Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Forward (+)

91281173 .. 91285042

Gene Structure 3870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00154780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGACTGTGGAGGACCAAAGAGACCGGTTTCCGGAGGGTATGAGAGTCCTAGCCGTCGACGACGACCCAACTTGTCTCAAATTCTTGGAGGGTTTGCTTCGCAAATGCAAGTATCATGTTACTACTACCAATCAGGCAATCAAGGCATTGGAAATGTTGAGGGAAAACAGAGATAAGTATGACCTAGTGATTAGTGATGTTAATATGCCTGACATGGATGGCTTTCAGCTCCTTGAACTCGTGGGACTTGAGATGGACTTACCTGTGATCAGTAAGCATGAACTTTCTCTTGAGAATGTGTATGACTTCTTTAGTATTGTTCGAATTGGATTTGATTTGTTGTCAGGATATAGTGATTTCAAACTTGTAATGAAGGGAATCTCCCATGGTGCTTGTAATTATTTGTTGAAACCTGTTAGAATTGAAGAGCTCAAGAATATCTGGCAACATGTAGTCCGGAAAAAGTTCGACTCCAAGGACCAAAAAAAGTCTTCCAATCAAGACAAGTGCAATGGAATTGGAGAAGGTGTGCAAGGGGCTTCGCCAACAGGTAGTTCAGATCAGAATGGGAAACTGAGCAAGAAAAGAAAGGACCAAAATGGAGACGAGGAAGCAGAAAGTGAAGATGATGAACATGAGACTGAGGACCCATCTAGTCAGAAGAAGCCTCGGGTAGTTTGGTATGGGGAGTTACACAGAAAGTTTGTGGCAGCTGTAAATCAGTTGGGAGTTGAAAGGGCTGTTCCGAAGAAAATTCTTGACCTGATGGATGTTGAAGGACTATCAAGGGAAAATGTGGCGAGCCATCTACAGAAATATCGGCAATACCTTAAAAGAATAAGCAGCGGCATGGTTGGTTCTTTGGGAGGAAAAGAGTCCTCTTATGTGCGCATGGGTGTGTTAGATGGATCTAGAGATCTACAATCCTTGAGATCAGGGAGAATCTCTAGTACTACTTTATCAACATACACATCTGGTGGGATGCTTAGTAGATTAAACTCGCCGGCTGGTTTGAGCACAGGAGGAATTACTTCTTCCGGTCTGAGCCAACCTGGTCACTCCCAAAACTTGAGCAACTATTTTAATCCTTTTGCAAAGCTCCAGCCAACTGTGCCTCCAAACCAAAGTTCAAATTTATTCCAAGCGACTCCAGCATTATTACAGCTCAATCAGTTGCAGCAGAGCAAGTGCATCACCCACAATGGGAAGTCCTATCCCGACAATGATTCAACAAACTATACAATATCATCTACGTTTCGGAATTCAGGAGTGTCTTCTAGTCCACTCCCTTCTGATTCCAATTTTTCGAGCAATCATTTGATGTTACATGGCATACCACAACAAACACATAGTACGGGAGTCTTTGGAAATCCGACTTCTGTTAAAGTATCATTTGACATCGGCATCTCTGGCTCCCCTAATTTTCTGGATTACAATCGGTGTAGTGAAAACTTTCAGGGTGGTGCACGGTTATCCAGCTTTCCATCAAATACTTTGCCAATGAGTGAGCCTTTTAATCATGGTCAAATGCATGCTAATAACTTGGGTGTTTCTTCTGGTAGGCCACAAATTGGGAACACCATCAATGATTTTTCTTCTGTAAGTGCACTTTCAGCTCCTGTTGATGAATTAAGAGGAACTGCACAGAACCAAGAAGGCTTGATTGGTGATGTTGTACCGACATTGAGTTACATGCCAAAGCAAAGGTGGGAAGAACACAAGGAAGGTTACAACCACGAGTTGAATCAAACTTTCAGTGGCATAAATTCCCCGTGTTCTACATTAGGCATTAATGGCCCTGTAAGCCAGAGTGTGGATCAAAACATTGCAGTATGCAGTTATGAAAGGAATTCATCTTTATTTGACCGGTTAAATGGGGCCACTGCAATGTTTGAGCAACCAAGTGAGGCTGGTAAGTCTTCCATGGAGACAAAGATGAAGCTGAATGAGGACTACTTCTTGGAGCAAATAAAGTCACCTAGTGGCTTCGTTCAGAATAGTTATGAATCATTGAATGATATAATGAGCACAATAATGAAACGGGAACAAAATGAGAATCTCTTACTGGATGCAGAATTTGGATTCGATGCGTACTCCCTTGGCTCATGTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

