Rorug07G0266300

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000519
Physical Location & Seq
Forward (+)
25129992 .. 25131736
1745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0266300.1

Sequence Viewer

Length: 1458 bp
ATGACTGCTGAGATTCTAGTAGTGCCCAAAGATGGCAAGGGCCACCTCTTCCCATGCCTCGAGCTCTGCAACCACCTCATTGCCCGAAATTACCATATCACCCTCATCCTCGAATCTGATCTCACCTCCTCCATCCCCTCCTCTCTCCTCCAATCTCCCCTCTTCAAACTCACCAACATCTCCTCCTCCTCACCGCCGTCGCCTTTCCCCAGCCACCACATGCTTCAGGGCCTCGAGGCGTTCTTGGCCCAGCCGCACCGGGATCCGACCCGACCCGTTTTCGCCGTCATAGACCACATTATGAGCAAGACGCAGGAGGTGTTTTGGAAGTTCGGGATTCCCACGGTGGTCTTCATCACCTCCGGGGCCGCCTGGGCCGCCATCCAGCACGCCGTGTGGGTGGTCCGACCCGACGACATGAAACCCGGCGAGGCCAGAGCCCTTCCCGGGTTACCCGAAAACATGGTCATTACGTACTCGGATCTCAAACAACGGCGTCCTTGGATTCCGTCACCGCCACCGCATAAAACACCCTCCCACTCCGGCGGTCCTGGCGGAATGAAGCCGCCGCGAGGACCGCCTCTCCCGGGCGAACCGGCGCCGTGGGTGGAGGAGGTGAAGAGCTCCTCCGCGATACTGATCAACACGTGTGACGATCTCGAACGTCCATTTCTGGACTACATTTCCGACTTGACCGGAAAACCCGTTTGGGGAGTGGGTCCCTTACTGCCGGAGCAGTACTGGAAGTCGTTCGAGTCCCTGCTCCACGACCCCGAGATCCGACCCAAGCGCGAATCCAACTACACAGAGGACGAGATCATCCAATGGCTCGATTCCAAGCCACGTGGATCCGTCGTCTACGTGTCATTCGGCAGCGAGGTGAATCCCACAAACGAGGAGTACCCGGAGCTGACCAAAGCACTGGAGGAGTCGACCCGGCCGTTCATATGGGTCATCCAACGCAAGTCCGGAAAACCGGGTCCCGGTTCGGGGCGTCCGGGTCCGGGTGGTCCACCGGAAGAGAGCTATTTTCCAAACGGGTTGGATGCTAAAGTCGGAAAGAGAGGTCTAATAATTCACGGCTGGGCCCCACAGCTATTGATCCTCAGCCATCCATCGGCCGGCGGGTTTATATCTCACTGCGGGTGGAATTCTACGCTGGAGGCAGTTGTACGTGGCGTGCCGCTATTGGCGTGGCCAATTAGGGGCGATCAGTACTACAATGCGAAGCTGGTGGTGAGCTATCTCAAAGTAGGGAGCATGGTGTCCGAGGGCTATCCGGCTGATAAGGTTACCAAGGACGACATAATGGTTGGCTTGGACAGGGTTTTGGAAGATGAAGAGATAAGGACACGATCGGCGGCGATCCGGGACAAGTTCGAGAATGGCTATCCGGCAAGCTCGGTGGCCTCACTGGATGCTTTTTGTGATTTTGTCAACAAAAAATTTGTCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3

Protein Analysis

485

Amino Acids

53.57

Weight (kDa)

6.18

Isoelectric Point (pI)

50.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 273 - 448 1.1e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000519)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g27751 FvH4_2g10620 FvH4_4g13701 FvH4_4g17370 FvH4_6g49051
pyrus_communis pycom11g18020
rosa_chinensis RchiOBHm_Chr1g0331041 RchiOBHm_Chr2g0088901 RchiOBHm_Chr2g0100641 RchiOBHm_Chr6g0281891
rosa_laevigata RLG00000011791 RLG00000028155 RLG00000035981
