Prupe.7G232900_v2.0.a1

Protein of unknown function (DUF502)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
20339977 .. 20343840
3864 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G232900.1

Sequence Viewer

Length: 795 bp
ATGGGCGATGAGAAATCGTCGTCGTCGACTATAATGGCGAGCAGAGACAGAGAACCGCGAGATCGTGAGCTTCTCATTCCCGTGGCTGACTCCACCGATGAAGATGCTTCTTTCAAACCCTCTTCGTCTTCCTCTATTTCGCACCACACCGGCCGCGAGACATTTTCCAAAGTAGTTAGAAGTTGGGCATCAAAAAAGTTCATGACCGGATGTGTGATCCTGTTTCCGATAGCAATCACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATAGCTTCTTCTCCCCAATCTATGCTCAACTTGGAATCAACATTTTTGGTCTTGGATTTGTCACTTCCATTACTTTCATATTTATTGTTGGCGTGTTCATGTCATCATGGTTGGGTGCGTCTGTCCTGGGCCTTGGTGAGTGGTTCATCAAAAGAATGCCGTTTGTTCGTCATATCTACAATGCCTCCAAGCAGATTAGTTCCGCCATATCCCCAGATCAAAACACGCAAGCCTTCAAGGAAGTGGCCATCATAAGGCATCCACGCATTGGTGAATATGCATTTGGGTTCATAACTTCATCGGTCGTCCTTCAGAGCTATTCTGGAGATGAAGAGTTGTGCTGTGTTTATGTTCCCACGAACCATCTTTACATTGGCGATGTATTCTTGGTCAACACCAAGGATGTCATTAGACCAAATTTATCTGTACGGGAAGGAATTGAAATTGTTGTTTCTGGAGGCATGTCAATGCCCCAGATCCTGTCAACACTCGATAACCGGATTATGCCAATGGATAGCTGA

Protein Analysis

265

Amino Acids

29.54

Weight (kDa)

