Rorug02G0284700

zinc-binding in reverse transcriptase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000519
Physical Location & Seq
Reverse (-)
30984288 .. 30993485
9198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0284700.1

Sequence Viewer

Length: 1344 bp
ATGGACCTCCTTTCAGTTCCTTCTTCGCCGTCTTTGGCCGGGAATGTGTTGTTTTTGGCACGGCAGCGTTTTTGCAACTGGAGGAGTCCTGAAAGACTTCACTTGGATGCAATATTTGCAACAGATGGAATTTTGTATAAGAATTTGCGAAGAGGAAGGGGATGTTTCTCCAAAACAACAGAAGCTTCTAGTTCTTTTTCAAATGGTACTGGCCATGGAGAAAGTCCATACATACCCATTAATACAAAACCAAGTGATGCACGTATAATTTATGCTGTAGCTCCTGCCATGGGTCATAACCAGGAGGCTCATCCAGAATCTCACTTTAGAGTTCCTGCTATAGTGCAGGCTCTTGACAAATTGGAGCTCACACCAAAGTTCCGTGGCTCGAAGGTTATTGAACTTCAAAAATTTAGGCCAGCATCAGTGGATGACATCACAAGTGTTCATACTCAATCATATGTATCAGGCCTTGAAAAGGCTATGGATCAAGCCTCAAAAGACGGCCTTATTTTTATAGAAGGCTCTGGACCAACATATGCAACTGTTGAGACATTCCAGGAGTCAATGATTGCAGCTGGAGCAGGAATTGCCTTAATTGATTCAGTGGTAGCAGAGTCAAAGAACAGCAGGGATCCACCTACTGGTTTTGCTTTAATAAGACCTCCAGGACACCATGCAATTCCAAAGGGTCCGATGGGGTTTTGTGTGTTTGGAAATATTGCTATTGCAGCTCGTTATGCTCAGCGTGCACATGGCTTGAAGCGTGTCTTTATAATTGATTTTGATGTTCACCACGGGAATGGGACAAATGATGCTTTCTATGAGGATCCAGATATATTCTTCCTTTCAACTCACCAAGATGGGAGTTACCCTGGTACTGGAAAATTTGATGAGATAGGTCGCGGAGATGGCGAAGGAACGACACTAAATCTTCCTCTACCAGGTGGCTCAGGTGATACTGCCATGAGAACTGTGTTTGATGAAGTAATTGTGCCATGTGCTCAAAGGTTTAAGCCAGATATTATTCTCGTCTCTGCTGGGTATGATGCGCATGCATTGGATCCACTTGCAAGTTTGCAATTTACAACTGGAACATATTACATGCTAGCATCTAGTATTCAACAACTTGCCAAGGATATTTGTGGTGGTCGATGCGTGTTTTTCTTAGAAGGAGGATACAATCTCGACTCTCTTTCATATTCCGTTGCAGATTCATTTCGTGCTTTTCTTAAAGAGCCAAGTTTGGCGTCTACGTTTGACAACCCTGCCATGTTGTATGAAGAGCCATCAATGAAGGTTAAGCAGGCAATTCAGAGGGTTAAACATTTACATTCTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

447

Amino Acids

48.57

Weight (kDa)

6.1

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 104 - 408 1.6e-90 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000519)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g27751 FvH4_2g10620 FvH4_4g13701 FvH4_4g17370 FvH4_6g49051
pyrus_communis pycom11g18020
rosa_chinensis RchiOBHm_Chr1g0331041 RchiOBHm_Chr2g0088901 RchiOBHm_Chr2g0100641 RchiOBHm_Chr6g0281891
rosa_laevigata RLG00000011791 RLG00000028155 RLG00000035981
rosa_multiflora Rmu_co8368635.1_g000001 Rmu_co8370105.1_g000001 Rmu_sc0000850.1_g000010 Rmu_sc0001374.1_g000060 Rmu_sc0001654.1_g000024 Rmu_sc0001840.1_g000023 Rmu_sc0001900.1_g000032 Rmu_sc0002687.1_g000008 Rmu_sc0003133.1_g000026 Rmu_sc0003252.1_g000002 Rmu_sc0004206.1_g000011 Rmu_sc0004666.1_g000002 Rmu_sc0006255.1_g000004 Rmu_sc0006812.1_g000001 Rmu_sc0007025.1_g000012 Rmu_sc0007767.1_g000020 Rmu_sc0007833.1_g000004 Rmu_sc0007848.1_g000020 Rmu_sc0007883.1_g000010 Rmu_sc0008270.1_g000003 Rmu_sc0012097.1_g000011 Rmu_sc0014445.1_g000002 Rmu_sc0023292.1_g000001
