pycom15g20360

Alpha and gamma adaptin binding protein p34

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
14536959 .. 14539162
2204 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g20360.5

Sequence Viewer

Length: 1278 bp
ATGGAAGCTCAAGCAAAAGAAGGAGACTCTCTGGAGAAGCGGCCCGGCATCTTCTTCCTTGGTTCCCCCGGCGTCGGCAAACGCTCTCTTATTTCTCGATTACTGGTTTTGGATTTTGACGACGCTTCTGATTCGTCATCGTCGTCATCTCAGCTGGTGGTTAATGGATGGAATATCTCTACAAAGTACTATGCTGCTGATGTTTCGGTATGGATGGCTCATCTCCATGACGAATTTTCGATTGAGACCCTCCCAATGTATGACCAGTTGGCTGCCTTGATCTTGGTTTTCGACACAACTGAGTTGACGTCTCTGTCTGCACTTCAGAAATGGGTGTCCCGAACTGATCTTCAAAAGTTCGATATACTAGTATGTGTAGGGAATAAGGTTGATCTTGTTCCGGGTCACCCAGTTCATGCTGTATATAGAAGACAATTGCAGAAGCTTGGAGACCCGTTTGCTGATGACGGTCCGGCTTTCACTGTGTATGGAATCTCCGAGGCTGAAGGAAGCAGTTTATTGGGGGATGACGAGCCACCTTGGGAGGCTAGGCACACATGTTTGGAATGGTGCACTGAGCATAACATTGAGTTCATCGAAGCTTGTGCTTCAAATGCTGATTTTGACAAATGTTTGTCAGTTGATGGCGATTCACAAGGTATTGAACGGCTTTTTGGTGCTCTTTCTGCACACATGTGGCCTGGAATGATTTTGAAATCAGGCGATAAGATTGCTGATCCATCACTACCTGAAAGAGGAGAAGACTTGTCAGACGAAGAATCTGATTATGAATTTGAGTATGAAGTCCTCTCTGCGGGTTCAGCTGACCCATTTGATGACACGGAAGAATGGGTTTCTGCAAATGGTTTTGCTGGACCTTCAGATATACGAGGACTGGCTGCTCAAAGTAATCTTGTCCTAAAATGCAAAGAAGAGAATGGAACCAGCTGTGGTAAGCAGGAGTCCCATGCCTCAACCTCGACAGCTGCGTTGGATGATGGTATCAACAAAGGAGGGGTATCCAATGCAGAAAAACCTGACCAAGACACAAAACCTGACCAAGACACATTACTTGACCAAGCCCAAGAACCAGATGAGGGTTCGAATGTTGAATTTGAGGATTTGGAACAGTTGATGTCTGAGATTGGGAACATGCGTGACAGTTTGAGATTGATGCCCGATTTTCAGAGACGAGATATGGCTGCAAAGCTGGCCATGAAAATGGCTACGATGTTCGGGGGCGGCAGTGATGATGAAGTGGAAAGTATCGGCGAGTAA

Protein Analysis

426

Amino Acids

46.41

Weight (kDa)