704

Amino Acids

77.73

Weight (kDa)

5.67

Isoelectric Point (pI)

44.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	16 - 90	1.9e-13	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	890
AccB7I	CCANNNNNTGG	2 cut(s)	1571, 1813
AccI	GTMKAC	1 cut(s)	57
AccIII	TCCGGA	2 cut(s)	31, 456
AciI	CCGC	1 cut(s)	846
AclWI	GGATC	2 cut(s)	916, 1824
AcsI	RAATTY	7 cut(s)	80, 753, 1132, 1261, 1765, 1849, 2075
AdeI	CACNNNGTG	1 cut(s)	1982
AfaI	GTAC	4 cut(s)	952, 1354, 1677, 2093
AfiI	CCNNNNNNNGG	4 cut(s)	31, 1203, 1571, 1813
AflIII	ACRYGT	1 cut(s)	448
AgeI	ACCGGT	2 cut(s)	24, 1866
AjnI	CCWGG	1 cut(s)	1051
AjuI	GAANNNNNNNTTGG	6 cut(s)	538, 570, 1111, 1143, 1647, 1679
AluBI	AGCT	8 cut(s)	229, 430, 713, 1099, 1165, 1479, 1616, 1942
AluI	AGCT	8 cut(s)	229, 430, 713, 1099, 1165, 1479, 1616, 1942
Alw21I	GWGCWC	5 cut(s)	432, 1019, 1468, 1609, 2030
Alw26I	GTCTC	5 cut(s)	15, 80, 597, 632, 1922
Alw44I	GTGCAC	2 cut(s)	1464, 1605
AlwI	GGATC	2 cut(s)	916, 1824
AlwNI	CAGNNNCTG	1 cut(s)	1619
Ama87I	CYCGRG	1 cut(s)	669
Aor13HI	TCCGGA	2 cut(s)	31, 456
AoxI	GGCC	3 cut(s)	1562, 1795, 1878
ApaLI	GTGCAC	2 cut(s)	1464, 1605
ApeKI	GCWGC	3 cut(s)	710, 843, 1177
ApoI	RAATTY	7 cut(s)	80, 753, 1132, 1261, 1765, 1849, 2075
AseI	ATTAAT	1 cut(s)	1791
AsiGI	ACCGGT	2 cut(s)	24, 1866
Asp700I	GAANNNNTTC	3 cut(s)	464, 1030, 1452
AspLEI	GCGC	1 cut(s)	891
AspS9I	GGNCC	6 cut(s)	13, 478, 592, 646, 1796, 1878
AsuHPI	GGTGA	3 cut(s)	1186, 1679, 1968
AsuII	TTCGAA	1 cut(s)	322
AvaI	CYCGRG	1 cut(s)	669
AvaII	GGWCC	4 cut(s)	13, 478, 592, 646
BaeGI	GKGCMC	2 cut(s)	1468, 1609
BanII	GRGCYC	1 cut(s)	432
BauI	CACGAG	2 cut(s)	239, 1736
BbsI	GAAGAC	3 cut(s)	483, 1266, 1911
Bbv12I	GWGCWC	5 cut(s)	432, 1019, 1468, 1609, 2030
BbvI	GCAGC	3 cut(s)	722, 855, 1189
BccI	CCATC	8 cut(s)	212, 247, 658, 760, 813, 899, 1492, 1589
BceAI	ACGGC	1 cut(s)	38
BciT130I	CCWGG	1 cut(s)	1053
BclI	TGATCA	1 cut(s)	267
