Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Forward (+)

48475210 .. 48478518

Gene Structure 3309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G029870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGATGCGAAGGACCAACTGGGAGGTTCTGTTGGTGATCAGAATGGGGATATGGATCGGTTTCCGGATGGTATGCGTGTCCTGGCGGTTGATGACGACCTAACTTATCTCAAATTCTTGGAGGCTACGCTGCGTAAATGCAATTATGAGGTAACTACCGCTAATCATGCATACGAGGCACTCCAAATTTTGAGGGAAAACAGAAACAAGTTTGACCTGGTAATCAGTGATGTACAGATGCCAGATATGGATGGCTTTCAGCTCCTAAAGCTCTTAGGGCACGAAATGGACCTACCTGTAATCATGGTGTCAGGCAATGGTGATACCGAGCTTATGAAGAAGGGAATCTCCCATGGCGCTTGTTGCTATTTGGTGAAACCTGTTAACATTGAAGTGTTCAAGACTATTTGGCAACATGTCTTCCGGAGAAAAAAGTTGAACTCTAAGGATCAATGTAAGTCTTGCGATCAAGACAAGGTCTGCAAAGGAACAGGAGAAGGTGAAGAAGGGATGTCAGCAGCAAGTAGTTCAGATAAGAATGGAAAACACAAAAGAAAAAGGAAGCACCAAAATGAAGATGATGAAGAAGGCGAAGATGATGAAGATGAGAATGAGGAACCATCAACCCAGAAGAAGCGTCGGATAGTTTGGTCCGAAGAGCTGCACAAAAAGTTTCTTGACGTTTTCTATTATCTGGGACCTGAAAAGGCTGTACCAAAGAAAATTCTTGAGCTGATGAATGTTGAAGATCTCTCAAGGGGTAATGTGGCCAGCCATCTGCAGAAGTTTAGGGAACAACTTAAAAAAGGCGGCAGTAAGAAGGAAAAGCAGAGAGCTAGCATGGTTGTTGATCTGGGGAGAAACGATTCTTCTTACACGCTGCACACGGGTCCAGTTGATGAATCTGGAGGGAGGCTCTCAAATCCTGCTCCCTTATCCTCATACATACCTCCGCAGATGCTTTCGAGATCAAACTCCCCCACTGATTTTAACATGCCAAGAATTAATCCTTCTTCTCATCTGCTGCGACCTGGTCAGTCCCAAAATTTATGCAACCCTATCAATAGTGTAGCAAACCTCCAGCCAAGTGTGCTTACAAACCAAAGCCGAAACCTTTTTCAAGTATCTCAGGCACCAGTAGAGCAAAATCAATTGCAGCAGAAAAATTTTACCATTGACATCCGACAGTCCACTCCCAATAATAATGGTTCCACAAGTACTTTTCCATATAAAGGATTGCCTGGCAGCTCAGTTGGTTATGACTGTAATACTTCAATGTTACAAGGCAATCCACAGCAAAAACATGGGACGCTAGAGTTTGGAAATCAGTCTTCTCTTAGAGTGAATTCATTGAATCCCAAATCATTTGACAATGCCCTTTGTAGATCGTCCAATTTTCTGGATAACGATGGATATGGTGAAAGTTGGCAGGGTGGTATGCAGGGTTGTGGTCAATTATACCAATTTCCATCAACTGCTTTGCTCAGGAGTGAGGCTTCCAATTTTGGTCAATTTCCTGCTAATAACTTGGGTGTTTCTTCAAGTACACCTCAGATCGGGAACACTCCAAATGACTTCTCTTCTGTAAGTGCACTTTCAGCTTCTGTGGACGAACCAAGAGAAAACATACATATAAAAAACCAAGGCCATGTTGTACCAACCATGTATTGCACGCCAAATCAATGGTGGGAAGATCATAAGCAAGATTACAACCACAACTGGAACCTTTCTTCCATCGTTTCTAGCAATGGTGTTGTAGATCCACTAAGCCGGACCTTGGACCAAAATGATGCAGTTTTCAGTAAAAGCATAAATTCATCTTTGTTTGACCAGTGTCATGGGGGAAATAGAACTATCGTACAGCGCCTTGAGGTTGAGAATTCGACCATGCATACAAAGATTGATCCTAATGAGGATTACATATTATTAGAGCAAGCAGAGTCCAATGATGGCTTGGTTCAAAATAGTCTTGAATCACTGGATAACCAGGTTGAATTGGAGAATGAGTTTGATTTAATGGACGGAGAGTTTGGATTTGATGCAATACAGGAACAAAAGAAGAATGACGAGTATGATTTACTGGATGGAGGGTTTCGATTTGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

702

Amino Acids

78.57

Weight (kDa)

5.13

Isoelectric Point (pI)

