Rorug02G0091700

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000519
Physical Location & Seq
Reverse (-)
7417904 .. 7425020
7117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0091700.1

Sequence Viewer

Length: 1203 bp
ATGGGCTGCAAGCTAGAGATTCATCTAGTGTTCTCTCTCCCTTCCGTTTCTCCAGAAGGGAAACCGGAGAGAGACGTGACGTTCAAAGTGTTGTACTGTGGGATTTGCCATTCGGACCTTCACAATGTCAAGAATGAATGGGGCATCTCTACCTATGCTCTGGTTCCCGGCCATGAGATTGTTGGTGAAGTAACGGAAGTAGGAAGCAATGTACAAAAATTCAAAGTTCGAGACAGAGTCGGTGTTGGATGCTTAGTGGGAGCTTGCCAATCTTGTGATAGTTGTACAAACCACCTTGAGAACTACTGCCCCAAACAAATACTCACGTACGGTGCCAAGTACTACGACGAAACCACCACCTATGGAGACAAGCCCGGAATGCAAGTGGGTGTGGTTGGCCTAGGCAGTTTAGGCCACATCGCGGTGAAGTTTGCCAAGGCTATGGGAGTGAAGGTTACAATGATCAGTACTTCCCCTGAGAAAGAGGAGGAAGCTATTAAACACCTTGGAGCTGACTCGTTTTTGGTTAGTCGTGACCAAGATCTAATGCAGGCTGCCATTGGTACCATGGATGAGATCATTGACATGGTTTCTGCACAACATCCTCTCTTGCCTTTGATTGGTTTGTTGAAGTCTCATGGAAAGTTGTTATGTGTAGGGTTATTAATGGTCGACTTAACAGGAAGGAAGATGGTAGCTAGTAGCTTCATTGGAGGCGTGCCAGCACCATGGGGTGCAGTCGTCGGAGAATCCCTTGACCTGACTTCTGAATCAAACGTTGTGGACGAGGAGAGCACCAACCTCGTCACCAGGTTCTTCTCTATGCCTTCCGGAAAAGGACTTCTTGCCTTACTGGTAAGGACTTGTGTTGTGATCTCTTCGCGTCACCGAATCGATACTCAACGTTGTAGGTTGAACAGAGCAATCACTGGGAAGTTTGGAGAAAGCACGGGTTTGCTAAAGCGTATCTTTAGCTTCGCTGGGTTGCGAGGGCGTTACTCTTGCTTTGCTGGGTTGCAACTAGGTTGCAGTATGAAGGAGACACAAGAGATGATCAATTTTGCAGCCAAGCACAACATAACAGCAGACATCGAGGTTATCCCAATTGACTACTTGAACAATGCCATGGAGCGCCTTGCCAAAGCAGATGTCAGATATCGTTTTGTCATTGACATTGGAAACACACTGAAGGCCAACCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3

Protein Analysis

400

Amino Acids

43.52

Weight (kDa)

7.13

Isoelectric Point (pI)

