Rorug02G0061700
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
4809490 .. 4821244
11755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0061700.1

Sequence Viewer

Length: 4269 bp
ATGATGAAGCAGAGTTGGGATGAGCAAGAAGAGGTGCCGCGTCTACCTCAGAAGGTGGAGGTATTGCTCCGGCAAATCTGTGAGGACAAAAAGCAACCTTGGCCGGACGCTGACGCCATAAGGCAGCTCGCGGCTCAGAGCGAGGAGTCGGCAATGGAGACCCTGAAGAAAATCTCGACCAGCACAAGCATCAGAACCACCCTCGGCCGTTATATAAAGTGGATGATCCGGCAATGTAGCTCTGCTTCTCCGTCGCCGTCCAAAACGGTGCGTTCCGCTCACGTTCAAAGCCCTGATGCTACTTCACTCACTCCTCAGAGACTTCACTTCAGCCCTCCAGGTGAGGCAGTTGGTGACGGGTCACCTGTTGTTGGGCAATTACCTTATTGCTCAGGTTCTCCATCGAAAGCCGCGGTGACTTGTTCTTGTCAAAGATTGTCTGCTCATGCACAAGTCGATGAGGGGTCTCGAGGCGAGGCATTTAATCACCTGTCACCTGTTATTGGTCAATCACCTTATTCCTCTGGTTCTCCTTTGAAAGCCGCAGACACTTCTTCTTATCAAAGACTGTCTGCTCCTGTACAACTGGATGAGAGATTTCAAGGTGATGCATTTAGTCATCGGTCACCTGTTGGACAACCACCTTATTCCTCTGCTTCTCCATCAAAAGCTGCAGGCACTACTTCTTATCAAAGATTGTCTCCTCCTGTACAACTTGATGATACGTTTCAAGGTGAGGCATTTAATCACCGGTCACCTGTTATTGAACAATCACCTTATTCCTCTGGTTCTCCATTGAAAGCTGCAGGCACTTCTTATCAAAGACTGTCTGCTCCTGTCCAACATGATGAGAGGTTTCAAGGTGATGCATTTAGTCATCCGTCATCTGTTGGACAACCACCTTATTCCTCTGCTTCTCCATCAAAAGCTGCAGGGGAGGCATTTACTGTTCTAGAGCAACCAGGAAACATCAATAATGGACAATCACCTTATTATTCCTCTGGTTCTCCATTGAAAGTGGCACGCACTTGTTCTTGTCAAAGCCCATCTGCGTTGGTTGCTCCTATACAACTTGATAAGAAGTTTCAAGGTGACACATTTACTGACAGGTCACTTGTTCGACAATTACCTTGTTCCTGTGGTTCTTCATTAAAAGCCACAGGTTCTTATGAAAGATTGTCTACTCCTATACAAGCTGATGAGCGGTTTCATGGTGAGGCATTTAGTGCCCGGTCAGCTGTTGGACAATTACCTTGTTCCTCTGTTTCTCCATTAAAATCCGCAGTCACTTCTTCTTATCAAAGATTGTCTACTCCTGTACAGCTTGATGAGAGGTTTCAAGTTGAGGCATTTAATGACCGGGCACCTGTTATTGGACAATCACCTTACTCCTCTGGTTCTCCATTGAAAGCCGCAAGCACTTCTTATCAAAGACTGACTGCTCCTCTACAACTGGATGAGAGGTTTCAAGGTGGGGTATTTGCTGATCAGACACCTGTTCAAGGACAATCACCATATGCCTCTTGTTCTCCATCAAAAGCCTTCTGCATTTCTCCTTATCAGAGAATGTCTGCTGATGTTGTTCCTGTACAACTTCATGAAAGGTTTCAAGGTGAGGGTATCACTAGGTCCTCAGTTATAGACAAACCTGGAGATCATGGAGAAGCACACTTAGTAGCTCTGGGTGAACTAGAATTCCGTAAACAATTTCTGATTTTAAGTTATGCTGGAGGAATGAAGTTGAGAGATCTTATAGCAGCAGAGGACATTAGGGATTGGAAATATTTGCCAATGGTAACGTTTGAGAGCAAAATTTGGGAGTATCTAGGTCGAAAATGCATCAGCCTTGAAGACCGTCGATTGAATTTTGATTGGGATTCTGGACGCACACACGTCTATTATTGTTACGTCAACGTGGATGGGAGTTACATATTTAAGGGCCCATATTTATATAAAATAAGAAGAACGCTCCTACAGAAAAAATTAGGAGATGACAATGTTTTAATGGTGAAGTTTGCCAAAGAAGAGGTGCAGAGAGGTCAAAGTATTGCTTGCCATCATAATTATTCTATGTATATGAAGGTTGCAAGAGAAGGGATTCTTGTTGGTCTGCGGCGATATCGTTTCTTTGTGTTCAAAGATGGTGGTAATGAGGAGAAGAAAAAAAACCCAACTTCATCACCTGTGAAGTGTTACTTTGTTCGAGTGGCCTCTGATGCAGCCATAGACAAAGGTGTCAGTTATATATTATCTAACAGAACGATGTATGAAGCCAGATGTCTTTTCATGCATGCACATACTCTGGCTAGTATCGATAACTACATGATTAGGTTCTCACTCATTTTGTCCAAGACAACGAGCTTAAAAGTAGATTGGTCAGTTGTCAAGGTTGAAATCATCGGTGAAGAATACTGTCTCGATGAATCTGGTAATCGTATCCATAGAGATGAAAAACCACTTATACATACAGATGGAACTGGATTCATATCTGAGGATTTGGCTTTAATTTGTCCAAAGATAGAAGCCAAAGGACAAAGTATAAGTGATGAACACATGAAGGGACTTCCTGATCCTGATGAACTTGAGGATAATGATATGGGAAAGAAAAGGCCAGTTCTTAGAACTGAAGAACCGCCTTTGCTCACACAGTGCCGACTTTTTCACAATGGCAGTGCTTCTAAAGGAACGTTTCTTGTCAATAAAAAGCTCCATCCGAACACAATCCAGATTCGACCATCTATGCTCAAAGTTAAGACAGATCCAACGATTTCCAATAATCAAACAATCAACTCATTGGAAATAGTTGGCACAAGTACTCCTCCTAGGAATACGCACTTATCGAGGATTTTAATTGCACTTCTAATGCATGGAGGGGTACCGGAAGAATTTTTCATGCAGATACTTAACCAAGCTTTGGAAGATGCTCATGGTGTTTTCTGCAAGATACGTGCAGCACTCAAAGTTGCTGAGAAGTATGGTGAGATTGATGACAATTTCTTGGGGAAATTAATGATCTCATTTGGAATACCTCTAGAAGAATCATACTTGCGGTATCGTCTCTCAGTCCTAATGAAAGAGGAAAACAACAGTCTTAGAAAAGGGAAACTTTATATTCCTGATTCCTATAATTTGATGGGGACAGCTGATCCAACAGGGACTTTAAAAAAGGATGAAGTCTGTGTTATCCTGAAGGATGGACAACTGTCGGGGAAGGTACTAGTCTACAGATATCCGGGTTTACACTTCGGGGATATTCATGTTCTAAAGGCGACCTATGTGAAGGAGTTAGAATCTTTTGTTGGAAATGCCAAATACGGTATATTCTTCTCTTGCAAAGGTCCACGTTCCATTGCTGATGAAATGGGTGGTGGAGATTTTGATGGTGATCTATACTGGGTCTCAAGAAACCCTCAGCTATTGGAGTGGTACAAACCAAGTGAACCTTGGATTGAAGCTTCAATATCAACCCAAAAAGTTCCCAGTAGGAGTCCATCTGACTATTCGCCTGAAGATCTAGAAGATGTTCTGTTTAGATCATTCTTGACAACTAGGTTTGAACCAAGTTTCGCTATGAGTGAGGCAGCTGATAATTGGCTAGCCTGGATGGATCGTTTCTTGACTTTAGGAGAGAGTGACATTGACGAAAAGAATAATGTGAAGGATAAGATACTGCAACTAATTAACTTATACTACACGGCTCTAGATGCACCGAAGAAAGGTGTAAAGGTTGTAGTTCCAAAAGAATTGAAGGTCCCATGTTTCCCCCATTACATGGGAAAGAACAATTCTTACCCTTCAACTTCCGTTTTGGGATTAATTTGTAACAGGGTGGATGAGCATCAAACAGAAGACCATTCTCTCAAAGAAGTCGAGAAACTTCCTGCTTTTGATGTTAATGAAGTCCCTGATGCCTGCTTGGACAAATGGGAGGAACTACACCGACAGTACAGGAGTGAGATGGCCTCTGCTATGGACGATGCTGATAAACAGAGCAAAAATCAGTCTGCCGATGTGGTCATAAGGAAATATAAAAAGATTCTTTACGAGGCTAATGACTTTGAGGAGAGTAGAAGGCCGATCGATGAGATATATAACGAGGCACAAGCTATATATCATGTGTGTTATGACCATGCGAGGAGGATAGGAGGTGTGAAGGCGTGTTCCTTTGCGTGGAAAGTTGCAGGTAAAGCTCTGTGCCAGCTTCACGCCAAGAACACGAATGAAAGGTGTTGTACGATAGTATCCTCTGTTTTGAAGGAGATTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1422

Amino Acids

158.66

Weight (kDa)

7.04

Isoelectric Point (pI)

49.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RdRP_helical PF26252 557 - 621 6.3e-07 RNA dependent RNA polymerase, helical domain
RdRP PF05183 643 - 1276 4.5e-98 RNA dependent RNA polymerase
RdRP_head PF26253 1296 - 1406 1.2e-13 RdRP, head domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000519)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g27751 FvH4_2g10620 FvH4_4g13701 FvH4_4g17370 FvH4_6g49051
