two-component response regulator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58080 |
| fragaria_vesca | FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050 |
| malus_domestica | MD15G1155800.v1.1 |
| prunus_persica | Prupe.7G259300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831 |
| rosa_laevigata | RLG00000015746 RLG00000019368 |
| rosa_multiflora | Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00110780 Rroxscaffold_2G00154780 |
| rosa_rugosa | Rorug01G0465900 Rorug01G0465900 Rorug02G0313900 |
| rosa_samantha | Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900 |
| rosa_wichuraiana | Rw2G001360 Rw2G029870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1447 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1813 |
| AciI | CCGC | 1 cut(s) | 874 |
| AclWI | GGATC | 2 cut(s) | 928, 1208 |
| AcoI | YGGCCR | 1 cut(s) | 765 |
| AcsI | RAATTY | 4 cut(s) | 539, 720, 1120, 1849 |
| AcuI | CTGAAG | 1 cut(s) | 113 |
| AdeI | CACNNNGTG | 1 cut(s) | 965 |
| AfaI | GTAC | 3 cut(s) | 684, 814, 1233 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 61, 1571, 1813 |
| AflIII | ACRYGT | 1 cut(s) | 412 |
| AgsI | TTSAA | 9 cut(s) | 373, 544, 701, 743, 1296, 1387, 1744, 1994, 2014 |
| AjnI | CCWGG | 6 cut(s) | 78, 213, 961, 1039, 1559, 1612 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1210, 1242, 1576, 1608, 1647, 1679 |
| AleI | CACNNNNGTG | 1 cut(s) | 1256 |
| Alw21I | GWGCWC | 3 cut(s) | 270, 396, 886 |
| Alw26I | GTCTC | 1 cut(s) | 110 |
| Alw44I | GTGCAC | 1 cut(s) | 882 |
| AlwI | GGATC | 2 cut(s) | 928, 1208 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1619 |
| Ama87I | CYCGRG | 1 cut(s) | 636 |
| AoxI | GGCC | 4 cut(s) | 12, 765, 1562, 1878 |
| ApaLI | GTGCAC | 1 cut(s) | 882 |
| ApeKI | GCWGC | 6 cut(s) | 519, 658, 677, 842, 1165, 1897 |
| ApoI | RAATTY | 4 cut(s) | 539, 720, 1120, 1849 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1018, 1134 |
| AsuC2I | CCSGG | 2 cut(s) | 62, 992 |
| AsuHPI | GGTGA | 4 cut(s) | 47, 229, 501, 942 |
| AsuII | TTCGAA | 1 cut(s) | 382 |
| AsuNHI | GCTAGC | 1 cut(s) | 830 |
| AvaI | CYCGRG | 1 cut(s) | 636 |
| AvaII | GGWCC | 9 cut(s) | 52, 286, 445, 559, 613, 909, 1033, 1616, 1816 |
| BaeGI | GKGCMC | 1 cut(s) | 886 |
| BalI | TGGCCA | 1 cut(s) | 767 |
| BanII | GRGCYC | 3 cut(s) | 126, 270, 396 |
| BauI | CACGAG | 1 cut(s) | 751 |
| BbsI | GAAGAC | 2 cut(s) | 934, 1356 |
| Bbv12I | GWGCWC | 3 cut(s) | 270, 396, 886 |
| BbvCI | CCTCAGC | 1 cut(s) | 1623 |
| BbvI | GCAGC | 6 cut(s) | 531, 645, 689, 829, 1177, 1909 |
| BccI | CCATC | 8 cut(s) | 35, 242, 625, 780, 884, 1492, 1976, 2063 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 640, 674, 1477, 1511 |