30.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 24 - 111 5.4e-19 Alcohol dehydrogenase GroES-like domain
2-Hacid_dh_C PF02826 122 - 169 9e-06 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ADH_zinc_N PF00107 137 - 223 2.9e-12 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000519)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g27751 FvH4_2g10620 FvH4_4g13701 FvH4_4g17370 FvH4_6g49051
pyrus_communis pycom11g18020
rosa_chinensis RchiOBHm_Chr1g0331041 RchiOBHm_Chr2g0088901 RchiOBHm_Chr2g0100641 RchiOBHm_Chr6g0281891
rosa_laevigata RLG00000011791 RLG00000028155 RLG00000035981
rosa_multiflora Rmu_co8368635.1_g000001 Rmu_co8370105.1_g000001 Rmu_sc0000850.1_g000010 Rmu_sc0001374.1_g000060 Rmu_sc0001654.1_g000024 Rmu_sc0001840.1_g000023 Rmu_sc0001900.1_g000032 Rmu_sc0002687.1_g000008 Rmu_sc0003133.1_g000026 Rmu_sc0003252.1_g000002 Rmu_sc0004206.1_g000011 Rmu_sc0004666.1_g000002 Rmu_sc0006255.1_g000004 Rmu_sc0006812.1_g000001 Rmu_sc0007025.1_g000012 Rmu_sc0007767.1_g000020 Rmu_sc0007833.1_g000004 Rmu_sc0007848.1_g000020 Rmu_sc0007883.1_g000010 Rmu_sc0008270.1_g000003 Rmu_sc0012097.1_g000011 Rmu_sc0014445.1_g000002 Rmu_sc0023292.1_g000001
rosa_roxburghii Rroxscaffold_1G00021670 Rroxscaffold_1G00027660 Rroxscaffold_1G00056090 Rroxscaffold_2G00111250 Rroxscaffold_2G00111320 Rroxscaffold_3G00248390 Rroxscaffold_6G00394880 Rroxscaffold_7G00192450
rosa_rugosa Rorug01G0071500 Rorug01G0183900 Rorug01G0242400 Rorug02G0045300 Rorug02G0051000 Rorug02G0061700 Rorug02G0091500 Rorug02G0091600 Rorug02G0091700 Rorug02G0091800 Rorug02G0284700 Rorug02G0335100 Rorug02G0336900 Rorug02G0405500.1 Rorug02G0498300 Rorug03G0173700 Rorug03G0228900 Rorug03G0256300 Rorug04G0014300 Rorug04G0130400 Rorug04G0138100 Rorug04G0138100 Rorug04G0150400.1 Rorug05G0000600 Rorug05G0160400 Rorug05G0165600 Rorug05G0378500 Rorug06G0072000 Rorug06G0107900 Rorug06G0268700 Rorug07G0015500 Rorug07G0266300 Rorug07G0274500
rosa_samantha Rh2AG439400 Rh2AG561100 Rh2DG459400 Rh3AG236100 Rh4BG212500 Rh6AG046300 Rh6BG073000 Rh7DG249100
rosa_wichuraiana Rw2G010910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 563
AccB1I GGYRCC 2 cut(s) 332, 563
AccI GTMKAC 1 cut(s) 672
AccII CGCG 2 cut(s) 422, 883
AccIII TCCGGA 1 cut(s) 830
AciI CCGC 1 cut(s) 422
AclI AACGTT 2 cut(s) 777, 904
AcoI YGGCCR 1 cut(s) 169
AcsI RAATTY 1 cut(s) 218
AfaI GTAC 7 cut(s) 95, 213, 286, 329, 341, 469, 565
AfiI CCNNNNNNNGG 2 cut(s) 421, 620
AgsI TTSAA 5 cut(s) 85, 223, 631, 916, 1117
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 1 cut(s) 809