rosa_roxburghii Rroxscaffold_1G00021670 Rroxscaffold_1G00027660 Rroxscaffold_1G00056090 Rroxscaffold_2G00111250 Rroxscaffold_2G00111320 Rroxscaffold_3G00248390 Rroxscaffold_6G00394880 Rroxscaffold_7G00192450
rosa_rugosa Rorug01G0071500 Rorug01G0183900 Rorug01G0242400 Rorug02G0045300 Rorug02G0051000 Rorug02G0061700 Rorug02G0091500 Rorug02G0091600 Rorug02G0091700 Rorug02G0091800 Rorug02G0284700 Rorug02G0335100 Rorug02G0336900 Rorug02G0405500.1 Rorug02G0498300 Rorug03G0173700 Rorug03G0228900 Rorug03G0256300 Rorug04G0014300 Rorug04G0130400 Rorug04G0138100 Rorug04G0138100 Rorug04G0150400.1 Rorug05G0000600 Rorug05G0160400 Rorug05G0165600 Rorug05G0378500 Rorug06G0072000 Rorug06G0107900 Rorug06G0268700 Rorug07G0015500 Rorug07G0266300 Rorug07G0274500
rosa_samantha Rh2AG439400 Rh2AG561100 Rh2DG459400 Rh3AG236100 Rh4BG212500 Rh6AG046300 Rh6BG073000 Rh7DG249100
rosa_wichuraiana Rw2G010910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 776
Acc16I TGCGCA 1 cut(s) 1053
AccB7I CCANNNNNTGG 1 cut(s) 644
AccI GTMKAC 1 cut(s) 1253
AccII CGCG 1 cut(s) 906
AciI CCGC 1 cut(s) 906
AclWI GGATC 7 cut(s) 495, 629, 642, 824, 837, 1058, 1071
AcoI YGGCCR 2 cut(s) 36, 211
AcsI RAATTY 4 cut(s) 129, 142, 410, 887
AcyI GRCGYC 1 cut(s) 1250
AfaI GTAC 2 cut(s) 208, 880
AfiI CCNNNNNNNGG 5 cut(s) 290, 478, 644, 881, 944
AgsI TTSAA 7 cut(s) 201, 401, 407, 476, 763, 852, 1124
AjnI CCWGG 5 cut(s) 300, 558, 667, 874, 943
AluBI AGCT 5 cut(s) 185, 281, 367, 578, 734
AluI AGCT 5 cut(s) 185, 281, 367, 578, 734
Alw21I GWGCWC 3 cut(s) 369, 754, 1006
Alw26I GTCTC 2 cut(s) 545, 1039
Alw44I GTGCAC 1 cut(s) 750
AlwI GGATC 7 cut(s) 495, 629, 642, 824, 837, 1058, 1071
AoxI GGCC 5 cut(s) 36, 211, 416, 469, 505
ApaLI GTGCAC 1 cut(s) 750
ApeKI GCWGC 3 cut(s) 64, 575, 731
ApoI RAATTY 4 cut(s) 129, 142, 410, 887
AseI ATTAAT 1 cut(s) 240
Asp700I GAANNNNTTC 1 cut(s) 96
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 3 cut(s) 4, 530, 692
AsuC2I CCSGG 1 cut(s) 40
AsuHPI GGTGA 3 cut(s) 785, 848, 968
AsuNHI GCTAGC 1 cut(s) 1108
AvaII GGWCC 3 cut(s) 4, 530, 692
BaeGI GKGCMC 1 cut(s) 754
BalI TGGCCA 1 cut(s) 213
BamHI GGATCC 3 cut(s) 634, 829, 1063
BanII GRGCYC 1 cut(s) 369
Bbv12I GWGCWC 3 cut(s) 369, 754, 1006
BbvI GCAGC 3 cut(s) 76, 587, 743
