Rorug01G0183900

zinc-binding in reverse transcriptase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000519
Physical Location & Seq
Forward (+)
25505181 .. 25508925
3745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0183900.1

Sequence Viewer

Length: 1884 bp
ATGTCTGAACAAGCCGTTGTGGATATTTGGCATTCAGAGGCTGTCAAGGGGAAAGCTCACCGTGAAGGACACGGATCAAGAAAACTATGGCCTGAACTAAAGGATGTTCTTCGGTCTTTCCAGCTAAGTTGGTGGAAAACTATATTTACAATCTCCTGCTTGCTTTCTGTCTCCGTGGATCCGTTGTTCTTATACATTCCTGTCACCAATGAAGACATGAAATGTCTCAGATTGGACCATAATCTCAAGACAGTCACTCTTTTGTTACGATCGGCCGTCGATCTCCCATGTATAGTGAACATCATTTCCCAAATTCTTGCTGTGAGGCCACGGCAGCGCCGGAGGGTTAAATTAGTGGAGATGGCTAAGCGGATTTTATGGCCATACTTCCTAGTTGATATTTTAGCTGTTCTTCCCATTCCACATGTAGTAATCCTCATTTTACTTACAAGAACGAGAAAGATTTCGAACCCGAATGCGAGGAAGTTGCTAAACTCTCTTATTCTATTCCAATATTTTCCACGAATTTTTCGCATGTACCAATCATGTAAGGTCAATAAGGAGGAGCCTGATGAGGAGGAGGCTGATAAGACTCGTTATGGCGGCCGTCGACATCGAATATGGTTCAAGGTGTACAAGTTTATCCTTGCGAGTCATGTGCTCGGAGCCTTTTGGTACTTCTTTTCTATTCAACGAGCTATGGATTGTTGGCAATATGCATGTCGAAAAGAAAAGAAATGTGGAGATAATACTTTTGACTGTGGTGGCAATCACTCATTTAAGAATGTCACATTTATAAATGATTTTTGCCCCATAAGTACACCAAATCCAACACTCTTCAATTTTGGTATATTTATGGAGGCACTTCAATCTAATATAGTGGGATCAACGGATTTTCCACAAAAGTTCTTGCATTGTTTTTGGTGGAGTCTGCAAAGTCTAAGCTCATTTGGTCAAAATCTCGAGACCAGTACTTATGCTTGGGAAAATCTCTTTGCGGTCGGTATCTCTGTAATTGGAATGATACTATTCTTAATATATCTCAATGCAGTTTTGCAGTTCGTAACTACAACATCGGAAAGACACAAGAGGGAAATGATGAGTAAGGAGGTAGATTTGTGGCTATTTAGAAAAGGCCTGCCTAGCAATTTGAAGCAAGTGATCATGCATTTCATGATACAAAAACTTAAACAGAAGATAGATGTTGGGGTGGATGATATACTCTCTATTCTTCCTTCGACACATCGTAAATACATCGAGCGTTTTCTCCGTTTGGCTATCCTTAAAAAAGTGCCAATGCTTCAAACTATGGATGTAAAAATGTTGAAAGAAATATGCGAGCACCTCCAGCCGGTGCACTATCCTGAGGACATTTGCATTATTGGAGAGGGAGAGCGACTATATAAGATGATTTTCATCACAAATGGCACTGTACAGACATACAAGACTAATGGTGAAGGTGGAAGAATTGGTTCCAAGTTTCTTGAGAAAGGGGACTTTTATGGATCAAAAGAGCTTCTCAATTGGGCATCAAAGTTTAGCTCTTTCGCCGACTTACCAATCTCGACCAGAATGGTTAAGCCCATCATGAAAGTCGAAGCCTTTGTACTGAGTGCGGAGGACTTGAAGAATGTAGTCCGTAAGTTCTGGTGGCATTTCACCAAGGACAAGGATCTAACTGAGTTCAGTGAGCCTGTGTTAGAGGAGCTAGCACTATCTACCATAAAACAAATCCGTCGCAAAGCGAAAAAGAAGCAGGCAATTAGGTCCCTCAATAATCAGCTGGCCATGGGTAGGCCAAGTATGAAGTTGCAACGGGTCGTCAGCAGGGCCATGTGGGATCAGCTACCGTCTCCGGTTCAATCTCCGGCTCATTCTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

