Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003986

Physical Location & Seq

Genomic Coordinates Reverse (-)

17135343 .. 17140547

Gene Structure 5205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G164400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 897 bp

ATGGCGTCACCGCTCGTTGACAAAGAGTACCTCAAAGAAATCGAGAAGGCTCGCTGTGATCTCCGTGCTCTGATATACAGCAGTAGCTGTGCTCCCCTCATGCTTCGCTTGGCATGGCACGATGCTGGCACCTACGACGCCAAGACGAAGACGGGAGGGCCTAATGGGTCGATTAGGACTGAGGAAGAGTACTCTCATGGTTCTAATAATGGCTTGAAGAAGGCTGTTGATTTTTGCGAGGAAGTGAAGTCTAAGCATCCAAGGATTTCATATGCAGACCTTTACCAGCTTGCGGGTGTTGTTGCAGTTGAGCTGACTGGAGGCCCCGCCATTGATTTTTCTCCTGGCAGAAAGGATTCAAAAATCTCTCCTAAGGAAGGACGACTTCCAGATGCTAAACGAGGTGCACCACATCTGAGGGAAAAATTCTACAGAATGGGGTTGTCTGACAAGGATATTGTTGCACTATCTGGGGGCCATACACTGGGAAGGGCACATCTCGAGAGATCTGGTTTTGATGGTCCTTGGACTAAGGAACCTCTGCAGTTCGATAACTCATACTTTGTATGGATTGGAGGTCCTCTTCAGATGGATTGGAGGGAACTGTTAAATGGGGAATCAGAGGGGCTGTTGAAACTTCCGACAGATGCAGCTTTAGTGGAAGATCCTGAGTTCCGTAAATATGTTGATCTGTATGCGAAGGATGAAGATGCATTTTTTGGAGATTATGCCGAATCGCATAAAAAACTTTCAGAGCTTGGGTTTACTCCAATCTCCTCTTCTACTAACACAGCAAAGGACAGCACCATACTGGCACAAGGTGCAGTAGGAGTTGCAGTTGCTGCTGCTGTTGTGATCCTAGGCTACTTGTATGAAGCTAAGAAAAGACTGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005777 GO:0005778 GO:0005911 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009941 GO:0009987 GO:0010033 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016688 GO:0016999 GO:0017001 GO:0017144 GO:0030054 GO:0031090 GO:0031903 GO:0031967 GO:0031975 GO:0033554 GO:0034599 GO:0042221 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0072593 GO:0097237 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

299

Amino Acids

32.78

Weight (kDa)

6.2

Isoelectric Point (pI)