4.26

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 313
AatII GACGTC 1 cut(s) 311
AciI CCGC 3 cut(s) 40, 815, 1242
AclWI GGATC 1 cut(s) 731
AcoI YGGCCR 1 cut(s) 1212
AcsI RAATTY 3 cut(s) 233, 791, 1112
AcuI CTGAAG 3 cut(s) 308, 525, 864
AcyI GRCGYC 2 cut(s) 72, 308
AfaI GTAC 1 cut(s) 188
AfiI CCNNNNNNNGG 4 cut(s) 74, 755, 814, 1097
AflIII ACRYGT 2 cut(s) 557, 693
AgsI TTSAA 5 cut(s) 353, 612, 665, 715, 1112
AhlI ACTAGT 1 cut(s) 367
AjnI CCWGG 1 cut(s) 700
AjuI GAANNNNNNNTTGG 2 cut(s) 657, 689
AleI CACNNNNGTG 1 cut(s) 694
AluBI AGCT 8 cut(s) 8, 154, 445, 602, 824, 948, 986, 1210
AluI AGCT 8 cut(s) 8, 154, 445, 602, 824, 948, 986, 1210
Alw21I GWGCWC 2 cut(s) 575, 682
Alw26I GTCTC 5 cut(s) 18, 239, 315, 444, 1183
Alw44I GTGCAC 1 cut(s) 571
AlwI GGATC 1 cut(s) 731
AoxI GGCC 3 cut(s) 41, 698, 1212
ApaLI GTGCAC 1 cut(s) 571
ApeKI GCWGC 5 cut(s) 194, 272, 899, 986, 1202
ApoI RAATTY 3 cut(s) 233, 791, 1112
AspS9I GGNCC 3 cut(s) 42, 470, 875
AsuC2I CCSGG 3 cut(s) 45, 69, 402
AsuHPI GGTGA 1 cut(s) 398
AsuII TTCGAA 1 cut(s) 1103
AvaII GGWCC 2 cut(s) 470, 875
BaeGI GKGCMC 1 cut(s) 575
BalI TGGCCA 1 cut(s) 1214
BbsI GAAGAC 2 cut(s) 436, 768
Bbv12I GWGCWC 2 cut(s) 575, 682
BbvI GCAGC 5 cut(s) 181, 259, 886, 973, 1189
BccI CCATC 5 cut(s) 162, 208, 638, 748, 992
BceAI ACGGC 1 cut(s) 683
BcgI CGANNNNNNTGC 4 cut(s) 587, 621, 713, 747
BciT130I CCWGG 1 cut(s) 702
BciVI GTATCC 1 cut(s) 1030
BcnI CCSGG 3 cut(s) 45, 69, 402
BcoDI GTCTC 5 cut(s) 18, 239, 315, 444, 1183
BcuI ACTAGT 1 cut(s) 367
BfaI CTAG 2 cut(s) 368, 549
BfuI GTATCC 1 cut(s) 1030
BisI GCNGC 7 cut(s) 41, 195, 273, 900, 987, 1203, 1243
BlsI GCNGC 7 cut(s) 42, 196, 274, 901, 988, 1204, 1244
BmcAI AGTACT 1 cut(s) 188
Bme1390I CCNGG 4 cut(s) 45, 69, 402, 702
Bme18I GGWCC 2 cut(s) 470, 875
BmgT120I GGNCC 3 cut(s) 42, 470, 875
BmiI GGNNCC 2 cut(s) 64, 943
BmrFI CCNGG 4 cut(s) 45, 69, 402, 702
BmrI ACTGGG 1 cut(s) 404
BmsI GCATC 2 cut(s) 57, 1164
BmuI ACTGGG 1 cut(s) 404
BpiI GAAGAC 2 cut(s) 436, 768
BpmI CTGGAG 1 cut(s) 53
Bpu14I TTCGAA 1 cut(s) 1103
BpuMI CCSGG 3 cut(s) 45, 69, 402
BsaHI GRCGYC 2 cut(s) 72, 308
BsaI GGTCTC 2 cut(s) 239, 444
BsaJI CCNNGG 4 cut(s) 58, 67, 498, 539
Bsc4I CCNNNNNNNGG 4 cut(s) 74, 755, 814, 1097
Bse1I ACTGG 4 cut(s) 108, 265, 410, 900
BseBI CCWGG 1 cut(s) 702
BseDI CCNNGG 4 cut(s) 58, 67, 498, 539
BseGI GGATG 4 cut(s) 173, 219, 532, 1000
BseLI CCNNNNNNNGG 4 cut(s) 74, 755, 814, 1097
BseMII CTCAG 4 cut(s) 164, 291, 567, 1131
BseNI ACTGG 4 cut(s) 108, 265, 410, 900