| BciT130I | CCWGG | 6 cut(s) | 80, 215, 963, 1041, 1561, 1614 |
| BclI | TGATCA | 1 cut(s) | 219 |
| BcnI | CCSGG | 2 cut(s) | 62, 992 |
| BcoDI | GTCTC | 1 cut(s) | 110 |
| BfaI | CTAG | 3 cut(s) | 831, 887, 1239 |
| BfmI | CTRYAG | 2 cut(s) | 776, 1834 |
| BfuAI | ACCTGC | 1 cut(s) | 1447 |
| BglII | AGATCT | 1 cut(s) | 901 |
| BisI | GCNGC | 6 cut(s) | 520, 659, 678, 843, 1166, 1898 |
| BlsI | GCNGC | 6 cut(s) | 521, 660, 679, 844, 1167, 1899 |
| BmcAI | AGTACT | 1 cut(s) | 814 |
| Bme1390I | CCNGG | 8 cut(s) | 62, 80, 215, 963, 992, 1041, 1561, 1614 |
| Bme18I | GGWCC | 9 cut(s) | 52, 286, 445, 559, 613, 909, 1033, 1616, 1816 |
| BmeT110I | CYCGRG | 1 cut(s) | 636 |
| BmiI | GGNNCC | 4 cut(s) | 125, 615, 1649, 1879 |
| BmrFI | CCNGG | 8 cut(s) | 62, 80, 215, 963, 992, 1041, 1561, 1614 |
| BmrI | ACTGGG | 1 cut(s) | 1938 |
| BmsI | GCATC | 2 cut(s) | 960, 1816 |
| BmtI | GCTAGC | 1 cut(s) | 834 |
| BmuI | ACTGGG | 1 cut(s) | 1938 |
| BpiI | GAAGAC | 2 cut(s) | 934, 1356 |
| BpmI | CTGGAG | 1 cut(s) | 1073 |
| Bpu10I | CCTNAGC | 3 cut(s) | 913, 1623, 1802 |
| Bpu14I | TTCGAA | 1 cut(s) | 382 |
| BpuEI | CTTGAG | 2 cut(s) | 284, 1078 |
| BpuMI | CCSGG | 2 cut(s) | 62, 992 |
| Bsa29I | ATCGAT | 1 cut(s) | 1438 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1434 |
| BsaJI | CCNNGG | 7 cut(s) | 349, 441, 635, 990, 1683, 1770, 1923 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1659, 1689 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 61, 1571, 1813 |
| Bse1I | ACTGG | 5 cut(s) | 139, 462, 1200, 1867, 1944 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1434 |
| BseBI | CCWGG | 6 cut(s) | 80, 215, 963, 1041, 1561, 1614 |
| BseCI | ATCGAT | 1 cut(s) | 1438 |
| BseDI | CCNNGG | 7 cut(s) | 349, 441, 635, 990, 1683, 1770, 1923 |
| BseGI | GGATG | 7 cut(s) | 46, 253, 617, 870, 975, 1435, 2074 |
| BseJI | GATNNNNATC | 1 cut(s) | 1434 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 61, 1571, 1813 |
| BseMII | CTCAG | 6 cut(s) | 121, 176, 537, 820, 1614, 1915 |
| BseNI | ACTGG | 5 cut(s) | 139, 462, 1200, 1867, 1944 |
| BseRI | GAGGAG | 1 cut(s) | 1405 |
| BseSI | GKGCMC | 1 cut(s) | 886 |
| BseXI | GCAGC | 6 cut(s) | 531, 645, 689, 829, 1177, 1909 |
| BsgI | GTGCAG | 1 cut(s) | 644 |
| BshFI | GGCC | 4 cut(s) | 14, 767, 1564, 1880 |
| BshVI | ATCGAT | 1 cut(s) | 1438 |
| BsiHKAI | GWGCWC | 3 cut(s) | 270, 396, 886 |
| BsiHKCI | CYCGRG | 1 cut(s) | 636 |
| BsiSI | CCGG | 2 cut(s) | 62, 992 |
| BslFI | GGGAC | 5 cut(s) | 510, 708, 1188, 1782, 2058 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 61, 1571, 1813 |
| BsmAI | GTCTC | 1 cut(s) | 110 |
