pycom02g11480

Belongs to the glucose-6-phosphate 1-epimerase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
8093100 .. 8096186
3087 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g11480.4

Sequence Viewer

Length: 1146 bp
ATGAAACGAAACGGGTTAAATGATACTTCATGTTGGAATATCCGAATTTCTATATTTGGTCCCTGGGCTTGGCGGGTGGTGGCGTGGTACCCGACGGTCACAGAAGAAGATTTGAGTATATGGAGTGGAACCACACAAACCAACCCGCTCGACTCGACGAAGAAGATGGCGATGGCGATGGTTTCTATGCTCGTTTCGCTCCCCACCCTCACTCCTCCCAATTCCCGCCGAGTCAACCGGTTTTGGCAAACAACGCCAAAAACGTCGTCATCCGTGATGGCTGTTGCAAGCGGCGCCGGAAGCAAAGTGAGCGCTACTGCAGGGGTGAAATTTGCAGAGGGAGAAGAGAAATTGCCCAAGGTCGTTTTGACCAGCGCCGGCGGCAGTGAGGCGGATGTATATTTATATGGCGGTGTTATTACTTCTTGGAAAGTCCCAAATGGGAGGGACCTGCTTTTTGTTCGACCTGATGCGGTGTTCAACAAGAAGAAACCAATCAGTGGAGGCGTTCCACATTGTTTTCCACAGTTTGGACCAGGCCCTATGCAGCAGCACGGATTTGCAAGAAATCTGGACTGGTCCGTCATTGATTCTGAAAATGTGCAAGGAGATCGATCTACCATAACTTTAGAACTAAAGGATGGTGAATACAGTCGCTCAATGTGGGATTTCAGCTTTCAAGCTTTGTACAAGGTCACTTTGCAACCAAAGAGCCTTTCCACCGAACTTGTAATTAAAAATACAGACAGCAAGCCATTTTCATTCAGCACCGCATTGCATACATACTTCCGGGCTGCTGTACAAGGGGCATCAGTTAAAGGTTTGAAAGGCTGCAAAACACTTAATAAAGATCCCGATCCCAAGAATCCACTGGAGGGCAAGGAAGAAAGGGATGGGATCACTTTTCCTGGATTCGTGGATTGCGTATACCTGGATGCCCCTGATGAGTTACATCTTGATAATGGCTTAGATGATCTAATATCTATCAAGAACACAAATTGGACAGATGCTGTTTTGTGGAACCCATATCTGACAATGGAAGCATGCTACAAAGATTTTGTTTGTGTTGAAAATGCAAAGATTGGAAACGTACAGCTGGAGCCTGGTAATACGTGGATTGCTACGCAACATCTTAGCATTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

382

Amino Acids

42.1

Weight (kDa)

6.54

Isoelectric Point (pI)