pyrus_communis pycom11g18020
rosa_chinensis RchiOBHm_Chr1g0331041 RchiOBHm_Chr2g0088901 RchiOBHm_Chr2g0100641 RchiOBHm_Chr6g0281891
rosa_laevigata RLG00000011791 RLG00000028155 RLG00000035981
rosa_multiflora Rmu_co8368635.1_g000001 Rmu_co8370105.1_g000001 Rmu_sc0000850.1_g000010 Rmu_sc0001374.1_g000060 Rmu_sc0001654.1_g000024 Rmu_sc0001840.1_g000023 Rmu_sc0001900.1_g000032 Rmu_sc0002687.1_g000008 Rmu_sc0003133.1_g000026 Rmu_sc0003252.1_g000002 Rmu_sc0004206.1_g000011 Rmu_sc0004666.1_g000002 Rmu_sc0006255.1_g000004 Rmu_sc0006812.1_g000001 Rmu_sc0007025.1_g000012 Rmu_sc0007767.1_g000020 Rmu_sc0007833.1_g000004 Rmu_sc0007848.1_g000020 Rmu_sc0007883.1_g000010 Rmu_sc0008270.1_g000003 Rmu_sc0012097.1_g000011 Rmu_sc0014445.1_g000002 Rmu_sc0023292.1_g000001
rosa_roxburghii Rroxscaffold_1G00021670 Rroxscaffold_1G00027660 Rroxscaffold_1G00056090 Rroxscaffold_2G00111250 Rroxscaffold_2G00111320 Rroxscaffold_3G00248390 Rroxscaffold_6G00394880 Rroxscaffold_7G00192450
rosa_rugosa Rorug01G0071500 Rorug01G0183900 Rorug01G0242400 Rorug02G0045300 Rorug02G0051000 Rorug02G0061700 Rorug02G0091500 Rorug02G0091600 Rorug02G0091700 Rorug02G0091800 Rorug02G0284700 Rorug02G0335100 Rorug02G0336900 Rorug02G0405500.1 Rorug02G0498300 Rorug03G0173700 Rorug03G0228900 Rorug03G0256300 Rorug04G0014300 Rorug04G0130400 Rorug04G0138100 Rorug04G0138100 Rorug04G0150400.1 Rorug05G0000600 Rorug05G0160400 Rorug05G0165600 Rorug05G0378500 Rorug06G0072000 Rorug06G0107900 Rorug06G0268700 Rorug07G0015500 Rorug07G0266300 Rorug07G0274500
rosa_samantha Rh2AG439400 Rh2AG561100 Rh2DG459400 Rh3AG236100 Rh4BG212500 Rh6AG046300 Rh6BG073000 Rh7DG249100
rosa_wichuraiana Rw2G010910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2234
Acc36I ACCTGC 1 cut(s) 4172
Acc65I GGTACC 1 cut(s) 2875
AccB1I GGYRCC 3 cut(s) 34, 1363, 2875
AccB7I CCANNNNNTGG 2 cut(s) 2914, 3772
AccBSI CCGCTC 2 cut(s) 278, 1204
AccI GTMKAC 4 cut(s) 43, 1181, 1310, 3222
AccII CGCG 3 cut(s) 40, 131, 413
AclI AACGTT 2 cut(s) 1799, 2687
AclWI GGATC 5 cut(s) 220, 2564, 2753, 3140, 3615
AcoI YGGCCR 2 cut(s) 101, 205
AcsI RAATTY 4 cut(s) 1694, 1812, 1864, 2885
AcuI CTGAAG 5 cut(s) 185, 313, 2646, 3209, 3528
AcyI GRCGYC 1 cut(s) 114
AdeI CACNNNGTG 1 cut(s) 2649
AfiI CCNNNNNNNGG 8 cut(s) 371, 503, 1373, 1502, 2914, 3716, 3772, 4170
AflIII ACRYGT 1 cut(s) 1891
AgeI ACCGGT 1 cut(s) 750
AhlI ACTAGT 1 cut(s) 3217
AjiI CACGTC 1 cut(s) 1894
AjnI CCWGG 4 cut(s) 337, 961, 1648, 3599