38.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35000
fragaria_vesca	FvH4_1g11491 FvH4_2g01310
malus_domestica	MD05G1120800.v1.1 MD15G1242900.v1.1
prunus_persica	Prupe.7G171200_v2.0.a1 Prupe.8G164400_v2.0.a1 Prupe.8G164400_v2.0.a1
pyrus_communis	pycom05g11470 pycom10g10600
rosa_chinensis	RchiOBHm_Chr2g0099101 RchiOBHm_Chr6g0252051 RchiOBHm_Chr6g0252201
rosa_laevigata	RLG00000015403 RLG00000016848
rosa_multiflora	Rmu_ssc0000165.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143440 Rroxscaffold_7G00216250
rosa_rugosa	Rorug02G0076700 Rorug05G0506000.1
rosa_samantha	Rh2AG125800 Rh2BG129100 Rh2CG130100 Rh2DG130500 Rh6AG019900 Rh6BG015300 Rh6CG011600 Rh6CG012300 Rh6DG013000 Rh6DG013600
rosa_wichuraiana	Rw2G009690 Rw6G000090 Rw6G001630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	128
AccB7I	CCANNNNNTGG	1 cut(s)	484
AccBSI	CCGCTC	1 cut(s)	13
AciI	CCGC	3 cut(s)	11, 293, 327
AclWI	GGATC	2 cut(s)	659, 850
AcsI	RAATTY	1 cut(s)	425
AcuI	CTGAAG	1 cut(s)	569
AcyI	GRCGYC	2 cut(s)	5, 138
AdeI	CACNNNGTG	1 cut(s)	821
AfaI	GTAC	2 cut(s)	29, 191
AfiI	CCNNNNNNNGG	3 cut(s)	292, 377, 484
AgsI	TTSAA	3 cut(s)	217, 360, 634
AjnI	CCWGG	1 cut(s)	343
AjuI	GAANNNNNNNTTGG	2 cut(s)	763, 795
AluBI	AGCT	6 cut(s)	87, 289, 313, 653, 757, 878
AluI	AGCT	6 cut(s)	87, 289, 313, 653, 757, 878
Alw21I	GWGCWC	3 cut(s)	70, 94, 409
Alw44I	GTGCAC	1 cut(s)	405
AlwI	GGATC	2 cut(s)	659, 850
AlwNI	CAGNNNCTG	2 cut(s)	87, 842
Ama87I	CYCGRG	1 cut(s)	500
AoxI	GGCC	3 cut(s)	158, 322, 475
ApaLI	GTGCAC	1 cut(s)	405
ApeKI	GCWGC	3 cut(s)	650, 842, 845
ApoI	RAATTY	1 cut(s)	425
Asp700I	GAANNNNTTC	1 cut(s)	355
AspA2I	CCTAGG	1 cut(s)	859
AspS9I	GGNCC	5 cut(s)	158, 323, 475, 521, 578
AvaI	CYCGRG	1 cut(s)	500
AvaII	GGWCC	2 cut(s)	521, 578
AvrII	CCTAGG	1 cut(s)	859
AxyI	CCTNAGG	1 cut(s)	372
BaeGI	GKGCMC	2 cut(s)	409, 496
BanI	GGYRCC	1 cut(s)	128
BbsI	GAAGAC	1 cut(s)	155
Bbv12I	GWGCWC	3 cut(s)	70, 94, 409
BbvI	GCAGC	3 cut(s)	662, 829, 832
BccI	CCATC	2 cut(s)	512, 583
BciT130I	CCWGG	1 cut(s)	345
BfaI	CTAG	1 cut(s)	860
BfmI	CTRYAG	2 cut(s)	430, 542
BglII	AGATCT	1 cut(s)	506
BisI	GCNGC	3 cut(s)	651, 843, 846
BlnI	CCTAGG	1 cut(s)	859
BlsI	GCNGC	3 cut(s)	652, 844, 847
BmcAI	AGTACT	1 cut(s)	191
Bme1390I	CCNGG	1 cut(s)	345
Bme18I	GGWCC	2 cut(s)	521, 578
BmeT110I	CYCGRG	1 cut(s)	500
