Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003986

Physical Location & Seq

Genomic Coordinates Reverse (-)

17281695 .. 17284487

Gene Structure 2793 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G171200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 861 bp

ATGGCGGAACCAGTAGTGGACGCGCAGTACCTCAAGGAAGTCGAGAAGGCTCGTCGGGACCTTCGCGCTCTCATCTCCGTCAGGAACTGCGCTCCTATCATGGTTCGATTGGCGTGGCATGATGCTGGGACATACAATGCTGAAACGAAAACCGGTGGCGCTAATGGCTCCATCAGGAATGAGCATGAGCTAAACCATGGCGCAAATAGTGGTTTGAAAATTGCTGTTAATTTTTGTGAGGAAGTGAAAGCCAAGTATCAGAAGATCACATATGCCGACCTCTACCAGCTTGCTGGGGTTGTTGCTGTGGAGGTCACTGGTGGCCCTACTATTGAGTTTGTTCCTGGTAGAAAGGATTCACTGGAGTCTCCGGAAGAAGGACGGCTTCCAGATGCCAAACAAGGTGCATCACATTTGAAGGACATCTTTTATCGCATGGGTCTGTCTGATAAAGACATTGTGGCATTGTCAGGAGCCCACACATTGGGTAGAGCACATCCAGAAAGGTCAGGCTTTGATGGCCCTTGGACGAATGAGCCTTTGAAGTTCGACAATTCATACTTTGTTGAGCTACTGAAGGGGGAATCAGAGGGGCTGTTGAAACTTCGCACAGACAAGGCTTTATTGGACGATCCTGAGTTCCGCCGCTATGTTGAGCTTTATGCAAAGGATGAGGATGCATTCTTCAAAGACTACGCAGTGTCACACAAGAAACTATCAGAGCTAGGCTTTGCTCCATCGTCTAGTGTCAAGGAAGCTGTAAAGACAAGTACTTTGGTGGCACAAAGTGCTGTGGGAGTTGCCGTTGCTGCAGCTGTTGTGATCCTGAGTTACTTATACGAAGTTCGTAAAAAAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005777 GO:0005778 GO:0005911 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009941 GO:0009987 GO:0010033 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016688 GO:0016999 GO:0017001 GO:0017144 GO:0030054 GO:0031090 GO:0031903 GO:0031967 GO:0031975 GO:0033554 GO:0034599 GO:0042221 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0072593 GO:0097237 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

287

Amino Acids

31.47

Weight (kDa)

6.21

Isoelectric Point (pI)