BccI CCATC 5 cut(s) 119, 691, 857, 905, 1297
BceAI ACGGC 3 cut(s) 13, 77, 520
BciT130I CCWGG 5 cut(s) 302, 560, 669, 876, 945
BciVI GTATCC 1 cut(s) 1172
BcnI CCSGG 1 cut(s) 40
BcoDI GTCTC 2 cut(s) 545, 1039
BfaI CTAG 3 cut(s) 189, 1109, 1116
BfmI CTRYAG 2 cut(s) 276, 339
BfuI GTATCC 1 cut(s) 1172
BisI GCNGC 3 cut(s) 65, 576, 732
BlpI GCTNAGC 1 cut(s) 744
BlsI GCNGC 3 cut(s) 66, 577, 733
Bme1390I CCNGG 6 cut(s) 40, 302, 560, 669, 876, 945
Bme18I GGWCC 3 cut(s) 4, 530, 692
BmgT120I GGNCC 3 cut(s) 4, 530, 692
BmiI GGNNCC 4 cut(s) 636, 693, 831, 1065
BmrFI CCNGG 6 cut(s) 40, 302, 560, 669, 876, 945
BmsI GCATC 7 cut(s) 97, 247, 431, 805, 1039, 1121, 1145
BmtI GCTAGC 1 cut(s) 1112
BpmI CTGGAG 3 cut(s) 100, 600, 651
Bpu10I CCTNAGC 1 cut(s) 952
Bpu1102I GCTNAGC 1 cut(s) 744
BpuMI CCSGG 1 cut(s) 40
BsaAI YACGTR 1 cut(s) 263
BsaHI GRCGYC 1 cut(s) 1250
BsaJI CCNNGG 6 cut(s) 214, 288, 382, 796, 874, 1134
Bsc4I CCNNNNNNNGG 5 cut(s) 290, 478, 644, 881, 944
Bse1I ACTGG 5 cut(s) 83, 214, 649, 886, 1096
BseBI CCWGG 5 cut(s) 302, 560, 669, 876, 945
BseDI CCNNGG 6 cut(s) 214, 288, 382, 796, 874, 1134
BseGI GGATG 4 cut(s) 112, 167, 310, 436
BseLI CCNNNNNNNGG 5 cut(s) 290, 478, 644, 881, 944
BseMII CTCAG 2 cut(s) 758, 966
BseNI ACTGG 5 cut(s) 83, 214, 649, 886, 1096
BseRI GAGGAG 1 cut(s) 97
BseSI GKGCMC 1 cut(s) 754
BseXI GCAGC 3 cut(s) 76, 587, 743
BseYI CCCAGC 1 cut(s) 1040
BsgI GTGCAG 1 cut(s) 365
Bsh1236I CGCG 1 cut(s) 906
BshFI GGCC 5 cut(s) 38, 213, 418, 471, 507
BsiHKAI GWGCWC 3 cut(s) 369, 754, 1006
BsiSI CCGG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 820
BslI CCNNNNNNNGG 5 cut(s) 290, 478, 644, 881, 944
BsmAI GTCTC 2 cut(s) 545, 1039
BsmBI CGTCTC 1 cut(s) 1039
BsmFI GGGAC 1 cut(s) 820
BsnI GGCC 5 cut(s) 38, 213, 418, 471, 507
Bsp1286I GDGCHC 3 cut(s) 369, 754, 1006
Bsp143I GATC 4 cut(s) 487, 634, 829, 1063
Bsp1720I GCTNAGC 1 cut(s) 744
Bsp19I CCATGG 2 cut(s) 214, 288
BspACI CCGC 1 cut(s) 906
BspANI GGCC 5 cut(s) 38, 213, 418, 471, 507
BspCNI CTCAG 2 cut(s) 757, 965
BspFNI CGCG 1 cut(s) 906
BspLI GGNNCC 4 cut(s) 636, 693, 831, 1065
BspOI GCTAGC 1 cut(s) 1112
BspPI GGATC 7 cut(s) 495, 629, 642, 824, 837, 1058, 1071
BspQI GCTCTTC 1 cut(s) 1278
BsrI ACTGG 5 cut(s) 83, 214, 649, 886, 1096
BssECI CCNNGG 6 cut(s) 214, 288, 382, 796, 874, 1134
BssMI GATC 4 cut(s) 487, 634, 829, 1063
BssNI GRCGYC 1 cut(s) 1250
BssT1I CCWWGG 3 cut(s) 214, 288, 1134
Bst2UI CCWGG 5 cut(s) 302, 560, 669, 876, 945
Bst4CI ACNGT 2 cut(s) 547, 976
Bst6I CTCTTC 2 cut(s) 145, 1278
