | 1 cut(s) | 982 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 105, 137 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1045 |
| Bpu14I | TTCGAA | 1 cut(s) | 993 |
| BpuEI | CTTGAG | 1 cut(s) | 1255 |
| BsaBI | GATNNNNATC | 2 cut(s) | 414, 1200 |
| BsaJI | CCNNGG | 1 cut(s) | 746 |
| BsaWI | WCCGGW | 1 cut(s) | 1507 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 380, 788, 892 |
| Bse1I | ACTGG | 2 cut(s) | 375, 773 |
| Bse3DI | GCAATG | 4 cut(s) | 151, 957, 1308, 1753 |
| Bse8I | GATNNNNATC | 2 cut(s) | 414, 1200 |
| BseBI | CCWGG | 2 cut(s) | 483, 747 |
| BseDI | CCNNGG | 1 cut(s) | 746 |
| BseGI | GGATG | 3 cut(s) | 664, 1618, 1847 |
| BseJI | GATNNNNATC | 2 cut(s) | 414, 1200 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 380, 788, 892 |
| BseMI | GCAATG | 4 cut(s) | 151, 957, 1308, 1753 |
| BseMII | CTCAG | 5 cut(s) | 31, 96, 237, 285, 1110 |
| BseNI | ACTGG | 2 cut(s) | 375, 773 |
| BseRI | GAGGAG | 3 cut(s) | 1136, 1674, 1710 |
| BseSI | GKGCMC | 1 cut(s) | 1362 |
| BseXI | GCAGC | 2 cut(s) | 276, 1386 |
| BseYI | CCCAGC | 1 cut(s) | 576 |
| BsgI | GTGCAG | 1 cut(s) | 1316 |
| BshFI | GGCC | 1 cut(s) | 751 |
| BshNI | GGYRCC | 2 cut(s) | 499, 1504 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1362 |
| BsiSI | CCGG | 1 cut(s) | 1508 |
| BslFI | GGGAC | 2 cut(s) | 504, 575 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 380, 788, 892 |
| BsmAI | GTCTC | 2 cut(s) | 214, 1433 |
| BsmFI | GGGAC | 2 cut(s) | 504, 575 |
| BsnI | GGCC | 1 cut(s) | 751 |
| Bsp119I | TTCGAA | 1 cut(s) | 993 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1323, 1362 |
| Bsp143I | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| BspACI | CCGC | 3 cut(s) | 231, 1442, 1748 |
| BspANI | GGCC | 1 cut(s) | 751 |
| BspCNI | CTCAG | 5 cut(s) | 30, 95, 238, 284, 1111 |
| BspLI | GGNNCC | 5 cut(s) | 501, 711, 1231, 1322, 1506 |
| BspMI | ACCTGC | 2 cut(s) | 149, 1546 |
| BspPI | GGATC | 2 cut(s) | 124, 656 |
| BspQI | GCTCTTC | 1 cut(s) | 1803 |
| BspT104I | TTCGAA | 1 cut(s) | 993 |
| BspT107I | GGYRCC | 2 cut(s) | 499, 1504 |
| BspTI | CTTAAG | 1 cut(s) | 1247 |
| BsrDI | GCAATG | 4 cut(s) | 151, 957, 1308, 1753 |
| BsrI | ACTGG | 2 cut(s) | 375, 773 |
| BssECI | CCNNGG | 1 cut(s) | 746 |
| BssMI | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| Bst2UI | CCWGG | 2 cut(s) | 483, 747 |
| Bst4CI | ACNGT | 4 cut(s) | 104, 702, 1476, 1736 |
| Bst6I | CTCTTC | 2 cut(s) | 774, 1803 |
| BstAFI | CTTAAG | 1 cut(s) | 1247 |
| BstBI | TTCGAA | 1 cut(s) | 993 |
| BstC8I | GCNNGC | 3 cut(s) | 252, 476, 1798 |
| BstDEI | CTNAG | 7 cut(s) | 17, 82, 246, 271, 506, 1045, 1119 |