AluBI AGCT 7 cut(s) 13, 263, 494, 512, 698, 705, 975
AluI AGCT 7 cut(s) 13, 263, 494, 512, 698, 705, 975
Alw21I GWGCWC 1 cut(s) 797
Alw26I GTCTC 5 cut(s) 66, 225, 360, 639, 1034
Aor13HI TCCGGA 1 cut(s) 830
AoxI GGCC 4 cut(s) 169, 397, 412, 1191
ApeKI GCWGC 3 cut(s) 6, 554, 1064
ApoI RAATTY 1 cut(s) 218
ArsI GACNNNNNNTTYG 2 cut(s) 1134, 1166
AseI ATTAAT 1 cut(s) 665
Asp718I GGTACC 1 cut(s) 563
AspA2I CCTAGG 1 cut(s) 400
AspLEI GCGC 1 cut(s) 1134
AspS9I GGNCC 1 cut(s) 115
AsuC2I CCSGG 2 cut(s) 168, 375
AsuHPI GGTGA 4 cut(s) 197, 436, 799, 878
AvaII GGWCC 1 cut(s) 115
AvrII CCTAGG 1 cut(s) 400
BanI GGYRCC 2 cut(s) 332, 563
Bbv12I GWGCWC 1 cut(s) 797
BbvI GCAGC 2 cut(s) 541, 1076
BccI CCATC 1 cut(s) 685
BcgI CGANNNNNNTGC 2 cut(s) 784, 818
BciT130I CCWGG 1 cut(s) 811
BclI TGATCA 2 cut(s) 462, 1053
BcnI CCSGG 2 cut(s) 168, 375
BcoDI GTCTC 5 cut(s) 66, 225, 360, 639, 1034
BfaI CTAG 5 cut(s) 14, 26, 401, 699, 1022
BfoI RGCGCY 1 cut(s) 1135
BglII AGATCT 1 cut(s) 541
BisI GCNGC 3 cut(s) 7, 555, 1065
BlnI CCTAGG 1 cut(s) 400
BlsI GCNGC 3 cut(s) 8, 556, 1066
BmcAI AGTACT 2 cut(s) 341, 469
Bme1390I CCNGG 3 cut(s) 168, 375, 811
Bme18I GGWCC 1 cut(s) 115
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 1 cut(s) 115
BmiI GGNNCC 3 cut(s) 165, 334, 565
BmrFI CCNGG 3 cut(s) 168, 375, 811
BmrI ACTGGG 1 cut(s) 939
BmsI GCATC 2 cut(s) 153, 239
BmuI ACTGGG 1 cut(s) 939
BpmI CTGGAG 1 cut(s) 36
BpuEI CTTGAG 1 cut(s) 317
BpuMI CCSGG 2 cut(s) 168, 375
Bsa29I ATCGAT 1 cut(s) 894
BsaAI YACGTR 1 cut(s) 327
BsaJI CCNNGG 6 cut(s) 400, 435, 505, 567, 728, 1125
BsaWI WCCGGW 2 cut(s) 64, 830
BsaXI ACNNNNNCTCC 2 cut(s) 438, 468
Bsc4I CCNNNNNNNGG 2 cut(s) 421, 620
Bse1I ACTGG 2 cut(s) 858, 934
Bse3DI GCAATG 1 cut(s) 214
BseAI TCCGGA 1 cut(s) 830
BseBI CCWGG 1 cut(s) 811
BseCI ATCGAT 1 cut(s) 894
BseDI CCNNGG 6 cut(s) 400, 435, 505, 567, 728, 1125
BseGI GGATG 3 cut(s) 254, 577, 601
BseLI CCNNNNNNNGG 2 cut(s) 421, 620
BseMI GCAATG 1 cut(s) 214
BseMII CTCAG 1 cut(s) 468
BseNI ACTGG 2 cut(s) 858, 934
BseRI GAGGAG 2 cut(s) 500, 803
BseXI GCAGC 2 cut(s) 541, 1076
BseYI CCCAGC 2 cut(s) 980, 1010
BsgI GTGCAG 2 cut(s) 579, 756
Bsh1236I CGCG 2 cut(s) 422, 883
BshFI GGCC 4 cut(s) 171, 399, 414, 1193
BshNI GGYRCC 2 cut(s) 332, 563
BshVI ATCGAT 1 cut(s) 894
BsiHKAI GWGCWC 1 cut(s) 797
BsiSI CCGG 4 cut(s) 65, 168, 375, 831
BsiWI CGTACG 1 cut(s) 327
BslI CCNNNNNNNGG 2 cut(s) 421, 620
BsmAI GTCTC 5 cut(s) 66, 225, 360, 639, 1034
BsmBI CGTCTC 1 cut(s) 66
BsmI GAATGC 1 cut(s) 384
BsnI GGCC 4 cut(s) 171, 399, 414, 1193