26.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 581
Acc36I ACCTGC 1 cut(s) 459
Acc65I GGTACC 1 cut(s) 87
AccB1I GGYRCC 2 cut(s) 87, 293
AccB7I CCANNNNNTGG 2 cut(s) 500, 530
AccBSI CCGCTC 1 cut(s) 148
AccI GTMKAC 1 cut(s) 927
AciI CCGC 9 cut(s) 73, 146, 226, 291, 381, 392, 411, 473, 771
AclWI GGATC 3 cut(s) 845, 851, 905
AcsI RAATTY 2 cut(s) 45, 329
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 4 cut(s) 89, 689, 801, 1092
AfeI AGCGCT 1 cut(s) 313
AfiI CCNNNNNNNGG 4 cut(s) 69, 500, 530, 875
AgeI ACCGGT 1 cut(s) 237
AgsI TTSAA 4 cut(s) 481, 680, 826, 1070
AjnI CCWGG 5 cut(s) 62, 535, 907, 930, 1102
AjuI GAANNNNNNNTTGG 2 cut(s) 700, 732
AluBI AGCT 3 cut(s) 675, 683, 1096
AluI AGCT 3 cut(s) 675, 683, 1096
AlwI GGATC 3 cut(s) 845, 851, 905
AlwNI CAGNNNCTG 1 cut(s) 1010
Aor51HI AGCGCT 1 cut(s) 313
AoxI GGCC 1 cut(s) 538
ApeKI GCWGC 4 cut(s) 547, 550, 794, 831
ApoI RAATTY 2 cut(s) 45, 329
ArsI GACNNNNNNTTYG 4 cut(s) 251, 283, 440, 472
AseI ATTAAT 1 cut(s) 1140
AsiGI ACCGGT 1 cut(s) 237
Asp718I GGTACC 1 cut(s) 87
AspLEI GCGC 3 cut(s) 296, 314, 377
AspS9I GGNCC 5 cut(s) 59, 448, 533, 539, 579
AsuC2I CCSGG 1 cut(s) 791
AsuHPI GGTGA 2 cut(s) 337, 656
AvaII GGWCC 4 cut(s) 59, 448, 533, 579
BanI GGYRCC 2 cut(s) 87, 293
BbvI GCAGC 4 cut(s) 559, 562, 781, 818
BccI CCATC 6 cut(s) 160, 166, 172, 271, 635, 887
BcgI CGANNNNNNTGC 2 cut(s) 593, 627
BciT130I CCWGG 5 cut(s) 64, 537, 909, 932, 1104
BcnI CCSGG 1 cut(s) 791
BfmI CTRYAG 1 cut(s) 318
BfoI RGCGCY 3 cut(s) 297, 315, 378
BfuAI ACCTGC 1 cut(s) 459
BisI GCNGC 6 cut(s) 292, 382, 548, 551, 795, 832
BlsI GCNGC 6 cut(s) 293, 383, 549, 552, 796, 833
Bme1390I CCNGG 6 cut(s) 64, 537, 791, 909, 932, 1104
Bme18I GGWCC 4 cut(s) 59, 448, 533, 579
BmgT120I GGNCC 5 cut(s) 59, 448, 533, 539, 579
BmiI GGNNCC 7 cut(s) 61, 89, 130, 295, 449, 1022, 1101
BmrFI CCNGG 6 cut(s) 64, 537, 791, 909, 932, 1104
BmsI GCATC 4 cut(s) 460, 818, 925, 997
BpmI CTGGAG 2 cut(s) 893, 1118
BpuMI CCSGG 1 cut(s) 791
Bsa29I ATCGAT 1 cut(s) 613
BsaAI YACGTR 1 cut(s) 1113
BsaBI GATNNNNATC 1 cut(s) 855
BsaHI GRCGYC 1 cut(s) 294
BsaJI CCNNGG 3 cut(s) 62, 63, 357
BsaWI WCCGGW 1 cut(s) 237
BsaXI ACNNNNNCTCC 2 cut(s) 196, 226
Bsc4I CCNNNNNNNGG 4 cut(s) 69, 500, 530, 875
Bse118I RCCGGY 2 cut(s) 237, 377
Bse1I ACTGG 2 cut(s) 581, 876
Bse3DI GCAATG 1 cut(s) 773
Bse8I GATNNNNATC 1 cut(s) 855
BseBI CCWGG 5 cut(s) 64, 537, 909, 932, 1104
BseCI ATCGAT 1 cut(s) 613
BseDI CCNNGG 3 cut(s) 62, 63, 357
BseGI GGATG 5 cut(s) 269, 400, 646, 898, 940
BseJI GATNNNNATC 1 cut(s) 855
BseLI CCNNNNNNNGG 4 cut(s) 69, 500, 530, 875
BseMI GCAATG 1 cut(s) 773
BseNI ACTGG 2 cut(s) 581, 876
BseRI GAGGAG 1 cut(s) 204
BseXI GCAGC 4 cut(s) 559, 562, 781, 818
BshFI GGCC 1 cut(s) 540
