Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 258 |
| AgsI | TTSAA | 3 cut(s) | 98, 134, 234 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 126 |
| AluBI | AGCT | 2 cut(s) | 137, 155 |
| AluI | AGCT | 2 cut(s) | 137, 155 |
| Alw21I | GWGCWC | 1 cut(s) | 210 |
| Alw26I | GTCTC | 1 cut(s) | 113 |
| ApeKI | GCWGC | 2 cut(s) | 137, 155 |
| AseI | ATTAAT | 1 cut(s) | 35 |
| BbsI | GAAGAC | 1 cut(s) | 122 |
| Bbv12I | GWGCWC | 1 cut(s) | 210 |
| BbvI | GCAGC | 2 cut(s) | 124, 142 |
| BccI | CCATC | 1 cut(s) | 232 |
| BclI | TGATCA | 1 cut(s) | 322 |
| BcoDI | GTCTC | 1 cut(s) | 113 |
| BfaI | CTAG | 2 cut(s) | 249, 278 |
| BfmI | CTRYAG | 1 cut(s) | 212 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 296 |
| BisI | GCNGC | 2 cut(s) | 138, 156 |
| BlsI | GCNGC | 2 cut(s) | 139, 157 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 126 |
| BmiI | GGNNCC | 1 cut(s) | 84 |
| BpiI | GAAGAC | 1 cut(s) | 122 |
| Bse1I | ACTGG | 2 cut(s) | 86, 177 |
| Bse3DI | GCAATG | 1 cut(s) | 285 |
| BseGI | GGATG | 1 cut(s) | 352 |
| BseMI | GCAATG | 1 cut(s) | 285 |
| BseNI | ACTGG | 2 cut(s) | 86, 177 |
| BseXI | GCAGC | 2 cut(s) | 124, 142 |
| BsiHKAI | GWGCWC | 1 cut(s) | 210 |
| BsmAI | GTCTC | 1 cut(s) | 113 |
| Bsp1286I | GDGCHC | 1 cut(s) | 210 |
| Bsp143I | GATC | 2 cut(s) | 114, 322 |
| BspLI | GGNNCC | 1 cut(s) | 84 |
| BsrDI | GCAATG | 1 cut(s) | 285 |
| BsrI | ACTGG | 2 cut(s) | 86, 177 |
| BssMI | GATC | 2 cut(s) | 114, 322 |
| Bst4CI | ACNGT | 2 cut(s) | 128, 216 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 287 |
| BstC8I | GCNNGC | 1 cut(s) | 301 |
| BstF5I | GGATG | 1 cut(s) | 352 |
| BstKTI | GATC | 2 cut(s) | 117, 325 |
| BstMAI | GTCTC | 1 cut(s) | 113 |
| BstMBI | GATC | 2 cut(s) | 114, 322 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 287, 296 |
| BstSFI | CTRYAG | 1 cut(s) | 212 |
| BstV1I | GCAGC | 2 cut(s) | 124, 142 |
| BstV2I | GAAGAC | 1 cut(s) | 122 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 75 |
| BtgZI | GCGATG | 1 cut(s) | 257 |
| BtsCI | GGATG | 1 cut(s) | 352 |
| Cac8I | GCNNGC | 1 cut(s) | 301 |
| CviAII | CATG | 3 cut(s) | 164, 220, 242 |
| CviJI | RGCY | 4 cut(s) | 137, 155, 186, 269 |
| CviKI_1 | RGCY | 4 cut(s) | 137, 155, 186, 269 |
| DpnI | GATC | 2 cut(s) | 116, 324 |
| DpnII | GATC | 2 cut(s) | 114, 322 |
| DriI | GACNNNNNGTC | 1 cut(s) | 126 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 126 |
| Eco32I | GATATC | 1 cut(s) | 148 |