| BstF5I | GGATG | 3 cut(s) | 664, 1618, 1847 |
| BstKTI | GATC | 6 cut(s) | 119, 277, 664, 1146, 1164, 1439 |
| BstMAI | GTCTC | 2 cut(s) | 214, 1433 |
| BstMBI | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1050, 1415, 1439, 1802 |
| BstNI | CCWGG | 2 cut(s) | 483, 747 |
| BstNSI | RCATGY | 1 cut(s) | 1182 |
| BstSCI | CCNGG | 2 cut(s) | 481, 745 |
| BstSFI | CTRYAG | 3 cut(s) | 318, 594, 1017 |
| BstSLI | GKGCMC | 1 cut(s) | 1362 |
| BstV1I | GCAGC | 2 cut(s) | 276, 1386 |
| BstV2I | GAAGAC | 1 cut(s) | 982 |
| BsuI | GTATCC | 1 cut(s) | 1864 |
| BsuRI | GGCC | 1 cut(s) | 751 |
| BtsCI | GGATG | 3 cut(s) | 664, 1618, 1847 |
| BtsIMutI | CAGTG | 3 cut(s) | 109, 698, 711 |
| BveI | ACCTGC | 2 cut(s) | 149, 1546 |
| Cac8I | GCNNGC | 3 cut(s) | 252, 476, 1798 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| Cfr13I | GGNCC | 1 cut(s) | 749 |
| CsiI | ACCWGGT | 1 cut(s) | 481 |
| Csp6I | GTAC | 6 cut(s) | 343, 500, 546, 1085, 1772, 1841 |
| CviAII | CATG | 6 cut(s) | 445, 788, 1179, 1219, 1523, 1759 |
| CviQI | GTAC | 6 cut(s) | 343, 500, 546, 1085, 1772, 1841 |
| DdeI | CTNAG | 7 cut(s) | 17, 82, 246, 271, 506, 1045, 1119 |
| DpnI | GATC | 6 cut(s) | 118, 276, 663, 1145, 1163, 1438 |
| DpnII | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| DraI | TTTAAA | 1 cut(s) | 1743 |
| Eam1104I | CTCTTC | 2 cut(s) | 774, 1803 |
| EarI | CTCTTC | 2 cut(s) | 774, 1803 |
| Eco24I | GRGCYC | 1 cut(s) | 1323 |
| Eco32I | GATATC | 1 cut(s) | 1488 |
| Eco57I | CTGAAG | 3 cut(s) | 219, 984, 1827 |
| EcoRI | GAATTC | 2 cut(s) | 834, 1462 |
| EcoRII | CCWGG | 2 cut(s) | 481, 745 |
| EcoRV | GATATC | 1 cut(s) | 1488 |
| EcoT22I | ATGCAT | 1 cut(s) | 679 |
| EcoT38I | GRGCYC | 1 cut(s) | 1323 |
| FaeI | CATG | 6 cut(s) | 448, 791, 1182, 1222, 1526, 1762 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 158, 190, 1028, 1060, 1614, 1646 |
| FaqI | GGGAC | 2 cut(s) | 504, 575 |
| FatI | CATG | 6 cut(s) | 444, 787, 1178, 1218, 1522, 1758 |
| FauNDI | CATATG | 1 cut(s) | 814 |
| FbaI | TGATCA | 1 cut(s) | 1161 |
| FblI | GTMKAC | 1 cut(s) | 428 |
| Fnu4HI | GCNGC | 2 cut(s) | 290, 1375 |
| FokI | GGATG | 3 cut(s) | 671, 1625, 1834 |
| FriOI | GRGCYC | 1 cut(s) | 1323 |
| Fsp4HI | GCNGC | 2 cut(s) | 290, 1375 |
| FspBI | CTAG | 5 cut(s) | 668, 845, 1088, 1793, 1909 |
| GluI | GCNGC | 2 cut(s) | 290, 1375 |
| GsaI | CCCAGC | 1 cut(s) | 580 |
| HaeIII | GGCC | 1 cut(s) | 751 |
| HapII | CCGG | 1 cut(s) | 1508 |
| Hin1II | CATG | 6 cut(s) | 448, 791, 1182, 1222, 1526, 1762 |
| HincII | GTYRAC | 1 cut(s) | 561 |
| HindII | GTYRAC | 1 cut(s) | 561 |
| HindIII | AAGCTT | 1 cut(s) | 472 |
| HinfI | GANTC | 6 cut(s) | 258, 584, 784, 1282, 1830, 1905 |