BshNI GGYRCC 2 cut(s) 87, 293
BshTI ACCGGT 1 cut(s) 237
BshVI ATCGAT 1 cut(s) 613
BsiSI CCGG 4 cut(s) 238, 297, 378, 790
BslFI GGGAC 3 cut(s) 45, 419, 461
BslI CCNNNNNNNGG 4 cut(s) 69, 500, 530, 875
BsmFI GGGAC 3 cut(s) 45, 419, 461
BsnI GGCC 1 cut(s) 540
Bsp1407I TGTACA 2 cut(s) 687, 799
Bsp143I GATC 6 cut(s) 610, 614, 850, 856, 897, 973
BspACI CCGC 9 cut(s) 73, 146, 226, 291, 381, 392, 411, 473, 771
BspANI GGCC 1 cut(s) 540
BspDI ATCGAT 1 cut(s) 613
BspLI GGNNCC 7 cut(s) 61, 89, 130, 295, 449, 1022, 1101
BspMAI CTGCAG 1 cut(s) 322
BspMI ACCTGC 1 cut(s) 459
BspPI GGATC 3 cut(s) 845, 851, 905
BspT107I GGYRCC 2 cut(s) 87, 293
BsrBI CCGCTC 1 cut(s) 148
BsrDI GCAATG 1 cut(s) 773
BsrFI RCCGGY 2 cut(s) 237, 377
BsrGI TGTACA 2 cut(s) 687, 799
BsrI ACTGG 2 cut(s) 581, 876
BssAI RCCGGY 2 cut(s) 237, 377
BssECI CCNNGG 3 cut(s) 62, 63, 357
BssMI GATC 6 cut(s) 610, 614, 850, 856, 897, 973
BssNAI GTATAC 1 cut(s) 928
BssNI GRCGYC 1 cut(s) 294
BssT1I CCWWGG 1 cut(s) 357
Bst1107I GTATAC 1 cut(s) 928
Bst2UI CCWGG 5 cut(s) 64, 537, 909, 932, 1104
Bst4CI ACNGT 3 cut(s) 97, 528, 653
Bst6I CTCTTC 1 cut(s) 339
BstACI GRCGYC 1 cut(s) 294
BstAUI TGTACA 2 cut(s) 687, 799
BstBAI YACGTR 1 cut(s) 1113
BstC8I GCNNGC 4 cut(s) 289, 379, 752, 1045
BstDEI CTNAG 2 cut(s) 967, 1133
BstF5I GGATG 5 cut(s) 269, 400, 646, 898, 940
BstH2I RGCGCY 3 cut(s) 297, 315, 378
BstHHI GCGC 3 cut(s) 296, 314, 377
BstKTI GATC 6 cut(s) 613, 617, 853, 859, 900, 976
BstMBI GATC 6 cut(s) 610, 614, 850, 856, 897, 973
BstMWI GCNNNNNNNGC 6 cut(s) 196, 253, 293, 300, 309, 381
BstNI CCWGG 5 cut(s) 64, 537, 909, 932, 1104
BstNSI RCATGY 1 cut(s) 1047
BstSCI CCNGG 6 cut(s) 62, 535, 789, 907, 930, 1102
BstSFI CTRYAG 1 cut(s) 318
BstV1I GCAGC 4 cut(s) 559, 562, 781, 818
BstX2I RGATCY 1 cut(s) 850
BstYI RGATCY 1 cut(s) 850
BstZ17I GTATAC 1 cut(s) 928
Bsu15I ATCGAT 1 cut(s) 613
BsuRI GGCC 1 cut(s) 540
BsuTUI ATCGAT 1 cut(s) 613
BtgZI GCGATG 2 cut(s) 185, 191
BtsCI GGATG 5 cut(s) 269, 400, 646, 898, 940
BtsI GCAGTG 1 cut(s) 391
BtsIMutI CAGTG 3 cut(s) 391, 505, 869
BveI ACCTGC 1 cut(s) 459
Cac8I GCNNGC 4 cut(s) 289, 379, 752, 1045
CaiI CAGNNNCTG 1 cut(s) 1010
CfoI GCGC 3 cut(s) 296, 314, 377
Cfr10I RCCGGY 2 cut(s) 237, 377
Cfr13I GGNCC 5 cut(s) 59, 448, 533, 539, 579
ClaI ATCGAT 1 cut(s) 613
Csp6I GTAC 4 cut(s) 88, 688, 800, 1091
CspAI ACCGGT 1 cut(s) 237
CspCI CAANNNNNGTGG 2 cut(s) 709, 744
CviAII CATG 2 cut(s) 30, 1044
CviQI GTAC 4 cut(s) 88, 688, 800, 1091
DdeI CTNAG 2 cut(s) 967, 1133
DinI GGCGCC 1 cut(s) 295
DpnI GATC 6 cut(s) 612, 616, 852, 858, 899, 975
DpnII GATC 6 cut(s) 610, 614, 850, 856, 897, 973
DrdI GACNNNNNNGTC 1 cut(s) 581
DseDI GACNNNNNNGTC 1 cut(s) 581
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