627

Amino Acids

72.98

Weight (kDa)

9.61

Isoelectric Point (pI)

48.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000519)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g27751 FvH4_2g10620 FvH4_4g13701 FvH4_4g17370 FvH4_6g49051
pyrus_communis pycom11g18020
rosa_chinensis RchiOBHm_Chr1g0331041 RchiOBHm_Chr2g0088901 RchiOBHm_Chr2g0100641 RchiOBHm_Chr6g0281891
rosa_laevigata RLG00000011791 RLG00000028155 RLG00000035981
rosa_multiflora Rmu_co8368635.1_g000001 Rmu_co8370105.1_g000001 Rmu_sc0000850.1_g000010 Rmu_sc0001374.1_g000060 Rmu_sc0001654.1_g000024 Rmu_sc0001840.1_g000023 Rmu_sc0001900.1_g000032 Rmu_sc0002687.1_g000008 Rmu_sc0003133.1_g000026 Rmu_sc0003252.1_g000002 Rmu_sc0004206.1_g000011 Rmu_sc0004666.1_g000002 Rmu_sc0006255.1_g000004 Rmu_sc0006812.1_g000001 Rmu_sc0007025.1_g000012 Rmu_sc0007767.1_g000020 Rmu_sc0007833.1_g000004 Rmu_sc0007848.1_g000020 Rmu_sc0007883.1_g000010 Rmu_sc0008270.1_g000003 Rmu_sc0012097.1_g000011 Rmu_sc0014445.1_g000002 Rmu_sc0023292.1_g000001
rosa_roxburghii Rroxscaffold_1G00021670 Rroxscaffold_1G00027660 Rroxscaffold_1G00056090 Rroxscaffold_2G00111250 Rroxscaffold_2G00111320 Rroxscaffold_3G00248390 Rroxscaffold_6G00394880 Rroxscaffold_7G00192450
rosa_rugosa Rorug01G0071500 Rorug01G0183900 Rorug01G0242400 Rorug02G0045300 Rorug02G0051000 Rorug02G0061700 Rorug02G0091500 Rorug02G0091600 Rorug02G0091700 Rorug02G0091800 Rorug02G0284700 Rorug02G0335100 Rorug02G0336900 Rorug02G0405500.1 Rorug02G0498300 Rorug03G0173700 Rorug03G0228900 Rorug03G0256300 Rorug04G0014300 Rorug04G0130400 Rorug04G0138100 Rorug04G0138100 Rorug04G0150400.1 Rorug05G0000600 Rorug05G0160400 Rorug05G0165600 Rorug05G0378500 Rorug06G0072000 Rorug06G0107900 Rorug06G0268700 Rorug07G0015500 Rorug07G0266300 Rorug07G0274500
rosa_samantha Rh2AG439400 Rh2AG561100 Rh2DG459400 Rh3AG236100 Rh4BG212500 Rh6AG046300 Rh6BG073000 Rh7DG249100
rosa_wichuraiana Rw2G010910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 797
AccI GTMKAC 1 cut(s) 610
AciI CCGC 4 cut(s) 370, 603, 998, 1616
AclWI GGATC 7 cut(s) 82, 173, 186, 892, 1513, 1680, 1848
AcoI YGGCCR 4 cut(s) 273, 380, 604, 1785
AcsI RAATTY 2 cut(s) 312, 525
AfaI GTAC 7 cut(s) 539, 635, 677, 820, 973, 1434, 1608