46.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	27 - 133	3.9e-23	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1132
AccIII	TCCGGA	2 cut(s)	64, 423
AciI	CCGC	4 cut(s)	86, 159, 810, 953
AclWI	GGATC	4 cut(s)	63, 456, 1754, 1898
AcoI	YGGCCR	1 cut(s)	768
AcsI	RAATTY	8 cut(s)	113, 186, 723, 1045, 1165, 1345, 1813, 1879
AfaI	GTAC	6 cut(s)	234, 714, 1219, 1546, 1656, 1860
AfiI	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
AflIII	ACRYGT	1 cut(s)	415
AjnI	CCWGG	5 cut(s)	81, 216, 1030, 1240, 1986
AloI	GAACNNNNNNTCC	2 cut(s)	1715, 1747
AluBI	AGCT	9 cut(s)	262, 271, 331, 661, 733, 836, 1248, 1601, 2105
AluI	AGCT	9 cut(s)	262, 271, 331, 661, 733, 836, 1248, 1601, 2105
Alw21I	GWGCWC	1 cut(s)	1594
Alw44I	GTGCAC	1 cut(s)	1590
AlwI	GGATC	4 cut(s)	63, 456, 1754, 1898
AlwNI	CAGNNNCTG	1 cut(s)	1604
Aor13HI	TCCGGA	2 cut(s)	64, 423
AoxI	GGCC	2 cut(s)	768, 1645
ApaLI	GTGCAC	1 cut(s)	1590
ApeKI	GCWGC	7 cut(s)	130, 518, 661, 880, 1024, 1156, 1245
ApoI	RAATTY	8 cut(s)	113, 186, 723, 1045, 1165, 1345, 1813, 1879
ArsI	GACNNNNNNTTYG	2 cut(s)	2012, 2044
AseI	ATTAAT	1 cut(s)	1005
Asp700I	GAANNNNTTC	1 cut(s)	865
AspLEI	GCGC	2 cut(s)	359, 1866
AspS9I	GGNCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
AsuHPI	GGTGA	5 cut(s)	47, 332, 385, 512, 1430
AsuNHI	GCTAGC	1 cut(s)	836
AvaII	GGWCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
BaeGI	GKGCMC	2 cut(s)	282, 1594
BalI	TGGCCA	1 cut(s)	770
BanI	GGYRCC	1 cut(s)	1132
BbsI	GAAGAC	2 cut(s)	412, 1323
Bbv12I	GWGCWC	1 cut(s)	1594
BbvI	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
BccI	CCATC	9 cut(s)	62, 245, 628, 783, 1403, 1477, 1742, 1943, 2078
BciT130I	CCWGG	5 cut(s)	83, 218, 1032, 1242, 1988
BclI	TGATCA	1 cut(s)	37
BfaI	CTAG	3 cut(s)	837, 1313, 1743
BfmI	CTRYAG	1 cut(s)	779
BfoI	RGCGCY	2 cut(s)	360, 1867
BglII	AGATCT	1 cut(s)	748
BisI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
BlsI	GCNGC	8 cut(s)	132, 520, 663, 812, 882, 1026, 1158, 1247
BmcAI	AGTACT	1 cut(s)	1219
Bme1390I	CCNGG	5 cut(s)	83, 218, 1032, 1242, 1988
Bme18I	GGWCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
BmgT120I	GGNCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
BmiI	GGNNCC	6 cut(s)	618, 699, 891, 1134, 1210, 1724
BmrFI	CCNGG	5 cut(s)	83, 218, 1032, 1242, 1988
BmrI	ACTGGG	1 cut(s)	29
BmsI	GCATC	4 cut(s)	228, 948, 1780, 2029
BmtI	GCTAGC	1 cut(s)	840
BmuI	ACTGGG	1 cut(s)	29
BoxI	GACNNNNGTC	1 cut(s)	1833
BpiI	GAAGAC	2 cut(s)	412, 1323
BplI	GAGNNNNNCTC	2 cut(s)	900, 932
BpmI	CTGGAG	2 cut(s)	927, 1064
Bpu10I	CCTNAGC	1 cut(s)	1484
BpuEI	CTTGAG	3 cut(s)	739, 749, 1889
BsaBI	GATNNNNATC	1 cut(s)	54
BsaJI	CCNNGG	3 cut(s)	352, 1642, 1776
BsaWI	WCCGGW	2 cut(s)	64, 423
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 1991, 2021
Bsc4I	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
Bse1I	ACTGG	7 cut(s)	24, 893, 1136, 1724, 1831, 1983, 2085
Bse3DI	GCAATG	2 cut(s)	322, 1753
Bse8I	GATNNNNATC	1 cut(s)	54
BseAI	TCCGGA	2 cut(s)	64, 423