EciI GGCGGA 1 cut(s) 407
Eco130I CCWWGG 1 cut(s) 357
Eco47I GGWCC 4 cut(s) 59, 448, 533, 579
Eco47III AGCGCT 1 cut(s) 313
EcoO109I RGGNCCY 2 cut(s) 448, 539
EcoRII CCWGG 5 cut(s) 62, 535, 907, 930, 1102
EcoT14I CCWWGG 1 cut(s) 357
EgeI GGCGCC 1 cut(s) 295
EheI GGCGCC 1 cut(s) 295
ErhI CCWWGG 1 cut(s) 357
FaeI CATG 2 cut(s) 33, 1047
FaqI GGGAC 3 cut(s) 45, 419, 461
FatI CATG 2 cut(s) 29, 1043
FauI CCCGC 3 cut(s) 66, 153, 233
FblI GTMKAC 1 cut(s) 927
Fnu4HI GCNGC 6 cut(s) 292, 382, 548, 551, 795, 832
FokI GGATG 5 cut(s) 256, 407, 653, 905, 947
Fsp4HI GCNGC 6 cut(s) 292, 382, 548, 551, 795, 832
GlaI GCGC 3 cut(s) 295, 313, 376
GluI GCNGC 6 cut(s) 292, 382, 548, 551, 795, 832
GsuI CTGGAG 2 cut(s) 893, 1118
HaeII RGCGCY 3 cut(s) 297, 315, 378
HaeIII GGCC 1 cut(s) 540
HapII CCGG 4 cut(s) 238, 297, 378, 790
HhaI GCGC 3 cut(s) 296, 314, 377
Hin1I GRCGYC 1 cut(s) 294
Hin1II CATG 2 cut(s) 33, 1047
Hin6I GCGC 3 cut(s) 294, 312, 375
HinP1I GCGC 3 cut(s) 294, 312, 375
HincII GTYRAC 1 cut(s) 235
HindII GTYRAC 1 cut(s) 235
HindIII AAGCTT 1 cut(s) 681
HinfI GANTC 5 cut(s) 152, 231, 590, 865, 912
HpaII CCGG 4 cut(s) 238, 297, 378, 790
HphI GGTGA 2 cut(s) 337, 656
Hpy166II GTNNAC 2 cut(s) 235, 928
Hpy188I TCNGA 3 cut(s) 44, 595, 1032
Hpy188III TCNNGA 4 cut(s) 572, 854, 956, 988
Hpy8I GTNNAC 2 cut(s) 235, 928
Hpy99I CGWCG 3 cut(s) 97, 160, 268
HpyCH4III ACNGT 3 cut(s) 97, 528, 653
HpyCH4IV ACGT 3 cut(s) 263, 1089, 1112
HpyF10VI GCNNNNNNNGC 6 cut(s) 196, 253, 293, 300, 309, 381
HpyF3I CTNAG 2 cut(s) 967, 1133
HpySE526I ACGT 3 cut(s) 263, 1089, 1112
Hsp92I GRCGYC 1 cut(s) 294
Hsp92II CATG 2 cut(s) 33, 1047
HspAI GCGC 3 cut(s) 294, 312, 375
KasI GGCGCC 1 cut(s) 293
KpnI GGTACC 1 cut(s) 91
KroI GCCGGC 1 cut(s) 377
KroNI GCCGGC 1 cut(s) 379
Kzo9I GATC 6 cut(s) 610, 614, 850, 856, 897, 973
LmnI GCTCC 2 cut(s) 204, 1099
Lsp1109I GCAGC 4 cut(s) 559, 562, 781, 818
LweI GCATC 4 cut(s) 460, 818, 925, 997
MaeII ACGT 3 cut(s) 263, 1089, 1112
MaeIII GTNAC 3 cut(s) 97, 694, 948
MalI GATC 6 cut(s) 612, 616, 852, 858, 899, 975
MbiI CCGCTC 1 cut(s) 148
MboI GATC 6 cut(s) 610, 614, 850, 856, 897, 973
MboII GAAGA 7 cut(s) 116, 119, 172, 175, 356, 499, 896
MflI RGATCY 1 cut(s) 850
MluCI AATT 7 cut(s) 45, 220, 329, 350, 732, 997, 1141
Mly113I GGCGCC 1 cut(s) 294
MlyI GAGTC 2 cut(s) 146, 240
MmeI TCCRAC 1 cut(s) 14
MnlI CCTC 7 cut(s) 218, 225, 331, 382, 438, 497, 868
MreI CGCCGGCG 1 cut(s) 377
MroNI GCCGGC 1 cut(s) 377
MseI TTAA 5 cut(s) 17, 735, 816, 843, 1140
MspA1I CMGCKG 1 cut(s) 1096
MspI CCGG 4 cut(s) 238, 297, 378, 790
MspR9I CCNGG 6 cut(s) 64, 537, 791, 909, 932, 1104
MvaI CCWGG 5 cut(s) 64, 537, 909, 932, 1104
MwoI GCNNNNNNNGC 6 cut(s) 196, 253, 293, 300, 309, 381
NaeI GCCGGC 1 cut(s) 379