BstACI GRCGYC 1 cut(s) 1250
BstAPI GCANNNNNTGC 2 cut(s) 116, 590
BstBAI YACGTR 1 cut(s) 263
BstC8I GCNNGC 6 cut(s) 348, 420, 750, 1056, 1110, 1308
BstDEI CTNAG 3 cut(s) 744, 952, 1168
BstDSI CCRYGG 4 cut(s) 214, 288, 382, 796
BstENI CCTNNNNNAGG 2 cut(s) 476, 942
BstF5I GGATG 4 cut(s) 112, 167, 310, 436
BstFNI CGCG 1 cut(s) 906
BstHHI GCGC 1 cut(s) 1054
BstKTI GATC 4 cut(s) 490, 637, 832, 1066
BstMAI GTCTC 2 cut(s) 545, 1039
BstMBI GATC 4 cut(s) 487, 634, 829, 1063
BstMWI GCNNNNNNNGC 7 cut(s) 116, 581, 590, 731, 740, 749, 912
BstNI CCWGG 5 cut(s) 302, 560, 669, 876, 945
BstNSI RCATGY 2 cut(s) 1058, 1108
BstSCI CCNGG 6 cut(s) 38, 300, 558, 667, 874, 943
BstSFI CTRYAG 2 cut(s) 276, 339
BstSLI GKGCMC 1 cut(s) 754
BstUI CGCG 1 cut(s) 906
BstV1I GCAGC 3 cut(s) 76, 587, 743
BstX2I RGATCY 3 cut(s) 634, 829, 1063
BstXI CCANNNNNNTGG 1 cut(s) 803
BstYI RGATCY 3 cut(s) 634, 829, 1063
BsuI GTATCC 1 cut(s) 1172
BsuRI GGCC 5 cut(s) 38, 213, 418, 471, 507
BtgI CCRYGG 4 cut(s) 214, 288, 382, 796
BtsCI GGATG 4 cut(s) 112, 167, 310, 436
BtsIMutI CAGTG 2 cut(s) 432, 612
Cac8I GCNNGC 6 cut(s) 348, 420, 750, 1056, 1110, 1308
CfoI GCGC 1 cut(s) 1054
Cfr13I GGNCC 3 cut(s) 4, 530, 692
CseI GACGC 1 cut(s) 1239
CsiI ACCWGGT 1 cut(s) 943
Csp6I GTAC 2 cut(s) 207, 879
CviAII CATG 9 cut(s) 215, 289, 677, 755, 967, 999, 1055, 1105, 1273
CviQI GTAC 2 cut(s) 207, 879
DdeI CTNAG 3 cut(s) 744, 952, 1168
DpnI GATC 4 cut(s) 489, 636, 831, 1065
DpnII GATC 4 cut(s) 487, 634, 829, 1063
EaeI YGGCCR 2 cut(s) 36, 211
Eam1104I CTCTTC 2 cut(s) 145, 1278
EarI CTCTTC 2 cut(s) 145, 1278
Ecl136II GAGCTC 1 cut(s) 367
Eco130I CCWWGG 3 cut(s) 214, 288, 1134
Eco147I AGGCCT 1 cut(s) 471
Eco24I GRGCYC 1 cut(s) 369
Eco47I GGWCC 3 cut(s) 4, 530, 692
Eco53kI GAGCTC 1 cut(s) 367
EcoICRI GAGCTC 1 cut(s) 367
EcoNI CCTNNNNNAGG 2 cut(s) 476, 942
EcoRII CCWGG 5 cut(s) 300, 558, 667, 874, 943
EcoT14I CCWWGG 3 cut(s) 214, 288, 1134
EcoT22I ATGCAT 1 cut(s) 1060
EcoT38I GRGCYC 1 cut(s) 369
ErhI CCWWGG 3 cut(s) 214, 288, 1134
Esp3I CGTCTC 1 cut(s) 1039
FaeI CATG 9 cut(s) 218, 292, 680, 758, 970, 1002, 1058, 1108, 1276
FalI AAGNNNNNCTT 4 cut(s) 492, 524, 755, 787
FaqI GGGAC 1 cut(s) 820
FatI CATG 9 cut(s) 214, 288, 676, 754, 966, 998, 1054, 1104, 1272
FauNDI CATATG 2 cut(s) 460, 538
FblI GTMKAC 1 cut(s) 1253
Fnu4HI GCNGC 3 cut(s) 65, 576, 732
FokI GGATG 4 cut(s) 119, 174, 297, 443
FriOI GRGCYC 1 cut(s) 369
Fsp4HI GCNGC 3 cut(s) 65, 576, 732
FspAI RTGCGCAY 1 cut(s) 1053
FspBI CTAG 3 cut(s) 189, 1109, 1116
