Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 229 |
| Acc36I | ACCTGC | 1 cut(s) | 229 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 189 |
| AclWI | GGATC | 1 cut(s) | 453 |
| AdeI | CACNNNGTG | 1 cut(s) | 79 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 189 |
| AflII | CTTAAG | 1 cut(s) | 404 |
| AgsI | TTSAA | 1 cut(s) | 395 |
| AleI | CACNNNNGTG | 1 cut(s) | 341 |
| AluBI | AGCT | 5 cut(s) | 40, 67, 291, 428, 477 |
| AluI | AGCT | 5 cut(s) | 40, 67, 291, 428, 477 |
| Alw21I | GWGCWC | 2 cut(s) | 171, 220 |
| AlwI | GGATC | 1 cut(s) | 453 |
| AoxI | GGCC | 1 cut(s) | 239 |
| AspS9I | GGNCC | 1 cut(s) | 240 |
| AsuNHI | GCTAGC | 1 cut(s) | 287 |
| Bbv12I | GWGCWC | 2 cut(s) | 171, 220 |
| BfaI | CTAG | 5 cut(s) | 288, 303, 348, 381, 399 |
| BfmI | CTRYAG | 1 cut(s) | 222 |
| BfrI | CTTAAG | 1 cut(s) | 404 |
| BfuAI | ACCTGC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 1 cut(s) | 240 |
| BmtI | GCTAGC | 1 cut(s) | 291 |
| BpmI | CTGGAG | 2 cut(s) | 344, 414 |
| BpuEI | CTTGAG | 2 cut(s) | 20, 47 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 401, 412, 431, 442 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 189 |
| Bse118I | RCCGGY | 1 cut(s) | 360 |
| Bse3DI | GCAATG | 1 cut(s) | 273 |
| BseGI | GGATG | 1 cut(s) | 24 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 189 |
| BseMI | GCAATG | 1 cut(s) | 273 |
| BsgI | GTGCAG | 1 cut(s) | 196 |
| BshFI | GGCC | 1 cut(s) | 241 |
| BsiHKAI | GWGCWC | 2 cut(s) | 171, 220 |
| BsiSI | CCGG | 1 cut(s) | 361 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 189 |
| BsnI | GGCC | 1 cut(s) | 241 |
| Bsp1286I | GDGCHC | 2 cut(s) | 171, 220 |
| Bsp143I | GATC | 2 cut(s) | 333, 445 |
| BspANI | GGCC | 1 cut(s) | 241 |
| BspMAI | CTGCAG | 1 cut(s) | 226 |
| BspMI | ACCTGC | 1 cut(s) | 229 |
| BspOI | GCTAGC | 1 cut(s) | 291 |
| BspPI | GGATC | 1 cut(s) | 453 |
| BspTI | CTTAAG | 1 cut(s) | 404 |
| BsrDI | GCAATG | 1 cut(s) | 273 |
| BsrFI | RCCGGY | 1 cut(s) | 360 |
| BssAI | RCCGGY | 1 cut(s) | 360 |
| BssMI | GATC | 2 cut(s) | 333, 445 |
| BstAFI | CTTAAG | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 3 cut(s) | 159, 289, 366 |
| BstDEI | CTNAG | 1 cut(s) | 473 |
| BstF5I | GGATG | 1 cut(s) | 24 |
| BstKTI | GATC | 2 cut(s) | 336, 448 |
| BstMBI | GATC | 2 cut(s) | 333, 445 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 284 |
| BstSFI | CTRYAG | 1 cut(s) | 222 |
| BstX2I | RGATCY | 1 cut(s) | 445 |
| BstYI | RGATCY | 1 cut(s) | 445 |
| BsuRI | GGCC | 1 cut(s) | 241 |
| BtsCI | GGATG | 1 cut(s) | 24 |
| BtsI | GCAGTG | 1 cut(s) | 184 |
| BtsIMutI | CAGTG | 1 cut(s) | 184 |
| BveI | ACCTGC | 1 cut(s) | 229 |
| Cac8I | GCNNGC | 3 cut(s) | 159, 289, 366 |
| Cfr10I | RCCGGY | 1 cut(s) | 360 |
| Cfr13I | GGNCC | 1 cut(s) | 240 |
| CviAII | CATG | 3 cut(s) | 172, 184, 189 |
| DdeI | CTNAG | 1 cut(s) | 473 |
| DpnI | GATC | 2 cut(s) | 335, 447 |
| DpnII | GATC | 2 cut(s) | 333, 445 |
| DraI | TTTAAA | 1 cut(s) | 153 |
| DraIII | CACNNNGTG | 1 cut(s) | 79 |
| FaeI | CATG | 3 cut(s) | 175, 187, 192 |