31.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35000
fragaria_vesca	FvH4_1g11491 FvH4_2g01310
malus_domestica	MD05G1120800.v1.1 MD15G1242900.v1.1
prunus_persica	Prupe.7G171200_v2.0.a1 Prupe.8G164400_v2.0.a1 Prupe.8G164400_v2.0.a1
pyrus_communis	pycom05g11470 pycom10g10600
rosa_chinensis	RchiOBHm_Chr2g0099101 RchiOBHm_Chr6g0252051 RchiOBHm_Chr6g0252201
rosa_laevigata	RLG00000015403 RLG00000016848
rosa_multiflora	Rmu_ssc0000165.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143440 Rroxscaffold_7G00216250
rosa_rugosa	Rorug02G0076700 Rorug05G0506000.1
rosa_samantha	Rh2AG125800 Rh2BG129100 Rh2CG130100 Rh2DG130500 Rh6AG019900 Rh6BG015300 Rh6CG011600 Rh6CG012300 Rh6DG013000 Rh6DG013600
rosa_wichuraiana	Rw2G009690 Rw6G000090 Rw6G001630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	484
AccII	CGCG	2 cut(s)	23, 66
AccIII	TCCGGA	1 cut(s)	370
AciI	CCGC	3 cut(s)	5, 643, 646
AclWI	GGATC	2 cut(s)	626, 817
AcuI	CTGAAG	1 cut(s)	596
AdeI	CACNNNGTG	1 cut(s)	788
AfaI	GTAC	2 cut(s)	29, 772
AfiI	CCNNNNNNNGG	2 cut(s)	377, 484
AgeI	ACCGGT	1 cut(s)	152
AgsI	TTSAA	5 cut(s)	217, 418, 544, 601, 688
AjnI	CCWGG	1 cut(s)	343
AluBI	AGCT	7 cut(s)	190, 289, 571, 658, 724, 758, 815
AluI	AGCT	7 cut(s)	190, 289, 571, 658, 724, 758, 815
Alw21I	GWGCWC	1 cut(s)	496
Alw26I	GTCTC	1 cut(s)	372
AlwI	GGATC	2 cut(s)	626, 817
AlwNI	CAGNNNCTG	1 cut(s)	87
Aor13HI	TCCGGA	1 cut(s)	370
AoxI	GGCC	2 cut(s)	322, 520
ApeKI	GCWGC	2 cut(s)	809, 812
ArsI	GACNNNNNNTTYG	2 cut(s)	757, 789
AsiGI	ACCGGT	1 cut(s)	152
Asp700I	GAANNNNTTC	1 cut(s)	355
AspLEI	GCGC	5 cut(s)	25, 68, 92, 161, 203
AspS9I	GGNCC	3 cut(s)	58, 323, 521
AvaII	GGWCC	1 cut(s)	58
BanII	GRGCYC	1 cut(s)	478
Bbv12I	GWGCWC	1 cut(s)	496
BbvI	GCAGC	2 cut(s)	796, 824
BccI	CCATC	3 cut(s)	179, 512, 745
BceAI	ACGGC	2 cut(s)	398, 788
BciT130I	CCWGG	1 cut(s)	345
BcoDI	GTCTC	1 cut(s)	372
BfaI	CTAG	3 cut(s)	725, 744, 859
BfmI	CTRYAG	1 cut(s)	810
BfoI	RGCGCY	1 cut(s)	162
BisI	GCNGC	3 cut(s)	646, 810, 813
BlsI	GCNGC	3 cut(s)	647, 811, 814
BmcAI	AGTACT	1 cut(s)	772
Bme1390I	CCNGG	1 cut(s)	345
Bme18I	GGWCC	1 cut(s)	58
BmgT120I	GGNCC	3 cut(s)	58, 323, 521
BmiI	GGNNCC	4 cut(s)	9, 59, 169, 475
BmrFI	CCNGG	1 cut(s)	345
BmsI	GCATC	4 cut(s)	112, 382, 416, 667
BpmI	CTGGAG	1 cut(s)	383
BpuEI	CTTGAG	1 cut(s)	17