BseRI GAGGAG 1 cut(s) 771
BseSI GKGCMC 1 cut(s) 575
BseXI GCAGC 5 cut(s) 181, 259, 886, 973, 1189
BsgI GTGCAG 2 cut(s) 303, 672
BshFI GGCC 3 cut(s) 43, 700, 1214
BsiHKAI GWGCWC 2 cut(s) 575, 682
BsiSI CCGG 4 cut(s) 45, 69, 401, 473
BslFI GGGAC 2 cut(s) 322, 949
BslI CCNNNNNNNGG 4 cut(s) 74, 755, 814, 1097
BsmAI GTCTC 5 cut(s) 18, 239, 315, 444, 1183
BsmBI CGTCTC 2 cut(s) 315, 1183
BsmFI GGGAC 2 cut(s) 322, 949
BsnI GGCC 3 cut(s) 43, 700, 1214
Bso31I GGTCTC 2 cut(s) 239, 444
Bsp119I TTCGAA 1 cut(s) 1103
Bsp1286I GDGCHC 2 cut(s) 575, 682
Bsp143I GATC 4 cut(s) 279, 346, 391, 736
BspACI CCGC 3 cut(s) 40, 815, 1242
BspANI GGCC 3 cut(s) 43, 700, 1214
BspCNI CTCAG 4 cut(s) 163, 292, 568, 1132
BspLI GGNNCC 2 cut(s) 64, 943
BspPI GGATC 1 cut(s) 731
BspT104I TTCGAA 1 cut(s) 1103
BspTNI GGTCTC 2 cut(s) 239, 444
BsrI ACTGG 4 cut(s) 108, 265, 410, 900
BssECI CCNNGG 4 cut(s) 58, 67, 498, 539
BssMI GATC 4 cut(s) 279, 346, 391, 736
BssNI GRCGYC 2 cut(s) 72, 308
BssT1I CCWWGG 2 cut(s) 58, 539
Bst2UI CCWGG 1 cut(s) 702
Bst4CI ACNGT 4 cut(s) 470, 484, 1131, 1163
Bst6I CTCTTC 1 cut(s) 927
BstACI GRCGYC 2 cut(s) 72, 308
BstBI TTCGAA 1 cut(s) 1103
BstC8I GCNNGC 1 cut(s) 1212
BstDEI CTNAG 4 cut(s) 150, 300, 576, 1140
BstEII GGTNACC 1 cut(s) 404
BstENI CCTNNNNNAGG 1 cut(s) 753
BstF5I GGATG 4 cut(s) 173, 219, 532, 1000
BstKTI GATC 4 cut(s) 282, 349, 394, 739
BstMAI GTCTC 5 cut(s) 18, 239, 315, 444, 1183
BstMBI GATC 4 cut(s) 279, 346, 391, 736
BstMWI GCNNNNNNNGC 4 cut(s) 614, 686, 821, 1211
BstNI CCWGG 1 cut(s) 702
BstNSI RCATGY 3 cut(s) 561, 697, 1156
BstPI GGTNACC 1 cut(s) 404
BstSCI CCNGG 4 cut(s) 43, 67, 400, 700
BstSLI GKGCMC 1 cut(s) 575
BstV1I GCAGC 5 cut(s) 181, 259, 886, 973, 1189
BstV2I GAAGAC 2 cut(s) 436, 768
BstXI CCANNNNNNTGG 1 cut(s) 1222
BsuI GTATCC 1 cut(s) 1030
BsuRI GGCC 3 cut(s) 43, 700, 1214
BtsCI GGATG 4 cut(s) 173, 219, 532, 1000
BtsI GCAGTG 1 cut(s) 1252
BtsIMutI CAGTG 3 cut(s) 480, 573, 1252
Cac8I GCNNGC 1 cut(s) 1212
Cfr13I GGNCC 3 cut(s) 42, 470, 875
CpoI CGGWCCG 1 cut(s) 470
CseI GACGC 2 cut(s) 61, 131
Csp6I GTAC 1 cut(s) 187
CspI CGGWCCG 1 cut(s) 470
CviAII CATG 7 cut(s) 227, 416, 558, 694, 968, 1153, 1216
CviQI GTAC 1 cut(s) 187
DdeI CTNAG 4 cut(s) 150, 300, 576, 1140
DpnI GATC 4 cut(s) 281, 348, 393, 738
DpnII GATC 4 cut(s) 279, 346, 391, 736
DrdI GACNNNNNNGTC 1 cut(s) 313
DseDI GACNNNNNNGTC 1 cut(s) 313
EaeI YGGCCR 1 cut(s) 1212
Eam1104I CTCTTC 1 cut(s) 927
EarI CTCTTC 1 cut(s) 927
Eco130I CCWWGG 2 cut(s) 58, 539
