Prupe.7G185600_v2.0.a1

Alpha and gamma adaptin binding protein p34

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
17986393 .. 17989161
2769 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G185600.1

Sequence Viewer

Length: 1254 bp
ATGGAAGGTCAAGTGAAGGAAGGAGACTCTCTGGAGAAGAGGCCTGGCATCTTCTTCCTCGGCTCCCCCAACGTCGGCAAGCGCACTATGCTTTCTCGATTACTGGCTTTGGATTTTGATGATGCTTCTGATTCTTCTTCATCTCAGCTCGTAGTTAATGGGTGGAATATTTCTACAAAGTACTACACAGCTGATGTTTCCGTATGGATGGCTCATCTTCATGATGAATTTTCCATTGAGACCCTCCCAATGTATGACCAGTTGCAAGCCTTGATCTTGGTCTTTGACACCACTGAGTTGTCGTCTCTTGCTGCACTTCAGAAATGGGTATCTCGAACTGATCTTCAAAAATTTGATATACTATTATGCATAGGGAACAAGGTGGATCTTGTCCCAGGTCACCCAGTTCATGCTGAATATAGAAGACGTCTGCTGAAGCTTGGAGATCCATTTGCTGATTCTGGTCCAGGGTTCACTGAGTATGGAATCTCCGAAACTGAAGGAAGTAGTTTACTGGGGGATGACGAACCATCATGGGAGGCTAGGCAGTCATGTTTGGAATGGTGCACTGAGCATAACATTGAGTACATTGAAGCTTGTGCTTCAAATGTTGATTTTGACAAATGTTTGTCAGTTGATGGCGATTCACAAGGTGTTGAACGACTCTTTGGTGCTCTTTCTGCACATATGTGGCCTGGAATGATTCTGAAATCAGGCGATAAGATTGCTGAACCATCGTTACCTGAAAGAGAAGAAGACCTGTCAGAAGAAGAATCTGATTATGAATTTGAGTATGAAATCCTATCTGCGGGTTCAGCTGAACCACATGAAGACACGTATACAGGATGGGTTTCTGCAAATGATTTTGCGGGACCCTCAAGTATGGGAGGACTGGCTGCTCAAAATAATATTTTCCCAGAATGCAATCAAGAGAATGGAACCCTTTGTGATAAGGAGGAGCCACAGACCTCAACCTCGACAGCTGCTTTGCATGATGATATCAACAAAGGAGTGGTGTCCAATGTGGAAGAGCCTGACCAGGGCACAGAACTTGACCAAGCCCAGGAACTAGATGAGGATACCCCTCTTGAAGTTGAGGATTTGGAGCAGTTGATGTCTGAGATTGGGAACATGCGCGACAGCTTGAGATTGATGCCTGATTTTCAGAGAAGAGAAATGGCTGCAAAGCTGGCTTTGAAAATGGCCTCCATGTTTAGGGGCAGCAGTGATGATGAAGTGGAAAGTATCAGCTGA

Protein Analysis

418

Amino Acids

46.23

Weight (kDa)

4.2

Isoelectric Point (pI)

