Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008798

Physical Location & Seq

Genomic Coordinates Forward (+)

16528847 .. 16532327

Gene Structure 3481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G156700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 960 bp

ATGGCGATGGTTTCTATGCTCATTTCACTCCCTACCCTGACTACTCCAAACTCCAGCCGAGTCAACCGGTATTGGCAAGCACCAAAAAGGTCGTCTGCAATGGCTCTTGCAAGTGCCAACACAGAGATTGCTACTACAGGAGTGAGATTTGCAGAGGGTGAAGAGAAGTTACCCAAGGTCGTTTTGACTAGCTCTGGTGGCAGTGAGGCAGATATATATCTGTTTGGTGGTTGCATTACGTCTTGGAAAGTTCCAAATGGAAGGGACCTCCTTTTTGTTCGACCTGATGCTGTCTTCAATAAGAAAAAACCAATCAGTGGAGGCGTTCCACATTGTTTTCCACAGTTTGGACCAGGCACAATTCAGCAGCATGGATTTGCAAGAAACTTGGACTGGTCTGTCATTGATTCTGAAAATGTGCAAGGAGATCCTGCCATAACTTTAGAACTAAAGGATGGTGAATACAGTCGTTCCATGTGGGATTTCAGCTTTCAAGCTTTGTACAAGGTCACTTTGCAAACAAAGAGCCTTTCCACCGAACTTGTAATTAAAAATACGGACAGCAAGCCATTTTCATTCAGCACCGCATTGCACACATACTTCCGCGCTTCTGCACAAGGGGCATCGGTTAAAGGTTTGAAAGGCTGCAAAACACTGAATAAAGATCCTGACCCCAAGAATCCATTGGAGGGCAAGGAAGAAAGGGATGGGGTCACTTTTCCTGGATTCGTGGATTGCGTATACCTGGAAGCCCCTAATGAGTTGAATCTTGATAATGGCTTAGGTGACATAATATCTATCAAGAACACTAATTGGACAGATGCTGTTTTGTGGAACCCCTATCTGACAATGGAAGCATGCTACAAAGATTTTGTTTGTGTGGAAAATGCAAAGATTGGAAACGTCCAGCTGGAGCCTGGTCATACTTGGACTGCTACACAGCATCTTAGCATCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko01100 ko01110 ko01120 ko01130 map00010 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldose_epim

Protein Analysis

320

Amino Acids

35.08

Weight (kDa)

6.0

Isoelectric Point (pI)

