Rorug02G0091500

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000519
Physical Location & Seq
Forward (+)
7355493 .. 7357316
1824 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0091500.1

Sequence Viewer

Length: 1506 bp
ATGGCTAGCGTCATAGAGATTTCGAGCAGTGAGGATTCCGGGTCTGACGTGTTGCTCAGCGGTTCAGATAGGATGTTTATTGACTCGTTGCGTCTGTCTGCCTTTACAGGAACCTCATTGCCGGAACCGCTAGATATTGAACCCTTACAAACCATACCTTCGGAAGTGGCTATGGCTCGCGGTGGGCGTCCGAAAAGTTCGACGGCAAGGGAAGAACCTGCCGCCCGTAAGCGGCGCGAGGAGAGGCTAGCTAACCATAGTGTGGCTAGTGATTCCGCTGGTGGGGAAGATGCCGGTGGTGAAGAGATAGAGTTGGCTTGGGTTCTTCGTGATGGTACGCCGGTTGAAGAGGCGGCCAGTCCGATGACTGCGTCGGCTGTCAACCGTCTGAAGAGTGTGGACGAGAAGGCGGCAATTCTGCCGGTGGGGTACGCCGCCGTTCACGAGGCCATCTTCCGCCAGGGAGTAACTCTACCGCTACTGCCAAACCTCCAGATTTTGATTTGCGAGTTCGACCTTGCCTTTGGGCAAATTTTCCCTAATATGTGGCGATTATTGAATGCGCTCAACTCACTCTGGCGGCTTTCTGGCTGCGAAGGTCTGACCGTGGCACAGGTGCTGCACTTCTACAAACTGGTTTACATGAGGCGCCAGGGTTGTAGAGGACAGTATGACGCGGGGGAGAATGAGGAGGCGCCGACATTTAGGATTAAGTCGGAGTTCCAACCTATCCGAGCGGGCCTGCGCTATATGCTGACGCGCGAGGAGCAGTGCCGCATAGCAAGGATCAAAGGGTGTTGGCAGAACAACAACTTACTAGATCTCCGTCTGTTGACCGGCTGGGAGCTGTTGGTCGATTTGAAATTGACTCGTGCCCTTGATTCCGTTCCTGGTAACAAAGCCAGCCGCGACGCTTTTTCCAAAGCCATGGACCATGCGGATCTGCATAACTTTATTGAGGGCATGTATGCAGCTGGGCTTAGCGCGAAGCAGACCGTGGTTGATCCTCAAACGCAGGCGCTGAGCCACTCGGAGGTTGAGGTGGTGATGTCGATGCCCCATCACTCCCATCTCGCCGCTGCCGGTCAGACTGTTCTGCAGCTCGAGTCTCGCGCCGAGCGTGGGGCTGCTGGCGGGAGTCAGGCGCGTGTTGCTCCCGAGAAGCCCAAGGAGAGAGTGCCCACCAATCGGCGTGGGCCCCAGAGGGAGAGGGCGGTGCCGACGAAGGAGCCCGTTGCCATTGCGGGCCTGGAGCCACATGATCCGCCGAGGGTCACCACTCAGGGTCCTCTGCAGAAGAAACGGCGGCAGAATGACCCCGTCGAAGGGGAGAAGGCAGAGGACTCGGTGCCAATTGGGATCCGCCAGCAGAAGAGGGCGAGGCAGGCCTCGCAGAAGGTGACTGTGGCCGTCGCCGGGGAAGTGCCGACGAATGGGCTAGACTCGTTTGCAGCCTACACCGAGTTCCTGACGGATCTTGAGCAGGAATTCCTCTTCCATCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3

Protein Analysis

501

Amino Acids

55.03

Weight (kDa)

5.97

Isoelectric Point (pI)

54.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000519)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g27751 FvH4_2g10620 FvH4_4g13701 FvH4_4g17370 FvH4_6g49051
pyrus_communis pycom11g18020
rosa_chinensis RchiOBHm_Chr1g0331041 RchiOBHm_Chr2g0088901 RchiOBHm_Chr2g0100641 RchiOBHm_Chr6g0281891
rosa_laevigata RLG00000011791 RLG00000028155 RLG00000035981