| BsmFI | GGGAC | 5 cut(s) | 510, 708, 1188, 1782, 2058 |
| BsnI | GGCC | 4 cut(s) | 14, 767, 1564, 1880 |
| BsoBI | CYCGRG | 1 cut(s) | 636 |
| Bsp119I | TTCGAA | 1 cut(s) | 382 |
| Bsp1286I | GDGCHC | 4 cut(s) | 126, 270, 396, 886 |
| Bsp1407I | TGTACA | 1 cut(s) | 682 |
| Bsp143I | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| Bsp19I | CCATGG | 3 cut(s) | 349, 1683, 1923 |
| BspACI | CCGC | 1 cut(s) | 874 |
| BspANI | GGCC | 4 cut(s) | 14, 767, 1564, 1880 |
| BspCNI | CTCAG | 6 cut(s) | 120, 175, 536, 819, 1615, 1914 |
| BspDI | ATCGAT | 1 cut(s) | 1438 |
| BspLI | GGNNCC | 4 cut(s) | 125, 615, 1649, 1879 |
| BspMAI | CTGCAG | 2 cut(s) | 780, 1838 |
| BspMI | ACCTGC | 1 cut(s) | 1447 |
| BspOI | GCTAGC | 1 cut(s) | 834 |
| BspPI | GGATC | 2 cut(s) | 928, 1208 |
| BspQI | GCTCTTC | 1 cut(s) | 384 |
| BspT104I | TTCGAA | 1 cut(s) | 382 |
| BsrGI | TGTACA | 1 cut(s) | 682 |
| BsrI | ACTGG | 5 cut(s) | 139, 462, 1200, 1867, 1944 |
| BssECI | CCNNGG | 7 cut(s) | 349, 441, 635, 990, 1683, 1770, 1923 |
| BssMI | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| BssSI | CACGAG | 1 cut(s) | 751 |
| BssT1I | CCWWGG | 4 cut(s) | 349, 441, 1683, 1923 |
| Bst2BI | CACGAG | 1 cut(s) | 751 |
| Bst2UI | CCWGG | 6 cut(s) | 80, 215, 963, 1041, 1561, 1614 |
| Bst4CI | ACNGT | 6 cut(s) | 7, 56, 909, 1580, 1774, 1891 |
| Bst6I | CTCTTC | 1 cut(s) | 384 |
| BstAUI | TGTACA | 1 cut(s) | 682 |
| BstBI | TTCGAA | 1 cut(s) | 382 |
| BstC8I | GCNNGC | 8 cut(s) | 478, 517, 769, 832, 1095, 1104, 1508, 1533 |
| BstDSI | CCRYGG | 4 cut(s) | 349, 1683, 1770, 1923 |
| BstF5I | GGATG | 7 cut(s) | 46, 253, 617, 870, 975, 1435, 2074 |
| BstKTI | GATC | 6 cut(s) | 222, 529, 904, 923, 1216, 1519 |
| BstMAI | GTCTC | 1 cut(s) | 110 |
| BstMBI | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 173, 265, 274, 1099, 1103 |
| BstNI | CCWGG | 6 cut(s) | 80, 215, 963, 1041, 1561, 1614 |
| BstNSI | RCATGY | 2 cut(s) | 416, 1535 |
| BstSCI | CCNGG | 8 cut(s) | 60, 78, 213, 961, 990, 1039, 1559, 1612 |
| BstSFI | CTRYAG | 2 cut(s) | 776, 1834 |
| BstSLI | GKGCMC | 1 cut(s) | 886 |
| BstV1I | GCAGC | 6 cut(s) | 531, 645, 689, 829, 1177, 1909 |
| BstV2I | GAAGAC | 2 cut(s) | 934, 1356 |
| BstX2I | RGATCY | 1 cut(s) | 901 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1426, 1874 |
| BstYI | RGATCY | 1 cut(s) | 901 |
| Bsu15I | ATCGAT | 1 cut(s) | 1438 |
| BsuRI | GGCC | 4 cut(s) | 14, 767, 1564, 1880 |
| BsuTUI | ATCGAT | 1 cut(s) | 1438 |
| BtgI | CCRYGG | 4 cut(s) | 349, 1683, 1770, 1923 |
| BtsCI | GGATG | 7 cut(s) | 46, 253, 617, 870, 975, 1435, 2074 |
| BtsI | GCAGTG | 1 cut(s) | 176 |
| BtsIMutI | CAGTG | 5 cut(s) | 176, 222, 1762, 1909, 1951 |