| HpaII | CCGG | 1 cut(s) | 1508 |
| HphI | GGTGA | 8 cut(s) | 161, 319, 350, 395, 875, 1138, 1543, 1706 |
| Hpy166II | GTNNAC | 4 cut(s) | 429, 561, 1184, 1360 |
| Hpy188I | TCNGA | 9 cut(s) | 238, 247, 274, 420, 783, 1161, 1275, 1296, 1636 |
| Hpy188III | TCNNGA | 3 cut(s) | 89, 175, 1265 |
| Hpy8I | GTNNAC | 4 cut(s) | 429, 561, 1184, 1360 |
| HpyAV | CCTTC | 5 cut(s) | 252, 723, 792, 908, 1441 |
| HpyCH4III | ACNGT | 4 cut(s) | 104, 702, 1476, 1736 |
| HpyCH4IV | ACGT | 1 cut(s) | 1685 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1050, 1415, 1439, 1802 |
| HpyF3I | CTNAG | 7 cut(s) | 17, 82, 246, 271, 506, 1045, 1119 |
| HpySE526I | ACGT | 1 cut(s) | 1685 |
| Hsp92II | CATG | 6 cut(s) | 448, 791, 1182, 1222, 1526, 1762 |
| KpnI | GGTACC | 1 cut(s) | 503 |
| Ksp22I | TGATCA | 1 cut(s) | 1161 |
| Kzo9I | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| LguI | GCTCTTC | 1 cut(s) | 1803 |
| LmnI | GCTCC | 3 cut(s) | 709, 1326, 1750 |
| Lsp1109I | GCAGC | 2 cut(s) | 276, 1386 |
| LweI | GCATC | 1 cut(s) | 1102 |
| MabI | ACCWGGT | 1 cut(s) | 481 |
| MaeI | CTAG | 5 cut(s) | 668, 845, 1088, 1793, 1909 |
| MaeII | ACGT | 1 cut(s) | 1685 |
| MaeIII | GTNAC | 6 cut(s) | 383, 492, 775, 952, 1531, 1582 |
| MalI | GATC | 6 cut(s) | 118, 276, 663, 1145, 1163, 1438 |
| MboI | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| MboII | GAAGA | 6 cut(s) | 761, 977, 982, 1013, 1409, 1820 |
| MfeI | CAATTG | 2 cut(s) | 1542, 1865 |
| MhlI | GDGCHC | 2 cut(s) | 1323, 1362 |
| MlyI | GAGTC | 1 cut(s) | 578 |
| MmeI | TCCRAC | 1 cut(s) | 1259 |
| Mph1103I | ATGCAT | 1 cut(s) | 679 |
| MroXI | GAANNNNTTC | 2 cut(s) | 989, 1626 |
| MseI | TTAA | 8 cut(s) | 38, 470, 612, 680, 1248, 1688, 1742, 1787 |
| MslI | CAYNNNNRTG | 2 cut(s) | 508, 1652 |
| MspA1I | CMGCKG | 2 cut(s) | 576, 1442 |
| MspCI | CTTAAG | 1 cut(s) | 1247 |
| MspI | CCGG | 1 cut(s) | 1508 |
| MspR9I | CCNGG | 2 cut(s) | 483, 747 |
| MunI | CAATTG | 2 cut(s) | 1542, 1865 |
| MvaI | CCWGG | 2 cut(s) | 483, 747 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1050, 1415, 1439, 1802 |
| NdeI | CATATG | 1 cut(s) | 814 |
| NdeII | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| NlaIII | CATG | 6 cut(s) | 448, 791, 1182, 1222, 1526, 1762 |
| NlaIV | GGNNCC | 5 cut(s) | 501, 711, 1231, 1322, 1506 |
| NmuCI | GTSAC | 2 cut(s) | 383, 1531 |
| NsiI | ATGCAT | 1 cut(s) | 679 |
| NspI | RCATGY | 1 cut(s) | 1182 |
| NspV | TTCGAA | 1 cut(s) | 993 |
| PaqCI | CACCTGC | 2 cut(s) | 149, 1546 |
| PciSI | GCTCTTC | 1 cut(s) | 1803 |
| PdmI | GAANNNNTTC | 2 cut(s) | 989, 1626 |
| PfeI | GAWTC | 4 cut(s) | 258, 784, 1282, 1830 |
| PflFI | GACNNNGTC | 1 cut(s) | 587 |