AjuI GAANNNNNNNTTGG 2 cut(s) 3282, 3314
AloI GAACNNNNNNTCC 2 cut(s) 1680, 1712
Alw26I GTCTC 7 cut(s) 152, 313, 471, 705, 2420, 3062, 3403
AlwI GGATC 5 cut(s) 220, 2564, 2753, 3140, 3615
Ama87I CYCGRG 1 cut(s) 468
AoxI GGCC 7 cut(s) 101, 205, 1939, 2208, 2609, 3960, 4073
ApaI GGGCCC 1 cut(s) 1943
ApeKI GCWGC 8 cut(s) 124, 671, 803, 929, 1757, 2219, 2951, 3581
ApoI RAATTY 4 cut(s) 1694, 1812, 1864, 2885
AseI ATTAAT 2 cut(s) 3008, 3815
AsiGI ACCGGT 1 cut(s) 750
Asp700I GAANNNNTTC 3 cut(s) 1605, 2097, 3522
Asp718I GGTACC 1 cut(s) 2875
AspA2I CCTAGG 1 cut(s) 2822
AspS9I GGNCC 5 cut(s) 1629, 1939, 1940, 3338, 3751
AsuC2I CCSGG 3 cut(s) 1231, 1361, 3234
AsuNHI GCTAGC 1 cut(s) 3595
AvaI CYCGRG 1 cut(s) 468
AvaII GGWCC 3 cut(s) 1629, 3338, 3751
AvrII CCTAGG 1 cut(s) 2822
BaeGI GKGCMC 3 cut(s) 1231, 1366, 1943
BaeI ACNNNNGTAYC 2 cut(s) 4224, 4257
BanI GGYRCC 3 cut(s) 34, 1363, 2875
BanII GRGCYC 1 cut(s) 1943
BarI GAAGNNNNNNTAC 2 cut(s) 229, 261
BbsI GAAGAC 2 cut(s) 1857, 3855
BbvCI CCTCAGC 1 cut(s) 3411
BbvI GCAGC 8 cut(s) 136, 658, 790, 916, 1769, 2231, 2963, 3593
BceAI ACGGC 3 cut(s) 192, 241, 3711
BciT130I CCWGG 4 cut(s) 339, 963, 1650, 3601
BciVI GTATCC 2 cut(s) 2447, 4252
BclI TGATCA 1 cut(s) 1486
BcnI CCSGG 3 cut(s) 1231, 1361, 3234
BcoDI GTCTC 7 cut(s) 152, 313, 471, 705, 2420, 3062, 3403
BcuI ACTAGT 1 cut(s) 3217
BfmI CTRYAG 5 cut(s) 672, 804, 930, 1973, 3223
BfuAI ACCTGC 1 cut(s) 4172
BfuI GTATCC 2 cut(s) 2447, 4252
BglII AGATCT 2 cut(s) 1747, 3511
BlnI CCTAGG 1 cut(s) 2822
BmcAI AGTACT 1 cut(s) 2815
Bme1390I CCNGG 7 cut(s) 339, 963, 1231, 1361, 1650, 3234, 3601
Bme18I GGWCC 3 cut(s) 1629, 3338, 3751
BmeT110I CYCGRG 1 cut(s) 468
BmgBI CACGTC 1 cut(s) 1894
BmgT120I GGNCC 5 cut(s) 1629, 1939, 1940, 3338, 3751
BmiI GGNNCC 5 cut(s) 36, 1365, 1941, 2877, 3753
BmrFI CCNGG 7 cut(s) 339, 963, 1231, 1361, 1650, 3234, 3601
BmrI ACTGGG 2 cut(s) 3403, 3474
BmtI GCTAGC 1 cut(s) 3599
BmuI ACTGGG 2 cut(s) 3403, 3474
BoxI GACNNNNGTC 1 cut(s) 3202
BpiI GAAGAC 2 cut(s) 1857, 3855
BplI GAGNNNNNCTC 2 cut(s) 3947, 3979
BpmI CTGGAG 3 cut(s) 321, 1671, 1749
Bpu10I CCTNAGC 2 cut(s) 391, 3411
BpuEI CTTGAG 2 cut(s) 2603, 3385
BpuMI CCSGG 3 cut(s) 1231, 1361, 3234
Bsa29I ATCGAT 2 cut(s) 2313, 4080
BsaAI YACGTR 1 cut(s) 2948
BsaBI GATNNNNATC 3 cut(s) 2485, 3384, 3837
BsaHI GRCGYC 1 cut(s) 114
BsaI GGTCTC 3 cut(s) 152, 471, 3403
BsaJI CCNNGG 5 cut(s) 98, 202, 411, 2822, 3443
BsaWI WCCGGW 2 cut(s) 750, 2878
BsaXI ACNNNNNCTCC 3 cut(s) 2800, 2830, 4250