rosa_multiflora Rmu_co8368635.1_g000001 Rmu_co8370105.1_g000001 Rmu_sc0000850.1_g000010 Rmu_sc0001374.1_g000060 Rmu_sc0001654.1_g000024 Rmu_sc0001840.1_g000023 Rmu_sc0001900.1_g000032 Rmu_sc0002687.1_g000008 Rmu_sc0003133.1_g000026 Rmu_sc0003252.1_g000002 Rmu_sc0004206.1_g000011 Rmu_sc0004666.1_g000002 Rmu_sc0006255.1_g000004 Rmu_sc0006812.1_g000001 Rmu_sc0007025.1_g000012 Rmu_sc0007767.1_g000020 Rmu_sc0007833.1_g000004 Rmu_sc0007848.1_g000020 Rmu_sc0007883.1_g000010 Rmu_sc0008270.1_g000003 Rmu_sc0012097.1_g000011 Rmu_sc0014445.1_g000002 Rmu_sc0023292.1_g000001
rosa_roxburghii Rroxscaffold_1G00021670 Rroxscaffold_1G00027660 Rroxscaffold_1G00056090 Rroxscaffold_2G00111250 Rroxscaffold_2G00111320 Rroxscaffold_3G00248390 Rroxscaffold_6G00394880 Rroxscaffold_7G00192450
rosa_rugosa Rorug01G0071500 Rorug01G0183900 Rorug01G0242400 Rorug02G0045300 Rorug02G0051000 Rorug02G0061700 Rorug02G0091500 Rorug02G0091600 Rorug02G0091700 Rorug02G0091800 Rorug02G0284700 Rorug02G0335100 Rorug02G0336900 Rorug02G0405500.1 Rorug02G0498300 Rorug03G0173700 Rorug03G0228900 Rorug03G0256300 Rorug04G0014300 Rorug04G0130400 Rorug04G0138100 Rorug04G0138100 Rorug04G0150400.1 Rorug05G0000600 Rorug05G0160400 Rorug05G0165600 Rorug05G0378500 Rorug06G0072000 Rorug06G0107900 Rorug06G0268700 Rorug07G0015500 Rorug07G0266300 Rorug07G0274500
rosa_samantha Rh2AG439400 Rh2AG561100 Rh2DG459400 Rh3AG236100 Rh4BG212500 Rh6AG046300 Rh6BG073000 Rh7DG249100
rosa_wichuraiana Rw2G010910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 233
AccB1I GGYRCC 1 cut(s) 598
AccI GTMKAC 2 cut(s) 858, 932
AccII CGCG 3 cut(s) 571, 632, 792
AccIII TCCGGA 1 cut(s) 968
AclWI GGATC 8 cut(s) 257, 270, 489, 772, 843, 856, 1096, 1360
AcoI YGGCCR 3 cut(s) 938, 1119, 1196
AcsI RAATTY 2 cut(s) 1150, 1445
AcuI CTGAAG 1 cut(s) 209
AcvI CACGTG 2 cut(s) 648, 845
AcyI GRCGYC 3 cut(s) 496, 599, 994
AdeI CACNNNGTG 1 cut(s) 394
AfaI GTAC 5 cut(s) 476, 740, 902, 1173, 1217
AflIII ACRYGT 3 cut(s) 645, 647, 861
AgsI TTSAA 1 cut(s) 166
AjnI CCWGG 2 cut(s) 371, 550
AjuI GAANNNNNNNTTGG 2 cut(s) 691, 723
AluBI AGCT 8 cut(s) 64, 624, 910, 1026, 1096, 1231, 1242, 1401
AluI AGCT 8 cut(s) 64, 624, 910, 1026, 1096, 1231, 1242, 1401
Alw21I GWGCWC 2 cut(s) 66, 626