AfiI CCNNNNNNNGG 2 cut(s) 1351, 1794
AflIII ACRYGT 1 cut(s) 424
AgsI TTSAA 9 cut(s) 628, 692, 841, 869, 1153, 1304, 1327, 1627, 1862
AloI GAACNNNNNNTCC 4 cut(s) 170, 202, 290, 322
Alw21I GWGCWC 3 cut(s) 663, 1344, 1359
Alw26I GTCTC 4 cut(s) 175, 230, 959, 1857
Alw44I GTGCAC 1 cut(s) 1355
AlwI GGATC 7 cut(s) 82, 173, 186, 892, 1513, 1680, 1848
AlwNI CAGNNNCTG 1 cut(s) 41
Ama87I CYCGRG 1 cut(s) 962
AoxI GGCC 9 cut(s) 89, 273, 326, 380, 604, 1135, 1785, 1796, 1830
ApaLI GTGCAC 1 cut(s) 1355
ApeKI GCWGC 1 cut(s) 334
ApoI RAATTY 2 cut(s) 312, 525
Asp700I GAANNNNTTC 2 cut(s) 463, 1471
AspLEI GCGC 1 cut(s) 339
AspS9I GGNCC 3 cut(s) 235, 1767, 1830
AsuHPI GGTGA 4 cut(s) 50, 196, 1466, 1651
AsuII TTCGAA 1 cut(s) 467
AsuNHI GCTAGC 1 cut(s) 1708
AvaI CYCGRG 1 cut(s) 962
AvaII GGWCC 2 cut(s) 235, 1767
AxyI CCTNAGG 1 cut(s) 1365
BaeGI GKGCMC 1 cut(s) 1359
BalI TGGCCA 2 cut(s) 382, 1787
BamHI GGATCC 1 cut(s) 178
BarI GAAGNNNNNNTAC 2 cut(s) 1590, 1622
BbsI GAAGAC 1 cut(s) 219
Bbv12I GWGCWC 3 cut(s) 663, 1344, 1359
BbvI GCAGC 1 cut(s) 346
BccI CCATC 2 cut(s) 355, 1592
BceAI ACGGC 3 cut(s) 260, 347, 591
BcgI CGANNNNNNTGC 4 cut(s) 469, 503, 640, 674
BclI TGATCA 1 cut(s) 1161
BcoDI GTCTC 4 cut(s) 175, 230, 959, 1857
BfaI CTAG 3 cut(s) 392, 1143, 1709
BfoI RGCGCY 1 cut(s) 340
BisI GCNGC 2 cut(s) 335, 604
BlpI GCTNAGC 1 cut(s) 366
BlsI GCNGC 2 cut(s) 336, 605
BmcAI AGTACT 1 cut(s) 973
Bme18I GGWCC 2 cut(s) 235, 1767
BmeT110I CYCGRG 1 cut(s) 962
BmgT120I GGNCC 3 cut(s) 235, 1767, 1830
BmiI GGNNCC 5 cut(s) 180, 567, 667, 1474, 1769
BmsI GCATC 1 cut(s) 1538
BmtI GCTAGC 1 cut(s) 1712
BpiI GAAGAC 1 cut(s) 219
BpmI CTGGAG 1 cut(s) 1331
Bpu1102I GCTNAGC 1 cut(s) 366
Bpu14I TTCGAA 1 cut(s) 467
BpuEI CTTGAG 2 cut(s) 230, 1505
BsaBI GATNNNNATC 1 cut(s) 1415
BsaI GGTCTC 1 cut(s) 959
BsaJI CCNNGG 4 cut(s) 174, 329, 1662, 1788
BsaWI WCCGGW 1 cut(s) 1855
Bsc4I CCNNNNNNNGG 2 cut(s) 1351, 1794
Bse118I RCCGGY 1 cut(s) 1351
Bse1I ACTGG 1 cut(s) 969
Bse21I CCTNAGG 1 cut(s) 1365
Bse8I GATNNNNATC 1 cut(s) 1415
BseDI CCNNGG 4 cut(s) 174, 329, 1662, 1788
BseGI GGATG 3 cut(s) 109, 1219, 1318
BseJI GATNNNNATC 1 cut(s) 1415
BseLI CCNNNNNNNGG 2 cut(s) 1351, 1794
