Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Forward (+)

52202894 .. 52206161

Gene Structure 3268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG372800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGATGCGAAGGACCAACTGGGAGGTTCTGTTGGTGATCAGAATGGGGATATGGATCGGTTTCCGGATGGTATGCGTGTCCTGGCGGTTGATGACGACCTAACTTATCTCAAATTCTTGGAGGCTACGCTGCGTAAATGCAATTATGAGGTAACTACCGCTAATCATGCATACGAGGCACTCCAAATTTTGAGGGAAAACAGAAACAAGTTTGACCTGGTAATCAGTGATGTACAGATGCCAGATATGGATGGCTTTCAGCTCCTAAAGCTCTTAGGGCACGAAATGGACCTACCTGTAATCATGGTGTCAGGCAATGGTGATACTGAGCTTATGAAGAAGGGAATCTCCCATGGTGCTTGTTGCTATTTGGTGAAACCTGTTAACATTGAAGTGTTCAAGACTATTTGGCAACATGTCTTCCGGAGAAAAAAGTTGAACTCTAAGGATCAATGTAAGTCTTGCGATCAAGACAAGGTCTGCAAAGGAACAGGAGAAAGTGAAGAAGGGATGTCAGCAGCAAGTAGTTCAGATAAGAATGGAAAACACAAAAGAAAAAGGAAGCACCAAAAGGAAGATGATGAAGAAGGCGAAGATGATGAAGATGAGAATGAGGAACCATCAACCCAGAAGAAGCGTCGGATAGTTTGGTCCGAAGAGCTGCACAAAAAGTTTCTTGACGTTTTCTATTATCTGGGACCGGAAAAGGCTGTACCAAAGAAAATTCTTGAGCTGATGAATGTTGAAGATCTCTCAAGGGGTAATGTGGCCAGCCATCTGCAGAAGTTTAGGGAACAACTTAAAAAAGGCGGCAGTAAGAAGGAAAAGCAGAGAGCTACCATGGTTGTTGATCTGGGGAGAAAAGATTCTTCTTACACGCTGCACACGGGTCCAGTTGATGAATCTGGAGGGAGGCTTTCAAATCCTGCTCCCTTATCCTCATACATACCTCCGCAGATGCTTTCGAGATCAAACTCCCCCACTGATTTTAACATGCCAAGAATTAATCCTTCTTCTCATCTGCTGCGACCTGGTCAGTCCCAAAATTTGTGCAACTCTATCAATACTGTAGCAAACCTCCAGCCAAGTGTGCTTACAAACCAAAGCCGAAACCTTTTTCAAGTATCTCAGGCACCAGTAGAGCAAAATCAATTGCAGCAGAAAAATTCTACCATTGACATCCGACAGTCCACTCCCAATAATAATGGTTCCACAAGTACTTTTCCATATAAAGGATTGCCTGGCAGCTCAGTCGGTTATGATTGTAATACTTCAATGTTACAAGGCAATCCACAGCAAAAACATGGGACGCTAGAGTTTGGAAATCAGTCTTCTCTTAGAGTGAATTCATTGAATCCCAAATCATTTGACAATTCCCTTTGTAGATCATCCAATTTTCTGGATAACGATGGATATGGTGAAAGTTGGCAGGGTGGTATGCAGGGTTGTGGTCAATTATACCAATTTCCATCAACTTCTTTGCTCAGGAGTGAGGCTTCCAATTTTGGTCAATTTCCTGCTAATAACTTGGGTGTTTCTTCAAGTACACCTCAGATCGGGAACACTCCAAATGACTTCTCTTCTTTAAGTGCACTTTCAGCTTCTGTGGAGGAACCAAGAGAAAACATACATATAAAAAACCAAGGCTATGCTGTACCAACCATGTATTGCACGCCAAATCAATGGTGGGAAGATCATAAGCAAGATTACAACCACAACTGGAACCTTTCTTCCATCGTTTCTAGCAATGGTGTTGTAGATCCACTAAGCCTAACCTTGGACCAAAATGATGCAGTTTGCAGTAGAAGCATAAATTCATCTTTGTTTGACCAGTTTAATGGGGGAAATAGAACTATCGTACAGCGCCTTGAGGTTGAGAATTCGACCATGCATACAAAGATTGATCCTAATGAGGATCACATATTATTAGAGCAAGCAAAGTCCAATGATGGCTTGGTTCAAAATAGTCTTGAATCACTGGATAACCAGATTGAATTGGAGAATGATTTTGATTTACTGGACGGAGAGTTTGGATTTGATGCAATACAGGAACAAAAGAAGAATGACGAGTATGATTTACTGGATGGAGGGTTTCGATTTGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