| BveI | ACCTGC | 1 cut(s) | 1447 |
| Cac8I | GCNNGC | 8 cut(s) | 478, 517, 769, 832, 1095, 1104, 1508, 1533 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1619 |
| ClaI | ATCGAT | 1 cut(s) | 1438 |
| CsiI | ACCWGGT | 3 cut(s) | 213, 961, 1039 |
| Csp6I | GTAC | 3 cut(s) | 683, 813, 1232 |
| CviQI | GTAC | 3 cut(s) | 683, 813, 1232 |
| DpnI | GATC | 6 cut(s) | 221, 528, 903, 922, 1215, 1518 |
| DpnII | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| DraIII | CACNNNGTG | 1 cut(s) | 965 |
| EaeI | YGGCCR | 1 cut(s) | 765 |
| Eam1104I | CTCTTC | 1 cut(s) | 384 |
| EarI | CTCTTC | 1 cut(s) | 384 |
| Ecl136II | GAGCTC | 2 cut(s) | 268, 394 |
| Eco130I | CCWWGG | 4 cut(s) | 349, 441, 1683, 1923 |
| Eco147I | AGGCCT | 1 cut(s) | 1564 |
| Eco24I | GRGCYC | 3 cut(s) | 126, 270, 396 |
| Eco32I | GATATC | 1 cut(s) | 2020 |
| Eco47I | GGWCC | 9 cut(s) | 52, 286, 445, 559, 613, 909, 1033, 1616, 1816 |
| Eco53kI | GAGCTC | 2 cut(s) | 268, 394 |
| Eco57I | CTGAAG | 1 cut(s) | 113 |
| Eco88I | CYCGRG | 1 cut(s) | 636 |
| EcoICRI | GAGCTC | 2 cut(s) | 268, 394 |
| EcoO109I | RGGNCCY | 2 cut(s) | 613, 1616 |
| EcoRI | GAATTC | 1 cut(s) | 1849 |
| EcoRII | CCWGG | 6 cut(s) | 78, 213, 961, 1039, 1559, 1612 |
| EcoRV | GATATC | 1 cut(s) | 2020 |
| EcoT14I | CCWWGG | 4 cut(s) | 349, 441, 1683, 1923 |
| EcoT38I | GRGCYC | 3 cut(s) | 126, 270, 396 |
| ErhI | CCWWGG | 4 cut(s) | 349, 441, 1683, 1923 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1288, 1320, 1724, 1756 |
| FaqI | GGGAC | 5 cut(s) | 510, 708, 1188, 1782, 2058 |
| FbaI | TGATCA | 1 cut(s) | 219 |
| Fnu4HI | GCNGC | 6 cut(s) | 520, 659, 678, 843, 1166, 1898 |
| FokI | GGATG | 7 cut(s) | 53, 260, 604, 857, 982, 1442, 2081 |
| FriOI | GRGCYC | 3 cut(s) | 126, 270, 396 |
| Fsp4HI | GCNGC | 6 cut(s) | 520, 659, 678, 843, 1166, 1898 |
| FspBI | CTAG | 3 cut(s) | 831, 887, 1239 |
| GluI | GCNGC | 6 cut(s) | 520, 659, 678, 843, 1166, 1898 |
| GsuI | CTGGAG | 1 cut(s) | 1073 |
| HaeIII | GGCC | 4 cut(s) | 14, 767, 1564, 1880 |
| HapII | CCGG | 2 cut(s) | 62, 992 |
| HincII | GTYRAC | 1 cut(s) | 88 |
| HindII | GTYRAC | 1 cut(s) | 88 |
| HpaII | CCGG | 2 cut(s) | 62, 992 |
| HphI | GGTGA | 4 cut(s) | 47, 229, 501, 942 |
| Hpy166II | GTNNAC | 2 cut(s) | 88, 884 |
| Hpy188I | TCNGA | 6 cut(s) | 110, 132, 422, 526, 531, 1282 |
| Hpy188III | TCNNGA | 9 cut(s) | 309, 397, 467, 725, 751, 924, 1247, 1391, 1427 |
| Hpy8I | GTNNAC | 2 cut(s) | 88, 884 |
| HpyAV | CCTTC | 5 cut(s) | 4, 137, 331, 485, 1649 |
| HpyCH4III | ACNGT | 6 cut(s) | 7, 56, 909, 1580, 1774, 1891 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 173, 265, 274, 1099, 1103 |