BmgT120I	GGNCC	5 cut(s)	158, 323, 475, 521, 578
BmiI	GGNNCC	4 cut(s)	130, 325, 476, 537
BmrFI	CCNGG	1 cut(s)	345
BmrI	ACTGGG	1 cut(s)	494
BmsI	GCATC	5 cut(s)	112, 265, 382, 637, 700
BmuI	ACTGGG	1 cut(s)	494
BpiI	GAAGAC	1 cut(s)	155
BpmI	CTGGAG	1 cut(s)	339
BsaHI	GRCGYC	2 cut(s)	5, 138
BsaJI	CCNNGG	3 cut(s)	260, 524, 859
BsaXI	ACNNNNNCTCC	2 cut(s)	822, 852
Bsc4I	CCNNNNNNNGG	3 cut(s)	292, 377, 484
Bse1I	ACTGG	3 cut(s)	322, 489, 816
Bse21I	CCTNAGG	1 cut(s)	372
BseBI	CCWGG	1 cut(s)	345
BseDI	CCNNGG	3 cut(s)	260, 524, 859
BseGI	GGATG	2 cut(s)	256, 709
BseLI	CCNNNNNNNGG	3 cut(s)	292, 377, 484
BseMII	CTCAG	3 cut(s)	171, 407, 660
BseNI	ACTGG	3 cut(s)	322, 489, 816
BseRI	GAGGAG	1 cut(s)	766
BseSI	GKGCMC	2 cut(s)	409, 496
BseXI	GCAGC	3 cut(s)	662, 829, 832
BsgI	GTGCAG	1 cut(s)	843
BshFI	GGCC	3 cut(s)	160, 324, 477
BshNI	GGYRCC	1 cut(s)	128
BsiHKAI	GWGCWC	3 cut(s)	70, 94, 409
BsiHKCI	CYCGRG	1 cut(s)	500
BslI	CCNNNNNNNGG	3 cut(s)	292, 377, 484
BsnI	GGCC	3 cut(s)	160, 324, 477
BsoBI	CYCGRG	1 cut(s)	500
Bsp1286I	GDGCHC	4 cut(s)	70, 94, 409, 496
Bsp143I	GATC	5 cut(s)	58, 506, 664, 688, 855
BspACI	CCGC	3 cut(s)	11, 293, 327
BspANI	GGCC	3 cut(s)	160, 324, 477
BspCNI	CTCAG	3 cut(s)	172, 408, 661
BspLI	GGNNCC	4 cut(s)	130, 325, 476, 537
BspMAI	CTGCAG	1 cut(s)	546
BspPI	GGATC	2 cut(s)	659, 850
BspT107I	GGYRCC	1 cut(s)	128
BsrBI	CCGCTC	1 cut(s)	13
BsrI	ACTGG	3 cut(s)	322, 489, 816
BssECI	CCNNGG	3 cut(s)	260, 524, 859
BssMI	GATC	5 cut(s)	58, 506, 664, 688, 855
BssNI	GRCGYC	2 cut(s)	5, 138
BssT1I	CCWWGG	3 cut(s)	260, 524, 859
Bst2UI	CCWGG	1 cut(s)	345
Bst4CI	ACNGT	1 cut(s)	606
Bst6I	CTCTTC	3 cut(s)	180, 588, 784
BstACI	GRCGYC	2 cut(s)	5, 138
BstAPI	GCANNNNNTGC	2 cut(s)	821, 842
BstC8I	GCNNGC	3 cut(s)	52, 127, 291
BstDEI	CTNAG	7 cut(s)	180, 252, 372, 416, 531, 669, 879
BstENI	CCTNNNNNAGG	1 cut(s)	375
BstF5I	GGATG	2 cut(s)	256, 709
BstKTI	GATC	5 cut(s)	61, 509, 667, 691, 858
BstMBI	GATC	5 cut(s)	58, 506, 664, 688, 855
BstMWI	GCNNNNNNNGC	2 cut(s)	821, 842
BstNI	CCWGG	1 cut(s)	345
BstSCI	CCNGG	1 cut(s)	343
BstSFI	CTRYAG	2 cut(s)	430, 542
BstSLI	GKGCMC	2 cut(s)	409, 496
BstV1I	GCAGC	3 cut(s)	662, 829, 832
BstV2I	GAAGAC	1 cut(s)	155
BstX2I	RGATCY	2 cut(s)	506, 664
BstYI	RGATCY	2 cut(s)	506, 664
Bsu36I	CCTNAGG	1 cut(s)	372
BsuRI	GGCC	3 cut(s)	160, 324, 477
BtsCI	GGATG	2 cut(s)	256, 709