BcoDI	GTCTC	5 cut(s)	15, 80, 597, 632, 1922
BfaI	CTAG	7 cut(s)	50, 185, 654, 912, 948, 1278, 1980
BfmI	CTRYAG	1 cut(s)	809
BglII	AGATCT	1 cut(s)	916
BisI	GCNGC	4 cut(s)	711, 844, 847, 1178
BlsI	GCNGC	4 cut(s)	712, 845, 848, 1179
BmcAI	AGTACT	1 cut(s)	952
Bme1390I	CCNGG	1 cut(s)	1053
Bme18I	GGWCC	4 cut(s)	13, 478, 592, 646
BmeT110I	CYCGRG	1 cut(s)	669
BmgT120I	GGNCC	6 cut(s)	13, 478, 592, 646, 1796, 1878
BmiI	GGNNCC	3 cut(s)	648, 1414, 1879
BmrFI	CCNGG	1 cut(s)	1053
BmsI	GCATC	5 cut(s)	972, 1200, 1413, 2059, 2077
BpiI	GAAGAC	3 cut(s)	483, 1266, 1911
BpmI	CTGGAG	2 cut(s)	1085, 1134
Bpu14I	TTCGAA	1 cut(s)	322
BpuEI	CTTGAG	5 cut(s)	269, 311, 416, 949, 1090
BsaBI	GATNNNNATC	1 cut(s)	1434
BsaI	GGTCTC	1 cut(s)	15
BsaJI	CCNNGG	5 cut(s)	385, 474, 668, 1923, 2098
BsaWI	WCCGGW	5 cut(s)	24, 31, 456, 1037, 1866
BsaXI	ACNNNNNCTCC	4 cut(s)	513, 543, 1099, 1129
Bsc4I	CCNNNNNNNGG	4 cut(s)	31, 1203, 1571, 1813
Bse118I	RCCGGY	3 cut(s)	24, 1003, 1866
Bse1I	ACTGG	1 cut(s)	2070
Bse3DI	GCAATG	3 cut(s)	517, 1824, 1893
Bse8I	GATNNNNATC	1 cut(s)	1434
BseAI	TCCGGA	2 cut(s)	31, 456
BseBI	CCWGG	1 cut(s)	1053
BseDI	CCNNGG	5 cut(s)	385, 474, 668, 1923, 2098
BseGI	GGATG	4 cut(s)	223, 775, 987, 2074
BseJI	GATNNNNATC	1 cut(s)	1434
BseLI	CCNNNNNNNGG	4 cut(s)	31, 1203, 1571, 1813
BseMI	GCAATG	3 cut(s)	517, 1824, 1893
BseMII	CTCAG	3 cut(s)	566, 633, 1034
BseNI	ACTGG	1 cut(s)	2070
BseSI	GKGCMC	2 cut(s)	1468, 1609
BseXI	GCAGC	3 cut(s)	722, 855, 1189
BsgI	GTGCAG	1 cut(s)	1626
BshFI	GGCC	3 cut(s)	1564, 1797, 1880
BshTI	ACCGGT	2 cut(s)	24, 1866
BsiHKAI	GWGCWC	5 cut(s)	432, 1019, 1468, 1609, 2030
BsiHKCI	CYCGRG	1 cut(s)	669
BsiSI	CCGG	6 cut(s)	25, 32, 457, 1004, 1038, 1867
BslFI	GGGAC	1 cut(s)	258
BslI	CCNNNNNNNGG	4 cut(s)	31, 1203, 1571, 1813
BsmAI	GTCTC	5 cut(s)	15, 80, 597, 632, 1922
BsmBI	CGTCTC	1 cut(s)	597
BsmFI	GGGAC	1 cut(s)	258
BsnI	GGCC	3 cut(s)	1564, 1797, 1880
Bso31I	GGTCTC	1 cut(s)	15
BsoBI	CYCGRG	1 cut(s)	669
Bsp119I	TTCGAA	1 cut(s)	322
Bsp1286I	GDGCHC	5 cut(s)	432, 1019, 1468, 1609, 2030
Bsp13I	TCCGGA	2 cut(s)	31, 456
Bsp143I	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
Bsp19I	CCATGG	2 cut(s)	385, 1923