6.07

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 542
AccI GTMKAC 1 cut(s) 26
AccII CGCG 2 cut(s) 58, 156
AciI CCGC 3 cut(s) 56, 154, 477
AclWI GGATC 2 cut(s) 211, 745
AcoI YGGCCR 2 cut(s) 151, 519
AcsI RAATTY 1 cut(s) 691
AcuI CTGAAG 1 cut(s) 569
AdeI CACNNNGTG 1 cut(s) 271
AfaI GTAC 1 cut(s) 702
AfiI CCNNNNNNNGG 2 cut(s) 528, 542
AgsI TTSAA 3 cut(s) 115, 511, 716
AjnI CCWGG 1 cut(s) 399
AjuI GAANNNNNNNTTGG 2 cut(s) 540, 572
AluBI AGCT 4 cut(s) 70, 279, 591, 792
AluI AGCT 4 cut(s) 70, 279, 591, 792
Alw26I GTCTC 2 cut(s) 39, 152
AlwI GGATC 2 cut(s) 211, 745
AlwNI CAGNNNCTG 1 cut(s) 754
AoxI GGCC 3 cut(s) 151, 403, 519
ApoI RAATTY 1 cut(s) 691
AspS9I GGNCC 1 cut(s) 403
AsuHPI GGTGA 2 cut(s) 422, 557
BalI TGGCCA 1 cut(s) 521
BbsI GAAGAC 1 cut(s) 120
BccI CCATC 2 cut(s) 530, 645
BceAI ACGGC 1 cut(s) 418
BcgI CGANNNNNNTGC 2 cut(s) 86, 120
BciT130I CCWGG 1 cut(s) 401
BcoDI GTCTC 2 cut(s) 39, 152
BisI GCNGC 1 cut(s) 154
BlsI GCNGC 1 cut(s) 155
Bme1390I CCNGG 1 cut(s) 401
BmgT120I GGNCC 1 cut(s) 403
BmrFI CCNGG 1 cut(s) 401
BmsI GCATC 3 cut(s) 94, 197, 541
BpiI GAAGAC 1 cut(s) 120
BpmI CTGGAG 2 cut(s) 618, 750
BsaBI GATNNNNATC 1 cut(s) 233
BsaJI CCNNGG 4 cut(s) 81, 400, 406, 672
BsaWI WCCGGW 2 cut(s) 206, 771
BsaXI ACNNNNNCTCC 2 cut(s) 443, 473
Bsc4I CCNNNNNNNGG 2 cut(s) 528, 542
Bse118I RCCGGY 1 cut(s) 149
Bse8I GATNNNNATC 1 cut(s) 233
BseBI CCWGG 1 cut(s) 401
BseDI CCNNGG 4 cut(s) 81, 400, 406, 672
BseGI GGATG 3 cut(s) 215, 532, 682
BseJI GATNNNNATC 1 cut(s) 233
BseLI CCNNNNNNNGG 2 cut(s) 528, 542
BseX3I CGGCCG 1 cut(s) 151
Bsh1236I CGCG 2 cut(s) 58, 156
Bsh1285I CGRYCG 2 cut(s) 154, 579
BshFI GGCC 3 cut(s) 153, 405, 521
BsiEI CGRYCG 2 cut(s) 154, 579
BsiSI CCGG 3 cut(s) 150, 207, 772
BslI CCNNNNNNNGG 2 cut(s) 528, 542
BsmAI GTCTC 2 cut(s) 39, 152
BsmI GAATGC 1 cut(s) 435
BsnI GGCC 3 cut(s) 153, 405, 521
Bsp143I GATC 4 cut(s) 61, 216, 490, 750
BspACI CCGC 3 cut(s) 56, 154, 477
BspANI GGCC 3 cut(s) 153, 405, 521
BspFNI CGCG 2 cut(s) 58, 156
BspHI TCATGA 1 cut(s) 201
BspPI GGATC 2 cut(s) 211, 745
BsrFI RCCGGY 1 cut(s) 149
BssAI RCCGGY 1 cut(s) 149
BssECI CCNNGG 4 cut(s) 81, 400, 406, 672
BssMI GATC 4 cut(s) 61, 216, 490, 750
BssT1I CCWWGG 2 cut(s) 406, 672
Bst2UI CCWGG 1 cut(s) 401
Bst6I CTCTTC 2 cut(s) 127, 600
BstC8I GCNNGC 2 cut(s) 40, 504
BstDSI CCRYGG 1 cut(s) 81
BstF5I GGATG 3 cut(s) 215, 532, 682
BstFNI CGCG 2 cut(s) 58, 156
BstKTI GATC 4 cut(s) 64, 219, 493, 753
BstMAI GTCTC 2 cut(s) 39, 152
BstMBI GATC 4 cut(s) 61, 216, 490, 750
BstMCI CGRYCG 2 cut(s) 154, 579
BstNI CCWGG 1 cut(s) 401
BstNSI RCATGY 1 cut(s) 739
BstSCI CCNGG 1 cut(s) 399
BstUI CGCG 2 cut(s) 58, 156
BstV2I GAAGAC 1 cut(s) 120
BstX2I RGATCY 1 cut(s) 750
BstYI RGATCY 1 cut(s) 750
BstZI CGGCCG 1 cut(s) 151
BsuRI GGCC 3 cut(s) 153, 405, 521
BtgI CCRYGG 1 cut(s) 81
BtgZI GCGATG 2 cut(s) 21, 666
BtsCI GGATG 3 cut(s) 215, 532, 682
Cac8I GCNNGC 2 cut(s) 40, 504
CaiI CAGNNNCTG 1 cut(s) 754
CciI TCATGA 1 cut(s) 201
Cfr10I RCCGGY 1 cut(s) 149
Cfr13I GGNCC 1 cut(s) 403
CseI GACGC 1 cut(s) 381
Csp6I GTAC 1 cut(s) 701
CviAII CATG 4 cut(s) 202, 373, 381, 736
CviJI RGCY 9 cut(s) 70, 86, 153, 279, 405, 506, 521, 591, 792
CviKI_1 RGCY 9 cut(s) 70, 86, 153, 279, 405, 506, 521, 591, 792
CviQI GTAC 1 cut(s) 701
DpnI GATC 4 cut(s) 63, 218, 492, 752
DpnII GATC 4 cut(s) 61, 216, 490, 750
DraIII CACNNNGTG 1 cut(s) 271
EaeI YGGCCR 2 cut(s) 151, 519
EagI CGGCCG 1 cut(s) 151
Eam1104I CTCTTC 2 cut(s) 127, 600