| Ksp22I | TGATCA | 1 cut(s) | 219 |
| Kzo9I | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| LguI | GCTCTTC | 1 cut(s) | 384 |
| LmnI | GCTCC | 3 cut(s) | 129, 1092, 1963 |
| Lsp1109I | GCAGC | 6 cut(s) | 531, 645, 689, 829, 1177, 1909 |
| LweI | GCATC | 2 cut(s) | 960, 1816 |
| MabI | ACCWGGT | 3 cut(s) | 213, 961, 1039 |
| MaeI | CTAG | 3 cut(s) | 831, 887, 1239 |
| MaeIII | GTNAC | 3 cut(s) | 148, 359, 1043 |
| MalI | GATC | 6 cut(s) | 221, 528, 903, 922, 1215, 1518 |
| MboI | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| MfeI | CAATTG | 2 cut(s) | 1160, 1526 |
| MflI | RGATCY | 1 cut(s) | 901 |
| MhlI | GDGCHC | 4 cut(s) | 126, 270, 396, 886 |
| MlsI | TGGCCA | 1 cut(s) | 767 |
| MluNI | TGGCCA | 1 cut(s) | 767 |
| MlyI | GAGTC | 6 cut(s) | 431, 741, 798, 924, 1205, 1804 |
| MmeI | TCCRAC | 4 cut(s) | 1060, 1163, 1241, 1910 |
| Mox20I | TGGCCA | 1 cut(s) | 767 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1018, 1134 |
| MscI | TGGCCA | 1 cut(s) | 767 |
| MseI | TTAA | 5 cut(s) | 255, 983, 1601, 1631, 1871 |
| MslI | CAYNNNNRTG | 3 cut(s) | 606, 875, 1256 |
| Msp20I | TGGCCA | 1 cut(s) | 767 |
| MspA1I | CMGCKG | 1 cut(s) | 680 |
| MspI | CCGG | 2 cut(s) | 62, 992 |
| MspR9I | CCNGG | 8 cut(s) | 62, 80, 215, 963, 992, 1041, 1561, 1614 |
| MunI | CAATTG | 2 cut(s) | 1160, 1526 |
| MvaI | CCWGG | 6 cut(s) | 80, 215, 963, 1041, 1561, 1614 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 173, 265, 274, 1099, 1103 |
| NciI | CCSGG | 2 cut(s) | 62, 992 |
| NcoI | CCATGG | 3 cut(s) | 349, 1683, 1923 |
| NdeII | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| NheI | GCTAGC | 1 cut(s) | 830 |
| NlaIV | GGNNCC | 4 cut(s) | 125, 615, 1649, 1879 |
| NmuCI | GTSAC | 2 cut(s) | 359, 1043 |
| NspI | RCATGY | 2 cut(s) | 416, 1535 |
| NspV | TTCGAA | 1 cut(s) | 382 |
| OliI | CACNNNNGTG | 1 cut(s) | 1256 |
| PaeI | GCATGC | 1 cut(s) | 1535 |
| PceI | AGGCCT | 1 cut(s) | 1564 |
| PciI | ACATGT | 1 cut(s) | 412 |
| PciSI | GCTCTTC | 1 cut(s) | 384 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1018, 1134 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1813 |
| PkrI | GCNGC | 6 cut(s) | 521, 660, 679, 844, 1167, 1899 |
| PleI | GAGTC | 6 cut(s) | 431, 741, 798, 924, 1204, 1803 |
| PpsI | GAGTC | 6 cut(s) | 431, 741, 798, 924, 1204, 1803 |
| PpuMI | RGGWCCY | 2 cut(s) | 613, 1616 |
| PscI | ACATGT | 1 cut(s) | 412 |
| Psp124BI | GAGCTC | 2 cut(s) | 270, 396 |
| Psp5II | RGGWCCY | 2 cut(s) | 613, 1616 |
| Psp6I | CCWGG | 6 cut(s) | 78, 213, 961, 1039, 1559, 1612 |
| PspGI | CCWGG | 6 cut(s) | 78, 213, 961, 1039, 1559, 1612 |
| PspN4I | GGNNCC | 4 cut(s) | 125, 615, 1649, 1879 |