BsaJI	CCNNGG	2 cut(s)	196, 524
BsaWI	WCCGGW	2 cut(s)	152, 370
BsaXI	ACNNNNNCTCC	2 cut(s)	789, 819
Bsc4I	CCNNNNNNNGG	2 cut(s)	377, 484
Bse118I	RCCGGY	1 cut(s)	152
Bse1I	ACTGG	3 cut(s)	11, 322, 366
BseAI	TCCGGA	1 cut(s)	370
BseBI	CCWGG	1 cut(s)	345
BseDI	CCNNGG	2 cut(s)	196, 524
BseGI	GGATG	3 cut(s)	496, 676, 682
BseLI	CCNNNNNNNGG	2 cut(s)	377, 484
BseMII	CTCAG	2 cut(s)	627, 818
BseNI	ACTGG	3 cut(s)	11, 322, 366
BseXI	GCAGC	2 cut(s)	796, 824
BseYI	CCCAGC	2 cut(s)	125, 293
Bsh1236I	CGCG	2 cut(s)	23, 66
BshFI	GGCC	2 cut(s)	324, 522
BshTI	ACCGGT	1 cut(s)	152
BsiHKAI	GWGCWC	1 cut(s)	496
BsiSI	CCGG	2 cut(s)	153, 371
BslFI	GGGAC	2 cut(s)	71, 142
BslI	CCNNNNNNNGG	2 cut(s)	377, 484
BsmAI	GTCTC	1 cut(s)	372
BsmFI	GGGAC	2 cut(s)	71, 142
BsmI	GAATGC	1 cut(s)	680
BsnI	GGCC	2 cut(s)	324, 522
Bsp1286I	GDGCHC	2 cut(s)	478, 496
Bsp13I	TCCGGA	1 cut(s)	370
Bsp143I	GATC	3 cut(s)	264, 631, 822
Bsp19I	CCATGG	1 cut(s)	196
BspACI	CCGC	3 cut(s)	5, 643, 646
BspANI	GGCC	2 cut(s)	324, 522
BspCNI	CTCAG	2 cut(s)	628, 819
BspEI	TCCGGA	1 cut(s)	370
BspFNI	CGCG	2 cut(s)	23, 66
BspLI	GGNNCC	4 cut(s)	9, 59, 169, 475
BspMAI	CTGCAG	1 cut(s)	814
BspPI	GGATC	2 cut(s)	626, 817
BsrFI	RCCGGY	1 cut(s)	152
BsrI	ACTGG	3 cut(s)	11, 322, 366
BssAI	RCCGGY	1 cut(s)	152
BssECI	CCNNGG	2 cut(s)	196, 524
BssMI	GATC	3 cut(s)	264, 631, 822
BssT1I	CCWWGG	2 cut(s)	196, 524
Bst2UI	CCWGG	1 cut(s)	345
BstAPI	GCANNNNNTGC	1 cut(s)	788
BstC8I	GCNNGC	1 cut(s)	291
BstDEI	CTNAG	2 cut(s)	636, 827
BstDSI	CCRYGG	1 cut(s)	196
BstF5I	GGATG	3 cut(s)	496, 676, 682
BstFNI	CGCG	2 cut(s)	23, 66
BstH2I	RGCGCY	1 cut(s)	162
BstHHI	GCGC	5 cut(s)	25, 68, 92, 161, 203
BstKTI	GATC	3 cut(s)	267, 634, 825
BstMAI	GTCTC	1 cut(s)	372
BstMBI	GATC	3 cut(s)	264, 631, 822
BstMWI	GCNNNNNNNGC	4 cut(s)	165, 519, 788, 809
BstNI	CCWGG	1 cut(s)	345
BstSCI	CCNGG	1 cut(s)	343
BstSFI	CTRYAG	1 cut(s)	810
BstUI	CGCG	2 cut(s)	23, 66
BstV1I	GCAGC	2 cut(s)	796, 824
BstXI	CCANNNNNNTGG	1 cut(s)	293
BsuRI	GGCC	2 cut(s)	324, 522
BtgI	CCRYGG	1 cut(s)	196
BtsCI	GGATG	3 cut(s)	496, 676, 682
BtsI	GCAGTG	1 cut(s)	705
BtsIMutI	CAGTG	3 cut(s)	315, 359, 705
Cac8I	GCNNGC	1 cut(s)	291
CaiI	CAGNNNCTG	1 cut(s)	87
CfoI	GCGC	5 cut(s)	25, 68, 92, 161, 203
Cfr10I	RCCGGY	1 cut(s)	152
Cfr13I	GGNCC	3 cut(s)	58, 323, 521
CseI	GACGC	1 cut(s)	29