BseMII CTCAG 4 cut(s) 241, 1356, 1601, 1671
BseNI ACTGG 1 cut(s) 969
BseRI GAGGAG 4 cut(s) 578, 590, 593, 1718
BseSI GKGCMC 1 cut(s) 1359
BseX3I CGGCCG 2 cut(s) 273, 604
BseXI GCAGC 1 cut(s) 346
Bsh1285I CGRYCG 4 cut(s) 272, 276, 607, 1002
BshFI GGCC 9 cut(s) 91, 275, 328, 382, 606, 1137, 1787, 1798, 1832
BsiEI CGRYCG 4 cut(s) 272, 276, 607, 1002
BsiHKAI GWGCWC 3 cut(s) 663, 1344, 1359
BsiHKCI CYCGRG 1 cut(s) 962
BsiSI CCGG 4 cut(s) 340, 1352, 1856, 1868
BslFI GGGAC 2 cut(s) 1508, 1753
BslI CCNNNNNNNGG 2 cut(s) 1351, 1794
BsmAI GTCTC 4 cut(s) 175, 230, 959, 1857
BsmBI CGTCTC 1 cut(s) 1857
BsmFI GGGAC 2 cut(s) 1508, 1753
BsmI GAATGC 2 cut(s) 31, 481
BsnI GGCC 9 cut(s) 91, 275, 328, 382, 606, 1137, 1787, 1798, 1832
Bso31I GGTCTC 1 cut(s) 959
BsoBI CYCGRG 1 cut(s) 962
Bsp119I TTCGAA 1 cut(s) 467
Bsp1286I GDGCHC 3 cut(s) 663, 1344, 1359
Bsp1407I TGTACA 2 cut(s) 633, 1432
Bsp143I GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
Bsp1720I GCTNAGC 1 cut(s) 366
Bsp19I CCATGG 1 cut(s) 1788
BspACI CCGC 4 cut(s) 370, 603, 998, 1616
BspANI GGCC 9 cut(s) 91, 275, 328, 382, 606, 1137, 1787, 1798, 1832
BspCNI CTCAG 4 cut(s) 240, 1357, 1602, 1672
BspHI TCATGA 2 cut(s) 1173, 1587
BspLI GGNNCC 5 cut(s) 180, 567, 667, 1474, 1769
BspOI GCTAGC 1 cut(s) 1712
BspPI GGATC 7 cut(s) 82, 173, 186, 892, 1513, 1680, 1848
BspT104I TTCGAA 1 cut(s) 467
BspTNI GGTCTC 1 cut(s) 959
BsrFI RCCGGY 1 cut(s) 1351
BsrGI TGTACA 2 cut(s) 633, 1432
BsrI ACTGG 1 cut(s) 969
BssAI RCCGGY 1 cut(s) 1351
BssECI CCNNGG 4 cut(s) 174, 329, 1662, 1788
BssMI GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
BssT1I CCWWGG 2 cut(s) 1662, 1788
Bst4CI ACNGT 5 cut(s) 62, 253, 761, 1432, 1851
Bst6I CTCTTC 1 cut(s) 842
BstAUI TGTACA 2 cut(s) 633, 1432
BstBI TTCGAA 1 cut(s) 467
BstC8I GCNNGC 6 cut(s) 161, 1139, 1340, 1710, 1758, 1785
BstDEI CTNAG 7 cut(s) 125, 227, 366, 941, 1365, 1610, 1680
BstDSI CCRYGG 3 cut(s) 174, 329, 1788
BstF5I GGATG 3 cut(s) 109, 1219, 1318
BstH2I RGCGCY 1 cut(s) 340
BstHHI GCGC 1 cut(s) 339
BstKTI GATC 9 cut(s) 77, 181, 272, 283, 887, 1164, 1508, 1675, 1843
BstMAI GTCTC 4 cut(s) 175, 230, 959, 1857
BstMBI GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
BstMCI CGRYCG 4 cut(s) 272, 276, 607, 1002