AlwI GGATC 8 cut(s) 257, 270, 489, 772, 843, 856, 1096, 1360
Ama87I CYCGRG 5 cut(s) 59, 233, 446, 586, 773
Aor13HI TCCGGA 1 cut(s) 968
ApaI GGGCCC 1 cut(s) 1090
ApeKI GCWGC 1 cut(s) 873
ApoI RAATTY 2 cut(s) 1150, 1445
ArsI GACNNNNNNTTYG 3 cut(s) 450, 482, 1434
Asp700I GAANNNNTTC 1 cut(s) 749
AspLEI GCGC 2 cut(s) 601, 792
AsuHPI GGTGA 9 cut(s) 91, 115, 163, 183, 349, 504, 628, 892, 1249
AvaI CYCGRG 5 cut(s) 59, 233, 446, 586, 773
AvaII GGWCC 7 cut(s) 403, 548, 575, 719, 980, 1001, 1010
BaeGI GKGCMC 2 cut(s) 27, 1090
BalI TGGCCA 1 cut(s) 1198
BamHI GGATCC 2 cut(s) 262, 848
BanI GGYRCC 1 cut(s) 598
BanII GRGCYC 4 cut(s) 66, 442, 626, 1090
BbrPI CACGTG 2 cut(s) 648, 845
BbsI GAAGAC 1 cut(s) 343
Bbv12I GWGCWC 2 cut(s) 66, 626
BbvCI CCTCAGC 1 cut(s) 1106
BbvI GCAGC 1 cut(s) 885
BccI CCATC 5 cut(s) 26, 140, 389, 1119, 1123
BceAI ACGGC 7 cut(s) 181, 269, 377, 509, 586, 925, 1096
BciT130I CCWGG 2 cut(s) 373, 552
BclI TGATCA 1 cut(s) 639
BfaI CTAG 1 cut(s) 17
BfoI RGCGCY 1 cut(s) 602
BglI GCCNNNNNGGC 1 cut(s) 374
BisI GCNGC 8 cut(s) 254, 369, 378, 566, 569, 874, 1184, 1362
BlsI GCNGC 8 cut(s) 255, 370, 379, 567, 570, 875, 1185, 1363
BmcAI AGTACT 2 cut(s) 740, 1217
Bme18I GGWCC 7 cut(s) 403, 548, 575, 719, 980, 1001, 1010
BmeT110I CYCGRG 5 cut(s) 59, 233, 446, 586, 773
BmsI GCATC 2 cut(s) 1036, 1408
BpiI GAAGAC 1 cut(s) 343
BpmI CTGGAG 2 cut(s) 944, 1181
Bpu10I CCTNAGC 1 cut(s) 1106
BsaAI YACGTR 5 cut(s) 474, 648, 845, 862, 1175
BsaBI GATNNNNATC 1 cut(s) 638
BsaHI GRCGYC 3 cut(s) 496, 599, 994
BsaJI CCNNGG 9 cut(s) 342, 363, 372, 446, 500, 586, 602, 1269, 1296
BsaWI WCCGGW 3 cut(s) 695, 968, 1015
BsaXI ACNNNNNCTCC 4 cut(s) 167, 197, 567, 597
Bse118I RCCGGY 2 cut(s) 595, 1121
Bse1I ACTGG 3 cut(s) 746, 927, 1419
Bse3DI GCAATG 1 cut(s) 78
Bse8I GATNNNNATC 1 cut(s) 638
BseAI TCCGGA 1 cut(s) 968
BseBI CCWGG 2 cut(s) 373, 552
BseDI CCNNGG 9 cut(s) 342, 363, 372, 446, 500, 586, 602, 1269, 1296
BseGI GGATG 8 cut(s) 105, 132, 381, 819, 954, 1051, 1111, 1423
BseJI GATNNNNATC 1 cut(s) 638
BseMI GCAATG 1 cut(s) 78
BseMII CTCAG 1 cut(s) 1120
BseNI ACTGG 3 cut(s) 746, 927, 1419
BseSI GKGCMC 2 cut(s) 27, 1090
BseX3I CGGCCG 2 cut(s) 938, 1119
BseXI GCAGC 1 cut(s) 885
BseYI CCCAGC 3 cut(s) 209, 249, 1083
Bsh1236I CGCG 3 cut(s) 571, 632, 792