Bsp1286I GDGCHC 1 cut(s) 797
Bsp13I TCCGGA 1 cut(s) 830
Bsp1407I TGTACA 2 cut(s) 211, 284
Bsp143I GATC 5 cut(s) 462, 541, 576, 873, 1053
Bsp19I CCATGG 3 cut(s) 567, 728, 1125
BspACI CCGC 1 cut(s) 422
BspANI GGCC 4 cut(s) 171, 399, 414, 1193
BspCNI CTCAG 1 cut(s) 469
BspDI ATCGAT 1 cut(s) 894
BspEI TCCGGA 1 cut(s) 830
BspFNI CGCG 2 cut(s) 422, 883
BspLI GGNNCC 3 cut(s) 165, 334, 565
BspT107I GGYRCC 2 cut(s) 332, 563
BsrDI GCAATG 1 cut(s) 214
BsrGI TGTACA 2 cut(s) 211, 284
BsrI ACTGG 2 cut(s) 858, 934
BssECI CCNNGG 6 cut(s) 400, 435, 505, 567, 728, 1125
BssMI GATC 5 cut(s) 462, 541, 576, 873, 1053
BssT1I CCWWGG 6 cut(s) 400, 435, 505, 567, 728, 1125
Bst2UI CCWGG 1 cut(s) 811
Bst4CI ACNGT 2 cut(s) 98, 332
Bst6I CTCTTC 1 cut(s) 883
BstAUI TGTACA 2 cut(s) 211, 284
BstBAI YACGTR 1 cut(s) 327
BstC8I GCNNGC 5 cut(s) 11, 265, 552, 719, 723
BstDEI CTNAG 2 cut(s) 253, 477
BstDSI CCRYGG 3 cut(s) 567, 728, 1125
BstF5I GGATG 3 cut(s) 254, 577, 601
BstFNI CGCG 2 cut(s) 422, 883
BstH2I RGCGCY 1 cut(s) 1135
BstHHI GCGC 1 cut(s) 1134
BstKTI GATC 5 cut(s) 465, 544, 579, 876, 1056
BstMAI GTCTC 5 cut(s) 66, 225, 360, 639, 1034
BstMBI GATC 5 cut(s) 462, 541, 576, 873, 1053
BstMWI GCNNNNNNNGC 2 cut(s) 379, 411
BstNI CCWGG 1 cut(s) 811
BstSCI CCNGG 3 cut(s) 166, 373, 809
BstUI CGCG 2 cut(s) 422, 883
BstV1I GCAGC 2 cut(s) 541, 1076
BstX2I RGATCY 1 cut(s) 541
BstXI CCANNNNNNTGG 2 cut(s) 442, 729
BstYI RGATCY 1 cut(s) 541
Bsu15I ATCGAT 1 cut(s) 894
BsuRI GGCC 4 cut(s) 171, 399, 414, 1193
BsuTUI ATCGAT 1 cut(s) 894
BtgI CCRYGG 3 cut(s) 567, 728, 1125
BtgZI GCGATG 1 cut(s) 403
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 3 cut(s) 254, 577, 601
BtsIMutI CAGTG 2 cut(s) 927, 1184
Cac8I GCNNGC 5 cut(s) 11, 265, 552, 719, 723
CfoI GCGC 1 cut(s) 1134
Cfr13I GGNCC 1 cut(s) 115
ClaI ATCGAT 1 cut(s) 894
CseI GACGC 1 cut(s) 872
CsiI ACCWGGT 1 cut(s) 809
Csp6I GTAC 7 cut(s) 94, 212, 285, 328, 340, 468, 564
CspCI CAANNNNNGTGG 2 cut(s) 762, 797
CviAII CATG 6 cut(s) 173, 568, 586, 638, 729, 1126
CviQI GTAC 7 cut(s) 94, 212, 285, 328, 340, 468, 564
DdeI CTNAG 2 cut(s) 253, 477
DpnI GATC 5 cut(s) 464, 543, 578, 875, 1055
DpnII GATC 5 cut(s) 462, 541, 576, 873, 1053
EaeI YGGCCR 1 cut(s) 169
Eam1104I CTCTTC 1 cut(s) 883
EarI CTCTTC 1 cut(s) 883
Eco130I CCWWGG 6 cut(s) 400, 435, 505, 567, 728, 1125
Eco32I GATATC 1 cut(s) 1157
Eco47I GGWCC 1 cut(s) 115
EcoRII CCWGG 1 cut(s) 809
EcoRV GATATC 1 cut(s) 1157
EcoT14I CCWWGG 6 cut(s) 400, 435, 505, 567, 728, 1125
ErhI CCWWGG 6 cut(s) 400, 435, 505, 567, 728, 1125
