Rh6BG056500

Belongs to the glucose-6-phosphate 1-epimerase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
9063078 .. 9063343
266 bp
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UTR
Exon/CDS
Intron
Rh6BG056500.1

Sequence Viewer

Length: 171 bp
ATGGTCAGTTCATACAAAGAGATTGCTACCTCTGGAGTGAAGGTTACAGAAGGCGAAGGAAGCTTACTCAAGGTCATTTTGACTGGTTCCAATGGCAGATTTGCGTCTGCAAATGAAAAGTTGATGTTGGTGTTGCTTTACCTCCGAGAAGGACCTCCGCGGCCGAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

56

Amino Acids

6.0

Weight (kDa)

9.3

Isoelectric Point (pI)

22.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 160
AciI CCGC 2 cut(s) 158, 160
AcoI YGGCCR 1 cut(s) 161
AluBI AGCT 2 cut(s) 63, 168
AluI AGCT 2 cut(s) 63, 168
AoxI GGCC 1 cut(s) 161
AspS9I GGNCC 1 cut(s) 152
AvaII GGWCC 1 cut(s) 152
BarI GAAGNNNNNNTAC 2 cut(s) 48, 80
BfaI CTAG 1 cut(s) 169
BisI GCNGC 1 cut(s) 161
BlsI GCNGC 1 cut(s) 162
Bme18I GGWCC 1 cut(s) 152
BmgT120I GGNCC 1 cut(s) 152
BmiI GGNNCC 1 cut(s) 88
BpmI CTGGAG 1 cut(s) 54
BpuEI CTTGAG 1 cut(s) 53
BsaJI CCNNGG 1 cut(s) 158
BsaXI ACNNNNNCTCC 2 cut(s) 27, 57
Bse1I ACTGG 1 cut(s) 88
BseDI CCNNGG 1 cut(s) 158
BseNI ACTGG 1 cut(s) 88
BseX3I CGGCCG 1 cut(s) 161
Bsh1236I CGCG 1 cut(s) 160
Bsh1285I CGRYCG 1 cut(s) 164
BshFI GGCC 1 cut(s) 163
BsiEI CGRYCG 1 cut(s) 164
BsnI GGCC 1 cut(s) 163
BspACI CCGC 2 cut(s) 158, 160
BspANI GGCC 1 cut(s) 163
BspFNI CGCG 1 cut(s) 160
BspLI GGNNCC 1 cut(s) 88
BsrI ACTGG 1 cut(s) 88
BssECI CCNNGG 1 cut(s) 158
BstDSI CCRYGG 1 cut(s) 158
BstFNI CGCG 1 cut(s) 160
BstMCI CGRYCG 1 cut(s) 164
BstMWI GCNNNNNNNGC 1 cut(s) 60
BstUI CGCG 1 cut(s) 160
BstZI CGGCCG 1 cut(s) 161
BsuRI GGCC 1 cut(s) 163
BtgI CCRYGG 1 cut(s) 158
Cfr13I GGNCC 1 cut(s) 152
Cfr42I CCGCGG 1 cut(s) 161
CseI GACGC 1 cut(s) 93
CviJI RGCY 3 cut(s) 63, 163, 168
CviKI_1 RGCY 3 cut(s) 63, 163, 168
EaeI YGGCCR 1 cut(s) 161
EagI CGGCCG 1 cut(s) 161
EclXI CGGCCG 1 cut(s) 161
Eco47I GGWCC 1 cut(s) 152
Eco52I CGGCCG 1 cut(s) 161
EcoO109I RGGNCCY 1 cut(s) 152
FaiI YATR 1 cut(s) 13
Fnu4HI GCNGC 1 cut(s) 161
Fsp4HI GCNGC 1 cut(s) 161
FspBI CTAG 1 cut(s) 169
GluI GCNGC 1 cut(s) 161
GsuI CTGGAG 1 cut(s) 54
HaeIII GGCC 1 cut(s) 163
HgaI GACGC 1 cut(s) 93
HindIII AAGCTT 1 cut(s) 61
Hpy188I TCNGA 1 cut(s) 146
Hpy188III TCNNGA 1 cut(s) 33
HpyAV CCTTC 4 cut(s) 34, 44, 50, 143
HpyCH4V TGCA 1 cut(s) 110
HpyF10VI GCNNNNNNNGC 1 cut(s) 60
KspI CCGCGG 1 cut(s) 161
LpnPI CCDG 2 cut(s) 18, 69
MaeI CTAG 1 cut(s) 169
MaeIII GTNAC 1 cut(s) 43
MnlI CCTC 3 cut(s) 40, 152, 165
MspA1I CMGCKG 1 cut(s) 160
MvnI CGCG 1 cut(s) 160
MwoI GCNNNNNNNGC 1 cut(s) 60
NlaIV GGNNCC 1 cut(s) 88
PkrI GCNGC 1 cut(s) 162
PpuMI RGGWCCY 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 152
PspN4I GGNNCC 1 cut(s) 88
PspPI GGNCC 1 cut(s) 152
PspPPI RGGWCCY 1 cut(s) 152
SacII CCGCGG 1 cut(s) 161
SatI GCNGC 1 cut(s) 161
Sau96I GGNCC 1 cut(s) 152
SetI ASST 7 cut(s) 32, 45, 65, 75, 144, 157, 170
Sfr303I CCGCGG 1 cut(s) 161
SgeI CNNG 4 cut(s) 45, 82, 96, 158
SgrBI CCGCGG 1 cut(s) 161
SinI GGWCC 1 cut(s) 152
SmlI CTYRAG 1 cut(s) 68
SmoI CTYRAG 1 cut(s) 68
SsiI CCGC 2 cut(s) 158, 160
SspMI CTAG 1 cut(s) 169
TauI GCSGC 1 cut(s) 163
TspDTI ATGAA 1 cut(s) 129
VpaK11BI GGWCC 1 cut(s) 152
XspI CTAG 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.