59.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 430
AccI GTMKAC 1 cut(s) 839
AccII CGCG 1 cut(s) 1137
AciI CCGC 2 cut(s) 809, 869
AclWI GGATC 2 cut(s) 393, 440
AcsI RAATTY 3 cut(s) 227, 350, 785
AcuI CTGAAG 3 cut(s) 302, 455, 519
AcyI GRCGYC 1 cut(s) 427
AdeI CACNNNGTG 1 cut(s) 653
AfaI GTAC 2 cut(s) 182, 587
AfiI CCNNNNNNNGG 5 cut(s) 74, 808, 1040, 1063, 1215
AflIII ACRYGT 1 cut(s) 834
AgsI TTSAA 6 cut(s) 347, 593, 606, 659, 1091, 1198
AjnI CCWGG 6 cut(s) 43, 394, 466, 694, 1038, 1062
AjuI GAANNNNNNNTTGG 2 cut(s) 651, 683
AleI CACNNNNGTG 1 cut(s) 688
AluBI AGCT 9 cut(s) 148, 191, 439, 596, 818, 983, 1143, 1189, 1251
AluI AGCT 9 cut(s) 148, 191, 439, 596, 818, 983, 1143, 1189, 1251
Alw21I GWGCWC 2 cut(s) 569, 676
Alw26I GTCTC 3 cut(s) 18, 233, 309
Alw44I GTGCAC 1 cut(s) 565
AlwI GGATC 2 cut(s) 393, 440
AoxI GGCC 3 cut(s) 41, 692, 1203
ApaLI GTGCAC 1 cut(s) 565
ApeKI GCWGC 5 cut(s) 311, 896, 983, 1181, 1221
ApoI RAATTY 3 cut(s) 227, 350, 785
ArsI GACNNNNNNTTYG 2 cut(s) 970, 1002
AspLEI GCGC 2 cut(s) 84, 1137
AspS9I GGNCC 2 cut(s) 464, 872
AsuHPI GGTGA 1 cut(s) 392
AvaII GGWCC 2 cut(s) 464, 872
BaeGI GKGCMC 2 cut(s) 569, 1046
BbsI GAAGAC 3 cut(s) 430, 762, 837
Bbv12I GWGCWC 2 cut(s) 569, 676
BbvI GCAGC 5 cut(s) 298, 883, 970, 1168, 1233
BccI CCATC 5 cut(s) 202, 538, 632, 742, 840
BcgI CGANNNNNNTGC 2 cut(s) 707, 741
BciT130I CCWGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
BciVI GTATCC 1 cut(s) 1072
BcoDI GTCTC 3 cut(s) 18, 233, 309
BfaI CTAG 2 cut(s) 543, 1070
BfuI GTATCC 1 cut(s) 1072
BisI GCNGC 5 cut(s) 312, 897, 984, 1182, 1222
BlsI GCNGC 5 cut(s) 313, 898, 985, 1183, 1223
BmcAI AGTACT 1 cut(s) 182
Bme1390I CCNGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
Bme18I GGWCC 2 cut(s) 464, 872
BmgT120I GGNCC 2 cut(s) 464, 872
BmiI GGNNCC 5 cut(s) 64, 873, 874, 940, 960
BmrFI CCNGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
BmrI ACTGGG 2 cut(s) 398, 524
BmsI GCATC 3 cut(s) 57, 112, 1143
BmuI ACTGGG 2 cut(s) 398, 524
BpiI GAAGAC 3 cut(s) 430, 762, 837
BpmI CTGGAG 1 cut(s) 53
BpuEI CTTGAG 2 cut(s) 862, 1165
BsaAI YACGTR 1 cut(s) 837
BsaHI GRCGYC 1 cut(s) 427
BsaI GGTCTC 1 cut(s) 233
BsaJI CCNNGG 5 cut(s) 58, 394, 467, 1039, 1062
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 808, 1040, 1063, 1215
Bse1I ACTGG 5 cut(s) 108, 259, 404, 519, 897
BseBI CCWGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
BseDI CCNNGG 5 cut(s) 58, 394, 467, 1039, 1062
BseGI GGATG 3 cut(s) 213, 526, 851
BseLI CCNNNNNNNGG 5 cut(s) 74, 808, 1040, 1063, 1215
BseMII CTCAG 5 cut(s) 158, 285, 468, 561, 1110
BseNI ACTGG 5 cut(s) 108, 259, 404, 519, 897
BseRI GAGGAG 1 cut(s) 971