Bsh1285I CGRYCG 3 cut(s) 941, 1122, 1358
BshNI GGYRCC 1 cut(s) 598
BsiEI CGRYCG 3 cut(s) 941, 1122, 1358
BsiHKAI GWGCWC 2 cut(s) 66, 626
BsiHKCI CYCGRG 5 cut(s) 59, 233, 446, 586, 773
BslFI GGGAC 4 cut(s) 705, 742, 966, 1385
BsmFI GGGAC 4 cut(s) 705, 742, 966, 1385
BsoBI CYCGRG 5 cut(s) 59, 233, 446, 586, 773
Bsp120I GGGCCC 1 cut(s) 1086
Bsp1286I GDGCHC 5 cut(s) 27, 66, 442, 626, 1090
Bsp13I TCCGGA 1 cut(s) 968
BspCNI CTCAG 1 cut(s) 1119
BspEI TCCGGA 1 cut(s) 968
BspFNI CGCG 3 cut(s) 571, 632, 792
BspPI GGATC 8 cut(s) 257, 270, 489, 772, 843, 856, 1096, 1360
BspQI GCTCTTC 1 cut(s) 614
BspT107I GGYRCC 1 cut(s) 598
BsrDI GCAATG 1 cut(s) 78
BsrFI RCCGGY 2 cut(s) 595, 1121
BsrI ACTGG 3 cut(s) 746, 927, 1419
BssAI RCCGGY 2 cut(s) 595, 1121
BssECI CCNNGG 9 cut(s) 342, 363, 372, 446, 500, 586, 602, 1269, 1296
BssNI GRCGYC 3 cut(s) 496, 599, 994
BssT1I CCWWGG 2 cut(s) 500, 1296
Bst2UI CCWGG 2 cut(s) 373, 552
Bst4CI ACNGT 1 cut(s) 346
Bst6I CTCTTC 5 cut(s) 53, 167, 614, 1014, 1335
BstACI GRCGYC 3 cut(s) 496, 599, 994
BstBAI YACGTR 5 cut(s) 474, 648, 845, 862, 1175
BstC8I GCNNGC 4 cut(s) 390, 1123, 1181, 1399
BstDEI CTNAG 2 cut(s) 9, 1106
BstDSI CCRYGG 2 cut(s) 342, 602
BstEII GGTNACC 2 cut(s) 450, 1291
BstF5I GGATG 8 cut(s) 105, 132, 381, 819, 954, 1051, 1111, 1423
BstFNI CGCG 3 cut(s) 571, 632, 792
BstH2I RGCGCY 1 cut(s) 602
BstHHI GCGC 2 cut(s) 601, 792
BstMCI CGRYCG 3 cut(s) 941, 1122, 1358
BstMWI GCNNNNNNNGC 5 cut(s) 245, 374, 377, 552, 577
BstNI CCWGG 2 cut(s) 373, 552
BstNSI RCATGY 1 cut(s) 223
BstPI GGTNACC 2 cut(s) 450, 1291
BstSLI GKGCMC 2 cut(s) 27, 1090
BstSNI TACGTA 1 cut(s) 474
BstUI CGCG 3 cut(s) 571, 632, 792
BstV1I GCAGC 1 cut(s) 885
BstV2I GAAGAC 1 cut(s) 343
BstX2I RGATCY 4 cut(s) 262, 481, 777, 848
BstXI CCANNNNNNTGG 1 cut(s) 922
BstYI RGATCY 4 cut(s) 262, 481, 777, 848
BstZI CGGCCG 2 cut(s) 938, 1119
BtgI CCRYGG 2 cut(s) 342, 602
BtsCI GGATG 8 cut(s) 105, 132, 381, 819, 954, 1051, 1111, 1423
BtsI GCAGTG 1 cut(s) 1138
BtsIMutI CAGTG 3 cut(s) 920, 1138, 1412
Cac8I GCNNGC 4 cut(s) 390, 1123, 1181, 1399
CfoI GCGC 2 cut(s) 601, 792
Cfr10I RCCGGY 2 cut(s) 595, 1121
Cfr9I CCCGGG 2 cut(s) 446, 586
CseI GACGC 3 cut(s) 319, 485, 983
Csp6I GTAC 5 cut(s) 475, 739, 901, 1172, 1216
CspCI CAANNNNNGTGG 6 cut(s) 826, 861, 1080, 1115, 1386, 1421