BstMWI GCNNNNNNNGC 3 cut(s) 334, 1143, 1348
BstNSI RCATGY 3 cut(s) 428, 538, 723
BstSLI GKGCMC 1 cut(s) 1359
BstV1I GCAGC 1 cut(s) 346
BstV2I GAAGAC 1 cut(s) 219
BstX2I RGATCY 2 cut(s) 178, 1672
BstYI RGATCY 2 cut(s) 178, 1672
BstZI CGGCCG 2 cut(s) 273, 604
Bsu36I CCTNAGG 1 cut(s) 1365
BsuRI GGCC 9 cut(s) 91, 275, 328, 382, 606, 1137, 1787, 1798, 1832
BtgI CCRYGG 3 cut(s) 174, 329, 1788
BtsCI GGATG 3 cut(s) 109, 1219, 1318
BtsIMutI CAGTG 2 cut(s) 1428, 1693
Cac8I GCNNGC 6 cut(s) 161, 1139, 1340, 1710, 1758, 1785
CaiI CAGNNNCTG 1 cut(s) 41
CciI TCATGA 2 cut(s) 1173, 1587
CfoI GCGC 1 cut(s) 339
Cfr10I RCCGGY 1 cut(s) 1351
Cfr13I GGNCC 3 cut(s) 235, 1767, 1830
Csp6I GTAC 7 cut(s) 538, 634, 676, 819, 972, 1433, 1607
CviQI GTAC 7 cut(s) 538, 634, 676, 819, 972, 1433, 1607
DdeI CTNAG 7 cut(s) 125, 227, 366, 941, 1365, 1610, 1680
DpnI GATC 9 cut(s) 76, 180, 271, 282, 886, 1163, 1507, 1674, 1842
DpnII GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
EaeI YGGCCR 4 cut(s) 273, 380, 604, 1785
EagI CGGCCG 2 cut(s) 273, 604
Eam1104I CTCTTC 1 cut(s) 842
EarI CTCTTC 1 cut(s) 842
EclXI CGGCCG 2 cut(s) 273, 604
Eco130I CCWWGG 2 cut(s) 1662, 1788
Eco147I AGGCCT 1 cut(s) 1137
Eco31I GGTCTC 1 cut(s) 959
Eco47I GGWCC 2 cut(s) 235, 1767
Eco52I CGGCCG 2 cut(s) 273, 604
Eco81I CCTNAGG 1 cut(s) 1365
Eco88I CYCGRG 1 cut(s) 962
EcoO109I RGGNCCY 1 cut(s) 1767
EcoT14I CCWWGG 2 cut(s) 1662, 1788
EcoT22I ATGCAT 2 cut(s) 721, 1170
ErhI CCWWGG 2 cut(s) 1662, 1788
Esp3I CGTCTC 1 cut(s) 1857
FaqI GGGAC 2 cut(s) 1508, 1753
FbaI TGATCA 1 cut(s) 1161
FblI GTMKAC 1 cut(s) 610
Fnu4HI GCNGC 2 cut(s) 335, 604
FokI GGATG 3 cut(s) 116, 1226, 1325
Fsp4HI GCNGC 2 cut(s) 335, 604
FspBI CTAG 3 cut(s) 392, 1143, 1709
GlaI GCGC 1 cut(s) 338
GluI GCNGC 2 cut(s) 335, 604
GsuI CTGGAG 1 cut(s) 1331
HaeII RGCGCY 1 cut(s) 340
HaeIII GGCC 9 cut(s) 91, 275, 328, 382, 606, 1137, 1787, 1798, 1832
HapII CCGG 4 cut(s) 340, 1352, 1856, 1868
HhaI GCGC 1 cut(s) 339
Hin6I GCGC 1 cut(s) 337
HinP1I GCGC 1 cut(s) 337
HincII GTYRAC 1 cut(s) 611
HindII GTYRAC 1 cut(s) 611
HinfI GANTC 3 cut(s) 592, 652, 928
HpaII CCGG 4 cut(s) 340, 1352, 1856, 1868
HphI GGTGA 4 cut(s) 50, 196, 1466, 1651