BseSI GKGCMC 2 cut(s) 569, 1046
BseXI GCAGC 5 cut(s) 298, 883, 970, 1168, 1233
BsgI GTGCAG 2 cut(s) 297, 666
Bsh1236I CGCG 1 cut(s) 1137
BshFI GGCC 3 cut(s) 43, 694, 1205
BsiHKAI GWGCWC 2 cut(s) 569, 676
BslFI GGGAC 2 cut(s) 377, 885
BslI CCNNNNNNNGG 5 cut(s) 74, 808, 1040, 1063, 1215
BsmAI GTCTC 3 cut(s) 18, 233, 309
BsmBI CGTCTC 1 cut(s) 309
BsmFI GGGAC 2 cut(s) 377, 885
BsmI GAATGC 1 cut(s) 926
BsnI GGCC 3 cut(s) 43, 694, 1205
Bso31I GGTCTC 1 cut(s) 233
Bsp1286I GDGCHC 3 cut(s) 569, 676, 1046
Bsp143I GATC 4 cut(s) 273, 340, 385, 445
BspACI CCGC 2 cut(s) 809, 869
BspANI GGCC 3 cut(s) 43, 694, 1205
BspCNI CTCAG 5 cut(s) 157, 286, 469, 562, 1111
BspFNI CGCG 1 cut(s) 1137
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 5 cut(s) 64, 873, 874, 940, 960
BspPI GGATC 2 cut(s) 393, 440
BspQI GCTCTTC 1 cut(s) 1023
BspTNI GGTCTC 1 cut(s) 233
BsrI ACTGG 5 cut(s) 108, 259, 404, 519, 897
BssECI CCNNGG 5 cut(s) 58, 394, 467, 1039, 1062
BssMI GATC 4 cut(s) 273, 340, 385, 445
BssNAI GTATAC 1 cut(s) 840
BssNI GRCGYC 1 cut(s) 427
Bst1107I GTATAC 1 cut(s) 840
Bst2UI CCWGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
Bst6I CTCTTC 3 cut(s) 32, 1023, 1165
BstACI GRCGYC 1 cut(s) 427
BstBAI YACGTR 1 cut(s) 837
BstC8I GCNNGC 3 cut(s) 80, 267, 1191
BstDEI CTNAG 5 cut(s) 144, 294, 477, 570, 1119
BstEII GGTNACC 1 cut(s) 398
BstF5I GGATG 3 cut(s) 213, 526, 851
BstFNI CGCG 1 cut(s) 1137
BstHHI GCGC 2 cut(s) 84, 1137
BstKTI GATC 4 cut(s) 276, 343, 388, 448
BstMAI GTCTC 3 cut(s) 18, 233, 309
BstMBI GATC 4 cut(s) 273, 340, 385, 445
BstMWI GCNNNNNNNGC 4 cut(s) 88, 680, 815, 1190
BstNI CCWGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
BstNSI RCATGY 1 cut(s) 1135
BstPI GGTNACC 1 cut(s) 398
BstSCI CCNGG 6 cut(s) 43, 394, 466, 694, 1038, 1062
BstSLI GKGCMC 2 cut(s) 569, 1046
BstUI CGCG 1 cut(s) 1137
BstV1I GCAGC 5 cut(s) 298, 883, 970, 1168, 1233
BstV2I GAAGAC 3 cut(s) 430, 762, 837
BstX2I RGATCY 2 cut(s) 385, 445
BstYI RGATCY 2 cut(s) 385, 445
BstZ17I GTATAC 1 cut(s) 840
BsuI GTATCC 1 cut(s) 1072
BsuRI GGCC 3 cut(s) 43, 694, 1205
BtsCI GGATG 3 cut(s) 213, 526, 851
BtsI GCAGTG 1 cut(s) 1231
BtsIMutI CAGTG 4 cut(s) 291, 474, 567, 1231
Cac8I GCNNGC 3 cut(s) 80, 267, 1191
CciI TCATGA 1 cut(s) 220
CfoI GCGC 2 cut(s) 84, 1137
Cfr13I GGNCC 2 cut(s) 464, 872
Csp6I GTAC 2 cut(s) 181, 586
CviAII CATG 8 cut(s) 221, 410, 534, 552, 827, 992, 1132, 1210
CviQI GTAC 2 cut(s) 181, 586
DdeI CTNAG 5 cut(s) 144, 294, 477, 570, 1119
DpnI GATC 4 cut(s) 275, 342, 387, 447
DpnII GATC 4 cut(s) 273, 340, 385, 445
DraIII CACNNNGTG 1 cut(s) 653
Eam1104I CTCTTC 3 cut(s) 32, 1023, 1165
EarI CTCTTC 3 cut(s) 32, 1023, 1165