CviAII CATG 5 cut(s) 54, 220, 418, 463, 1261
CviQI GTAC 5 cut(s) 475, 739, 901, 1172, 1216
DdeI CTNAG 2 cut(s) 9, 1106
DinI GGCGCC 1 cut(s) 600
DraIII CACNNNGTG 1 cut(s) 394
EaeI YGGCCR 3 cut(s) 938, 1119, 1196
EagI CGGCCG 2 cut(s) 938, 1119
Eam1104I CTCTTC 5 cut(s) 53, 167, 614, 1014, 1335
EarI CTCTTC 5 cut(s) 53, 167, 614, 1014, 1335
EciI GGCGGA 1 cut(s) 570
Ecl136II GAGCTC 2 cut(s) 64, 624
EclXI CGGCCG 2 cut(s) 938, 1119
Eco105I TACGTA 1 cut(s) 474
Eco130I CCWWGG 2 cut(s) 500, 1296
Eco24I GRGCYC 4 cut(s) 66, 442, 626, 1090
Eco47I GGWCC 7 cut(s) 403, 548, 575, 719, 980, 1001, 1010
Eco52I CGGCCG 2 cut(s) 938, 1119
Eco53kI GAGCTC 2 cut(s) 64, 624
Eco57I CTGAAG 1 cut(s) 209
Eco72I CACGTG 2 cut(s) 648, 845
Eco88I CYCGRG 5 cut(s) 59, 233, 446, 586, 773
Eco91I GGTNACC 2 cut(s) 450, 1291
EcoICRI GAGCTC 2 cut(s) 64, 624
EcoO109I RGGNCCY 4 cut(s) 229, 719, 980, 1087
EcoO65I GGTNACC 2 cut(s) 450, 1291
EcoRI GAATTC 1 cut(s) 1150
EcoRII CCWGG 2 cut(s) 371, 550
EcoT14I CCWWGG 2 cut(s) 500, 1296
EcoT38I GRGCYC 4 cut(s) 66, 442, 626, 1090
EgeI GGCGCC 1 cut(s) 600
EheI GGCGCC 1 cut(s) 600
ErhI CCWWGG 2 cut(s) 500, 1296
FaeI CATG 5 cut(s) 57, 223, 421, 466, 1264
FaqI GGGAC 4 cut(s) 705, 742, 966, 1385
FatI CATG 5 cut(s) 53, 219, 417, 462, 1260
FauI CCCGC 2 cut(s) 1118, 1136
FauNDI CATATG 1 cut(s) 947
FbaI TGATCA 1 cut(s) 639
FblI GTMKAC 2 cut(s) 858, 932
Fnu4HI GCNGC 8 cut(s) 254, 369, 378, 566, 569, 874, 1184, 1362
FokI GGATG 8 cut(s) 92, 119, 368, 806, 941, 1058, 1098, 1430
FriOI GRGCYC 4 cut(s) 66, 442, 626, 1090
Fsp4HI GCNGC 8 cut(s) 254, 369, 378, 566, 569, 874, 1184, 1362
FspBI CTAG 1 cut(s) 17
GlaI GCGC 2 cut(s) 600, 791
GluI GCNGC 8 cut(s) 254, 369, 378, 566, 569, 874, 1184, 1362
GsaI CCCAGC 3 cut(s) 213, 253, 1087
GsuI CTGGAG 2 cut(s) 944, 1181
HaeII RGCGCY 1 cut(s) 602
HgaI GACGC 3 cut(s) 319, 485, 983
HhaI GCGC 2 cut(s) 601, 792
Hin1I GRCGYC 3 cut(s) 496, 599, 994
Hin1II CATG 5 cut(s) 57, 223, 421, 466, 1264
Hin6I GCGC 2 cut(s) 599, 790
HinP1I GCGC 2 cut(s) 599, 790
HincII GTYRAC 2 cut(s) 933, 1438
HindII GTYRAC 2 cut(s) 933, 1438
HinfI GANTC 9 cut(s) 13, 113, 337, 505, 755, 794, 833, 883, 929
HphI GGTGA 9 cut(s) 91, 115, 163, 183, 349, 504, 628, 892, 1249
Hpy166II GTNNAC 4 cut(s) 859, 933, 1013, 1438