Bsc4I CCNNNNNNNGG 8 cut(s) 371, 503, 1373, 1502, 2914, 3716, 3772, 4170
Bse118I RCCGGY 1 cut(s) 750
Bse1I ACTGG 6 cut(s) 591, 1458, 2482, 2612, 3398, 3480
Bse3DI GCAATG 3 cut(s) 159, 239, 3348
Bse8I GATNNNNATC 3 cut(s) 2485, 3384, 3837
BseBI CCWGG 4 cut(s) 339, 963, 1650, 3601
BseCI ATCGAT 2 cut(s) 2313, 4080
BseDI CCNNGG 5 cut(s) 98, 202, 411, 2822, 3443
BseJI GATNNNNATC 3 cut(s) 2485, 3384, 3837
BseLI CCNNNNNNNGG 8 cut(s) 371, 503, 1373, 1502, 2914, 3716, 3772, 4170
BseMI GCAATG 3 cut(s) 159, 239, 3348
BseMII CTCAG 9 cut(s) 62, 149, 329, 405, 1647, 2481, 2958, 3075, 3425
BseNI ACTGG 6 cut(s) 591, 1458, 2482, 2612, 3398, 3480
BseRI GAGGAG 9 cut(s) 158, 303, 693, 1381, 1434, 2168, 2808, 4076, 4150
BseSI GKGCMC 3 cut(s) 1231, 1366, 1943
BseX3I CGGCCG 1 cut(s) 205
BseXI GCAGC 8 cut(s) 136, 658, 790, 916, 1769, 2231, 2963, 3593
BsgI GTGCAG 2 cut(s) 2051, 2970
Bsh1236I CGCG 3 cut(s) 40, 131, 413
Bsh1285I CGRYCG 2 cut(s) 208, 4080
BshFI GGCC 7 cut(s) 103, 207, 1941, 2210, 2611, 3962, 4075
BshNI GGYRCC 3 cut(s) 34, 1363, 2875
BshTI ACCGGT 1 cut(s) 750
BshVI ATCGAT 2 cut(s) 2313, 4080
BsiEI CGRYCG 2 cut(s) 208, 4080
BsiHKCI CYCGRG 1 cut(s) 468
BsiSI CCGG 8 cut(s) 70, 104, 229, 751, 1231, 1360, 2879, 3233
BslFI GGGAC 5 cut(s) 2574, 3151, 3169, 3737, 3887
BslI CCNNNNNNNGG 8 cut(s) 371, 503, 1373, 1502, 2914, 3716, 3772, 4170
BsmAI GTCTC 7 cut(s) 152, 313, 471, 705, 2420, 3062, 3403
BsmBI CGTCTC 1 cut(s) 3062
BsmFI GGGAC 5 cut(s) 2574, 3151, 3169, 3737, 3887
BsnI GGCC 7 cut(s) 103, 207, 1941, 2210, 2611, 3962, 4075
Bso31I GGTCTC 3 cut(s) 152, 471, 3403
BsoBI CYCGRG 1 cut(s) 468
Bsp120I GGGCCC 1 cut(s) 1939
Bsp1286I GDGCHC 3 cut(s) 1231, 1366, 1943
Bsp1407I TGTACA 4 cut(s) 580, 709, 1318, 1588
BspANI GGCC 7 cut(s) 103, 207, 1941, 2210, 2611, 3962, 4075
BspCNI CTCAG 9 cut(s) 61, 148, 328, 404, 1646, 2482, 2959, 3074, 3424
BspDI ATCGAT 2 cut(s) 2313, 4080
BspFNI CGCG 3 cut(s) 40, 131, 413
BspHI TCATGA 1 cut(s) 1597
BspLI GGNNCC 5 cut(s) 36, 1365, 1941, 2877, 3753
BspMAI CTGCAG 3 cut(s) 676, 808, 934
BspMI ACCTGC 1 cut(s) 4172
BspOI GCTAGC 1 cut(s) 3599
BspPI GGATC 5 cut(s) 220, 2564, 2753, 3140, 3615
BspT107I GGYRCC 3 cut(s) 34, 1363, 2875
BspTNI GGTCTC 3 cut(s) 152, 471, 3403
BsrBI CCGCTC 2 cut(s) 278, 1204
BsrDI GCAATG 3 cut(s) 159, 239, 3348
BsrFI RCCGGY 1 cut(s) 750
BsrGI TGTACA 4 cut(s) 580, 709, 1318, 1588
BsrI ACTGG 6 cut(s) 591, 1458, 2482, 2612, 3398, 3480
BssAI RCCGGY 1 cut(s) 750
BssECI CCNNGG 5 cut(s) 98, 202, 411, 2822, 3443