rosa_multiflora Rmu_co8368635.1_g000001 Rmu_co8370105.1_g000001 Rmu_sc0000850.1_g000010 Rmu_sc0001374.1_g000060 Rmu_sc0001654.1_g000024 Rmu_sc0001840.1_g000023 Rmu_sc0001900.1_g000032 Rmu_sc0002687.1_g000008 Rmu_sc0003133.1_g000026 Rmu_sc0003252.1_g000002 Rmu_sc0004206.1_g000011 Rmu_sc0004666.1_g000002 Rmu_sc0006255.1_g000004 Rmu_sc0006812.1_g000001 Rmu_sc0007025.1_g000012 Rmu_sc0007767.1_g000020 Rmu_sc0007833.1_g000004 Rmu_sc0007848.1_g000020 Rmu_sc0007883.1_g000010 Rmu_sc0008270.1_g000003 Rmu_sc0012097.1_g000011 Rmu_sc0014445.1_g000002 Rmu_sc0023292.1_g000001
rosa_roxburghii Rroxscaffold_1G00021670 Rroxscaffold_1G00027660 Rroxscaffold_1G00056090 Rroxscaffold_2G00111250 Rroxscaffold_2G00111320 Rroxscaffold_3G00248390 Rroxscaffold_6G00394880 Rroxscaffold_7G00192450
rosa_rugosa Rorug01G0071500 Rorug01G0183900 Rorug01G0242400 Rorug02G0045300 Rorug02G0051000 Rorug02G0061700 Rorug02G0091500 Rorug02G0091600 Rorug02G0091700 Rorug02G0091800 Rorug02G0284700 Rorug02G0335100 Rorug02G0336900 Rorug02G0405500.1 Rorug02G0498300 Rorug03G0173700 Rorug03G0228900 Rorug03G0256300 Rorug04G0014300 Rorug04G0130400 Rorug04G0138100 Rorug04G0138100 Rorug04G0150400.1 Rorug05G0000600 Rorug05G0160400 Rorug05G0165600 Rorug05G0378500 Rorug06G0072000 Rorug06G0107900 Rorug06G0268700 Rorug07G0015500 Rorug07G0266300 Rorug07G0274500
rosa_samantha Rh2AG439400 Rh2AG561100 Rh2DG459400 Rh3AG236100 Rh4BG212500 Rh6AG046300 Rh6BG073000 Rh7DG249100
rosa_wichuraiana Rw2G010910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 226
AccB1I GGYRCC 4 cut(s) 648, 694, 1216, 1348
AccB7I CCANNNNNTGG 1 cut(s) 262
AccBSI CCGCTC 1 cut(s) 737
AccII CGCG 9 cut(s) 180, 237, 677, 760, 762, 909, 986, 1113, 1147
AclWI GGATC 7 cut(s) 794, 948, 998, 1256, 1354, 1367, 1482
AcoI YGGCCR 2 cut(s) 354, 1407
AcsI RAATTY 2 cut(s) 531, 1487
AcuI CTGAAG 1 cut(s) 410
AcyI GRCGYC 3 cut(s) 187, 649, 695
AfaI GTAC 2 cut(s) 337, 431
AflIII ACRYGT 1 cut(s) 48
AgsI TTSAA 4 cut(s) 140, 347, 559, 862
AjiI CACGTC 1 cut(s) 49
AjnI CCWGG 4 cut(s) 459, 651, 889, 1248
AluBI AGCT 4 cut(s) 251, 847, 974, 1102
AluI AGCT 4 cut(s) 251, 847, 974, 1102
Alw26I GTCTC 1 cut(s) 1113
AlwI GGATC 7 cut(s) 794, 948, 998, 1256, 1354, 1367, 1482
AlwNI CAGNNNCTG 2 cut(s) 619, 1021
Ama87I CYCGRG 2 cut(s) 1103, 1157
AoxI GGCC 7 cut(s) 354, 447, 739, 1196, 1246, 1386, 1407
ApaI GGGCCC 1 cut(s) 1200