FspI TGCGCA 1 cut(s) 1053
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 3 cut(s) 65, 576, 732
GsaI CCCAGC 1 cut(s) 1044
GsuI CTGGAG 3 cut(s) 100, 600, 651
HaeIII GGCC 5 cut(s) 38, 213, 418, 471, 507
HapII CCGG 1 cut(s) 39
HgaI GACGC 1 cut(s) 1239
HhaI GCGC 1 cut(s) 1054
Hin1I GRCGYC 1 cut(s) 1250
Hin1II CATG 9 cut(s) 218, 292, 680, 758, 970, 1002, 1058, 1108, 1276
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HindIII AAGCTT 1 cut(s) 183
HinfI GANTC 7 cut(s) 85, 317, 563, 602, 617, 1190, 1214
HpaII CCGG 1 cut(s) 39
HphI GGTGA 3 cut(s) 785, 848, 968
Hpy166II GTNNAC 3 cut(s) 752, 793, 1254
Hpy188I TCNGA 2 cut(s) 696, 1317
Hpy188III TCNNGA 6 cut(s) 89, 314, 353, 528, 833, 1187
Hpy8I GTNNAC 3 cut(s) 752, 793, 1254
HpyAV CCTTC 7 cut(s) 30, 150, 385, 515, 911, 1166, 1291
HpyCH4III ACNGT 2 cut(s) 547, 976
HpyCH4IV ACGT 2 cut(s) 262, 1256
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 581, 590, 731, 740, 749, 912
HpyF3I CTNAG 3 cut(s) 744, 952, 1168
HpySE526I ACGT 2 cut(s) 262, 1256
Hsp92I GRCGYC 1 cut(s) 1250
Hsp92II CATG 9 cut(s) 218, 292, 680, 758, 970, 1002, 1058, 1108, 1276
HspAI GCGC 1 cut(s) 1052
Kzo9I GATC 4 cut(s) 487, 634, 829, 1063
LguI GCTCTTC 1 cut(s) 1278
LmnI GCTCC 3 cut(s) 286, 364, 581
Lsp1109I GCAGC 3 cut(s) 76, 587, 743
LweI GCATC 7 cut(s) 97, 247, 431, 805, 1039, 1121, 1145
MabI ACCWGGT 1 cut(s) 943
MaeI CTAG 3 cut(s) 189, 1109, 1116
MaeII ACGT 2 cut(s) 262, 1256
MaeIII GTNAC 1 cut(s) 869
MalI GATC 4 cut(s) 489, 636, 831, 1065
MboI GATC 4 cut(s) 487, 634, 829, 1063
MboII GAAGA 5 cut(s) 15, 162, 835, 926, 1295
MflI RGATCY 3 cut(s) 634, 829, 1063
MhlI GDGCHC 3 cut(s) 369, 754, 1006
MlsI TGGCCA 1 cut(s) 213
MluNI TGGCCA 1 cut(s) 213
MlyI GAGTC 4 cut(s) 94, 572, 626, 1184
Mox20I TGGCCA 1 cut(s) 213
Mph1103I ATGCAT 1 cut(s) 1060
MroXI GAANNNNTTC 1 cut(s) 96
MscI TGGCCA 1 cut(s) 213
MseI TTAA 7 cut(s) 240, 596, 656, 1014, 1233, 1302, 1323
MslI CAYNNNNRTG 3 cut(s) 105, 801, 861
Msp20I TGGCCA 1 cut(s) 213
MspA1I CMGCKG 1 cut(s) 578
MspI CCGG 1 cut(s) 39
MspR9I CCNGG 6 cut(s) 40, 302, 560, 669, 876, 945
MvaI CCWGG 5 cut(s) 302, 560, 669, 876, 945
MvnI CGCG 1 cut(s) 906
MwoI GCNNNNNNNGC 7 cut(s) 116, 581, 590, 731, 740, 749, 912
NciI CCSGG 1 cut(s) 40
NcoI CCATGG 2 cut(s) 214, 288
NdeI CATATG 2 cut(s) 460, 538
NdeII GATC 4 cut(s) 487, 634, 829, 1063
NheI GCTAGC 1 cut(s) 1108
NlaIII CATG 9 cut(s) 218, 292, 680, 758, 970, 1002, 1058, 1108, 1276
NlaIV GGNNCC 4 cut(s) 636, 693, 831, 1065
NsbI TGCGCA 1 cut(s) 1053