BssNI GRCGYC 1 cut(s) 114
BssT1I CCWWGG 3 cut(s) 98, 2822, 3443
Bst2UI CCWGG 4 cut(s) 339, 963, 1650, 3601
Bst6I CTCTTC 2 cut(s) 24, 2019
BstACI GRCGYC 1 cut(s) 114
BstAPI GCANNNNNTGC 1 cut(s) 1226
BstAUI TGTACA 4 cut(s) 580, 709, 1318, 1588
BstBAI YACGTR 1 cut(s) 2948
BstDSI CCRYGG 1 cut(s) 411
BstEII GGTNACC 3 cut(s) 360, 624, 753
BstENI CCTNNNNNAGG 1 cut(s) 1500
BstFNI CGCG 3 cut(s) 40, 131, 413
BstMAI GTCTC 7 cut(s) 152, 313, 471, 705, 2420, 3062, 3403
BstMCI CGRYCG 2 cut(s) 208, 4080
BstMWI GCNNNNNNNGC 8 cut(s) 100, 938, 1058, 1226, 1235, 2216, 3704, 4187
BstNI CCWGG 4 cut(s) 339, 963, 1650, 3601
BstNSI RCATGY 1 cut(s) 2294
BstPAI GACNNNNGTC 1 cut(s) 3202
BstPI GGTNACC 3 cut(s) 360, 624, 753
BstSCI CCNGG 7 cut(s) 337, 961, 1229, 1359, 1648, 3232, 3599
BstSFI CTRYAG 5 cut(s) 672, 804, 930, 1973, 3223
BstSLI GKGCMC 3 cut(s) 1231, 1366, 1943
BstUI CGCG 3 cut(s) 40, 131, 413
BstV1I GCAGC 8 cut(s) 136, 658, 790, 916, 1769, 2231, 2963, 3593
BstV2I GAAGAC 2 cut(s) 1857, 3855
BstX2I RGATCY 3 cut(s) 1747, 2758, 3511
BstYI RGATCY 3 cut(s) 1747, 2758, 3511
BstZI CGGCCG 1 cut(s) 205
Bsu15I ATCGAT 2 cut(s) 2313, 4080
BsuI GTATCC 2 cut(s) 2447, 4252
BsuRI GGCC 7 cut(s) 103, 207, 1941, 2210, 2611, 3962, 4075
BsuTUI ATCGAT 2 cut(s) 2313, 4080
BtgI CCRYGG 1 cut(s) 411
BtrI CACGTC 1 cut(s) 1894
BtsI GCAGTG 1 cut(s) 2677
BtsIMutI CAGTG 2 cut(s) 2654, 2677
BveI ACCTGC 1 cut(s) 4172
CciI TCATGA 1 cut(s) 1597
Cfr10I RCCGGY 1 cut(s) 750
Cfr13I GGNCC 5 cut(s) 1629, 1939, 1940, 3338, 3751
Cfr42I CCGCGG 1 cut(s) 414
ClaI ATCGAT 2 cut(s) 2313, 4080
CseI GACGC 4 cut(s) 29, 116, 122, 1893
CspAI ACCGGT 1 cut(s) 750
CspCI CAANNNNNGTGG 2 cut(s) 2125, 2160
DraI TTTAAA 1 cut(s) 3162
DraIII CACNNNGTG 1 cut(s) 2649
DrdI GACNNNNNNGTC 1 cut(s) 2234
DseDI GACNNNNNNGTC 1 cut(s) 2234
EaeI YGGCCR 2 cut(s) 101, 205
EagI CGGCCG 1 cut(s) 205
Eam1104I CTCTTC 2 cut(s) 24, 2019
EarI CTCTTC 2 cut(s) 24, 2019
EclXI CGGCCG 1 cut(s) 205
Eco130I CCWWGG 3 cut(s) 98, 2822, 3443
Eco24I GRGCYC 1 cut(s) 1943
Eco31I GGTCTC 3 cut(s) 152, 471, 3403
Eco32I GATATC 2 cut(s) 2120, 3230
Eco47I GGWCC 3 cut(s) 1629, 3338, 3751
Eco52I CGGCCG 1 cut(s) 205
Eco57I CTGAAG 5 cut(s) 185, 313, 2646, 3209, 3528
Eco88I CYCGRG 1 cut(s) 468
Eco91I GGTNACC 3 cut(s) 360, 624, 753
EcoNI CCTNNNNNAGG 1 cut(s) 1500
EcoO109I RGGNCCY 3 cut(s) 1629, 1939, 3751
EcoO65I GGTNACC 3 cut(s) 360, 624, 753
EcoRI GAATTC 1 cut(s) 1694
EcoRII CCWGG 4 cut(s) 337, 961, 1648, 3599
EcoRV GATATC 2 cut(s) 2120, 3230