702

Amino Acids

78.56

Weight (kDa)

5.2

Isoelectric Point (pI)

48.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	27 - 133	3.9e-23	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1132
AccIII	TCCGGA	2 cut(s)	64, 423
AciI	CCGC	4 cut(s)	86, 159, 810, 953
AclWI	GGATC	5 cut(s)	63, 456, 1754, 1898, 1923
AcoI	YGGCCR	1 cut(s)	768
AcsI	RAATTY	8 cut(s)	113, 186, 723, 1045, 1165, 1345, 1813, 1879
AfaI	GTAC	6 cut(s)	234, 714, 1219, 1546, 1656, 1860
AfiI	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
AflIII	ACRYGT	1 cut(s)	415
AjnI	CCWGG	4 cut(s)	81, 216, 1030, 1240
AloI	GAACNNNNNNTCC	2 cut(s)	1715, 1747
AluBI	AGCT	9 cut(s)	262, 271, 331, 661, 733, 836, 1248, 1601, 2105
AluI	AGCT	9 cut(s)	262, 271, 331, 661, 733, 836, 1248, 1601, 2105
Alw21I	GWGCWC	1 cut(s)	1594
Alw44I	GTGCAC	1 cut(s)	1590
AlwI	GGATC	5 cut(s)	63, 456, 1754, 1898, 1923
AlwNI	CAGNNNCTG	1 cut(s)	1604
Aor13HI	TCCGGA	2 cut(s)	64, 423
AoxI	GGCC	1 cut(s)	768
ApaLI	GTGCAC	1 cut(s)	1590
ApeKI	GCWGC	7 cut(s)	130, 518, 661, 880, 1024, 1156, 1245
ApoI	RAATTY	8 cut(s)	113, 186, 723, 1045, 1165, 1345, 1813, 1879
ArsI	GACNNNNNNTTYG	2 cut(s)	2012, 2044
AseI	ATTAAT	1 cut(s)	1005
Asp700I	GAANNNNTTC	1 cut(s)	865
AspLEI	GCGC	1 cut(s)	1866
AspS9I	GGNCC	6 cut(s)	13, 289, 651, 698, 890, 1780
AsuHPI	GGTGA	4 cut(s)	47, 332, 385, 1430
AvaII	GGWCC	6 cut(s)	13, 289, 651, 698, 890, 1780
BaeGI	GKGCMC	2 cut(s)	282, 1594
BalI	TGGCCA	1 cut(s)	770
BanI	GGYRCC	1 cut(s)	1132
BbsI	GAAGAC	2 cut(s)	412, 1323
Bbv12I	GWGCWC	1 cut(s)	1594
BbvI	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
BccI	CCATC	9 cut(s)	62, 245, 628, 783, 1403, 1477, 1742, 1943, 2078
BcgI	CGANNNNNNTGC	2 cut(s)	1234, 1268
BciT130I	CCWGG	4 cut(s)	83, 218, 1032, 1242
BclI	TGATCA	1 cut(s)	37
BfaI	CTAG	2 cut(s)	1313, 1743
BfmI	CTRYAG	2 cut(s)	779, 1068
BfoI	RGCGCY	1 cut(s)	1867
BglII	AGATCT	1 cut(s)	748
BisI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
BlsI	GCNGC	8 cut(s)	132, 520, 663, 812, 882, 1026, 1158, 1247
BmcAI	AGTACT	1 cut(s)	1219
Bme1390I	CCNGG	4 cut(s)	83, 218, 1032, 1242
Bme18I	GGWCC	6 cut(s)	13, 289, 651, 698, 890, 1780