ApeKI GCWGC 7 cut(s) 591, 619, 971, 1079, 1099, 1127, 1451
ApoI RAATTY 2 cut(s) 531, 1487
ArsI GACNNNNNNTTYG 2 cut(s) 506, 538
AspS9I GGNCC 6 cut(s) 739, 931, 1196, 1197, 1246, 1286
AsuC2I CCSGG 2 cut(s) 40, 1417
AsuHPI GGTGA 4 cut(s) 311, 1057, 1267, 1411
AsuNHI GCTAGC 2 cut(s) 5, 247
AvaI CYCGRG 2 cut(s) 1103, 1157
AvaII GGWCC 2 cut(s) 931, 1286
BaeGI GKGCMC 3 cut(s) 877, 1182, 1200
BaeI ACNNNNGTAYC 2 cut(s) 327, 360
BamHI GGATCC 1 cut(s) 1359
BanI GGYRCC 4 cut(s) 648, 694, 1216, 1348
BanII GRGCYC 2 cut(s) 1200, 1233
BauI CACGAG 2 cut(s) 443, 870
BbvI GCAGC 7 cut(s) 578, 606, 983, 1066, 1111, 1114, 1463
BccI CCATC 4 cut(s) 326, 458, 1068, 1077
BceAI ACGGC 4 cut(s) 219, 422, 1319, 1394
BcgI CGANNNNNNTGC 2 cut(s) 1326, 1360
BciT130I CCWGG 4 cut(s) 461, 653, 891, 1250
BcnI CCSGG 2 cut(s) 40, 1417
BcoDI GTCTC 1 cut(s) 1113
BfaI CTAG 6 cut(s) 6, 131, 248, 267, 818, 1439
BfmI CTRYAG 2 cut(s) 1097, 1292
BfoI RGCGCY 3 cut(s) 652, 698, 1022
BfuAI ACCTGC 1 cut(s) 226
BglII AGATCT 1 cut(s) 820
BlpI GCTNAGC 3 cut(s) 56, 980, 1022
Bme1390I CCNGG 6 cut(s) 40, 461, 653, 891, 1250, 1417
Bme18I GGWCC 2 cut(s) 931, 1286
BmeT110I CYCGRG 2 cut(s) 1103, 1157
BmgBI CACGTC 1 cut(s) 49
BmgT120I GGNCC 6 cut(s) 739, 931, 1196, 1197, 1246, 1286
BmrFI CCNGG 6 cut(s) 40, 461, 653, 891, 1250, 1417
BmsI GCATC 2 cut(s) 280, 1044
BmtI GCTAGC 2 cut(s) 9, 251
BpmI CTGGAG 2 cut(s) 476, 1271
Bpu1102I GCTNAGC 3 cut(s) 56, 980, 1022
BpuEI CTTGAG 1 cut(s) 1499
BpuMI CCSGG 2 cut(s) 40, 1417
BsaHI GRCGYC 3 cut(s) 187, 649, 695
BsaJI CCNNGG 8 cut(s) 460, 606, 652, 927, 996, 1167, 1268, 1416
BsaXI ACNNNNNCTCC 2 cut(s) 807, 837
Bse118I RCCGGY 5 cut(s) 293, 340, 421, 836, 1082
Bse1I ACTGG 2 cut(s) 357, 639
Bse3DI GCAATG 2 cut(s) 116, 1239
BseBI CCWGG 4 cut(s) 461, 653, 891, 1250
BseDI CCNNGG 8 cut(s) 460, 606, 652, 927, 996, 1167, 1268, 1416
BseGI GGATG 1 cut(s) 78
BseMI GCAATG 2 cut(s) 116, 1239
BseMII CTCAG 3 cut(s) 70, 1013, 1295
BseNI ACTGG 2 cut(s) 357, 639
BseRI GAGGAG 3 cut(s) 254, 704, 779
BseSI GKGCMC 3 cut(s) 877, 1182, 1200
BseXI GCAGC 7 cut(s) 578, 606, 983, 1066, 1111, 1114, 1463
BseYI CCCAGC 2 cut(s) 840, 974
BsgI GTGCAG 1 cut(s) 605
Bsh1236I CGCG 9 cut(s) 180, 237, 677, 760, 762, 909, 986, 1113, 1147
BshFI GGCC 7 cut(s) 356, 449, 741, 1198, 1248, 1388, 1409
BshNI GGYRCC 4 cut(s) 648, 694, 1216, 1348