BspACI	CCGC	1 cut(s)	846
BspANI	GGCC	3 cut(s)	1564, 1797, 1880
BspCNI	CTCAG	3 cut(s)	567, 634, 1035
BspEI	TCCGGA	2 cut(s)	31, 456
BspLI	GGNNCC	3 cut(s)	648, 1414, 1879
BspPI	GGATC	2 cut(s)	916, 1824
BspQI	GCTCTTC	1 cut(s)	420
BspT104I	TTCGAA	1 cut(s)	322
BspTNI	GGTCTC	1 cut(s)	15
BsrDI	GCAATG	3 cut(s)	517, 1824, 1893
BsrFI	RCCGGY	3 cut(s)	24, 1003, 1866
BsrI	ACTGG	1 cut(s)	2070
BssAI	RCCGGY	3 cut(s)	24, 1003, 1866
BssECI	CCNNGG	5 cut(s)	385, 474, 668, 1923, 2098
BssMI	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
BssSI	CACGAG	2 cut(s)	239, 1736
BssT1I	CCWWGG	4 cut(s)	385, 474, 1923, 2098
Bst2BI	CACGAG	2 cut(s)	239, 1736
Bst2UI	CCWGG	1 cut(s)	1053
Bst4CI	ACNGT	3 cut(s)	7, 1111, 1470
Bst6I	CTCTTC	1 cut(s)	420
BstBI	TTCGAA	1 cut(s)	322
BstC8I	GCNNGC	3 cut(s)	802, 1005, 1533
BstDEI	CTNAG	4 cut(s)	575, 642, 986, 1043
BstDSI	CCRYGG	2 cut(s)	385, 1923
BstF5I	GGATG	4 cut(s)	223, 775, 987, 2074
BstHHI	GCGC	1 cut(s)	891
BstKTI	GATC	6 cut(s)	270, 562, 911, 919, 935, 1819
BstMAI	GTCTC	5 cut(s)	15, 80, 597, 632, 1922
BstMBI	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
BstMWI	GCNNNNNNNGC	7 cut(s)	143, 1111, 1151, 1410, 1613, 1794, 1803
BstNI	CCWGG	1 cut(s)	1053
BstNSI	RCATGY	3 cut(s)	452, 1535, 1696
BstSCI	CCNGG	1 cut(s)	1051
BstSFI	CTRYAG	1 cut(s)	809
BstSLI	GKGCMC	2 cut(s)	1468, 1609
BstV1I	GCAGC	3 cut(s)	722, 855, 1189
BstV2I	GAAGAC	3 cut(s)	483, 1266, 1911
BstX2I	RGATCY	2 cut(s)	908, 916
BstYI	RGATCY	2 cut(s)	908, 916
BsuRI	GGCC	3 cut(s)	1564, 1797, 1880
BtgI	CCRYGG	2 cut(s)	385, 1923
BtsCI	GGATG	4 cut(s)	223, 775, 987, 2074
BtsI	GCAGTG	1 cut(s)	1881
BtsIMutI	CAGTG	2 cut(s)	1762, 1881
Cac8I	GCNNGC	3 cut(s)	802, 1005, 1533
CaiI	CAGNNNCTG	1 cut(s)	1619
CfoI	GCGC	1 cut(s)	891
Cfr10I	RCCGGY	3 cut(s)	24, 1003, 1866
Cfr13I	GGNCC	6 cut(s)	13, 478, 592, 646, 1796, 1878
CsiI	ACCWGGT	1 cut(s)	1051
Csp6I	GTAC	4 cut(s)	951, 1353, 1676, 2092
CspAI	ACCGGT	2 cut(s)	24, 1866
CviQI	GTAC	4 cut(s)	951, 1353, 1676, 2092
DdeI	CTNAG	4 cut(s)	575, 642, 986, 1043
DpnI	GATC	6 cut(s)	269, 561, 910, 918, 934, 1818
DpnII	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
DraIII	CACNNNGTG	1 cut(s)	1982