EcoT14I CCWWGG 3 cut(s) 98, 2822, 3443
EcoT22I ATGCAT 5 cut(s) 613, 871, 1841, 2292, 2868
EcoT38I GRGCYC 1 cut(s) 1943
ErhI CCWWGG 3 cut(s) 98, 2822, 3443
Esp3I CGTCTC 1 cut(s) 3062
FaqI GGGAC 5 cut(s) 2574, 3151, 3169, 3737, 3887
FauNDI CATATG 1 cut(s) 1516
FbaI TGATCA 1 cut(s) 1486
FblI GTMKAC 4 cut(s) 43, 1181, 1310, 3222
FriOI GRGCYC 1 cut(s) 1943
GsuI CTGGAG 3 cut(s) 321, 1671, 1749
HaeIII GGCC 7 cut(s) 103, 207, 1941, 2210, 2611, 3962, 4075
HapII CCGG 8 cut(s) 70, 104, 229, 751, 1231, 1360, 2879, 3233
HgaI GACGC 4 cut(s) 29, 116, 122, 1893
Hin1I GRCGYC 1 cut(s) 114
HincII GTYRAC 1 cut(s) 1912
HindII GTYRAC 1 cut(s) 1912
HindIII AAGCTT 2 cut(s) 2910, 3453
HpaII CCGG 8 cut(s) 70, 104, 229, 751, 1231, 1360, 2879, 3233
Hpy99I CGWCG 2 cut(s) 256, 1860
HpyCH4IV ACGT 9 cut(s) 282, 725, 1799, 1893, 1908, 1914, 2687, 2947, 3343
HpyF10VI GCNNNNNNNGC 8 cut(s) 100, 938, 1058, 1226, 1235, 2216, 3704, 4187
HpySE526I ACGT 9 cut(s) 282, 725, 1799, 1893, 1908, 1914, 2687, 2947, 3343
Hsp92I GRCGYC 1 cut(s) 114
KpnI GGTACC 1 cut(s) 2879
Ksp22I TGATCA 1 cut(s) 1486
KspI CCGCGG 1 cut(s) 414
LmnI GCTCC 7 cut(s) 72, 580, 838, 1066, 1447, 1974, 2712
Lsp1109I GCAGC 8 cut(s) 136, 658, 790, 916, 1769, 2231, 2963, 3593
MaeII ACGT 9 cut(s) 282, 725, 1799, 1893, 1908, 1914, 2687, 2947, 3343
MbiI CCGCTC 2 cut(s) 278, 1204
MflI RGATCY 3 cut(s) 1747, 2758, 3511
MhlI GDGCHC 3 cut(s) 1231, 1366, 1943
MlyI GAGTC 2 cut(s) 155, 3496
MmeI TCCRAC 7 cut(s) 613, 865, 871, 1222, 2786, 3173, 3280
Mph1103I ATGCAT 5 cut(s) 613, 871, 1841, 2292, 2868
MroXI GAANNNNTTC 3 cut(s) 1605, 2097, 3522
MslI CAYNNNNRTG 2 cut(s) 2445, 2469
MspA1I CMGCKG 4 cut(s) 413, 1238, 3143, 3584
MspI CCGG 8 cut(s) 70, 104, 229, 751, 1231, 1360, 2879, 3233
MspR9I CCNGG 7 cut(s) 339, 963, 1231, 1361, 1650, 3234, 3601
MvaI CCWGG 4 cut(s) 339, 963, 1650, 3601
MvnI CGCG 3 cut(s) 40, 131, 413
MwoI GCNNNNNNNGC 8 cut(s) 100, 938, 1058, 1226, 1235, 2216, 3704, 4187
NciI CCSGG 3 cut(s) 1231, 1361, 3234
NdeI CATATG 1 cut(s) 1516
NheI GCTAGC 1 cut(s) 3595
NlaIV GGNNCC 5 cut(s) 36, 1365, 1941, 2877, 3753
NmeAIII GCCGAG 1 cut(s) 183
NsiI ATGCAT 5 cut(s) 613, 871, 1841, 2292, 2868
NspI RCATGY 1 cut(s) 2294
PaeI GCATGC 1 cut(s) 2294
PaeR7I CTCGAG 1 cut(s) 468
PagI TCATGA 1 cut(s) 1597
PcsI WCGNNNNNNNCGW 1 cut(s) 2837
PdmI GAANNNNTTC 3 cut(s) 1605, 2097, 3522
PfeI GAWTC 9 cut(s) 1877, 2098, 2423, 2481, 2728, 3038, 3119, 3290, 4036
PflMI CCANNNNNTGG 2 cut(s) 2914, 3772
PinAI ACCGGT 1 cut(s) 750
Ple19I CGATCG 1 cut(s) 4080