25.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66530 AT5G66530 AT5G66530 AT5G66530
fragaria_vesca	FvH4_1g13030
malus_domestica	MD02G1144900.v1.1 MD15G1259100.v1.1
prunus_persica	Prupe.7G156700_v2.0.a1
pyrus_communis	pycom02g11480 pycom15g22730
rosa_chinensis	RchiOBHm_Chr2g0101191
rosa_laevigata	RLG00000017054
rosa_multiflora	Rmu_sc0006314.1_g000006 Rmu_sc0007698.1_g000005 Rmu_sc0010885.1_g000002
rosa_roxburghii	Rroxscaffold_2G00141510
rosa_rugosa	Rorug02G0100300
rosa_samantha	Rh2AG144300 Rh2BG149300 Rh2CG150600 Rh2DG149800 Rh6BG056500
rosa_wichuraiana	Rw2G011310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	398
AccB7I	CCANNNNNTGG	2 cut(s)	317, 347
AccI	GTMKAC	1 cut(s)	741
AccII	CGCG	1 cut(s)	606
AciI	CCGC	2 cut(s)	585, 604
AclWI	GGATC	2 cut(s)	422, 659
AfaI	GTAC	1 cut(s)	503
AfiI	CCNNNNNNNGG	3 cut(s)	317, 347, 689
AgeI	ACCGGT	1 cut(s)	66
AgsI	TTSAA	4 cut(s)	298, 494, 640, 766
AjnI	CCWGG	4 cut(s)	352, 721, 744, 916
AluBI	AGCT	4 cut(s)	192, 489, 497, 910
AluI	AGCT	4 cut(s)	192, 489, 497, 910
AlwI	GGATC	2 cut(s)	422, 659
AlwNI	CAGNNNCTG	1 cut(s)	824
ApeKI	GCWGC	2 cut(s)	367, 645
ArsI	GACNNNNNNTTYG	4 cut(s)	77, 109, 257, 289
AsiGI	ACCGGT	1 cut(s)	66
AspLEI	GCGC	1 cut(s)	608
AspS9I	GGNCC	2 cut(s)	265, 350
AsuHPI	GGTGA	3 cut(s)	170, 470, 797
AvaII	GGWCC	2 cut(s)	265, 350
BarI	GAAGNNNNNNTAC	2 cut(s)	153, 185
BbsI	GAAGAC	1 cut(s)	286
BbvI	GCAGC	2 cut(s)	379, 632
BccI	CCATC	2 cut(s)	449, 701
BciT130I	CCWGG	4 cut(s)	354, 723, 746, 918
BfaI	CTAG	1 cut(s)	189
BfmI	CTRYAG	1 cut(s)	135
BisI	GCNGC	2 cut(s)	368, 646
BlsI	GCNGC	2 cut(s)	369, 647
Bme1390I	CCNGG	4 cut(s)	354, 723, 746, 918
Bme18I	GGWCC	2 cut(s)	265, 350
BmgT120I	GGNCC	2 cut(s)	265, 350
BmiI	GGNNCC	3 cut(s)	266, 836, 915
BmrFI	CCNGG	4 cut(s)	354, 723, 746, 918
BmsI	GCATC	4 cut(s)	277, 632, 811, 952
BpiI	GAAGAC	1 cut(s)	286
BpmI	CTGGAG	2 cut(s)	37, 932
Bpu10I	CCTNAGC	1 cut(s)	781
BsaBI	GATNNNNATC	1 cut(s)	216
BsaJI	CCNNGG	1 cut(s)	174
BsaWI	WCCGGW	1 cut(s)	66
Bsc4I	CCNNNNNNNGG	3 cut(s)	317, 347, 689
Bse118I	RCCGGY	1 cut(s)	66
Bse1I	ACTGG	1 cut(s)	398
Bse3DI	GCAATG	2 cut(s)	105, 587
Bse8I	GATNNNNATC	1 cut(s)	216
BseBI	CCWGG	4 cut(s)	354, 723, 746, 918
BseDI	CCNNGG	1 cut(s)	174
BseGI	GGATG	2 cut(s)	460, 712
BseJI	GATNNNNATC	1 cut(s)	216
BseLI	CCNNNNNNNGG	3 cut(s)	317, 347, 689
BseMI	GCAATG	2 cut(s)	105, 587
BseNI	ACTGG	1 cut(s)	398
BseXI	GCAGC	2 cut(s)	379, 632
BsgI	GTGCAG	1 cut(s)	597
Bsh1236I	CGCG	1 cut(s)	606
BshTI	ACCGGT	1 cut(s)	66
BsiSI	CCGG	1 cut(s)	67
BslFI	GGGAC	1 cut(s)	278
BslI	CCNNNNNNNGG	3 cut(s)	317, 347, 689
BsmFI	GGGAC	1 cut(s)	278
Bsp1407I	TGTACA	1 cut(s)	501
Bsp143I	GATC	2 cut(s)	427, 664
BspACI	CCGC	2 cut(s)	585, 604
BspFNI	CGCG	1 cut(s)	606
BspLI	GGNNCC	3 cut(s)	266, 836, 915
BspPI	GGATC	2 cut(s)	422, 659