Esp3I CGTCTC 1 cut(s) 66
FaeI CATG 6 cut(s) 176, 571, 589, 641, 732, 1129
FalI AAGNNNNNCTT 4 cut(s) 828, 860, 953, 985
FatI CATG 6 cut(s) 172, 567, 585, 637, 728, 1125
FbaI TGATCA 2 cut(s) 462, 1053
FblI GTMKAC 1 cut(s) 672
Fnu4HI GCNGC 3 cut(s) 7, 555, 1065
FokI GGATG 3 cut(s) 261, 584, 588
Fsp4HI GCNGC 3 cut(s) 7, 555, 1065
FspBI CTAG 5 cut(s) 14, 26, 401, 699, 1022
GlaI GCGC 1 cut(s) 1133
GluI GCNGC 3 cut(s) 7, 555, 1065
GsaI CCCAGC 2 cut(s) 984, 1014
GsuI CTGGAG 1 cut(s) 36
HaeII RGCGCY 1 cut(s) 1135
HaeIII GGCC 4 cut(s) 171, 399, 414, 1193
HapII CCGG 4 cut(s) 65, 168, 375, 831
HgaI GACGC 1 cut(s) 872
HhaI GCGC 1 cut(s) 1134
Hin1II CATG 6 cut(s) 176, 571, 589, 641, 732, 1129
Hin6I GCGC 1 cut(s) 1132
HinP1I GCGC 1 cut(s) 1132
HincII GTYRAC 1 cut(s) 673
HindII GTYRAC 1 cut(s) 673
HinfI GANTC 6 cut(s) 19, 237, 515, 749, 770, 891
HpaII CCGG 4 cut(s) 65, 168, 375, 831
HphI GGTGA 4 cut(s) 197, 436, 799, 878
Hpy166II GTNNAC 2 cut(s) 673, 784
Hpy188I TCNGA 4 cut(s) 115, 746, 769, 1154
Hpy188III TCNNGA 5 cut(s) 53, 130, 230, 533, 831
Hpy8I GTNNAC 2 cut(s) 673, 784
Hpy99I CGWCG 2 cut(s) 350, 746
HpyAV CCTTC 8 cut(s) 50, 51, 128, 445, 678, 837, 1030, 1183
HpyCH4III ACNGT 2 cut(s) 98, 332
HpyCH4IV ACGT 5 cut(s) 75, 80, 326, 777, 904
HpyCH4V TGCA 8 cut(s) 9, 382, 550, 596, 737, 1018, 1029, 1064
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 411
HpyF3I CTNAG 2 cut(s) 253, 477
HpySE526I ACGT 5 cut(s) 75, 80, 326, 777, 904
Hsp92II CATG 6 cut(s) 176, 571, 589, 641, 732, 1129
HspAI GCGC 1 cut(s) 1132
Kpn2I TCCGGA 1 cut(s) 830
KpnI GGTACC 1 cut(s) 567
Ksp22I TGATCA 2 cut(s) 462, 1053
Kzo9I GATC 5 cut(s) 462, 541, 576, 873, 1053
LmnI GCTCC 3 cut(s) 260, 509, 1129
Lsp1109I GCAGC 2 cut(s) 541, 1076
LweI GCATC 2 cut(s) 153, 239
MabI ACCWGGT 1 cut(s) 809
MaeI CTAG 5 cut(s) 14, 26, 401, 699, 1022
MaeII ACGT 5 cut(s) 75, 80, 326, 777, 904
MaeIII GTNAC 7 cut(s) 76, 190, 454, 533, 805, 884, 995
MalI GATC 5 cut(s) 464, 543, 578, 875, 1055
MboI GATC 5 cut(s) 462, 541, 576, 873, 1053
MboII GAAGA 3 cut(s) 700, 808, 870
MfeI CAATTG 1 cut(s) 1104
MflI RGATCY 1 cut(s) 541
MhlI GDGCHC 1 cut(s) 797
MluCI AATT 3 cut(s) 218, 1057, 1104
MlyI GAGTC 2 cut(s) 246, 509
MmeI TCCRAC 2 cut(s) 226, 724
MnlI CCTC 8 cut(s) 478, 481, 615, 707, 781, 812, 983, 1087
MroI TCCGGA 1 cut(s) 830
MseI TTAA 4 cut(s) 498, 665, 677, 1201
MslI CAYNNNNRTG 2 cut(s) 422, 584
MspI CCGG 4 cut(s) 65, 168, 375, 831
MspR9I CCNGG 3 cut(s) 168, 375, 811
MunI CAATTG 1 cut(s) 1104
Mva1269I GAATGC 1 cut(s) 384
MvaI CCWGG 1 cut(s) 811