BtsIMutI	CAGTG	1 cut(s)	482
Cac8I	GCNNGC	3 cut(s)	52, 127, 291
CaiI	CAGNNNCTG	2 cut(s)	87, 842
Cfr13I	GGNCC	5 cut(s)	158, 323, 475, 521, 578
CseI	GACGC	1 cut(s)	146
Csp6I	GTAC	2 cut(s)	28, 190
CviAII	CATG	3 cut(s)	100, 114, 197
CviQI	GTAC	2 cut(s)	28, 190
DdeI	CTNAG	7 cut(s)	180, 252, 372, 416, 531, 669, 879
DpnI	GATC	5 cut(s)	60, 508, 666, 690, 857
DpnII	GATC	5 cut(s)	58, 506, 664, 688, 855
DraIII	CACNNNGTG	1 cut(s)	821
Eam1104I	CTCTTC	3 cut(s)	180, 588, 784
EarI	CTCTTC	3 cut(s)	180, 588, 784
Eco130I	CCWWGG	3 cut(s)	260, 524, 859
Eco47I	GGWCC	2 cut(s)	521, 578
Eco57I	CTGAAG	1 cut(s)	569
Eco81I	CCTNAGG	1 cut(s)	372
Eco88I	CYCGRG	1 cut(s)	500
EcoNI	CCTNNNNNAGG	1 cut(s)	375
EcoO109I	RGGNCCY	3 cut(s)	158, 323, 578
EcoRII	CCWGG	1 cut(s)	343
EcoT14I	CCWWGG	3 cut(s)	260, 524, 859
EcoT22I	ATGCAT	1 cut(s)	715
ErhI	CCWWGG	3 cut(s)	260, 524, 859
FaeI	CATG	3 cut(s)	103, 117, 200
FalI	AAGNNNNNCTT	2 cut(s)	369, 401
FatI	CATG	3 cut(s)	99, 113, 196
FauI	CCCGC	2 cut(s)	286, 334
FauNDI	CATATG	1 cut(s)	271
Fnu4HI	GCNGC	3 cut(s)	651, 843, 846
FokI	GGATG	2 cut(s)	243, 716
Fsp4HI	GCNGC	3 cut(s)	651, 843, 846
FspBI	CTAG	1 cut(s)	860
GluI	GCNGC	3 cut(s)	651, 843, 846
GsuI	CTGGAG	1 cut(s)	339
HaeIII	GGCC	3 cut(s)	160, 324, 477
HgaI	GACGC	1 cut(s)	146
Hin1I	GRCGYC	2 cut(s)	5, 138
Hin1II	CATG	3 cut(s)	103, 117, 200
HincII	GTYRAC	1 cut(s)	19
HindII	GTYRAC	1 cut(s)	19
HinfI	GANTC	3 cut(s)	356, 617, 734
Hpy166II	GTNNAC	3 cut(s)	19, 407, 765
Hpy188I	TCNGA	7 cut(s)	72, 417, 448, 588, 622, 642, 754
Hpy188III	TCNNGA	5 cut(s)	43, 389, 500, 502, 668
Hpy8I	GTNNAC	3 cut(s)	19, 407, 765
Hpy99I	CGWCG	1 cut(s)	140
HpyAV	CCTTC	5 cut(s)	40, 214, 371, 483, 694
HpyCH4III	ACNGT	1 cut(s)	606
HpyCH4V	TGCA	9 cut(s)	275, 305, 407, 464, 544, 650, 713, 824, 836
HpyF10VI	GCNNNNNNNGC	2 cut(s)	821, 842
HpyF3I	CTNAG	7 cut(s)	180, 252, 372, 416, 531, 669, 879
Hsp92I	GRCGYC	2 cut(s)	5, 138
Hsp92II	CATG	3 cut(s)	103, 117, 200
Kzo9I	GATC	5 cut(s)	58, 506, 664, 688, 855
LmnI	GCTCC	1 cut(s)	97
Lsp1109I	GCAGC	3 cut(s)	662, 829, 832
LweI	GCATC	5 cut(s)	112, 265, 382, 637, 700
MaeI	CTAG	1 cut(s)	860
MaeIII	GTNAC	1 cut(s)	6
MalI	GATC	5 cut(s)	60, 508, 666, 690, 857
MbiI	CCGCTC	1 cut(s)	13
MboI	GATC	5 cut(s)	58, 506, 664, 688, 855
MboII	GAAGA	7 cut(s)	160, 197, 229, 575, 674, 719, 771
MflI	RGATCY	2 cut(s)	506, 664