| PkrI | GCNGC | 2 cut(s) | 291, 1376 |
| PleI | GAGTC | 1 cut(s) | 578 |
| PpsI | GAGTC | 1 cut(s) | 578 |
| Psp6I | CCWGG | 2 cut(s) | 481, 745 |
| PspFI | CCCAGC | 1 cut(s) | 576 |
| PspGI | CCWGG | 2 cut(s) | 481, 745 |
| PspN4I | GGNNCC | 5 cut(s) | 501, 711, 1231, 1322, 1506 |
| PspPI | GGNCC | 1 cut(s) | 749 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| PsyI | GACNNNGTC | 1 cut(s) | 587 |
| PvuII | CAGCTG | 1 cut(s) | 576 |
| RsaI | GTAC | 6 cut(s) | 344, 501, 547, 1086, 1773, 1842 |
| RsaNI | GTAC | 6 cut(s) | 343, 500, 546, 1085, 1772, 1841 |
| RseI | CAYNNNNRTG | 2 cut(s) | 508, 1652 |
| SapI | GCTCTTC | 1 cut(s) | 1803 |
| SaqAI | TTAA | 8 cut(s) | 38, 470, 612, 680, 1248, 1688, 1742, 1787 |
| SatI | GCNGC | 2 cut(s) | 290, 1375 |
| Sau3AI | GATC | 6 cut(s) | 116, 274, 661, 1143, 1161, 1436 |
| Sau96I | GGNCC | 1 cut(s) | 749 |
| ScaI | AGTACT | 3 cut(s) | 344, 1086, 1842 |
| SchI | GAGTC | 1 cut(s) | 578 |
| ScrFI | CCNGG | 2 cut(s) | 483, 747 |
| SduI | GDGCHC | 2 cut(s) | 1323, 1362 |
| SexAI | ACCWGGT | 1 cut(s) | 481 |
| SfaNI | GCATC | 1 cut(s) | 1102 |
| SfcI | CTRYAG | 3 cut(s) | 318, 594, 1017 |
| SfuI | TTCGAA | 1 cut(s) | 993 |
| SmiI | ATTTAAAT | 1 cut(s) | 1743 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 508, 1652 |
| SmlI | CTYRAG | 2 cut(s) | 1234, 1247 |
| SmoI | CTYRAG | 2 cut(s) | 1234, 1247 |
| SsiI | CCGC | 3 cut(s) | 231, 1442, 1748 |
| SspI | AATATT | 2 cut(s) | 1680, 1889 |
| SspMI | CTAG | 5 cut(s) | 668, 845, 1088, 1793, 1909 |
| StyD4I | CCNGG | 2 cut(s) | 481, 745 |
| SwaI | ATTTAAAT | 1 cut(s) | 1743 |
| TaaI | ACNGT | 4 cut(s) | 104, 702, 1476, 1736 |
| TaiI | ACGT | 1 cut(s) | 1688 |
| TaqI | TCGA | 2 cut(s) | 993, 1074 |
| TatI | WGTACW | 3 cut(s) | 342, 1084, 1840 |
| TfiI | GAWTC | 4 cut(s) | 258, 784, 1282, 1830 |
| Tru1I | TTAA | 8 cut(s) | 38, 470, 612, 680, 1248, 1688, 1742, 1787 |
| Tru9I | TTAA | 8 cut(s) | 38, 470, 612, 680, 1248, 1688, 1742, 1787 |
| TscAI | CASTG | 3 cut(s) | 109, 705, 711 |
| TseFI | GTSAC | 2 cut(s) | 383, 1531 |
| TseI | GCWGC | 2 cut(s) | 289, 1374 |
| Tsp45I | GTSAC | 2 cut(s) | 383, 1531 |
| TspDTI | ATGAA | 4 cut(s) | 776, 1207, 1330, 1455 |
| TspRI | CASTG | 3 cut(s) | 109, 705, 711 |
| Tth111I | GACNNNGTC | 1 cut(s) | 587 |
| Vha464I | CTTAAG | 1 cut(s) | 1247 |
| VneI | GTGCAC | 1 cut(s) | 1358 |
| XapI | RAATTY | 4 cut(s) | 551, 834, 1420, 1462 |
| XceI | RCATGY | 1 cut(s) | 1182 |
| XmiI | GTMKAC | 1 cut(s) | 428 |
| XmnI | GAANNNNTTC | 2 cut(s) | 989, 1626 |
| XspI | CTAG | 5 cut(s) | 668, 845, 1088, 1793, 1909 |
| ZrmI | AGTACT | 3 cut(s) | 344, 1086, 1842 |
| Zsp2I | ATGCAT | 1 cut(s) | 679 |