BmgT120I	GGNCC	6 cut(s)	13, 289, 651, 698, 890, 1780
BmiI	GGNNCC	7 cut(s)	618, 699, 891, 1134, 1210, 1614, 1724
BmrFI	CCNGG	4 cut(s)	83, 218, 1032, 1242
BmrI	ACTGGG	1 cut(s)	29
BmsI	GCATC	4 cut(s)	228, 948, 1780, 2029
BmuI	ACTGGG	1 cut(s)	29
BpiI	GAAGAC	2 cut(s)	412, 1323
BpmI	CTGGAG	2 cut(s)	927, 1064
Bpu10I	CCTNAGC	1 cut(s)	1484
BpuEI	CTTGAG	3 cut(s)	739, 749, 1889
BsaBI	GATNNNNATC	1 cut(s)	54
BsaJI	CCNNGG	4 cut(s)	352, 840, 1642, 1776
BsaWI	WCCGGW	3 cut(s)	64, 423, 700
BsaXI	ACNNNNNCTCC	2 cut(s)	15, 45
Bsc4I	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
Bse1I	ACTGG	8 cut(s)	24, 893, 1136, 1724, 1831, 1983, 2022, 2085
Bse3DI	GCAATG	2 cut(s)	322, 1753
Bse8I	GATNNNNATC	1 cut(s)	54
BseAI	TCCGGA	2 cut(s)	64, 423
BseBI	CCWGG	4 cut(s)	83, 218, 1032, 1242
BseDI	CCNNGG	4 cut(s)	352, 840, 1642, 1776
BseGI	GGATG	7 cut(s)	10, 73, 256, 516, 1179, 1388, 2089
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
BseMI	GCAATG	2 cut(s)	322, 1753
BseMII	CTCAG	5 cut(s)	318, 1142, 1263, 1498, 1565
BseNI	ACTGG	8 cut(s)	24, 893, 1136, 1724, 1831, 1983, 2022, 2085
BseSI	GKGCMC	2 cut(s)	282, 1594
BseXI	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
BsgI	GTGCAG	2 cut(s)	647, 866
BshFI	GGCC	1 cut(s)	770
BshNI	GGYRCC	1 cut(s)	1132
BsiHKAI	GWGCWC	1 cut(s)	1594
BsiSI	CCGG	3 cut(s)	65, 424, 701
BslFI	GGGAC	3 cut(s)	711, 1024, 1321
BslI	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
BsmFI	GGGAC	3 cut(s)	711, 1024, 1321
BsnI	GGCC	1 cut(s)	770
Bsp1286I	GDGCHC	2 cut(s)	282, 1594
Bsp13I	TCCGGA	2 cut(s)	64, 423
Bsp1407I	TGTACA	1 cut(s)	232
Bsp19I	CCATGG	2 cut(s)	352, 840
BspACI	CCGC	4 cut(s)	86, 159, 810, 953
BspANI	GGCC	1 cut(s)	770
BspCNI	CTCAG	5 cut(s)	319, 1141, 1262, 1497, 1564
BspEI	TCCGGA	2 cut(s)	64, 423
BspLI	GGNNCC	7 cut(s)	618, 699, 891, 1134, 1210, 1614, 1724
BspMAI	CTGCAG	1 cut(s)	783
BspPI	GGATC	5 cut(s)	63, 456, 1754, 1898, 1923
BspQI	GCTCTTC	1 cut(s)	651
BspT107I	GGYRCC	1 cut(s)	1132
BsrDI	GCAATG	2 cut(s)	322, 1753
BsrGI	TGTACA	1 cut(s)	232
BsrI	ACTGG	8 cut(s)	24, 893, 1136, 1724, 1831, 1983, 2022, 2085
BssECI	CCNNGG	4 cut(s)	352, 840, 1642, 1776
BssT1I	CCWWGG	4 cut(s)	352, 840, 1642, 1776
Bst2UI	CCWGG	4 cut(s)	83, 218, 1032, 1242
Bst4CI	ACNGT	2 cut(s)	1069, 1188
Bst6I	CTCTTC	2 cut(s)	651, 1585