BsiHKCI CYCGRG 2 cut(s) 1103, 1157
BsiSI CCGG 8 cut(s) 39, 122, 294, 341, 422, 837, 1083, 1416
BsmAI GTCTC 1 cut(s) 1113
BsmI GAATGC 1 cut(s) 565
BsnI GGCC 7 cut(s) 356, 449, 741, 1198, 1248, 1388, 1409
BsoBI CYCGRG 2 cut(s) 1103, 1157
Bsp120I GGGCCC 1 cut(s) 1196
Bsp1286I GDGCHC 4 cut(s) 877, 1182, 1200, 1233
Bsp143I GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
Bsp1720I GCTNAGC 3 cut(s) 56, 980, 1022
Bsp19I CCATGG 1 cut(s) 927
BspANI GGCC 7 cut(s) 356, 449, 741, 1198, 1248, 1388, 1409
BspCNI CTCAG 3 cut(s) 69, 1014, 1294
BspFNI CGCG 9 cut(s) 180, 237, 677, 760, 762, 909, 986, 1113, 1147
BspMAI CTGCAG 2 cut(s) 1101, 1296
BspMI ACCTGC 1 cut(s) 226
BspOI GCTAGC 2 cut(s) 9, 251
BspPI GGATC 7 cut(s) 794, 948, 998, 1256, 1354, 1367, 1482
BspT107I GGYRCC 4 cut(s) 648, 694, 1216, 1348
BsrBI CCGCTC 1 cut(s) 737
BsrDI GCAATG 2 cut(s) 116, 1239
BsrFI RCCGGY 5 cut(s) 293, 340, 421, 836, 1082
BsrI ACTGG 2 cut(s) 357, 639
BssAI RCCGGY 5 cut(s) 293, 340, 421, 836, 1082
BssECI CCNNGG 8 cut(s) 460, 606, 652, 927, 996, 1167, 1268, 1416
BssMI GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
BssNI GRCGYC 3 cut(s) 187, 649, 695
BssSI CACGAG 2 cut(s) 443, 870
BssT1I CCWWGG 2 cut(s) 927, 1167
Bst2BI CACGAG 2 cut(s) 443, 870
Bst2UI CCWGG 4 cut(s) 461, 653, 891, 1250
Bst4CI ACNGT 6 cut(s) 386, 607, 669, 997, 1093, 1405
Bst6I CTCTTC 5 cut(s) 297, 342, 386, 1367, 1499
BstACI GRCGYC 3 cut(s) 187, 649, 695
BstDEI CTNAG 4 cut(s) 56, 980, 1022, 1281
BstDSI CCRYGG 3 cut(s) 606, 927, 996
BstEII GGTNACC 1 cut(s) 1273
BstF5I GGATG 1 cut(s) 78
BstFNI CGCG 9 cut(s) 180, 237, 677, 760, 762, 909, 986, 1113, 1147
BstH2I RGCGCY 3 cut(s) 652, 698, 1022
BstKTI GATC 7 cut(s) 789, 823, 943, 1006, 1264, 1362, 1477
BstMAI GTCTC 1 cut(s) 1113
BstMBI GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
BstMWI GCNNNNNNNGC 6 cut(s) 127, 751, 766, 1151, 1385, 1390
BstNI CCWGG 4 cut(s) 461, 653, 891, 1250
BstNSI RCATGY 1 cut(s) 967
BstPI GGTNACC 1 cut(s) 1273
BstSCI CCNGG 6 cut(s) 38, 459, 651, 889, 1248, 1415
BstSFI CTRYAG 2 cut(s) 1097, 1292
BstSLI GKGCMC 3 cut(s) 877, 1182, 1200
BstUI CGCG 9 cut(s) 180, 237, 677, 760, 762, 909, 986, 1113, 1147
BstV1I GCAGC 7 cut(s) 578, 606, 983, 1066, 1111, 1114, 1463
BstX2I RGATCY 4 cut(s) 820, 940, 1359, 1474
BstXI CCANNNNNNTGG 1 cut(s) 928