Hpy166II GTNNAC 5 cut(s) 298, 611, 634, 821, 1357
Hpy188I TCNGA 5 cut(s) 7, 37, 230, 665, 1078
Hpy188III TCNNGA 9 cut(s) 78, 247, 962, 964, 1174, 1364, 1484, 1564, 1588
Hpy8I GTNNAC 5 cut(s) 298, 611, 634, 821, 1357
Hpy99I CGWCG 3 cut(s) 281, 612, 1740
HpyAV CCTTC 3 cut(s) 59, 1245, 1451
HpyCH4III ACNGT 5 cut(s) 62, 253, 761, 1432, 1851
HpyCH4V TGCA 9 cut(s) 719, 913, 934, 1049, 1057, 1168, 1357, 1377, 1813
HpyF10VI GCNNNNNNNGC 3 cut(s) 334, 1143, 1348
HpyF3I CTNAG 7 cut(s) 125, 227, 366, 941, 1365, 1610, 1680
HspAI GCGC 1 cut(s) 337
Ksp22I TGATCA 1 cut(s) 1161
Kzo9I GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
LmnI GCTCC 3 cut(s) 565, 665, 1705
Lsp1109I GCAGC 1 cut(s) 346
LweI GCATC 1 cut(s) 1538
MaeI CTAG 3 cut(s) 392, 1143, 1709
MaeIII GTNAC 5 cut(s) 202, 253, 264, 787, 1063
MalI GATC 9 cut(s) 76, 180, 271, 282, 886, 1163, 1507, 1674, 1842
MboI GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
MboII GAAGA 8 cut(s) 101, 224, 404, 829, 1207, 1223, 1476, 1639
MfeI CAATTG 1 cut(s) 1522
MflI RGATCY 2 cut(s) 178, 1672
MhlI GDGCHC 3 cut(s) 663, 1344, 1359
MlsI TGGCCA 2 cut(s) 382, 1787
MluCI AATT 9 cut(s) 312, 350, 525, 841, 1014, 1147, 1467, 1522, 1761
MluNI TGGCCA 2 cut(s) 382, 1787
MlyI GAGTC 3 cut(s) 586, 661, 937
MmeI TCCRAC 1 cut(s) 854
Mox20I TGGCCA 2 cut(s) 382, 1787
Mph1103I ATGCAT 2 cut(s) 721, 1170
MroXI GAANNNNTTC 2 cut(s) 463, 1471
MscI TGGCCA 2 cut(s) 382, 1787
MseI TTAA 6 cut(s) 348, 780, 1034, 1188, 1284, 1578
Msp20I TGGCCA 2 cut(s) 382, 1787
MspA1I CMGCKG 1 cut(s) 1783
MspI CCGG 4 cut(s) 340, 1352, 1856, 1868
MunI CAATTG 1 cut(s) 1522
Mva1269I GAATGC 2 cut(s) 31, 481
MwoI GCNNNNNNNGC 3 cut(s) 334, 1143, 1348
NcoI CCATGG 1 cut(s) 1788
NdeII GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
NheI GCTAGC 1 cut(s) 1708
NlaIV GGNNCC 5 cut(s) 180, 567, 667, 1474, 1769
NmuCI GTSAC 3 cut(s) 202, 253, 787
NsiI ATGCAT 2 cut(s) 721, 1170
NspI RCATGY 3 cut(s) 428, 538, 723
NspV TTCGAA 1 cut(s) 467
PaeR7I CTCGAG 1 cut(s) 962
PagI TCATGA 2 cut(s) 1173, 1587
PceI AGGCCT 1 cut(s) 1137
PciI ACATGT 1 cut(s) 424
PctI GAATGC 2 cut(s) 31, 481
PdmI GAANNNNTTC 2 cut(s) 463, 1471
PkrI GCNGC 2 cut(s) 336, 605
Ple19I CGATCG 1 cut(s) 272
PleI GAGTC 3 cut(s) 586, 660, 936