BstAUI	TGTACA	1 cut(s)	232
BstC8I	GCNNGC	3 cut(s)	772, 1673, 1935
BstDSI	CCRYGG	2 cut(s)	352, 840
BstF5I	GGATG	7 cut(s)	10, 73, 256, 516, 1179, 1388, 2089
BstH2I	RGCGCY	1 cut(s)	1867
BstHHI	GCGC	1 cut(s)	1866
BstMWI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 1090, 1598, 1806
BstNI	CCWGG	4 cut(s)	83, 218, 1032, 1242
BstNSI	RCATGY	2 cut(s)	419, 997
BstSCI	CCNGG	4 cut(s)	81, 216, 1030, 1240
BstSFI	CTRYAG	2 cut(s)	779, 1068
BstSLI	GKGCMC	2 cut(s)	282, 1594
BstV1I	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
BstV2I	GAAGAC	2 cut(s)	412, 1323
BstX2I	RGATCY	2 cut(s)	748, 1759
BstXI	CCANNNNNNTGG	3 cut(s)	1399, 1683, 1838
BstYI	RGATCY	2 cut(s)	748, 1759
BsuRI	GGCC	1 cut(s)	770
BtgI	CCRYGG	2 cut(s)	352, 840
BtsCI	GGATG	7 cut(s)	10, 73, 256, 516, 1179, 1388, 2089
BtsIMutI	CAGTG	3 cut(s)	232, 981, 1976
Cac8I	GCNNGC	3 cut(s)	772, 1673, 1935
CaiI	CAGNNNCTG	1 cut(s)	1604
CfoI	GCGC	1 cut(s)	1866
Cfr13I	GGNCC	6 cut(s)	13, 289, 651, 698, 890, 1780
CseI	GACGC	2 cut(s)	626, 1318
CsiI	ACCWGGT	2 cut(s)	216, 1030
Csp6I	GTAC	6 cut(s)	233, 713, 1218, 1545, 1655, 1859
CviAII	CATG	9 cut(s)	167, 304, 353, 416, 841, 994, 1304, 1663, 1888
CviQI	GTAC	6 cut(s)	233, 713, 1218, 1545, 1655, 1859
EaeI	YGGCCR	1 cut(s)	768
Eam1104I	CTCTTC	2 cut(s)	651, 1585
EarI	CTCTTC	2 cut(s)	651, 1585
Eco130I	CCWWGG	4 cut(s)	352, 840, 1642, 1776
Eco47I	GGWCC	6 cut(s)	13, 289, 651, 698, 890, 1780
EcoRI	GAATTC	2 cut(s)	1345, 1879
EcoRII	CCWGG	4 cut(s)	81, 216, 1030, 1240
EcoT14I	CCWWGG	4 cut(s)	352, 840, 1642, 1776
EcoT22I	ATGCAT	2 cut(s)	172, 1893
ErhI	CCWWGG	4 cut(s)	352, 840, 1642, 1776
FaeI	CATG	9 cut(s)	170, 307, 356, 419, 844, 997, 1307, 1666, 1891
FaqI	GGGAC	3 cut(s)	711, 1024, 1321
FatI	CATG	9 cut(s)	166, 303, 352, 415, 840, 993, 1303, 1662, 1887
FbaI	TGATCA	1 cut(s)	37
Fnu4HI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
FokI	GGATG	7 cut(s)	17, 80, 263, 523, 1166, 1375, 2096
Fsp4HI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
FspBI	CTAG	2 cut(s)	1313, 1743
GlaI	GCGC	1 cut(s)	1865
GluI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
GsuI	CTGGAG	2 cut(s)	927, 1064
HaeII	RGCGCY	1 cut(s)	1867
HaeIII	GGCC	1 cut(s)	770
HapII	CCGG	3 cut(s)	65, 424, 701
HgaI	GACGC	2 cut(s)	626, 1318
HhaI	GCGC	1 cut(s)	1866