BstYI RGATCY 4 cut(s) 820, 940, 1359, 1474
BsuRI GGCC 7 cut(s) 356, 449, 741, 1198, 1248, 1388, 1409
BtgI CCRYGG 3 cut(s) 606, 927, 996
BtrI CACGTC 1 cut(s) 49
BtsCI GGATG 1 cut(s) 78
BtsI GCAGTG 2 cut(s) 34, 776
BtsIMutI CAGTG 2 cut(s) 34, 776
BveI ACCTGC 1 cut(s) 226
CaiI CAGNNNCTG 2 cut(s) 619, 1021
Cfr10I RCCGGY 5 cut(s) 293, 340, 421, 836, 1082
Cfr13I GGNCC 6 cut(s) 739, 931, 1196, 1197, 1246, 1286
CseI GACGC 6 cut(s) 80, 176, 360, 683, 766, 920
Csp6I GTAC 2 cut(s) 336, 430
CspCI CAANNNNNGTGG 2 cut(s) 1174, 1209
CviAII CATG 5 cut(s) 643, 928, 935, 964, 1259
CviQI GTAC 2 cut(s) 336, 430
DdeI CTNAG 4 cut(s) 56, 980, 1022, 1281
DinI GGCGCC 2 cut(s) 650, 696
DpnI GATC 7 cut(s) 788, 822, 942, 1005, 1263, 1361, 1476
DpnII GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
EaeI YGGCCR 2 cut(s) 354, 1407
Eam1104I CTCTTC 5 cut(s) 297, 342, 386, 1367, 1499
EarI CTCTTC 5 cut(s) 297, 342, 386, 1367, 1499
EciI GGCGGA 3 cut(s) 446, 1254, 1352
Eco130I CCWWGG 2 cut(s) 927, 1167
Eco147I AGGCCT 1 cut(s) 1388
Eco24I GRGCYC 2 cut(s) 1200, 1233
Eco47I GGWCC 2 cut(s) 931, 1286
Eco57I CTGAAG 1 cut(s) 410
Eco88I CYCGRG 2 cut(s) 1103, 1157
Eco91I GGTNACC 1 cut(s) 1273
EcoO109I RGGNCCY 2 cut(s) 1197, 1286
EcoO65I GGTNACC 1 cut(s) 1273
EcoRI GAATTC 1 cut(s) 1487
EcoRII CCWGG 4 cut(s) 459, 651, 889, 1248
EcoT14I CCWWGG 2 cut(s) 927, 1167
EcoT38I GRGCYC 2 cut(s) 1200, 1233
EgeI GGCGCC 2 cut(s) 650, 696
EheI GGCGCC 2 cut(s) 650, 696
ErhI CCWWGG 2 cut(s) 927, 1167
FaeI CATG 5 cut(s) 646, 931, 938, 967, 1262
FatI CATG 5 cut(s) 642, 927, 934, 963, 1258
FauI CCCGC 4 cut(s) 670, 730, 1127, 1237
FokI GGATG 1 cut(s) 85
FriOI GRGCYC 2 cut(s) 1200, 1233
FspBI CTAG 6 cut(s) 6, 131, 248, 267, 818, 1439
GsaI CCCAGC 2 cut(s) 844, 978
GsuI CTGGAG 2 cut(s) 476, 1271
HaeII RGCGCY 3 cut(s) 652, 698, 1022
HaeIII GGCC 7 cut(s) 356, 449, 741, 1198, 1248, 1388, 1409
HapII CCGG 8 cut(s) 39, 122, 294, 341, 422, 837, 1083, 1416
HgaI GACGC 6 cut(s) 80, 176, 360, 683, 766, 920
Hin1I GRCGYC 3 cut(s) 187, 649, 695
Hin1II CATG 5 cut(s) 646, 931, 938, 967, 1262
HincII GTYRAC 2 cut(s) 382, 834
HindII GTYRAC 2 cut(s) 382, 834
HinfI GANTC 9 cut(s) 35, 83, 272, 868, 881, 1106, 1138, 1343, 1442
HpaII CCGG 8 cut(s) 39, 122, 294, 341, 422, 837, 1083, 1416
HphI GGTGA 4 cut(s) 311, 1057, 1267, 1411