Eam1104I	CTCTTC	1 cut(s)	420
EarI	CTCTTC	1 cut(s)	420
Ecl136II	GAGCTC	1 cut(s)	430
Eco130I	CCWWGG	4 cut(s)	385, 474, 1923, 2098
Eco24I	GRGCYC	1 cut(s)	432
Eco31I	GGTCTC	1 cut(s)	15
Eco47I	GGWCC	4 cut(s)	13, 478, 592, 646
Eco53kI	GAGCTC	1 cut(s)	430
Eco88I	CYCGRG	1 cut(s)	669
EcoICRI	GAGCTC	1 cut(s)	430
EcoO109I	RGGNCCY	1 cut(s)	646
EcoRI	GAATTC	2 cut(s)	1261, 1849
EcoRII	CCWGG	1 cut(s)	1051
EcoT14I	CCWWGG	4 cut(s)	385, 474, 1923, 2098
EcoT22I	ATGCAT	1 cut(s)	1533
EcoT38I	GRGCYC	1 cut(s)	432
ErhI	CCWWGG	4 cut(s)	385, 474, 1923, 2098
Esp3I	CGTCTC	1 cut(s)	597
FaqI	GGGAC	1 cut(s)	258
FbaI	TGATCA	1 cut(s)	267
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	4 cut(s)	711, 844, 847, 1178
FokI	GGATG	4 cut(s)	230, 782, 994, 2081
FriOI	GRGCYC	1 cut(s)	432
Fsp4HI	GCNGC	4 cut(s)	711, 844, 847, 1178
FspAI	RTGCGCAY	1 cut(s)	890
FspBI	CTAG	7 cut(s)	50, 185, 654, 912, 948, 1278, 1980
FspI	TGCGCA	1 cut(s)	890
GlaI	GCGC	1 cut(s)	890
GluI	GCNGC	4 cut(s)	711, 844, 847, 1178
GsuI	CTGGAG	2 cut(s)	1085, 1134
HaeIII	GGCC	3 cut(s)	1564, 1797, 1880
HapII	CCGG	6 cut(s)	25, 32, 457, 1004, 1038, 1867
HhaI	GCGC	1 cut(s)	891
Hin6I	GCGC	1 cut(s)	889
HinP1I	GCGC	1 cut(s)	889
HincII	GTYRAC	1 cut(s)	58
HindII	GTYRAC	1 cut(s)	58
HpaII	CCGG	6 cut(s)	25, 32, 457, 1004, 1038, 1867
HphI	GGTGA	3 cut(s)	1186, 1679, 1968
Hpy166II	GTNNAC	4 cut(s)	58, 1283, 1466, 1607
Hpy188I	TCNGA	9 cut(s)	559, 564, 660, 747, 1044, 1260, 1294, 1374, 1995
Hpy8I	GTNNAC	4 cut(s)	58, 1283, 1466, 1607
Hpy99I	CGWCG	3 cut(s)	59, 62, 65
HpyAV	CCTTC	6 cut(s)	367, 518, 770, 1299, 1649, 1718
HpyCH4III	ACNGT	3 cut(s)	7, 1111, 1470
HpyCH4IV	ACGT	1 cut(s)	1253
HpyF10VI	GCNNNNNNNGC	7 cut(s)	143, 1111, 1151, 1410, 1613, 1794, 1803
HpyF3I	CTNAG	4 cut(s)	575, 642, 986, 1043
HpySE526I	ACGT	1 cut(s)	1253
HspAI	GCGC	1 cut(s)	889
Kpn2I	TCCGGA	2 cut(s)	31, 456
KroI	GCCGGC	1 cut(s)	1003
KroNI	GCCGGC	1 cut(s)	1005
Ksp22I	TGATCA	1 cut(s)	267
Kzo9I	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
LguI	GCTCTTC	1 cut(s)	420
LmnI	GCTCC	5 cut(s)	234, 1104, 1418, 1621, 1963
Lsp1109I	GCAGC	3 cut(s)	722, 855, 1189
LweI	GCATC	5 cut(s)	972, 1200, 1413, 2059, 2077