| PspPPI | RGGWCCY | 2 cut(s) | 613, 1616 |
| PstI | CTGCAG | 2 cut(s) | 780, 1838 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1619 |
| PsuI | RGATCY | 1 cut(s) | 901 |
| PvuII | CAGCTG | 1 cut(s) | 680 |
| RsaI | GTAC | 3 cut(s) | 684, 814, 1233 |
| RsaNI | GTAC | 3 cut(s) | 683, 813, 1232 |
| RseI | CAYNNNNRTG | 3 cut(s) | 606, 875, 1256 |
| SacI | GAGCTC | 2 cut(s) | 270, 396 |
| SapI | GCTCTTC | 1 cut(s) | 384 |
| SaqAI | TTAA | 5 cut(s) | 255, 983, 1601, 1631, 1871 |
| SatI | GCNGC | 6 cut(s) | 520, 659, 678, 843, 1166, 1898 |
| Sau3AI | GATC | 6 cut(s) | 219, 526, 901, 920, 1213, 1516 |
| ScaI | AGTACT | 1 cut(s) | 814 |
| SchI | GAGTC | 6 cut(s) | 431, 741, 798, 924, 1205, 1804 |
| ScrFI | CCNGG | 8 cut(s) | 62, 80, 215, 963, 992, 1041, 1561, 1614 |
| SduI | GDGCHC | 4 cut(s) | 126, 270, 396, 886 |
| SexAI | ACCWGGT | 3 cut(s) | 213, 961, 1039 |
| SfaNI | GCATC | 2 cut(s) | 960, 1816 |
| SfcI | CTRYAG | 2 cut(s) | 776, 1834 |
| SfuI | TTCGAA | 1 cut(s) | 382 |
| SinI | GGWCC | 9 cut(s) | 52, 286, 445, 559, 613, 909, 1033, 1616, 1816 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 606, 875, 1256 |
| SmlI | CTYRAG | 2 cut(s) | 263, 1057 |
| SmoI | CTYRAG | 2 cut(s) | 263, 1057 |
| SphI | GCATGC | 1 cut(s) | 1535 |
| SseBI | AGGCCT | 1 cut(s) | 1564 |
| SsiI | CCGC | 1 cut(s) | 874 |
| SspMI | CTAG | 3 cut(s) | 831, 887, 1239 |
| SstI | GAGCTC | 2 cut(s) | 270, 396 |
| StuI | AGGCCT | 1 cut(s) | 1564 |
| StyD4I | CCNGG | 8 cut(s) | 60, 78, 213, 961, 990, 1039, 1559, 1612 |
| StyI | CCWWGG | 4 cut(s) | 349, 441, 1683, 1923 |
| TaaI | ACNGT | 6 cut(s) | 7, 56, 909, 1580, 1774, 1891 |
| TaqI | TCGA | 7 cut(s) | 171, 382, 435, 650, 1438, 1487, 1515 |
| TaqII | GACCGA | 1 cut(s) | 1350 |
| TatI | WGTACW | 2 cut(s) | 682, 812 |
| Tru1I | TTAA | 5 cut(s) | 255, 983, 1601, 1631, 1871 |
| Tru9I | TTAA | 5 cut(s) | 255, 983, 1601, 1631, 1871 |
| TscAI | CASTG | 5 cut(s) | 183, 229, 1762, 1909, 1951 |
| TseFI | GTSAC | 2 cut(s) | 359, 1043 |
| TseI | GCWGC | 6 cut(s) | 519, 658, 677, 842, 1165, 1897 |
| Tsp45I | GTSAC | 2 cut(s) | 359, 1043 |
| TspGWI | ACGGA | 1 cut(s) | 678 |
| TspRI | CASTG | 5 cut(s) | 183, 229, 1762, 1909, 1951 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1813 |
| VneI | GTGCAC | 1 cut(s) | 882 |
| VpaK11BI | GGWCC | 9 cut(s) | 52, 286, 445, 559, 613, 909, 1033, 1616, 1816 |
| XapI | RAATTY | 4 cut(s) | 539, 720, 1120, 1849 |
| XceI | RCATGY | 2 cut(s) | 416, 1535 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1704 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1018, 1134 |
| XspI | CTAG | 3 cut(s) | 831, 887, 1239 |
| ZrmI | AGTACT | 1 cut(s) | 814 |