EarI CTCTTC 2 cut(s) 127, 600
EciI GGCGGA 1 cut(s) 466
EclXI CGGCCG 1 cut(s) 151
Eco130I CCWWGG 2 cut(s) 406, 672
Eco52I CGGCCG 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 569
EcoRII CCWGG 1 cut(s) 399
EcoT14I CCWWGG 2 cut(s) 406, 672
EcoT22I ATGCAT 1 cut(s) 556
ErhI CCWWGG 2 cut(s) 406, 672
FaeI CATG 4 cut(s) 205, 376, 384, 739
FatI CATG 4 cut(s) 201, 372, 380, 735
FblI GTMKAC 1 cut(s) 26
Fnu4HI GCNGC 1 cut(s) 154
FokI GGATG 3 cut(s) 222, 519, 689
Fsp4HI GCNGC 1 cut(s) 154
GluI GCNGC 1 cut(s) 154
GsuI CTGGAG 2 cut(s) 618, 750
HaeIII GGCC 3 cut(s) 153, 405, 521
HapII CCGG 3 cut(s) 150, 207, 772
HgaI GACGC 1 cut(s) 381
Hin1II CATG 4 cut(s) 205, 376, 384, 739
HincII GTYRAC 3 cut(s) 27, 667, 759
HindII GTYRAC 3 cut(s) 27, 667, 759
HinfI GANTC 2 cut(s) 89, 309
HpaII CCGG 3 cut(s) 150, 207, 772
HphI GGTGA 2 cut(s) 422, 557
Hpy166II GTNNAC 3 cut(s) 27, 667, 759
Hpy188I TCNGA 2 cut(s) 228, 588
Hpy188III TCNNGA 4 cut(s) 65, 202, 597, 729
Hpy8I GTNNAC 3 cut(s) 27, 667, 759
Hpy99I CGWCG 3 cut(s) 22, 25, 28
HpyAV CCTTC 3 cut(s) 517, 593, 701
HpyCH4IV ACGT 1 cut(s) 251
HpyCH4V TGCA 1 cut(s) 554
HpySE526I ACGT 1 cut(s) 251
Hsp92II CATG 4 cut(s) 205, 376, 384, 739
Kzo9I GATC 4 cut(s) 61, 216, 490, 750
LweI GCATC 3 cut(s) 94, 197, 541
MaeII ACGT 1 cut(s) 251
MaeIII GTNAC 1 cut(s) 334
MalI GATC 4 cut(s) 63, 218, 492, 752
MboI GATC 4 cut(s) 61, 216, 490, 750
MboII GAAGA 5 cut(s) 113, 114, 120, 274, 617
MflI RGATCY 1 cut(s) 750
MlsI TGGCCA 1 cut(s) 521
MluCI AATT 3 cut(s) 691, 711, 717
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 1 cut(s) 83
MnlI CCTC 4 cut(s) 130, 142, 469, 725
Mox20I TGGCCA 1 cut(s) 521
Mph1103I ATGCAT 1 cut(s) 556
MscI TGGCCA 1 cut(s) 521
MslI CAYNNNNRTG 2 cut(s) 80, 740
Msp20I TGGCCA 1 cut(s) 521
MspI CCGG 3 cut(s) 150, 207, 772
MspR9I CCNGG 1 cut(s) 401
Mva1269I GAATGC 1 cut(s) 435
MvaI CCWGG 1 cut(s) 401
MvnI CGCG 2 cut(s) 58, 156
NdeII GATC 4 cut(s) 61, 216, 490, 750
NlaIII CATG 4 cut(s) 205, 376, 384, 739
NmuCI GTSAC 1 cut(s) 334
NsiI ATGCAT 1 cut(s) 556
NspI RCATGY 1 cut(s) 739
PagI TCATGA 1 cut(s) 201
PcsI WCGNNNNNNNCGW 1 cut(s) 23
PctI GAATGC 1 cut(s) 435
PfeI GAWTC 1 cut(s) 309
PflMI CCANNNNNTGG 1 cut(s) 542
PkrI GCNGC 1 cut(s) 155
PleI GAGTC 1 cut(s) 83
PpsI GAGTC 1 cut(s) 83
Psp6I CCWGG 1 cut(s) 399
PspGI CCWGG 1 cut(s) 399
PspPI GGNCC 1 cut(s) 403
PsrI GAACNNNNNNTAC 2 cut(s) 626, 658
PstNI CAGNNNCTG 1 cut(s) 754
PsuI RGATCY 1 cut(s) 750
RsaI GTAC 1 cut(s) 702
RsaNI GTAC 1 cut(s) 701
RseI CAYNNNNRTG 2 cut(s) 80, 740
SalI GTCGAC 1 cut(s) 25
SatI GCNGC 1 cut(s) 154
Sau3AI GATC 4 cut(s) 61, 216, 490, 750
Sau96I GGNCC 1 cut(s) 403
SchI GAGTC 1 cut(s) 83
ScrFI CCNGG 1 cut(s) 401
SetI ASST 5 cut(s) 72, 254, 281, 593, 794
SfaNI GCATC 3 cut(s) 94, 197, 541
SmiMI CAYNNNNRTG 2 cut(s) 80, 740
Sse9I AATT 3 cut(s) 691, 711, 717
SsiI CCGC 3 cut(s) 56, 154, 477
StyD4I CCNGG 1 cut(s) 399
StyI CCWWGG 2 cut(s) 406, 672
TaiI ACGT 1 cut(s) 254
TaqI TCGA 2 cut(s) 26, 765
TaqII GACCGA 1 cut(s) 565
TasI AATT 3 cut(s) 691, 711, 717
TauI GCSGC 1 cut(s) 156
TfiI GAWTC 1 cut(s) 309
TseFI GTSAC 1 cut(s) 334
Tsp45I GTSAC 1 cut(s) 334
TspDTI ATGAA 8 cut(s) 114, 190, 340, 361, 409, 553, 561, 618
Van91I CCANNNNNTGG 1 cut(s) 542
XapI RAATTY 1 cut(s) 691
XceI RCATGY 1 cut(s) 739
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XmiI GTMKAC 1 cut(s) 26
Zsp2I ATGCAT 1 cut(s) 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.