PleI GAGTC 2 cut(s) 154, 3495
PpsI GAGTC 2 cut(s) 154, 3495
Ppu21I YACGTR 1 cut(s) 2948
PpuMI RGGWCCY 2 cut(s) 1629, 3751
PshAI GACNNNNGTC 1 cut(s) 3202
PshBI ATTAAT 2 cut(s) 3008, 3815
Psp1406I AACGTT 2 cut(s) 1799, 2687
Psp5II RGGWCCY 2 cut(s) 1629, 3751
Psp6I CCWGG 4 cut(s) 337, 961, 1648, 3599
PspEI GGTNACC 3 cut(s) 360, 624, 753
PspGI CCWGG 4 cut(s) 337, 961, 1648, 3599
PspN4I GGNNCC 5 cut(s) 36, 1365, 1941, 2877, 3753
PspOMI GGGCCC 1 cut(s) 1939
PspPI GGNCC 5 cut(s) 1629, 1939, 1940, 3338, 3751
PspPPI RGGWCCY 2 cut(s) 1629, 3751
PsrI GAACNNNNNNTAC 2 cut(s) 3773, 3805
PstI CTGCAG 3 cut(s) 676, 808, 934
PsuI RGATCY 3 cut(s) 1747, 2758, 3511
PvuI CGATCG 1 cut(s) 4080
PvuII CAGCTG 3 cut(s) 1238, 3143, 3584
RseI CAYNNNNRTG 2 cut(s) 2445, 2469
SacII CCGCGG 1 cut(s) 414
Sau96I GGNCC 5 cut(s) 1629, 1939, 1940, 3338, 3751
ScaI AGTACT 1 cut(s) 2815
SchI GAGTC 2 cut(s) 155, 3496
ScrFI CCNGG 7 cut(s) 339, 963, 1231, 1361, 1650, 3234, 3601
SduI GDGCHC 3 cut(s) 1231, 1366, 1943
SfcI CTRYAG 5 cut(s) 672, 804, 930, 1973, 3223
Sfr274I CTCGAG 1 cut(s) 468
Sfr303I CCGCGG 1 cut(s) 414
SgrBI CCGCGG 1 cut(s) 414
SinI GGWCC 3 cut(s) 1629, 3338, 3751
SlaI CTCGAG 1 cut(s) 468
SmiMI CAYNNNNRTG 2 cut(s) 2445, 2469
SmlI CTYRAG 3 cut(s) 468, 2582, 3400
SmoI CTYRAG 3 cut(s) 468, 2582, 3400
SpeI ACTAGT 1 cut(s) 3217
SphI GCATGC 1 cut(s) 2294
SspI AATATT 1 cut(s) 1784
StyD4I CCNGG 7 cut(s) 337, 961, 1229, 1359, 1648, 3232, 3599
StyI CCWWGG 3 cut(s) 98, 2822, 3443
TaiI ACGT 9 cut(s) 285, 728, 1802, 1896, 1911, 1917, 2690, 2950, 3346
TaqII GACCGA 1 cut(s) 612
TatI WGTACW 6 cut(s) 580, 709, 1318, 1588, 2813, 3945
TauI GCSGC 6 cut(s) 40, 134, 413, 545, 1415, 2116
TfiI GAWTC 9 cut(s) 1877, 2098, 2423, 2481, 2728, 3038, 3119, 3290, 4036
TscAI CASTG 2 cut(s) 2654, 2677
TseI GCWGC 8 cut(s) 124, 671, 803, 929, 1757, 2219, 2951, 3581
TspGWI ACGGA 4 cut(s) 240, 870, 1688, 3793
TspRI CASTG 2 cut(s) 2654, 2677
Van91I CCANNNNNTGG 2 cut(s) 2914, 3772
VpaK11BI GGWCC 3 cut(s) 1629, 3338, 3751
VspI ATTAAT 2 cut(s) 3008, 3815
XagI CCTNNNNNAGG 1 cut(s) 1500
XapI RAATTY 4 cut(s) 1694, 1812, 1864, 2885
XbaI TCTAGA 4 cut(s) 952, 3031, 3514, 3700
XceI RCATGY 1 cut(s) 2294
XcmI CCANNNNNNNNNTGG 1 cut(s) 3441
XhoI CTCGAG 1 cut(s) 468
XmaJI CCTAGG 1 cut(s) 2822
XmiI GTMKAC 4 cut(s) 43, 1181, 1310, 3222
XmnI GAANNNNTTC 3 cut(s) 1605, 2097, 3522
ZrmI AGTACT 1 cut(s) 2815
Zsp2I ATGCAT 5 cut(s) 613, 871, 1841, 2292, 2868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.