Eco147I AGGCCT 1 cut(s) 43
Eco31I GGTCTC 1 cut(s) 233
Eco32I GATATC 1 cut(s) 1000
Eco47I GGWCC 2 cut(s) 464, 872
Eco57I CTGAAG 3 cut(s) 302, 455, 519
Eco91I GGTNACC 1 cut(s) 398
EcoO109I RGGNCCY 1 cut(s) 872
EcoO65I GGTNACC 1 cut(s) 398
EcoRII CCWGG 6 cut(s) 43, 394, 466, 694, 1038, 1062
EcoRV GATATC 1 cut(s) 1000
EcoT22I ATGCAT 1 cut(s) 371
Esp3I CGTCTC 1 cut(s) 309
FaeI CATG 8 cut(s) 224, 413, 537, 555, 830, 995, 1135, 1213
FaqI GGGAC 2 cut(s) 377, 885
FatI CATG 8 cut(s) 220, 409, 533, 551, 826, 991, 1131, 1209
FauI CCCGC 2 cut(s) 802, 862
FauNDI CATATG 1 cut(s) 687
FblI GTMKAC 1 cut(s) 839
Fnu4HI GCNGC 5 cut(s) 312, 897, 984, 1182, 1222
FokI GGATG 3 cut(s) 220, 533, 858
Fsp4HI GCNGC 5 cut(s) 312, 897, 984, 1182, 1222
FspBI CTAG 2 cut(s) 543, 1070
GlaI GCGC 2 cut(s) 83, 1136
GluI GCNGC 5 cut(s) 312, 897, 984, 1182, 1222
GsuI CTGGAG 1 cut(s) 53
HaeIII GGCC 3 cut(s) 43, 694, 1205
HhaI GCGC 2 cut(s) 84, 1137
Hin1I GRCGYC 1 cut(s) 427
Hin1II CATG 8 cut(s) 224, 413, 537, 555, 830, 995, 1135, 1213
Hin6I GCGC 2 cut(s) 82, 1135
HinP1I GCGC 2 cut(s) 82, 1135
HindIII AAGCTT 2 cut(s) 437, 594
HinfI GANTC 8 cut(s) 26, 131, 458, 486, 644, 663, 703, 773
HphI GGTGA 1 cut(s) 392
Hpy166II GTNNAC 4 cut(s) 474, 512, 567, 840
Hpy188I TCNGA 8 cut(s) 130, 321, 493, 708, 766, 778, 1120, 1167
Hpy188III TCNNGA 6 cut(s) 32, 96, 221, 333, 929, 1088
Hpy8I GTNNAC 4 cut(s) 474, 512, 567, 840
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 3 cut(s) 10, 14, 494
HpyCH4IV ACGT 3 cut(s) 72, 427, 836
HpyCH4V TGCA 9 cut(s) 265, 314, 369, 567, 683, 857, 924, 991, 1184
HpyF10VI GCNNNNNNNGC 4 cut(s) 88, 680, 815, 1190
HpyF3I CTNAG 5 cut(s) 144, 294, 477, 570, 1119
HpySE526I ACGT 3 cut(s) 72, 427, 836
Hsp92I GRCGYC 1 cut(s) 427
Hsp92II CATG 8 cut(s) 224, 413, 537, 555, 830, 995, 1135, 1213
HspAI GCGC 2 cut(s) 82, 1135
KflI GGGWCCC 1 cut(s) 872
Kzo9I GATC 4 cut(s) 273, 340, 385, 445
LguI GCTCTTC 1 cut(s) 1023
LmnI GCTCC 3 cut(s) 68, 958, 1105
Lsp1109I GCAGC 5 cut(s) 298, 883, 970, 1168, 1233
LweI GCATC 3 cut(s) 57, 112, 1143
MaeI CTAG 2 cut(s) 543, 1070
MaeII ACGT 3 cut(s) 72, 427, 836
MaeIII GTNAC 2 cut(s) 398, 738
MalI GATC 4 cut(s) 275, 342, 387, 447
MboI GATC 4 cut(s) 273, 340, 385, 445
MflI RGATCY 2 cut(s) 385, 445
MhlI GDGCHC 3 cut(s) 569, 676, 1046
MluCI AATT 3 cut(s) 227, 350, 785
MlyI GAGTC 2 cut(s) 20, 657
Mph1103I ATGCAT 1 cut(s) 371
MseI TTAA 1 cut(s) 156
MslI CAYNNNNRTG 2 cut(s) 219, 688
MspA1I CMGCKG 4 cut(s) 191, 818, 983, 1251
MspR9I CCNGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
Mva1269I GAATGC 1 cut(s) 926
MvaI CCWGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