MhlI	GDGCHC	4 cut(s)	70, 94, 409, 496
MluCI	AATT	1 cut(s)	425
MmeI	TCCRAC	1 cut(s)	665
Mph1103I	ATGCAT	1 cut(s)	715
MroXI	GAANNNNTTC	1 cut(s)	355
MseI	TTAA	1 cut(s)	608
MspR9I	CCNGG	1 cut(s)	345
MvaI	CCWGG	1 cut(s)	345
MwoI	GCNNNNNNNGC	2 cut(s)	821, 842
NdeI	CATATG	1 cut(s)	271
NdeII	GATC	5 cut(s)	58, 506, 664, 688, 855
NlaIII	CATG	3 cut(s)	103, 117, 200
NlaIV	GGNNCC	4 cut(s)	130, 325, 476, 537
NmuCI	GTSAC	1 cut(s)	6
NsiI	ATGCAT	1 cut(s)	715
PaeR7I	CTCGAG	1 cut(s)	500
PdmI	GAANNNNTTC	1 cut(s)	355
PfeI	GAWTC	3 cut(s)	356, 617, 734
PflMI	CCANNNNNTGG	1 cut(s)	484
PkrI	GCNGC	3 cut(s)	652, 844, 847
PpuMI	RGGWCCY	1 cut(s)	578
Psp5II	RGGWCCY	1 cut(s)	578
Psp6I	CCWGG	1 cut(s)	343
PspGI	CCWGG	1 cut(s)	343
PspN4I	GGNNCC	4 cut(s)	130, 325, 476, 537
PspPI	GGNCC	5 cut(s)	158, 323, 475, 521, 578
PspPPI	RGGWCCY	1 cut(s)	578
PstI	CTGCAG	1 cut(s)	546
PstNI	CAGNNNCTG	2 cut(s)	87, 842
PsuI	RGATCY	2 cut(s)	506, 664
RsaI	GTAC	2 cut(s)	29, 191
RsaNI	GTAC	2 cut(s)	28, 190
SaqAI	TTAA	1 cut(s)	608
SatI	GCNGC	3 cut(s)	651, 843, 846
Sau3AI	GATC	5 cut(s)	58, 506, 664, 688, 855
Sau96I	GGNCC	5 cut(s)	158, 323, 475, 521, 578
ScaI	AGTACT	1 cut(s)	191
ScrFI	CCNGG	1 cut(s)	345
SduI	GDGCHC	4 cut(s)	70, 94, 409, 496
SfaNI	GCATC	5 cut(s)	112, 265, 382, 637, 700
SfcI	CTRYAG	2 cut(s)	430, 542
Sfr274I	CTCGAG	1 cut(s)	500
SinI	GGWCC	2 cut(s)	521, 578
SlaI	CTCGAG	1 cut(s)	500
SmlI	CTYRAG	1 cut(s)	500
SmoI	CTYRAG	1 cut(s)	500
Sse9I	AATT	1 cut(s)	425
SsiI	CCGC	3 cut(s)	11, 293, 327
SspMI	CTAG	1 cut(s)	860
StyD4I	CCNGG	1 cut(s)	343
StyI	CCWWGG	3 cut(s)	260, 524, 859
TaaI	ACNGT	1 cut(s)	606
TaqI	TCGA	4 cut(s)	42, 170, 501, 549
TasI	AATT	1 cut(s)	425
TatI	WGTACW	1 cut(s)	189
TfiI	GAWTC	3 cut(s)	356, 617, 734
Tru1I	TTAA	1 cut(s)	608
Tru9I	TTAA	1 cut(s)	608
TscAI	CASTG	1 cut(s)	489
TseFI	GTSAC	1 cut(s)	6
TseI	GCWGC	3 cut(s)	650, 842, 845
Tsp45I	GTSAC	1 cut(s)	6
TspDTI	ATGAA	3 cut(s)	258, 720, 888
TspGWI	ACGGA	2 cut(s)	53, 665
TspRI	CASTG	1 cut(s)	489
Van91I	CCANNNNNTGG	1 cut(s)	484
VneI	GTGCAC	1 cut(s)	405
VpaK11BI	GGWCC	2 cut(s)	521, 578
XagI	CCTNNNNNAGG	1 cut(s)	375
XapI	RAATTY	1 cut(s)	425
XhoI	CTCGAG	1 cut(s)	500
XmaJI	CCTAGG	1 cut(s)	859
XmnI	GAANNNNTTC	1 cut(s)	355
XspI	CTAG	1 cut(s)	860
ZrmI	AGTACT	1 cut(s)	191
Zsp2I	ATGCAT	1 cut(s)	715

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.