| FaiI | YATR | 8 cut(s) | 115, 139, 173, 185, 190, 294, 372, 386 |
| FatI | CATG | 3 cut(s) | 171, 183, 188 |
| FokI | GGATG | 1 cut(s) | 31 |
| FspBI | CTAG | 5 cut(s) | 288, 303, 348, 381, 399 |
| GsuI | CTGGAG | 2 cut(s) | 344, 414 |
| HaeIII | GGCC | 1 cut(s) | 241 |
| HapII | CCGG | 1 cut(s) | 361 |
| Hin1II | CATG | 3 cut(s) | 175, 187, 192 |
| HindIII | AAGCTT | 2 cut(s) | 38, 65 |
| HinfI | GANTC | 1 cut(s) | 395 |
| HpaII | CCGG | 1 cut(s) | 361 |
| Hpy166II | GTNNAC | 1 cut(s) | 420 |
| Hpy188I | TCNGA | 2 cut(s) | 333, 450 |
| Hpy188III | TCNNGA | 2 cut(s) | 323, 431 |
| Hpy8I | GTNNAC | 1 cut(s) | 420 |
| HpyCH4IV | ACGT | 1 cut(s) | 353 |
| HpyCH4V | TGCA | 4 cut(s) | 177, 224, 357, 368 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 284 |
| HpyF3I | CTNAG | 1 cut(s) | 473 |
| HpySE526I | ACGT | 1 cut(s) | 353 |
| Hsp92II | CATG | 3 cut(s) | 175, 187, 192 |
| Kzo9I | GATC | 2 cut(s) | 333, 445 |
| LmnI | GCTCC | 1 cut(s) | 433 |
| LpnPI | CCDG | 5 cut(s) | 171, 234, 308, 374, 444 |
| MaeI | CTAG | 5 cut(s) | 288, 303, 348, 381, 399 |
| MaeII | ACGT | 1 cut(s) | 353 |
| MalI | GATC | 2 cut(s) | 335, 447 |
| MboI | GATC | 2 cut(s) | 333, 445 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MflI | RGATCY | 1 cut(s) | 445 |
| MhlI | GDGCHC | 2 cut(s) | 171, 220 |
| MluCI | AATT | 2 cut(s) | 89, 102 |
| MmeI | TCCRAC | 1 cut(s) | 236 |
| MnlI | CCTC | 6 cut(s) | 44, 71, 190, 273, 319, 403 |
| MseI | TTAA | 7 cut(s) | 9, 42, 69, 84, 152, 405, 464 |
| MslI | CAYNNNNRTG | 1 cut(s) | 341 |
| MspA1I | CMGCKG | 1 cut(s) | 477 |
| MspCI | CTTAAG | 1 cut(s) | 404 |
| MspI | CCGG | 1 cut(s) | 361 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 284 |
| NdeII | GATC | 2 cut(s) | 333, 445 |
| NheI | GCTAGC | 1 cut(s) | 287 |
| NlaIII | CATG | 3 cut(s) | 175, 187, 192 |
| OliI | CACNNNNGTG | 1 cut(s) | 341 |
| PaqCI | CACCTGC | 1 cut(s) | 229 |
| PfeI | GAWTC | 1 cut(s) | 395 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 189 |
| PspPI | GGNCC | 1 cut(s) | 240 |
| PstI | CTGCAG | 1 cut(s) | 226 |
| PsuI | RGATCY | 1 cut(s) | 445 |
| PvuII | CAGCTG | 1 cut(s) | 477 |
| RseI | CAYNNNNRTG | 1 cut(s) | 341 |
| SaqAI | TTAA | 7 cut(s) | 9, 42, 69, 84, 152, 405, 464 |
| Sau3AI | GATC | 2 cut(s) | 333, 445 |
| Sau96I | GGNCC | 1 cut(s) | 240 |
| SduI | GDGCHC | 2 cut(s) | 171, 220 |
| SfcI | CTRYAG | 1 cut(s) | 222 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 341 |
| SmlI | CTYRAG | 3 cut(s) | 35, 62, 404 |
| SmoI | CTYRAG | 3 cut(s) | 35, 62, 404 |
| Sse9I | AATT | 2 cut(s) | 89, 102 |
| SspMI | CTAG | 5 cut(s) | 288, 303, 348, 381, 399 |
| TaiI | ACGT | 1 cut(s) | 356 |
| TasI | AATT | 2 cut(s) | 89, 102 |
| TfiI | GAWTC | 1 cut(s) | 395 |
| Tru1I | TTAA | 7 cut(s) | 9, 42, 69, 84, 152, 405, 464 |
| Tru9I | TTAA | 7 cut(s) | 9, 42, 69, 84, 152, 405, 464 |
| TscAI | CASTG | 1 cut(s) | 184 |
| TspGWI | ACGGA | 1 cut(s) | 458 |
| TspRI | CASTG | 1 cut(s) | 184 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 189 |
| Vha464I | CTTAAG | 1 cut(s) | 404 |
| XspI | CTAG | 5 cut(s) | 288, 303, 348, 381, 399 |