NarI GGCGCC 1 cut(s) 294
NciI CCSGG 1 cut(s) 791
NdeII GATC 6 cut(s) 610, 614, 850, 856, 897, 973
NgoMIV GCCGGC 1 cut(s) 377
NlaIII CATG 2 cut(s) 33, 1047
NlaIV GGNNCC 7 cut(s) 61, 89, 130, 295, 449, 1022, 1101
NmeAIII GCCGAG 1 cut(s) 254
NmuCI GTSAC 2 cut(s) 97, 694
NspI RCATGY 1 cut(s) 1047
PaeI GCATGC 1 cut(s) 1047
PasI CCCWGGG 1 cut(s) 63
PcsI WCGNNNNNNNCGW 2 cut(s) 260, 921
PdiI GCCGGC 1 cut(s) 379
PfeI GAWTC 3 cut(s) 590, 865, 912
PflMI CCANNNNNTGG 2 cut(s) 500, 530
PfoI TCCNGGA 1 cut(s) 907
PinAI ACCGGT 1 cut(s) 237
PkrI GCNGC 6 cut(s) 293, 383, 549, 552, 796, 833
PleI GAGTC 2 cut(s) 146, 239
PluTI GGCGCC 1 cut(s) 297
PpsI GAGTC 2 cut(s) 146, 239
Ppu21I YACGTR 1 cut(s) 1113
PpuMI RGGWCCY 1 cut(s) 448
PshBI ATTAAT 1 cut(s) 1140
Psp5II RGGWCCY 1 cut(s) 448
Psp6I CCWGG 5 cut(s) 62, 535, 907, 930, 1102
PspGI CCWGG 5 cut(s) 62, 535, 907, 930, 1102
PspN4I GGNNCC 7 cut(s) 61, 89, 130, 295, 449, 1022, 1101
PspPI GGNCC 5 cut(s) 59, 448, 533, 539, 579
PspPPI RGGWCCY 1 cut(s) 448
PstI CTGCAG 1 cut(s) 322
PstNI CAGNNNCTG 1 cut(s) 1010
PsuI RGATCY 1 cut(s) 850
PvuII CAGCTG 1 cut(s) 1096
RsaI GTAC 4 cut(s) 89, 689, 801, 1092
RsaNI GTAC 4 cut(s) 88, 688, 800, 1091
SaqAI TTAA 5 cut(s) 17, 735, 816, 843, 1140
SatI GCNGC 6 cut(s) 292, 382, 548, 551, 795, 832
Sau3AI GATC 6 cut(s) 610, 614, 850, 856, 897, 973
Sau96I GGNCC 5 cut(s) 59, 448, 533, 539, 579
SchI GAGTC 2 cut(s) 146, 240
ScrFI CCNGG 6 cut(s) 64, 537, 791, 909, 932, 1104
SfaNI GCATC 4 cut(s) 460, 818, 925, 997
SfcI CTRYAG 1 cut(s) 318
SfoI GGCGCC 1 cut(s) 295
SgrAI CRCCGGYG 1 cut(s) 377
SinI GGWCC 4 cut(s) 59, 448, 533, 579
SphI GCATGC 1 cut(s) 1047
Sse9I AATT 7 cut(s) 45, 220, 329, 350, 732, 997, 1141
SsiI CCGC 9 cut(s) 73, 146, 226, 291, 381, 392, 411, 473, 771
SspDI GGCGCC 1 cut(s) 293
StyD4I CCNGG 6 cut(s) 62, 535, 789, 907, 930, 1102
StyI CCWWGG 1 cut(s) 357
TaaI ACNGT 3 cut(s) 97, 528, 653
TaiI ACGT 3 cut(s) 266, 1092, 1115
TaqI TCGA 4 cut(s) 150, 155, 463, 613
TasI AATT 7 cut(s) 45, 220, 329, 350, 732, 997, 1141
TatI WGTACW 2 cut(s) 687, 799
TauI GCSGC 2 cut(s) 294, 384
TfiI GAWTC 3 cut(s) 590, 865, 912
Tru1I TTAA 5 cut(s) 17, 735, 816, 843, 1140
Tru9I TTAA 5 cut(s) 17, 735, 816, 843, 1140
TscAI CASTG 3 cut(s) 391, 505, 876
TseFI GTSAC 2 cut(s) 97, 694
TseI GCWGC 4 cut(s) 547, 550, 794, 831
Tsp45I GTSAC 2 cut(s) 97, 694
TspDTI ATGAA 3 cut(s) 17, 18, 750
TspGWI ACGGA 3 cut(s) 262, 570, 571
TspRI CASTG 3 cut(s) 391, 505, 876
Van91I CCANNNNNTGG 2 cut(s) 500, 530
VpaK11BI GGWCC 4 cut(s) 59, 448, 533, 579
VspI ATTAAT 1 cut(s) 1140
XapI RAATTY 2 cut(s) 45, 329
XceI RCATGY 1 cut(s) 1047
XcmI CCANNNNNNNNNTGG 1 cut(s) 868
XmiI GTMKAC 1 cut(s) 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.