MvnI CGCG 2 cut(s) 422, 883
MwoI GCNNNNNNNGC 2 cut(s) 379, 411
NciI CCSGG 2 cut(s) 168, 375
NcoI CCATGG 3 cut(s) 567, 728, 1125
NdeII GATC 5 cut(s) 462, 541, 576, 873, 1053
NlaIII CATG 6 cut(s) 176, 571, 589, 641, 732, 1129
NlaIV GGNNCC 3 cut(s) 165, 334, 565
NmuCI GTSAC 4 cut(s) 76, 533, 805, 884
PcsI WCGNNNNNNNCGW 1 cut(s) 783
PctI GAATGC 1 cut(s) 384
PfeI GAWTC 4 cut(s) 19, 749, 770, 891
Pfl23II CGTACG 1 cut(s) 327
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 3 cut(s) 8, 556, 1066
PleI GAGTC 2 cut(s) 245, 509
PpsI GAGTC 2 cut(s) 245, 509
Ppu21I YACGTR 1 cut(s) 327
PshBI ATTAAT 1 cut(s) 665
Psp1406I AACGTT 2 cut(s) 777, 904
Psp6I CCWGG 1 cut(s) 809
PspFI CCCAGC 2 cut(s) 980, 1010
PspGI CCWGG 1 cut(s) 809
PspLI CGTACG 1 cut(s) 327
PspN4I GGNNCC 3 cut(s) 165, 334, 565
PspPI GGNCC 1 cut(s) 115
PsuI RGATCY 1 cut(s) 541
PsyI GACNNNGTC 1 cut(s) 236
RsaI GTAC 7 cut(s) 95, 213, 286, 329, 341, 469, 565
RsaNI GTAC 7 cut(s) 94, 212, 285, 328, 340, 468, 564
RseI CAYNNNNRTG 2 cut(s) 422, 584
SalI GTCGAC 1 cut(s) 671
SaqAI TTAA 4 cut(s) 498, 665, 677, 1201
SatI GCNGC 3 cut(s) 7, 555, 1065
Sau3AI GATC 5 cut(s) 462, 541, 576, 873, 1053
Sau96I GGNCC 1 cut(s) 115
ScaI AGTACT 2 cut(s) 341, 469
SchI GAGTC 2 cut(s) 246, 509
ScrFI CCNGG 3 cut(s) 168, 375, 811
SduI GDGCHC 1 cut(s) 797
SexAI ACCWGGT 1 cut(s) 809
SfaNI GCATC 2 cut(s) 153, 239
SinI GGWCC 1 cut(s) 115
SmiMI CAYNNNNRTG 2 cut(s) 422, 584
SmlI CTYRAG 1 cut(s) 296
SmoI CTYRAG 1 cut(s) 296
Sse9I AATT 3 cut(s) 218, 1057, 1104
SsiI CCGC 1 cut(s) 422
SspMI CTAG 5 cut(s) 14, 26, 401, 699, 1022
StyD4I CCNGG 3 cut(s) 166, 373, 809
StyI CCWWGG 6 cut(s) 400, 435, 505, 567, 728, 1125
TaaI ACNGT 2 cut(s) 98, 332
TaiI ACGT 5 cut(s) 78, 83, 329, 780, 907
TaqI TCGA 4 cut(s) 229, 672, 894, 1092
TasI AATT 3 cut(s) 218, 1057, 1104
TatI WGTACW 5 cut(s) 93, 211, 284, 339, 467
TfiI GAWTC 4 cut(s) 19, 749, 770, 891
Tru1I TTAA 4 cut(s) 498, 665, 677, 1201
Tru9I TTAA 4 cut(s) 498, 665, 677, 1201
TscAI CASTG 2 cut(s) 934, 1191
TseFI GTSAC 4 cut(s) 76, 533, 805, 884
TseI GCWGC 3 cut(s) 6, 554, 1064
Tsp45I GTSAC 4 cut(s) 76, 533, 805, 884
TspDTI ATGAA 4 cut(s) 11, 150, 697, 1049
TspGWI ACGGA 2 cut(s) 34, 209
TspRI CASTG 2 cut(s) 934, 1191
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 1 cut(s) 115
VspI ATTAAT 1 cut(s) 665
XapI RAATTY 1 cut(s) 218
XcmI CCANNNNNNNNNTGG 2 cut(s) 179, 565
XmaJI CCTAGG 1 cut(s) 400
XmiI GTMKAC 1 cut(s) 672
XspI CTAG 5 cut(s) 14, 26, 401, 699, 1022
ZrmI AGTACT 2 cut(s) 341, 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.