MvnI CGCG 1 cut(s) 1137
MwoI GCNNNNNNNGC 4 cut(s) 88, 680, 815, 1190
NdeI CATATG 1 cut(s) 687
NdeII GATC 4 cut(s) 273, 340, 385, 445
NlaIII CATG 8 cut(s) 224, 413, 537, 555, 830, 995, 1135, 1213
NlaIV GGNNCC 5 cut(s) 64, 873, 874, 940, 960
NmeAIII GCCGAG 1 cut(s) 39
NmuCI GTSAC 1 cut(s) 398
NsiI ATGCAT 1 cut(s) 371
NspI RCATGY 1 cut(s) 1135
OliI CACNNNNGTG 1 cut(s) 688
PagI TCATGA 1 cut(s) 220
PceI AGGCCT 1 cut(s) 43
PciSI GCTCTTC 1 cut(s) 1023
PctI GAATGC 1 cut(s) 926
PfeI GAWTC 6 cut(s) 131, 458, 486, 644, 703, 773
PkrI GCNGC 5 cut(s) 313, 898, 985, 1183, 1223
PleI GAGTC 2 cut(s) 20, 657
PpsI GAGTC 2 cut(s) 20, 657
Ppu21I YACGTR 1 cut(s) 837
PpuMI RGGWCCY 1 cut(s) 872
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 6 cut(s) 43, 394, 466, 694, 1038, 1062
PspEI GGTNACC 1 cut(s) 398
PspGI CCWGG 6 cut(s) 43, 394, 466, 694, 1038, 1062
PspN4I GGNNCC 5 cut(s) 64, 873, 874, 940, 960
PspPI GGNCC 2 cut(s) 464, 872
PspPPI RGGWCCY 1 cut(s) 872
PsrI GAACNNNNNNTAC 2 cut(s) 723, 755
PsuI RGATCY 2 cut(s) 385, 445
PvuII CAGCTG 4 cut(s) 191, 818, 983, 1251
RsaI GTAC 2 cut(s) 182, 587
RsaNI GTAC 2 cut(s) 181, 586
RseI CAYNNNNRTG 2 cut(s) 219, 688
SapI GCTCTTC 1 cut(s) 1023
SaqAI TTAA 1 cut(s) 156
SatI GCNGC 5 cut(s) 312, 897, 984, 1182, 1222
Sau3AI GATC 4 cut(s) 273, 340, 385, 445
Sau96I GGNCC 2 cut(s) 464, 872
ScaI AGTACT 1 cut(s) 182
SchI GAGTC 2 cut(s) 20, 657
ScrFI CCNGG 6 cut(s) 45, 396, 468, 696, 1040, 1064
SduI GDGCHC 3 cut(s) 569, 676, 1046
SfaNI GCATC 3 cut(s) 57, 112, 1143
SinI GGWCC 2 cut(s) 464, 872
SmiMI CAYNNNNRTG 2 cut(s) 219, 688
SmlI CTYRAG 2 cut(s) 877, 1144
SmoI CTYRAG 2 cut(s) 877, 1144
Sse9I AATT 3 cut(s) 227, 350, 785
SseBI AGGCCT 1 cut(s) 43
SsiI CCGC 2 cut(s) 809, 869
SspI AATATT 2 cut(s) 169, 910
SspMI CTAG 2 cut(s) 543, 1070
StuI AGGCCT 1 cut(s) 43
StyD4I CCNGG 6 cut(s) 43, 394, 466, 694, 1038, 1062
TaiI ACGT 3 cut(s) 75, 430, 839
TaqI TCGA 3 cut(s) 97, 334, 977
TasI AATT 3 cut(s) 227, 350, 785
TatI WGTACW 2 cut(s) 180, 585
TfiI GAWTC 6 cut(s) 131, 458, 486, 644, 703, 773
Tru1I TTAA 1 cut(s) 156
Tru9I TTAA 1 cut(s) 156
TscAI CASTG 4 cut(s) 298, 481, 574, 1231
TseFI GTSAC 1 cut(s) 398
TseI GCWGC 5 cut(s) 311, 896, 983, 1181, 1221
Tsp45I GTSAC 1 cut(s) 398
TspDTI ATGAA 8 cut(s) 129, 209, 240, 398, 798, 810, 843, 1248
TspGWI ACGGA 1 cut(s) 190
TspRI CASTG 4 cut(s) 298, 481, 574, 1231
VneI GTGCAC 1 cut(s) 565
VpaK11BI GGWCC 2 cut(s) 464, 872
XapI RAATTY 3 cut(s) 227, 350, 785
XceI RCATGY 1 cut(s) 1135
XmiI GTMKAC 1 cut(s) 839
XspI CTAG 2 cut(s) 543, 1070
ZraI GACGTC 1 cut(s) 428
ZrmI AGTACT 1 cut(s) 182
Zsp2I ATGCAT 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.