Hpy166II GTNNAC 5 cut(s) 382, 400, 442, 640, 834
Hpy188III TCNNGA 6 cut(s) 329, 443, 493, 1157, 1468, 1478
Hpy8I GTNNAC 5 cut(s) 382, 400, 442, 640, 834
Hpy99I CGWCG 7 cut(s) 205, 376, 914, 1225, 1325, 1415, 1432
HpyAV CCTTC 7 cut(s) 168, 400, 590, 1219, 1319, 1327, 1390
HpyCH4III ACNGT 6 cut(s) 386, 607, 669, 997, 1093, 1405
HpyCH4IV ACGT 1 cut(s) 48
HpyCH4V TGCA 6 cut(s) 622, 946, 971, 1099, 1294, 1451
HpyF10VI GCNNNNNNNGC 6 cut(s) 127, 751, 766, 1151, 1385, 1390
HpyF3I CTNAG 4 cut(s) 56, 980, 1022, 1281
HpySE526I ACGT 1 cut(s) 48
Hsp92I GRCGYC 3 cut(s) 187, 649, 695
Hsp92II CATG 5 cut(s) 646, 931, 938, 967, 1262
KasI GGCGCC 2 cut(s) 648, 694
Kzo9I GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
LmnI GCTCC 5 cut(s) 766, 844, 1159, 1228, 1252
Lsp1109I GCAGC 7 cut(s) 578, 606, 983, 1066, 1111, 1114, 1463
LweI GCATC 2 cut(s) 280, 1044
MaeI CTAG 6 cut(s) 6, 131, 248, 267, 818, 1439
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 4 cut(s) 466, 893, 1273, 1399
MalI GATC 7 cut(s) 788, 822, 942, 1005, 1263, 1361, 1476
MbiI CCGCTC 1 cut(s) 737
MboI GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
MfeI CAATTG 1 cut(s) 1353
MflI RGATCY 4 cut(s) 820, 940, 1359, 1474
MhlI GDGCHC 4 cut(s) 877, 1182, 1200, 1233
MluCI AATT 5 cut(s) 414, 531, 863, 1353, 1487
Mly113I GGCGCC 2 cut(s) 649, 695
MlyI GAGTC 6 cut(s) 77, 862, 1115, 1147, 1337, 1436
MmeI TCCRAC 2 cut(s) 696, 748
MseI TTAA 1 cut(s) 711
MspA1I CMGCKG 4 cut(s) 60, 278, 974, 1079
MspI CCGG 8 cut(s) 39, 122, 294, 341, 422, 837, 1083, 1416
MspR9I CCNGG 6 cut(s) 40, 461, 653, 891, 1250, 1417
MunI CAATTG 1 cut(s) 1353
Mva1269I GAATGC 1 cut(s) 565
MvaI CCWGG 4 cut(s) 461, 653, 891, 1250
MvnI CGCG 9 cut(s) 180, 237, 677, 760, 762, 909, 986, 1113, 1147
MwoI GCNNNNNNNGC 6 cut(s) 127, 751, 766, 1151, 1385, 1390
NarI GGCGCC 2 cut(s) 649, 695
NciI CCSGG 2 cut(s) 40, 1417
NcoI CCATGG 1 cut(s) 927
NdeII GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
NheI GCTAGC 2 cut(s) 5, 247
NlaIII CATG 5 cut(s) 646, 931, 938, 967, 1262
NmeAIII GCCGAG 2 cut(s) 1141, 1293
NmuCI GTSAC 2 cut(s) 1273, 1399
NspI RCATGY 1 cut(s) 967
PaeR7I CTCGAG 1 cut(s) 1103
PceI AGGCCT 1 cut(s) 1388
PcsI WCGNNNNNNNCGW 2 cut(s) 184, 1117
PctI GAATGC 1 cut(s) 565
PfeI GAWTC 3 cut(s) 35, 272, 881
PflFI GACNNNGTC 2 cut(s) 370, 1319