| EcoRV | GATATC | 1 cut(s) | 148 |
| FaeI | CATG | 3 cut(s) | 167, 223, 245 |
| FaiI | YATR | 6 cut(s) | 165, 221, 243, 258, 294, 344 |
| FatI | CATG | 3 cut(s) | 163, 219, 241 |
| FbaI | TGATCA | 1 cut(s) | 322 |
| Fnu4HI | GCNGC | 2 cut(s) | 138, 156 |
| FokI | GGATG | 1 cut(s) | 359 |
| Fsp4HI | GCNGC | 2 cut(s) | 138, 156 |
| FspBI | CTAG | 2 cut(s) | 249, 278 |
| GluI | GCNGC | 2 cut(s) | 138, 156 |
| Hin1II | CATG | 3 cut(s) | 167, 223, 245 |
| Hpy188III | TCNNGA | 1 cut(s) | 118 |
| HpyCH4III | ACNGT | 2 cut(s) | 128, 216 |
| HpyCH4V | TGCA | 2 cut(s) | 31, 158 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 287, 296 |
| Hsp92II | CATG | 3 cut(s) | 167, 223, 245 |
| Ksp22I | TGATCA | 1 cut(s) | 322 |
| Kzo9I | GATC | 2 cut(s) | 114, 322 |
| LmnI | GCTCC | 2 cut(s) | 213, 250 |
| LpnPI | CCDG | 3 cut(s) | 99, 158, 345 |
| Lsp1109I | GCAGC | 2 cut(s) | 124, 142 |
| MaeI | CTAG | 2 cut(s) | 249, 278 |
| MaeIII | GTNAC | 1 cut(s) | 365 |
| MalI | GATC | 2 cut(s) | 116, 324 |
| MboI | GATC | 2 cut(s) | 114, 322 |
| MboII | GAAGA | 1 cut(s) | 122 |
| MhlI | GDGCHC | 1 cut(s) | 210 |
| MluCI | AATT | 5 cut(s) | 9, 32, 36, 99, 234 |
| MnlI | CCTC | 4 cut(s) | 172, 176, 289, 381 |
| MseI | TTAA | 4 cut(s) | 35, 111, 188, 354 |
| MslI | CAYNNNNRTG | 2 cut(s) | 203, 334 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 287, 296 |
| NdeII | GATC | 2 cut(s) | 114, 322 |
| NlaIII | CATG | 3 cut(s) | 167, 223, 245 |
| NlaIV | GGNNCC | 1 cut(s) | 84 |
| PkrI | GCNGC | 2 cut(s) | 139, 157 |
| PshBI | ATTAAT | 1 cut(s) | 35 |
| PsiI | TTATAA | 1 cut(s) | 258 |
| PspN4I | GGNNCC | 1 cut(s) | 84 |
| RseI | CAYNNNNRTG | 2 cut(s) | 203, 334 |
| SaqAI | TTAA | 4 cut(s) | 35, 111, 188, 354 |
| SatI | GCNGC | 2 cut(s) | 138, 156 |
| Sau3AI | GATC | 2 cut(s) | 114, 322 |
| SduI | GDGCHC | 1 cut(s) | 210 |
| SetI | ASST | 4 cut(s) | 139, 157, 207, 334 |
| SfcI | CTRYAG | 1 cut(s) | 212 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 203, 334 |
| Sse9I | AATT | 5 cut(s) | 9, 32, 36, 99, 234 |
| SspMI | CTAG | 2 cut(s) | 249, 278 |
| TaaI | ACNGT | 2 cut(s) | 128, 216 |
| TaqI | TCGA | 1 cut(s) | 117 |
| TasI | AATT | 5 cut(s) | 9, 32, 36, 99, 234 |
| Tru1I | TTAA | 4 cut(s) | 35, 111, 188, 354 |
| Tru9I | TTAA | 4 cut(s) | 35, 111, 188, 354 |
| TseI | GCWGC | 2 cut(s) | 137, 155 |
| TspDTI | ATGAA | 2 cut(s) | 75, 180 |
| TspGWI | ACGGA | 1 cut(s) | 21 |
| VspI | ATTAAT | 1 cut(s) | 35 |
| XspI | CTAG | 2 cut(s) | 249, 278 |