Hin1II	CATG	9 cut(s)	170, 307, 356, 419, 844, 997, 1307, 1666, 1891
Hin6I	GCGC	1 cut(s)	1864
HinP1I	GCGC	1 cut(s)	1864
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HindIII	AAGCTT	1 cut(s)	2103
HinfI	GANTC	5 cut(s)	345, 866, 902, 1354, 1973
HpaI	GTTAAC	1 cut(s)	385
HpaII	CCGG	3 cut(s)	65, 424, 701
HphI	GGTGA	4 cut(s)	47, 332, 385, 1430
Hpy166II	GTNNAC	4 cut(s)	385, 1191, 1547, 1592
Hpy188I	TCNGA	6 cut(s)	42, 532, 642, 655, 1184, 1554
Hpy8I	GTNNAC	4 cut(s)	385, 1191, 1547, 1592
Hpy99I	CGWCG	1 cut(s)	642
HpyAV	CCTTC	6 cut(s)	4, 334, 500, 581, 814, 1020
HpyCH4III	ACNGT	2 cut(s)	1069, 1188
HpyCH4IV	ACGT	1 cut(s)	681
HpyF10VI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 1090, 1598, 1806
HpySE526I	ACGT	1 cut(s)	681
Hsp92II	CATG	9 cut(s)	170, 307, 356, 419, 844, 997, 1307, 1666, 1891
HspAI	GCGC	1 cut(s)	1864
Kpn2I	TCCGGA	2 cut(s)	64, 423
Ksp22I	TGATCA	1 cut(s)	37
KspAI	GTTAAC	1 cut(s)	385
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	2 cut(s)	267, 934
Lsp1109I	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
LweI	GCATC	4 cut(s)	228, 948, 1780, 2029
MabI	ACCWGGT	2 cut(s)	216, 1030
MaeI	CTAG	2 cut(s)	1313, 1743
MaeII	ACGT	1 cut(s)	681
MaeIII	GTNAC	2 cut(s)	151, 1278
MfeI	CAATTG	1 cut(s)	1151
MflI	RGATCY	2 cut(s)	748, 1759
MhlI	GDGCHC	2 cut(s)	282, 1594
MlsI	TGGCCA	1 cut(s)	770
MluNI	TGGCCA	1 cut(s)	770
MmeI	TCCRAC	2 cut(s)	620, 1207
Mox20I	TGGCCA	1 cut(s)	770
Mph1103I	ATGCAT	2 cut(s)	172, 1893
MroI	TCCGGA	2 cut(s)	64, 423
MroXI	GAANNNNTTC	1 cut(s)	865
MscI	TGGCCA	1 cut(s)	770
MseI	TTAA	6 cut(s)	384, 801, 990, 1005, 1586, 1836
MslI	CAYNNNNRTG	1 cut(s)	392
Msp20I	TGGCCA	1 cut(s)	770
MspI	CCGG	3 cut(s)	65, 424, 701
MspR9I	CCNGG	4 cut(s)	83, 218, 1032, 1242
MunI	CAATTG	1 cut(s)	1151
MvaI	CCWGG	4 cut(s)	83, 218, 1032, 1242
MwoI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 1090, 1598, 1806
NcoI	CCATGG	2 cut(s)	352, 840
NlaIII	CATG	9 cut(s)	170, 307, 356, 419, 844, 997, 1307, 1666, 1891
NlaIV	GGNNCC	7 cut(s)	618, 699, 891, 1134, 1210, 1614, 1724
NsiI	ATGCAT	2 cut(s)	172, 1893
NspI	RCATGY	2 cut(s)	419, 997
PciI	ACATGT	1 cut(s)	415
PciSI	GCTCTTC	1 cut(s)	651
PdmI	GAANNNNTTC	1 cut(s)	865
PfeI	GAWTC	5 cut(s)	345, 866, 902, 1354, 1973
PflFI	GACNNNGTC	2 cut(s)	476, 1032