PflMI CCANNNNNTGG 1 cut(s) 262
PleI GAGTC 6 cut(s) 77, 862, 1114, 1146, 1337, 1436
PluTI GGCGCC 2 cut(s) 652, 698
PpsI GAGTC 6 cut(s) 77, 862, 1114, 1146, 1337, 1436
PpuMI RGGWCCY 1 cut(s) 1286
Psp5II RGGWCCY 1 cut(s) 1286
Psp6I CCWGG 4 cut(s) 459, 651, 889, 1248
PspEI GGTNACC 1 cut(s) 1273
PspFI CCCAGC 2 cut(s) 840, 974
PspGI CCWGG 4 cut(s) 459, 651, 889, 1248
PspOMI GGGCCC 1 cut(s) 1196
PspPI GGNCC 6 cut(s) 739, 931, 1196, 1197, 1246, 1286
PspPPI RGGWCCY 1 cut(s) 1286
PspXI VCTCGAGB 1 cut(s) 1103
PstI CTGCAG 2 cut(s) 1101, 1296
PstNI CAGNNNCTG 2 cut(s) 619, 1021
PsuI RGATCY 4 cut(s) 820, 940, 1359, 1474
PsyI GACNNNGTC 2 cut(s) 370, 1319
PvuII CAGCTG 1 cut(s) 974
RsaI GTAC 2 cut(s) 337, 431
RsaNI GTAC 2 cut(s) 336, 430
SaqAI TTAA 1 cut(s) 711
Sau3AI GATC 7 cut(s) 786, 820, 940, 1003, 1261, 1359, 1474
Sau96I GGNCC 6 cut(s) 739, 931, 1196, 1197, 1246, 1286
SchI GAGTC 6 cut(s) 77, 862, 1115, 1147, 1337, 1436
ScrFI CCNGG 6 cut(s) 40, 461, 653, 891, 1250, 1417
SduI GDGCHC 4 cut(s) 877, 1182, 1200, 1233
SfaNI GCATC 2 cut(s) 280, 1044
SfcI CTRYAG 2 cut(s) 1097, 1292
SfoI GGCGCC 2 cut(s) 650, 696
Sfr274I CTCGAG 1 cut(s) 1103
SinI GGWCC 2 cut(s) 931, 1286
SlaI CTCGAG 1 cut(s) 1103
SmlI CTYRAG 2 cut(s) 1103, 1478
SmoI CTYRAG 2 cut(s) 1103, 1478
Sse9I AATT 5 cut(s) 414, 531, 863, 1353, 1487
SseBI AGGCCT 1 cut(s) 1388
SspDI GGCGCC 2 cut(s) 648, 694
SspMI CTAG 6 cut(s) 6, 131, 248, 267, 818, 1439
StuI AGGCCT 1 cut(s) 1388
StyD4I CCNGG 6 cut(s) 38, 459, 651, 889, 1248, 1415
StyI CCWWGG 2 cut(s) 927, 1167
TaaI ACNGT 6 cut(s) 386, 607, 669, 997, 1093, 1405
TaiI ACGT 1 cut(s) 51
TaqI TCGA 7 cut(s) 23, 200, 513, 855, 1052, 1104, 1323
TasI AATT 5 cut(s) 414, 531, 863, 1353, 1487
TfiI GAWTC 3 cut(s) 35, 272, 881
Tru1I TTAA 1 cut(s) 711
Tru9I TTAA 1 cut(s) 711
TscAI CASTG 2 cut(s) 34, 776
TseFI GTSAC 2 cut(s) 1273, 1399
TseI GCWGC 7 cut(s) 591, 619, 971, 1079, 1099, 1127, 1451
Tsp45I GTSAC 2 cut(s) 1273, 1399
TspGWI ACGGA 3 cut(s) 815, 874, 1487
TspRI CASTG 2 cut(s) 34, 776
Tth111I GACNNNGTC 2 cut(s) 370, 1319
Van91I CCANNNNNTGG 1 cut(s) 262
VpaK11BI GGWCC 2 cut(s) 931, 1286
XapI RAATTY 2 cut(s) 531, 1487
XceI RCATGY 1 cut(s) 967
XcmI CCANNNNNNNNNTGG 1 cut(s) 1246
XhoI CTCGAG 1 cut(s) 1103
XspI CTAG 6 cut(s) 6, 131, 248, 267, 818, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.