Hpy188I TCNGA 8 cut(s) 118, 267, 407, 481, 688, 782, 1058, 1270
Hpy188III TCNNGA 5 cut(s) 334, 659, 674, 969, 1381
Hpy8I GTNNAC 4 cut(s) 859, 933, 1013, 1438
Hpy99I CGWCG 3 cut(s) 202, 416, 857
HpyAV CCTTC 1 cut(s) 452
HpyCH4III ACNGT 1 cut(s) 346
HpyCH4IV ACGT 6 cut(s) 473, 647, 664, 844, 861, 1174
HpyCH4V TGCA 1 cut(s) 69
HpyF10VI GCNNNNNNNGC 5 cut(s) 245, 374, 377, 552, 577
HpyF3I CTNAG 2 cut(s) 9, 1106
HpySE526I ACGT 6 cut(s) 473, 647, 664, 844, 861, 1174
Hsp92I GRCGYC 3 cut(s) 496, 599, 994
Hsp92II CATG 5 cut(s) 57, 223, 421, 466, 1264
HspAI GCGC 2 cut(s) 599, 790
KasI GGCGCC 1 cut(s) 598
KflI GGGWCCC 2 cut(s) 719, 980
Kpn2I TCCGGA 1 cut(s) 968
KroI GCCGGC 1 cut(s) 1121
KroNI GCCGGC 1 cut(s) 1123
Ksp22I TGATCA 1 cut(s) 639
LguI GCTCTTC 1 cut(s) 614
LmnI GCTCC 5 cut(s) 629, 733, 768, 907, 1257
Lsp1109I GCAGC 1 cut(s) 885
LweI GCATC 2 cut(s) 1036, 1408
MaeI CTAG 1 cut(s) 17
MaeII ACGT 6 cut(s) 473, 647, 664, 844, 861, 1174
MaeIII GTNAC 4 cut(s) 450, 510, 650, 1291
MboII GAAGA 7 cut(s) 40, 154, 343, 631, 1031, 1346, 1352
MflI RGATCY 4 cut(s) 262, 481, 777, 848
MhlI GDGCHC 5 cut(s) 27, 66, 442, 626, 1090
MlsI TGGCCA 1 cut(s) 1198
MluCI AATT 5 cut(s) 88, 1074, 1150, 1200, 1445
MluNI TGGCCA 1 cut(s) 1198
Mly113I GGCGCC 1 cut(s) 599
MlyI GAGTC 2 cut(s) 764, 938
MmeI TCCRAC 8 cut(s) 290, 430, 711, 805, 822, 982, 1023, 1036
Mox20I TGGCCA 1 cut(s) 1198
MroI TCCGGA 1 cut(s) 968
MroNI GCCGGC 1 cut(s) 1121
MroXI GAANNNNTTC 1 cut(s) 749
MscI TGGCCA 1 cut(s) 1198
Msp20I TGGCCA 1 cut(s) 1198
MvaI CCWGG 2 cut(s) 373, 552
MvnI CGCG 3 cut(s) 571, 632, 792
MwoI GCNNNNNNNGC 5 cut(s) 245, 374, 377, 552, 577
NaeI GCCGGC 1 cut(s) 1123
NarI GGCGCC 1 cut(s) 599
NdeI CATATG 1 cut(s) 947
NgoMIV GCCGGC 1 cut(s) 1121
NlaIII CATG 5 cut(s) 57, 223, 421, 466, 1264
NmuCI GTSAC 2 cut(s) 510, 650
NspI RCATGY 1 cut(s) 223
PaeR7I CTCGAG 2 cut(s) 59, 233
PciSI GCTCTTC 1 cut(s) 614
PcsI WCGNNNNNNNCGW 1 cut(s) 938
PdiI GCCGGC 1 cut(s) 1123
PdmI GAANNNNTTC 1 cut(s) 749
PfeI GAWTC 7 cut(s) 13, 113, 337, 505, 794, 833, 883
PfoI TCCNGGA 1 cut(s) 1368
PkrI GCNGC 8 cut(s) 255, 370, 379, 567, 570, 875, 1185, 1363
Ple19I CGATCG 1 cut(s) 1358
PleI GAGTC 2 cut(s) 763, 937
PluTI GGCGCC 1 cut(s) 602
PmaCI CACGTG 2 cut(s) 648, 845