BsrDI	GCAATG	2 cut(s)	105, 587
BsrFI	RCCGGY	1 cut(s)	66
BsrGI	TGTACA	1 cut(s)	501
BsrI	ACTGG	1 cut(s)	398
BssAI	RCCGGY	1 cut(s)	66
BssECI	CCNNGG	1 cut(s)	174
BssMI	GATC	2 cut(s)	427, 664
BssNAI	GTATAC	1 cut(s)	742
BssT1I	CCWWGG	1 cut(s)	174
Bst1107I	GTATAC	1 cut(s)	742
Bst2UI	CCWGG	4 cut(s)	354, 723, 746, 918
Bst4CI	ACNGT	2 cut(s)	345, 467
Bst6I	CTCTTC	1 cut(s)	156
BstAUI	TGTACA	1 cut(s)	501
BstC8I	GCNNGC	3 cut(s)	78, 566, 859
BstDEI	CTNAG	2 cut(s)	781, 947
BstF5I	GGATG	2 cut(s)	460, 712
BstFNI	CGCG	1 cut(s)	606
BstHHI	GCGC	1 cut(s)	608
BstKTI	GATC	2 cut(s)	430, 667
BstMBI	GATC	2 cut(s)	427, 664
BstMWI	GCNNNNNNNGC	2 cut(s)	198, 620
BstNI	CCWGG	4 cut(s)	354, 723, 746, 918
BstNSI	RCATGY	1 cut(s)	861
BstSCI	CCNGG	4 cut(s)	352, 721, 744, 916
BstSFI	CTRYAG	1 cut(s)	135
BstUI	CGCG	1 cut(s)	606
BstV1I	GCAGC	2 cut(s)	379, 632
BstV2I	GAAGAC	1 cut(s)	286
BstX2I	RGATCY	2 cut(s)	427, 664
BstYI	RGATCY	2 cut(s)	427, 664
BstZ17I	GTATAC	1 cut(s)	742
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	2 cut(s)	460, 712
BtsI	GCAGTG	1 cut(s)	208
BtsIMutI	CAGTG	3 cut(s)	208, 322, 653
Cac8I	GCNNGC	3 cut(s)	78, 566, 859
CaiI	CAGNNNCTG	1 cut(s)	824
CfoI	GCGC	1 cut(s)	608
Cfr10I	RCCGGY	1 cut(s)	66
Cfr13I	GGNCC	2 cut(s)	265, 350
Csp6I	GTAC	1 cut(s)	502
CspAI	ACCGGT	1 cut(s)	66
CspCI	CAANNNNNGTGG	2 cut(s)	523, 558
CviAII	CATG	3 cut(s)	371, 475, 858
CviQI	GTAC	1 cut(s)	502
DdeI	CTNAG	2 cut(s)	781, 947
DpnI	GATC	2 cut(s)	429, 666
DpnII	GATC	2 cut(s)	427, 664
DrdI	GACNNNNNNGTC	1 cut(s)	398
DseDI	GACNNNNNNGTC	1 cut(s)	398
Eam1104I	CTCTTC	1 cut(s)	156
EarI	CTCTTC	1 cut(s)	156
Eco130I	CCWWGG	1 cut(s)	174
Eco47I	GGWCC	2 cut(s)	265, 350
EcoO109I	RGGNCCY	1 cut(s)	265
EcoRII	CCWGG	4 cut(s)	352, 721, 744, 916
EcoT14I	CCWWGG	1 cut(s)	174
ErhI	CCWWGG	1 cut(s)	174
FaeI	CATG	3 cut(s)	374, 478, 861
FaqI	GGGAC	1 cut(s)	278
FatI	CATG	3 cut(s)	370, 474, 857
FblI	GTMKAC	1 cut(s)	741
Fnu4HI	GCNGC	2 cut(s)	368, 646
FokI	GGATG	2 cut(s)	467, 719
Fsp4HI	GCNGC	2 cut(s)	368, 646
FspBI	CTAG	1 cut(s)	189
GlaI	GCGC	1 cut(s)	607
GluI	GCNGC	2 cut(s)	368, 646
GsuI	CTGGAG	2 cut(s)	37, 932
HapII	CCGG	1 cut(s)	67
HhaI	GCGC	1 cut(s)	608
Hin1II	CATG	3 cut(s)	374, 478, 861
Hin6I	GCGC	1 cut(s)	606
HinP1I	GCGC	1 cut(s)	606
HincII	GTYRAC	1 cut(s)	64
HindII	GTYRAC	1 cut(s)	64
HindIII	AAGCTT	1 cut(s)	495
HinfI	GANTC	5 cut(s)	60, 407, 679, 726, 766
HpaII	CCGG	1 cut(s)	67
HphI	GGTGA	3 cut(s)	170, 470, 797
Hpy166II	GTNNAC	2 cut(s)	64, 742
Hpy188I	TCNGA	2 cut(s)	412, 846
Hpy188III	TCNNGA	3 cut(s)	668, 770, 802
Hpy8I	GTNNAC	2 cut(s)	64, 742
HpyAV	CCTTC	1 cut(s)	255
HpyCH4III	ACNGT	2 cut(s)	345, 467
HpyCH4IV	ACGT	2 cut(s)	239, 903
HpyF10VI	GCNNNNNNNGC	2 cut(s)	198, 620
HpyF3I	CTNAG	2 cut(s)	781, 947
HpySE526I	ACGT	2 cut(s)	239, 903