PkrI	GCNGC	8 cut(s)	132, 520, 663, 812, 882, 1026, 1158, 1247
PscI	ACATGT	1 cut(s)	415
PshBI	ATTAAT	1 cut(s)	1005
Psp6I	CCWGG	4 cut(s)	81, 216, 1030, 1240
PspGI	CCWGG	4 cut(s)	81, 216, 1030, 1240
PspN4I	GGNNCC	7 cut(s)	618, 699, 891, 1134, 1210, 1614, 1724
PspPI	GGNCC	6 cut(s)	13, 289, 651, 698, 890, 1780
PstI	CTGCAG	1 cut(s)	783
PstNI	CAGNNNCTG	1 cut(s)	1604
PsuI	RGATCY	2 cut(s)	748, 1759
PsyI	GACNNNGTC	2 cut(s)	476, 1032
RsaI	GTAC	6 cut(s)	234, 714, 1219, 1546, 1656, 1860
RsaNI	GTAC	6 cut(s)	233, 713, 1218, 1545, 1655, 1859
RseI	CAYNNNNRTG	1 cut(s)	392
SapI	GCTCTTC	1 cut(s)	651
SaqAI	TTAA	6 cut(s)	384, 801, 990, 1005, 1586, 1836
SatI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
Sau96I	GGNCC	6 cut(s)	13, 289, 651, 698, 890, 1780
ScaI	AGTACT	1 cut(s)	1219
ScrFI	CCNGG	4 cut(s)	83, 218, 1032, 1242
SduI	GDGCHC	2 cut(s)	282, 1594
SexAI	ACCWGGT	2 cut(s)	216, 1030
SfaNI	GCATC	4 cut(s)	228, 948, 1780, 2029
SfcI	CTRYAG	2 cut(s)	779, 1068
SinI	GGWCC	6 cut(s)	13, 289, 651, 698, 890, 1780
SmiMI	CAYNNNNRTG	1 cut(s)	392
SmlI	CTYRAG	3 cut(s)	728, 754, 1868
SmoI	CTYRAG	3 cut(s)	728, 754, 1868
SsiI	CCGC	4 cut(s)	86, 159, 810, 953
SspMI	CTAG	2 cut(s)	1313, 1743
StyD4I	CCNGG	4 cut(s)	81, 216, 1030, 1240
StyI	CCWWGG	4 cut(s)	352, 840, 1642, 1776
TaaI	ACNGT	2 cut(s)	1069, 1188
TaiI	ACGT	1 cut(s)	684
TaqI	TCGA	3 cut(s)	965, 1883, 2095
TatI	WGTACW	3 cut(s)	232, 1217, 1544
TauI	GCSGC	1 cut(s)	813
TfiI	GAWTC	5 cut(s)	345, 866, 902, 1354, 1973
Tru1I	TTAA	6 cut(s)	384, 801, 990, 1005, 1586, 1836
Tru9I	TTAA	6 cut(s)	384, 801, 990, 1005, 1586, 1836
TscAI	CASTG	3 cut(s)	232, 988, 1983
TseI	GCWGC	7 cut(s)	130, 518, 661, 880, 1024, 1156, 1245
TspDTI	ATGAA	7 cut(s)	350, 597, 615, 752, 915, 1338, 1806
TspGWI	ACGGA	1 cut(s)	2037
TspRI	CASTG	3 cut(s)	232, 988, 1983
Tth111I	GACNNNGTC	2 cut(s)	476, 1032
VneI	GTGCAC	1 cut(s)	1590
VpaK11BI	GGWCC	6 cut(s)	13, 289, 651, 698, 890, 1780
VspI	ATTAAT	1 cut(s)	1005
XapI	RAATTY	8 cut(s)	113, 186, 723, 1045, 1165, 1345, 1813, 1879
XceI	RCATGY	2 cut(s)	419, 997
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1683, 1951
XmnI	GAANNNNTTC	1 cut(s)	865
XspI	CTAG	2 cut(s)	1313, 1743
ZrmI	AGTACT	1 cut(s)	1219
Zsp2I	ATGCAT	2 cut(s)	172, 1893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.