PmlI CACGTG 2 cut(s) 648, 845
PpsI GAGTC 2 cut(s) 763, 937
Ppu21I YACGTR 5 cut(s) 474, 648, 845, 862, 1175
PpuMI RGGWCCY 2 cut(s) 719, 980
Psp124BI GAGCTC 2 cut(s) 66, 626
Psp5II RGGWCCY 2 cut(s) 719, 980
Psp6I CCWGG 2 cut(s) 371, 550
PspCI CACGTG 2 cut(s) 648, 845
PspEI GGTNACC 2 cut(s) 450, 1291
PspFI CCCAGC 3 cut(s) 209, 249, 1083
PspGI CCWGG 2 cut(s) 371, 550
PspOMI GGGCCC 1 cut(s) 1086
PspPPI RGGWCCY 2 cut(s) 719, 980
PspXI VCTCGAGB 2 cut(s) 59, 233
PsuI RGATCY 4 cut(s) 262, 481, 777, 848
PvuI CGATCG 1 cut(s) 1358
RsaI GTAC 5 cut(s) 476, 740, 902, 1173, 1217
RsaNI GTAC 5 cut(s) 475, 739, 901, 1172, 1216
SacI GAGCTC 2 cut(s) 66, 626
SalI GTCGAC 1 cut(s) 931
SapI GCTCTTC 1 cut(s) 614
SatI GCNGC 8 cut(s) 254, 369, 378, 566, 569, 874, 1184, 1362
ScaI AGTACT 2 cut(s) 740, 1217
SchI GAGTC 2 cut(s) 764, 938
SduI GDGCHC 5 cut(s) 27, 66, 442, 626, 1090
SfaNI GCATC 2 cut(s) 1036, 1408
SfiI GGCCNNNNNGGCC 1 cut(s) 374
SfoI GGCGCC 1 cut(s) 600
Sfr274I CTCGAG 2 cut(s) 59, 233
SinI GGWCC 7 cut(s) 403, 548, 575, 719, 980, 1001, 1010
SlaI CTCGAG 2 cut(s) 59, 233
SmaI CCCGGG 2 cut(s) 448, 588
SmlI CTYRAG 2 cut(s) 59, 233
SmoI CTYRAG 2 cut(s) 59, 233
SnaBI TACGTA 1 cut(s) 474
Sse9I AATT 5 cut(s) 88, 1074, 1150, 1200, 1445
SspDI GGCGCC 1 cut(s) 598
SspMI CTAG 1 cut(s) 17
SstI GAGCTC 2 cut(s) 66, 626
StyI CCWWGG 2 cut(s) 500, 1296
TaaI ACNGT 1 cut(s) 346
TaiI ACGT 6 cut(s) 476, 650, 667, 847, 864, 1177
TaqI TCGA 8 cut(s) 60, 111, 234, 660, 753, 831, 932, 1380
TasI AATT 5 cut(s) 88, 1074, 1150, 1200, 1445
TatI WGTACW 2 cut(s) 738, 1215
TauI GCSGC 7 cut(s) 256, 371, 380, 568, 571, 1186, 1364
TfiI GAWTC 7 cut(s) 13, 113, 337, 505, 794, 833, 883
TscAI CASTG 3 cut(s) 927, 1145, 1419
TseFI GTSAC 2 cut(s) 510, 650
TseI GCWGC 1 cut(s) 873
Tsp45I GTSAC 2 cut(s) 510, 650
TspDTI ATGAA 5 cut(s) 343, 434, 575, 934, 1353
TspGWI ACGGA 2 cut(s) 498, 841
TspMI CCCGGG 2 cut(s) 446, 586
TspRI CASTG 3 cut(s) 927, 1145, 1419
VpaK11BI GGWCC 7 cut(s) 403, 548, 575, 719, 980, 1001, 1010
XapI RAATTY 2 cut(s) 1150, 1445
XceI RCATGY 1 cut(s) 223
XhoI CTCGAG 2 cut(s) 59, 233
XmaI CCCGGG 2 cut(s) 446, 586
XmiI GTMKAC 2 cut(s) 858, 932
XmnI GAANNNNTTC 1 cut(s) 749
XspI CTAG 1 cut(s) 17
ZrmI AGTACT 2 cut(s) 740, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.