Hsp92II	CATG	3 cut(s)	374, 478, 861
HspAI	GCGC	1 cut(s)	606
Kzo9I	GATC	2 cut(s)	427, 664
LmnI	GCTCC	1 cut(s)	913
Lsp1109I	GCAGC	2 cut(s)	379, 632
LweI	GCATC	4 cut(s)	277, 632, 811, 952
MaeI	CTAG	1 cut(s)	189
MaeII	ACGT	2 cut(s)	239, 903
MaeIII	GTNAC	4 cut(s)	168, 508, 712, 785
MalI	GATC	2 cut(s)	429, 666
MboI	GATC	2 cut(s)	427, 664
MboII	GAAGA	3 cut(s)	173, 286, 710
MfeI	CAATTG	1 cut(s)	955
MflI	RGATCY	2 cut(s)	427, 664
MluCI	AATT	4 cut(s)	360, 546, 811, 955
MlyI	GAGTC	1 cut(s)	69
MnlI	CCTC	5 cut(s)	148, 199, 278, 314, 682
MseI	TTAA	2 cut(s)	549, 630
MspA1I	CMGCKG	1 cut(s)	910
MspI	CCGG	1 cut(s)	67
MspR9I	CCNGG	4 cut(s)	354, 723, 746, 918
MunI	CAATTG	1 cut(s)	955
MvaI	CCWGG	4 cut(s)	354, 723, 746, 918
MvnI	CGCG	1 cut(s)	606
MwoI	GCNNNNNNNGC	2 cut(s)	198, 620
NdeII	GATC	2 cut(s)	427, 664
NlaIII	CATG	3 cut(s)	374, 478, 861
NlaIV	GGNNCC	3 cut(s)	266, 836, 915
NmeAIII	GCCGAG	1 cut(s)	83
NmuCI	GTSAC	3 cut(s)	508, 712, 785
NspI	RCATGY	1 cut(s)	861
PaeI	GCATGC	1 cut(s)	861
PcsI	WCGNNNNNNNCGW	1 cut(s)	735
PfeI	GAWTC	4 cut(s)	407, 679, 726, 766
PflMI	CCANNNNNTGG	2 cut(s)	317, 347
PfoI	TCCNGGA	1 cut(s)	721
PinAI	ACCGGT	1 cut(s)	66
PkrI	GCNGC	2 cut(s)	369, 647
PleI	GAGTC	1 cut(s)	68
PpsI	GAGTC	1 cut(s)	68
PpuMI	RGGWCCY	1 cut(s)	265
Psp5II	RGGWCCY	1 cut(s)	265
Psp6I	CCWGG	4 cut(s)	352, 721, 744, 916
PspGI	CCWGG	4 cut(s)	352, 721, 744, 916
PspN4I	GGNNCC	3 cut(s)	266, 836, 915
PspPI	GGNCC	2 cut(s)	265, 350
PspPPI	RGGWCCY	1 cut(s)	265
PstNI	CAGNNNCTG	1 cut(s)	824
PsuI	RGATCY	2 cut(s)	427, 664
PvuII	CAGCTG	1 cut(s)	910
RsaI	GTAC	1 cut(s)	503
RsaNI	GTAC	1 cut(s)	502
SaqAI	TTAA	2 cut(s)	549, 630
SatI	GCNGC	2 cut(s)	368, 646
Sau3AI	GATC	2 cut(s)	427, 664
Sau96I	GGNCC	2 cut(s)	265, 350
SchI	GAGTC	1 cut(s)	69
ScrFI	CCNGG	4 cut(s)	354, 723, 746, 918
SfaNI	GCATC	4 cut(s)	277, 632, 811, 952
SfcI	CTRYAG	1 cut(s)	135
SinI	GGWCC	2 cut(s)	265, 350
SphI	GCATGC	1 cut(s)	861
Sse9I	AATT	4 cut(s)	360, 546, 811, 955
SsiI	CCGC	2 cut(s)	585, 604
SspMI	CTAG	1 cut(s)	189
StyD4I	CCNGG	4 cut(s)	352, 721, 744, 916
StyI	CCWWGG	1 cut(s)	174
TaaI	ACNGT	2 cut(s)	345, 467
TaiI	ACGT	2 cut(s)	242, 906
TaqI	TCGA	1 cut(s)	280
TasI	AATT	4 cut(s)	360, 546, 811, 955
TatI	WGTACW	1 cut(s)	501
TfiI	GAWTC	4 cut(s)	407, 679, 726, 766
Tru1I	TTAA	2 cut(s)	549, 630
Tru9I	TTAA	2 cut(s)	549, 630
TscAI	CASTG	3 cut(s)	208, 322, 660
TseFI	GTSAC	3 cut(s)	508, 712, 785
TseI	GCWGC	2 cut(s)	367, 645
Tsp45I	GTSAC	3 cut(s)	508, 712, 785
TspDTI	ATGAA	1 cut(s)	564
TspGWI	ACGGA	1 cut(s)	572
TspRI	CASTG	3 cut(s)	208, 322, 660
Van91I	CCANNNNNTGG	2 cut(s)	317, 347
VpaK11BI	GGWCC	2 cut(s)	265, 350
XceI	RCATGY	1 cut(s)	861
XcmI	CCANNNNNNNNNTGG	2 cut(s)	682, 914
XmiI	GTMKAC	1 cut(s)	741
XspI	CTAG	1 cut(s)	189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.