MabI	ACCWGGT	1 cut(s)	1051
MaeI	CTAG	7 cut(s)	50, 185, 654, 912, 948, 1278, 1980
MaeII	ACGT	1 cut(s)	1253
MaeIII	GTNAC	7 cut(s)	118, 690, 1055, 1323, 1688, 1727, 1974
MalI	GATC	6 cut(s)	269, 561, 910, 918, 934, 1818
MboI	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
MflI	RGATCY	2 cut(s)	908, 916
MhlI	GDGCHC	5 cut(s)	432, 1019, 1468, 1609, 2030
MlyI	GAGTC	5 cut(s)	54, 464, 884, 1141, 1368
MmeI	TCCRAC	1 cut(s)	1397
Mph1103I	ATGCAT	1 cut(s)	1533
MroI	TCCGGA	2 cut(s)	31, 456
MroNI	GCCGGC	1 cut(s)	1003
MroXI	GAANNNNTTC	3 cut(s)	464, 1030, 1452
MseI	TTAA	9 cut(s)	201, 831, 995, 1083, 1383, 1515, 1631, 1791, 1871
MslI	CAYNNNNRTG	4 cut(s)	896, 1886, 2033, 2110
MspA1I	CMGCKG	2 cut(s)	713, 846
MspI	CCGG	6 cut(s)	25, 32, 457, 1004, 1038, 1867
MspR9I	CCNGG	1 cut(s)	1053
MvaI	CCWGG	1 cut(s)	1053
MwoI	GCNNNNNNNGC	7 cut(s)	143, 1111, 1151, 1410, 1613, 1794, 1803
NaeI	GCCGGC	1 cut(s)	1005
NcoI	CCATGG	2 cut(s)	385, 1923
NdeII	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
NgoMIV	GCCGGC	1 cut(s)	1003
NlaIV	GGNNCC	3 cut(s)	648, 1414, 1879
NmuCI	GTSAC	2 cut(s)	1055, 1974
NsbI	TGCGCA	1 cut(s)	890
NsiI	ATGCAT	1 cut(s)	1533
NspI	RCATGY	3 cut(s)	452, 1535, 1696
NspV	TTCGAA	1 cut(s)	322
PaeI	GCATGC	1 cut(s)	1535
PciI	ACATGT	1 cut(s)	448
PciSI	GCTCTTC	1 cut(s)	420
PdiI	GCCGGC	1 cut(s)	1005
PdmI	GAANNNNTTC	3 cut(s)	464, 1030, 1452
PfeI	GAWTC	8 cut(s)	378, 942, 1226, 1295, 1744, 2006, 2056, 2082
PflMI	CCANNNNNTGG	2 cut(s)	1571, 1813
PinAI	ACCGGT	2 cut(s)	24, 1866
PkrI	GCNGC	4 cut(s)	712, 845, 848, 1179
PleI	GAGTC	5 cut(s)	53, 464, 883, 1141, 1367
PpsI	GAGTC	5 cut(s)	53, 464, 883, 1141, 1367
PpuMI	RGGWCCY	1 cut(s)	646
PscI	ACATGT	1 cut(s)	448
PshBI	ATTAAT	1 cut(s)	1791
Psp124BI	GAGCTC	1 cut(s)	432
Psp5II	RGGWCCY	1 cut(s)	646
Psp6I	CCWGG	1 cut(s)	1051
PspGI	CCWGG	1 cut(s)	1051
PspN4I	GGNNCC	3 cut(s)	648, 1414, 1879
PspPI	GGNCC	6 cut(s)	13, 478, 592, 646, 1796, 1878
PspPPI	RGGWCCY	1 cut(s)	646
PstNI	CAGNNNCTG	1 cut(s)	1619
PsuI	RGATCY	2 cut(s)	908, 916
PvuII	CAGCTG	1 cut(s)	713
RsaI	GTAC	4 cut(s)	952, 1354, 1677, 2093
RsaNI	GTAC	4 cut(s)	951, 1353, 1676, 2092
RseI	CAYNNNNRTG	4 cut(s)	896, 1886, 2033, 2110