PpsI GAGTC 3 cut(s) 586, 660, 936
PpuMI RGGWCCY 1 cut(s) 1767
PscI ACATGT 1 cut(s) 424
PsiI TTATAA 1 cut(s) 797
Psp5II RGGWCCY 1 cut(s) 1767
PspN4I GGNNCC 5 cut(s) 180, 567, 667, 1474, 1769
PspPI GGNCC 3 cut(s) 235, 1767, 1830
PspPPI RGGWCCY 1 cut(s) 1767
PstNI CAGNNNCTG 1 cut(s) 41
PsuI RGATCY 2 cut(s) 178, 1672
PvuI CGATCG 1 cut(s) 272
PvuII CAGCTG 1 cut(s) 1783
RsaI GTAC 7 cut(s) 539, 635, 677, 820, 973, 1434, 1608
RsaNI GTAC 7 cut(s) 538, 634, 676, 819, 972, 1433, 1607
SalI GTCGAC 1 cut(s) 609
SaqAI TTAA 6 cut(s) 348, 780, 1034, 1188, 1284, 1578
SatI GCNGC 2 cut(s) 335, 604
Sau3AI GATC 9 cut(s) 74, 178, 269, 280, 884, 1161, 1505, 1672, 1840
Sau96I GGNCC 3 cut(s) 235, 1767, 1830
ScaI AGTACT 1 cut(s) 973
SchI GAGTC 3 cut(s) 586, 661, 937
SduI GDGCHC 3 cut(s) 663, 1344, 1359
SfaNI GCATC 1 cut(s) 1538
Sfr274I CTCGAG 1 cut(s) 962
SfuI TTCGAA 1 cut(s) 467
SinI GGWCC 2 cut(s) 235, 1767
SlaI CTCGAG 1 cut(s) 962
SmlI CTYRAG 3 cut(s) 245, 962, 1484
SmoI CTYRAG 3 cut(s) 245, 962, 1484
Sse9I AATT 9 cut(s) 312, 350, 525, 841, 1014, 1147, 1467, 1522, 1761
SseBI AGGCCT 1 cut(s) 1137
SsiI CCGC 4 cut(s) 370, 603, 998, 1616
SspI AATATT 1 cut(s) 515
SspMI CTAG 3 cut(s) 392, 1143, 1709
StuI AGGCCT 1 cut(s) 1137
StyI CCWWGG 2 cut(s) 1662, 1788
TaaI ACNGT 5 cut(s) 62, 253, 761, 1432, 1851
TaqII GACCGA 1 cut(s) 102
TasI AATT 9 cut(s) 312, 350, 525, 841, 1014, 1147, 1467, 1522, 1761
TatI WGTACW 5 cut(s) 633, 818, 971, 1432, 1606
TauI GCSGC 1 cut(s) 606
Tru1I TTAA 6 cut(s) 348, 780, 1034, 1188, 1284, 1578
Tru9I TTAA 6 cut(s) 348, 780, 1034, 1188, 1284, 1578
TscAI CASTG 2 cut(s) 1435, 1693
TseFI GTSAC 3 cut(s) 202, 253, 787
TseI GCWGC 1 cut(s) 334
Tsp45I GTSAC 3 cut(s) 202, 253, 787
TspDTI ATGAA 6 cut(s) 225, 233, 1162, 1405, 1604, 1820
TspGWI ACGGA 7 cut(s) 87, 163, 171, 905, 1259, 1628, 1724
TspRI CASTG 2 cut(s) 1435, 1693
VneI GTGCAC 1 cut(s) 1355
VpaK11BI GGWCC 2 cut(s) 235, 1767
XapI RAATTY 2 cut(s) 312, 525
XceI RCATGY 3 cut(s) 428, 538, 723
XhoI CTCGAG 1 cut(s) 962
XmiI GTMKAC 1 cut(s) 610
XmnI GAANNNNTTC 2 cut(s) 463, 1471
XspI CTAG 3 cut(s) 392, 1143, 1709
ZrmI AGTACT 1 cut(s) 973
Zsp2I ATGCAT 2 cut(s) 721, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.