Eco31I GGTCTC 2 cut(s) 239, 444
Eco47I GGWCC 2 cut(s) 470, 875
Eco57I CTGAAG 3 cut(s) 308, 525, 864
Eco91I GGTNACC 1 cut(s) 404
EcoNI CCTNNNNNAGG 1 cut(s) 753
EcoO65I GGTNACC 1 cut(s) 404
EcoRII CCWGG 1 cut(s) 700
EcoT14I CCWWGG 2 cut(s) 58, 539
ErhI CCWWGG 2 cut(s) 58, 539
Esp3I CGTCTC 2 cut(s) 315, 1183
FaeI CATG 7 cut(s) 230, 419, 561, 697, 971, 1156, 1219
FaqI GGGAC 2 cut(s) 322, 949
FatI CATG 7 cut(s) 226, 415, 557, 693, 967, 1152, 1215
FauI CCCGC 1 cut(s) 808
Fnu4HI GCNGC 7 cut(s) 41, 195, 273, 900, 987, 1203, 1243
FokI GGATG 4 cut(s) 180, 226, 539, 1007
Fsp4HI GCNGC 7 cut(s) 41, 195, 273, 900, 987, 1203, 1243
FspBI CTAG 2 cut(s) 368, 549
GluI GCNGC 7 cut(s) 41, 195, 273, 900, 987, 1203, 1243
GsuI CTGGAG 1 cut(s) 53
HaeIII GGCC 3 cut(s) 43, 700, 1214
HapII CCGG 4 cut(s) 45, 69, 401, 473
HgaI GACGC 2 cut(s) 61, 131
Hin1I GRCGYC 2 cut(s) 72, 308
Hin1II CATG 7 cut(s) 230, 419, 561, 697, 971, 1156, 1219
HincII GTYRAC 1 cut(s) 306
HindII GTYRAC 1 cut(s) 306
HindIII AAGCTT 2 cut(s) 443, 600
HinfI GANTC 6 cut(s) 26, 131, 492, 650, 779, 962
HpaII CCGG 4 cut(s) 45, 69, 401, 473
HphI GGTGA 1 cut(s) 398
Hpy166II GTNNAC 2 cut(s) 306, 573
Hpy188I TCNGA 8 cut(s) 130, 327, 499, 772, 784, 883, 1141, 1188
Hpy188III TCNNGA 3 cut(s) 32, 96, 339
Hpy8I GTNNAC 2 cut(s) 306, 573
Hpy99I CGWCG 3 cut(s) 77, 125, 145
HpyAV CCTTC 3 cut(s) 14, 500, 888
HpyCH4III ACNGT 4 cut(s) 470, 484, 1131, 1163
HpyCH4IV ACGT 1 cut(s) 308
HpyCH4V TGCA 8 cut(s) 320, 439, 573, 689, 860, 927, 1028, 1205
HpyF10VI GCNNNNNNNGC 4 cut(s) 614, 686, 821, 1211
HpyF3I CTNAG 4 cut(s) 150, 300, 576, 1140
HpySE526I ACGT 1 cut(s) 308
Hsp92I GRCGYC 2 cut(s) 72, 308
Hsp92II CATG 7 cut(s) 230, 419, 561, 697, 971, 1156, 1219
Kzo9I GATC 4 cut(s) 279, 346, 391, 736
Lsp1109I GCAGC 5 cut(s) 181, 259, 886, 973, 1189
LweI GCATC 2 cut(s) 57, 1164
MaeI CTAG 2 cut(s) 368, 549
MaeII ACGT 1 cut(s) 308
MaeIII GTNAC 2 cut(s) 404, 1157
MalI GATC 4 cut(s) 281, 348, 393, 738
MboI GATC 4 cut(s) 279, 346, 391, 736
MboII GAAGA 8 cut(s) 43, 46, 341, 441, 773, 788, 857, 944
MfeI CAATTG 1 cut(s) 434
MhlI GDGCHC 2 cut(s) 575, 682
MlsI TGGCCA 1 cut(s) 1214
MluCI AATT 4 cut(s) 233, 434, 791, 1112
MluNI TGGCCA 1 cut(s) 1214
MlyI GAGTC 2 cut(s) 20, 971
MmeI TCCRAC 1 cut(s) 972
Mox20I TGGCCA 1 cut(s) 1214
MscI TGGCCA 1 cut(s) 1214
MseI TTAA 1 cut(s) 162
MslI CAYNNNNRTG 3 cut(s) 225, 694, 1220
Msp20I TGGCCA 1 cut(s) 1214
MspA1I CMGCKG 4 cut(s) 154, 824, 948, 986
MspI CCGG 4 cut(s) 45, 69, 401, 473