SacI	GAGCTC	1 cut(s)	432
SalI	GTCGAC	1 cut(s)	56
SapI	GCTCTTC	1 cut(s)	420
SaqAI	TTAA	9 cut(s)	201, 831, 995, 1083, 1383, 1515, 1631, 1791, 1871
SatI	GCNGC	4 cut(s)	711, 844, 847, 1178
Sau3AI	GATC	6 cut(s)	267, 559, 908, 916, 932, 1816
Sau96I	GGNCC	6 cut(s)	13, 478, 592, 646, 1796, 1878
ScaI	AGTACT	1 cut(s)	952
SchI	GAGTC	5 cut(s)	54, 464, 884, 1141, 1368
ScrFI	CCNGG	1 cut(s)	1053
SduI	GDGCHC	5 cut(s)	432, 1019, 1468, 1609, 2030
SexAI	ACCWGGT	1 cut(s)	1051
SfaNI	GCATC	5 cut(s)	972, 1200, 1413, 2059, 2077
SfcI	CTRYAG	1 cut(s)	809
SfuI	TTCGAA	1 cut(s)	322
SgrDI	CGTCGACG	1 cut(s)	56
SinI	GGWCC	4 cut(s)	13, 478, 592, 646
SmiMI	CAYNNNNRTG	4 cut(s)	896, 1886, 2033, 2110
SmlI	CTYRAG	5 cut(s)	248, 290, 431, 928, 1069
SmoI	CTYRAG	5 cut(s)	248, 290, 431, 928, 1069
SphI	GCATGC	1 cut(s)	1535
SsiI	CCGC	1 cut(s)	846
SspMI	CTAG	7 cut(s)	50, 185, 654, 912, 948, 1278, 1980
SstI	GAGCTC	1 cut(s)	432
StyD4I	CCNGG	1 cut(s)	1051
StyI	CCWWGG	4 cut(s)	385, 474, 1923, 2098
TaaI	ACNGT	3 cut(s)	7, 1111, 1470
TaiI	ACGT	1 cut(s)	1256
TaqI	TCGA	5 cut(s)	57, 322, 468, 1307, 2085
TatI	WGTACW	1 cut(s)	950
TauI	GCSGC	1 cut(s)	849
TfiI	GAWTC	8 cut(s)	378, 942, 1226, 1295, 1744, 2006, 2056, 2082
Tru1I	TTAA	9 cut(s)	201, 831, 995, 1083, 1383, 1515, 1631, 1791, 1871
Tru9I	TTAA	9 cut(s)	201, 831, 995, 1083, 1383, 1515, 1631, 1791, 1871
TscAI	CASTG	2 cut(s)	1762, 1888
TseFI	GTSAC	2 cut(s)	1055, 1974
TseI	GCWGC	3 cut(s)	710, 843, 1177
Tsp45I	GTSAC	2 cut(s)	1055, 1974
TspDTI	ATGAA	9 cut(s)	294, 386, 645, 1641, 1842, 1857, 1952, 2019, 2051
TspRI	CASTG	2 cut(s)	1762, 1888
Van91I	CCANNNNNTGG	2 cut(s)	1571, 1813
VneI	GTGCAC	2 cut(s)	1464, 1605
VpaK11BI	GGWCC	4 cut(s)	13, 478, 592, 646
VspI	ATTAAT	1 cut(s)	1791
XapI	RAATTY	7 cut(s)	80, 753, 1132, 1261, 1765, 1849, 2075
XbaI	TCTAGA	1 cut(s)	911
XceI	RCATGY	3 cut(s)	452, 1535, 1696
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1704
XmiI	GTMKAC	1 cut(s)	57
XmnI	GAANNNNTTC	3 cut(s)	464, 1030, 1452
XspI	CTAG	7 cut(s)	50, 185, 654, 912, 948, 1278, 1980
ZrmI	AGTACT	1 cut(s)	952
Zsp2I	ATGCAT	1 cut(s)	1533

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.