Csp6I	GTAC	2 cut(s)	28, 771
CspAI	ACCGGT	1 cut(s)	152
CviAII	CATG	5 cut(s)	100, 119, 185, 197, 436
CviQI	GTAC	2 cut(s)	28, 771
DdeI	CTNAG	2 cut(s)	636, 827
DpnI	GATC	3 cut(s)	266, 633, 824
DpnII	GATC	3 cut(s)	264, 631, 822
DraIII	CACNNNGTG	1 cut(s)	788
EciI	GGCGGA	2 cut(s)	20, 632
Eco130I	CCWWGG	2 cut(s)	196, 524
Eco24I	GRGCYC	1 cut(s)	478
Eco47I	GGWCC	1 cut(s)	58
Eco57I	CTGAAG	1 cut(s)	596
EcoO109I	RGGNCCY	1 cut(s)	58
EcoRII	CCWGG	1 cut(s)	343
EcoT14I	CCWWGG	2 cut(s)	196, 524
EcoT22I	ATGCAT	1 cut(s)	682
EcoT38I	GRGCYC	1 cut(s)	478
ErhI	CCWWGG	2 cut(s)	196, 524
FaeI	CATG	5 cut(s)	103, 122, 188, 200, 439
FalI	AAGNNNNNCTT	4 cut(s)	369, 401, 410, 442
FaqI	GGGAC	2 cut(s)	71, 142
FatI	CATG	5 cut(s)	99, 118, 184, 196, 435
FauNDI	CATATG	1 cut(s)	271
Fnu4HI	GCNGC	3 cut(s)	646, 810, 813
FokI	GGATG	3 cut(s)	483, 683, 689
FriOI	GRGCYC	1 cut(s)	478
Fsp4HI	GCNGC	3 cut(s)	646, 810, 813
FspBI	CTAG	3 cut(s)	725, 744, 859
GlaI	GCGC	5 cut(s)	24, 67, 91, 160, 202
GluI	GCNGC	3 cut(s)	646, 810, 813
GsaI	CCCAGC	2 cut(s)	129, 297
GsuI	CTGGAG	1 cut(s)	383
HaeII	RGCGCY	1 cut(s)	162
HaeIII	GGCC	2 cut(s)	324, 522
HapII	CCGG	2 cut(s)	153, 371
HgaI	GACGC	1 cut(s)	29
HhaI	GCGC	5 cut(s)	25, 68, 92, 161, 203
Hin1II	CATG	5 cut(s)	103, 122, 188, 200, 439
Hin6I	GCGC	5 cut(s)	23, 66, 90, 159, 201
HinP1I	GCGC	5 cut(s)	23, 66, 90, 159, 201
HinfI	GANTC	3 cut(s)	356, 365, 584
HpaII	CCGG	2 cut(s)	153, 371
Hpy166II	GTNNAC	1 cut(s)	19
Hpy188I	TCNGA	4 cut(s)	261, 448, 589, 721
Hpy8I	GTNNAC	1 cut(s)	19
Hpy99I	CGWCG	1 cut(s)	57
HpyAV	CCTTC	5 cut(s)	40, 71, 371, 412, 571
HpyCH4V	TGCA	4 cut(s)	407, 665, 680, 812
HpyF10VI	GCNNNNNNNGC	4 cut(s)	165, 519, 788, 809
HpyF3I	CTNAG	2 cut(s)	636, 827
Hsp92II	CATG	5 cut(s)	103, 122, 188, 200, 439
HspAI	GCGC	5 cut(s)	23, 66, 90, 159, 201
Kpn2I	TCCGGA	1 cut(s)	370
Kzo9I	GATC	3 cut(s)	264, 631, 822
LmnI	GCTCC	4 cut(s)	97, 173, 473, 739
Lsp1109I	GCAGC	2 cut(s)	796, 824
LweI	GCATC	4 cut(s)	112, 382, 416, 667
MaeI	CTAG	3 cut(s)	725, 744, 859
MaeIII	GTNAC	3 cut(s)	313, 702, 830
MalI	GATC	3 cut(s)	266, 633, 824
MboI	GATC	3 cut(s)	264, 631, 822
MboII	GAAGA	3 cut(s)	274, 386, 676
MhlI	GDGCHC	2 cut(s)	478, 496
MluCI	AATT	3 cut(s)	219, 229, 553
MlyI	GAGTC	1 cut(s)	374
MnlI	CCTC	6 cut(s)	41, 232, 290, 304, 583, 667
Mph1103I	ATGCAT	1 cut(s)	682