MspR9I CCNGG 4 cut(s) 45, 69, 402, 702
MunI CAATTG 1 cut(s) 434
MvaI CCWGG 1 cut(s) 702
MwoI GCNNNNNNNGC 4 cut(s) 614, 686, 821, 1211
NciI CCSGG 3 cut(s) 45, 69, 402
NdeII GATC 4 cut(s) 279, 346, 391, 736
NlaIII CATG 7 cut(s) 230, 419, 561, 697, 971, 1156, 1219
NlaIV GGNNCC 2 cut(s) 64, 943
NmuCI GTSAC 2 cut(s) 404, 1157
NspI RCATGY 3 cut(s) 561, 697, 1156
NspV TTCGAA 1 cut(s) 1103
OliI CACNNNNGTG 1 cut(s) 694
PciI ACATGT 2 cut(s) 557, 693
PcsI WCGNNNNNNNCGW 2 cut(s) 140, 986
PfeI GAWTC 4 cut(s) 131, 492, 650, 779
PkrI GCNGC 7 cut(s) 42, 196, 274, 901, 988, 1204, 1244
PleI GAGTC 2 cut(s) 20, 970
PpsI GAGTC 2 cut(s) 20, 970
PscI ACATGT 2 cut(s) 557, 693
Psp6I CCWGG 1 cut(s) 700
PspEI GGTNACC 1 cut(s) 404
PspGI CCWGG 1 cut(s) 700
PspN4I GGNNCC 2 cut(s) 64, 943
PspPI GGNCC 3 cut(s) 42, 470, 875
PvuII CAGCTG 4 cut(s) 154, 824, 948, 986
RsaI GTAC 1 cut(s) 188
RsaNI GTAC 1 cut(s) 187
RseI CAYNNNNRTG 3 cut(s) 225, 694, 1220
Rsr2I CGGWCCG 1 cut(s) 470
RsrII CGGWCCG 1 cut(s) 470
SaqAI TTAA 1 cut(s) 162
SatI GCNGC 7 cut(s) 41, 195, 273, 900, 987, 1203, 1243
Sau3AI GATC 4 cut(s) 279, 346, 391, 736
Sau96I GGNCC 3 cut(s) 42, 470, 875
ScaI AGTACT 1 cut(s) 188
SchI GAGTC 2 cut(s) 20, 971
ScrFI CCNGG 4 cut(s) 45, 69, 402, 702
SduI GDGCHC 2 cut(s) 575, 682
SfaNI GCATC 2 cut(s) 57, 1164
SfuI TTCGAA 1 cut(s) 1103
SinI GGWCC 2 cut(s) 470, 875
SmiMI CAYNNNNRTG 3 cut(s) 225, 694, 1220
SmlI CTYRAG 1 cut(s) 9
SmoI CTYRAG 1 cut(s) 9
SpeI ACTAGT 1 cut(s) 367
Sse9I AATT 4 cut(s) 233, 434, 791, 1112
SsiI CCGC 3 cut(s) 40, 815, 1242
SspMI CTAG 2 cut(s) 368, 549
StyD4I CCNGG 4 cut(s) 43, 67, 400, 700
StyI CCWWGG 2 cut(s) 58, 539
TaaI ACNGT 4 cut(s) 470, 484, 1131, 1163
TaiI ACGT 1 cut(s) 311
TaqI TCGA 7 cut(s) 97, 239, 291, 360, 597, 980, 1103
TasI AATT 4 cut(s) 233, 434, 791, 1112
TatI WGTACW 1 cut(s) 186
TauI GCSGC 2 cut(s) 43, 1245
TfiI GAWTC 4 cut(s) 131, 492, 650, 779
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
TscAI CASTG 3 cut(s) 487, 580, 1252
TseFI GTSAC 2 cut(s) 404, 1157
TseI GCWGC 5 cut(s) 194, 272, 899, 986, 1202
Tsp45I GTSAC 2 cut(s) 404, 1157
TspDTI ATGAA 6 cut(s) 404, 583, 804, 816, 1232, 1269
TspGWI ACGGA 1 cut(s) 857
TspRI CASTG 3 cut(s) 487, 580, 1252
VneI GTGCAC 1 cut(s) 571
VpaK11BI GGWCC 2 cut(s) 470, 875
XagI CCTNNNNNAGG 1 cut(s) 753
XapI RAATTY 3 cut(s) 233, 791, 1112
XceI RCATGY 3 cut(s) 561, 697, 1156
XspI CTAG 2 cut(s) 368, 549
ZraI GACGTC 1 cut(s) 309
ZrmI AGTACT 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.