NsiI ATGCAT 1 cut(s) 1060
NspI RCATGY 2 cut(s) 1058, 1108
PaeI GCATGC 1 cut(s) 1058
PceI AGGCCT 1 cut(s) 471
PciSI GCTCTTC 1 cut(s) 1278
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 3 cut(s) 317, 602, 1214
PflMI CCANNNNNTGG 1 cut(s) 644
PfoI TCCNGGA 2 cut(s) 558, 667
PkrI GCNGC 3 cut(s) 66, 577, 733
PleI GAGTC 4 cut(s) 93, 571, 625, 1184
PpsI GAGTC 4 cut(s) 93, 571, 625, 1184
Ppu21I YACGTR 1 cut(s) 263
PshBI ATTAAT 1 cut(s) 240
PsiI TTATAA 1 cut(s) 776
Psp124BI GAGCTC 1 cut(s) 369
Psp6I CCWGG 5 cut(s) 300, 558, 667, 874, 943
PspFI CCCAGC 1 cut(s) 1040
PspGI CCWGG 5 cut(s) 300, 558, 667, 874, 943
PspN4I GGNNCC 4 cut(s) 636, 693, 831, 1065
PspPI GGNCC 3 cut(s) 4, 530, 692
PsuI RGATCY 3 cut(s) 634, 829, 1063
PvuII CAGCTG 1 cut(s) 578
RsaI GTAC 2 cut(s) 208, 880
RsaNI GTAC 2 cut(s) 207, 879
RseI CAYNNNNRTG 3 cut(s) 105, 801, 861
SacI GAGCTC 1 cut(s) 369
SapI GCTCTTC 1 cut(s) 1278
SaqAI TTAA 7 cut(s) 240, 596, 656, 1014, 1233, 1302, 1323
SatI GCNGC 3 cut(s) 65, 576, 732
Sau3AI GATC 4 cut(s) 487, 634, 829, 1063
Sau96I GGNCC 3 cut(s) 4, 530, 692
SchI GAGTC 4 cut(s) 94, 572, 626, 1184
ScrFI CCNGG 6 cut(s) 40, 302, 560, 669, 876, 945
SduI GDGCHC 3 cut(s) 369, 754, 1006
SexAI ACCWGGT 1 cut(s) 943
SfaNI GCATC 7 cut(s) 97, 247, 431, 805, 1039, 1121, 1145
SfcI CTRYAG 2 cut(s) 276, 339
SinI GGWCC 3 cut(s) 4, 530, 692
SmiMI CAYNNNNRTG 3 cut(s) 105, 801, 861
SphI GCATGC 1 cut(s) 1058
SseBI AGGCCT 1 cut(s) 471
SsiI CCGC 1 cut(s) 906
SspI AATATT 2 cut(s) 114, 721
SspMI CTAG 3 cut(s) 189, 1109, 1116
SstI GAGCTC 1 cut(s) 369
StuI AGGCCT 1 cut(s) 471
StyD4I CCNGG 6 cut(s) 38, 300, 558, 667, 874, 943
StyI CCWWGG 3 cut(s) 214, 288, 1134
TaaI ACNGT 2 cut(s) 547, 976
TaiI ACGT 2 cut(s) 265, 1259
TaqI TCGA 3 cut(s) 389, 1153, 1188
TfiI GAWTC 3 cut(s) 317, 602, 1214
Tru1I TTAA 7 cut(s) 240, 596, 656, 1014, 1233, 1302, 1323
Tru9I TTAA 7 cut(s) 240, 596, 656, 1014, 1233, 1302, 1323
TscAI CASTG 2 cut(s) 432, 612
TseI GCWGC 3 cut(s) 64, 575, 731
TspDTI ATGAA 6 cut(s) 437, 999, 1188, 1206, 1296, 1310
TspGWI ACGGA 2 cut(s) 371, 1195
TspRI CASTG 2 cut(s) 432, 612
Van91I CCANNNNNTGG 1 cut(s) 644
VneI GTGCAC 1 cut(s) 750
VpaK11BI GGWCC 3 cut(s) 4, 530, 692
VspI ATTAAT 1 cut(s) 240
XagI CCTNNNNNAGG 2 cut(s) 476, 942
XapI RAATTY 4 cut(s) 129, 142, 410, 887
XceI RCATGY 2 cut(s) 1058, 1108
XmiI GTMKAC 1 cut(s) 1253
XmnI GAANNNNTTC 1 cut(s) 96
XspI CTAG 3 cut(s) 189, 1109, 1116
Zsp2I ATGCAT 1 cut(s) 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.