MroI	TCCGGA	1 cut(s)	370
MroXI	GAANNNNTTC	1 cut(s)	355
MseI	TTAA	1 cut(s)	228
MspA1I	CMGCKG	1 cut(s)	815
MspI	CCGG	2 cut(s)	153, 371
MspR9I	CCNGG	1 cut(s)	345
Mva1269I	GAATGC	1 cut(s)	680
MvaI	CCWGG	1 cut(s)	345
MvnI	CGCG	2 cut(s)	23, 66
MwoI	GCNNNNNNNGC	4 cut(s)	165, 519, 788, 809
NcoI	CCATGG	1 cut(s)	196
NdeI	CATATG	1 cut(s)	271
NdeII	GATC	3 cut(s)	264, 631, 822
NlaIII	CATG	5 cut(s)	103, 122, 188, 200, 439
NlaIV	GGNNCC	4 cut(s)	9, 59, 169, 475
NmuCI	GTSAC	2 cut(s)	313, 702
NsiI	ATGCAT	1 cut(s)	682
PctI	GAATGC	1 cut(s)	680
PdmI	GAANNNNTTC	1 cut(s)	355
PfeI	GAWTC	2 cut(s)	356, 584
PflMI	CCANNNNNTGG	1 cut(s)	484
PinAI	ACCGGT	1 cut(s)	152
PkrI	GCNGC	3 cut(s)	647, 811, 814
PleI	GAGTC	1 cut(s)	373
PpsI	GAGTC	1 cut(s)	373
PpuMI	RGGWCCY	1 cut(s)	58
Psp5II	RGGWCCY	1 cut(s)	58
Psp6I	CCWGG	1 cut(s)	343
PspFI	CCCAGC	2 cut(s)	125, 293
PspGI	CCWGG	1 cut(s)	343
PspN4I	GGNNCC	4 cut(s)	9, 59, 169, 475
PspPI	GGNCC	3 cut(s)	58, 323, 521
PspPPI	RGGWCCY	1 cut(s)	58
PstI	CTGCAG	1 cut(s)	814
PstNI	CAGNNNCTG	1 cut(s)	87
PvuII	CAGCTG	1 cut(s)	815
RsaI	GTAC	2 cut(s)	29, 772
RsaNI	GTAC	2 cut(s)	28, 771
SaqAI	TTAA	1 cut(s)	228
SatI	GCNGC	3 cut(s)	646, 810, 813
Sau3AI	GATC	3 cut(s)	264, 631, 822
Sau96I	GGNCC	3 cut(s)	58, 323, 521
ScaI	AGTACT	1 cut(s)	772
SchI	GAGTC	1 cut(s)	374
ScrFI	CCNGG	1 cut(s)	345
SduI	GDGCHC	2 cut(s)	478, 496
SfaNI	GCATC	4 cut(s)	112, 382, 416, 667
SfcI	CTRYAG	1 cut(s)	810
SinI	GGWCC	1 cut(s)	58
SmlI	CTYRAG	1 cut(s)	32
SmoI	CTYRAG	1 cut(s)	32
Sse9I	AATT	3 cut(s)	219, 229, 553
SsiI	CCGC	3 cut(s)	5, 643, 646
SspMI	CTAG	3 cut(s)	725, 744, 859
StyD4I	CCNGG	1 cut(s)	343
StyI	CCWWGG	2 cut(s)	196, 524
TaqI	TCGA	3 cut(s)	42, 106, 549
TasI	AATT	3 cut(s)	219, 229, 553
TatI	WGTACW	1 cut(s)	770
TauI	GCSGC	1 cut(s)	648
TfiI	GAWTC	2 cut(s)	356, 584
Tru1I	TTAA	1 cut(s)	228
Tru9I	TTAA	1 cut(s)	228
TscAI	CASTG	3 cut(s)	322, 366, 705
TseFI	GTSAC	2 cut(s)	313, 702
TseI	GCWGC	2 cut(s)	809, 812
Tsp45I	GTSAC	2 cut(s)	313, 702
TspDTI	ATGAA	1 cut(s)	546
TspGWI	ACGGA	1 cut(s)	67
TspRI	CASTG	3 cut(s)	322, 366, 705
Van91I	CCANNNNNTGG	1 cut(s)	484
VpaK11BI	GGWCC	1 cut(s)	58
XmnI	GAANNNNTTC	1 cut(s)	355
XspI	CTAG	3 cut(s)	725, 744, 859
ZrmI	AGTACT	1 cut(s)	772
Zsp2I	ATGCAT	1 cut(s)	682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.