BseBI	CCWGG	5 cut(s)	83, 218, 1032, 1242, 1988
BseDI	CCNNGG	3 cut(s)	352, 1642, 1776
BseGI	GGATG	6 cut(s)	10, 73, 256, 516, 1179, 2089
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
BseMI	GCAATG	2 cut(s)	322, 1753
BseMII	CTCAG	4 cut(s)	1142, 1263, 1498, 1565
BseNI	ACTGG	7 cut(s)	24, 893, 1136, 1724, 1831, 1983, 2085
BseSI	GKGCMC	2 cut(s)	282, 1594
BseXI	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
BsgI	GTGCAG	2 cut(s)	647, 866
BshFI	GGCC	2 cut(s)	770, 1647
BshNI	GGYRCC	1 cut(s)	1132
BsiHKAI	GWGCWC	1 cut(s)	1594
BsiSI	CCGG	3 cut(s)	65, 424, 1771
BslFI	GGGAC	3 cut(s)	711, 1024, 1321
BslI	CCNNNNNNNGG	3 cut(s)	1232, 1556, 1777
BsmFI	GGGAC	3 cut(s)	711, 1024, 1321
BsnI	GGCC	2 cut(s)	770, 1647
Bsp1286I	GDGCHC	2 cut(s)	282, 1594
Bsp13I	TCCGGA	2 cut(s)	64, 423
Bsp1407I	TGTACA	1 cut(s)	232
Bsp19I	CCATGG	1 cut(s)	352
BspACI	CCGC	4 cut(s)	86, 159, 810, 953
BspANI	GGCC	2 cut(s)	770, 1647
BspCNI	CTCAG	4 cut(s)	1141, 1262, 1497, 1564
BspEI	TCCGGA	2 cut(s)	64, 423
BspLI	GGNNCC	6 cut(s)	618, 699, 891, 1134, 1210, 1724
BspMAI	CTGCAG	1 cut(s)	783
BspOI	GCTAGC	1 cut(s)	840
BspPI	GGATC	4 cut(s)	63, 456, 1754, 1898
BspQI	GCTCTTC	1 cut(s)	651
BspT107I	GGYRCC	1 cut(s)	1132
BsrDI	GCAATG	2 cut(s)	322, 1753
BsrGI	TGTACA	1 cut(s)	232
BsrI	ACTGG	7 cut(s)	24, 893, 1136, 1724, 1831, 1983, 2085
BssECI	CCNNGG	3 cut(s)	352, 1642, 1776
BssT1I	CCWWGG	3 cut(s)	352, 1642, 1776
Bst2UI	CCWGG	5 cut(s)	83, 218, 1032, 1242, 1988
Bst4CI	ACNGT	2 cut(s)	1188, 1265
Bst6I	CTCTTC	2 cut(s)	651, 1585
BstAUI	TGTACA	1 cut(s)	232
BstC8I	GCNNGC	4 cut(s)	772, 838, 1673, 1935
BstDEI	CTNAG	9 cut(s)	274, 444, 1128, 1249, 1337, 1484, 1551, 1766, 2106
BstDSI	CCRYGG	1 cut(s)	352
BstF5I	GGATG	6 cut(s)	10, 73, 256, 516, 1179, 2089
BstH2I	RGCGCY	2 cut(s)	360, 1867
BstHHI	GCGC	2 cut(s)	359, 1866
BstMWI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 363, 1090, 1598
BstNI	CCWGG	5 cut(s)	83, 218, 1032, 1242, 1988
BstNSI	RCATGY	2 cut(s)	419, 997
BstPAI	GACNNNNGTC	1 cut(s)	1833
BstSCI	CCNGG	5 cut(s)	81, 216, 1030, 1240, 1986
BstSFI	CTRYAG	1 cut(s)	779
BstSLI	GKGCMC	2 cut(s)	282, 1594
BstV1I	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
BstV2I	GAAGAC	2 cut(s)	412, 1323
BstX2I	RGATCY	2 cut(s)	748, 1759
BstXI	CCANNNNNNTGG	3 cut(s)	1399, 1683, 1838
BstYI	RGATCY	2 cut(s)	748, 1759
BsuRI	GGCC	2 cut(s)	770, 1647
BtgI	CCRYGG	1 cut(s)	352
BtsCI	GGATG	6 cut(s)	10, 73, 256, 516, 1179, 2089
BtsIMutI	CAGTG	4 cut(s)	232, 981, 1838, 1976
Cac8I	GCNNGC	4 cut(s)	772, 838, 1673, 1935
CaiI	CAGNNNCTG	1 cut(s)	1604
CfoI	GCGC	2 cut(s)	359, 1866
Cfr13I	GGNCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
CseI	GACGC	2 cut(s)	626, 1318
CsiI	ACCWGGT	3 cut(s)	216, 1030, 1986
Csp6I	GTAC	6 cut(s)	233, 713, 1218, 1545, 1655, 1859
CviQI	GTAC	6 cut(s)	233, 713, 1218, 1545, 1655, 1859
DdeI	CTNAG	9 cut(s)	274, 444, 1128, 1249, 1337, 1484, 1551, 1766, 2106
EaeI	YGGCCR	1 cut(s)	768
Eam1104I	CTCTTC	2 cut(s)	651, 1585
EarI	CTCTTC	2 cut(s)	651, 1585
Eco130I	CCWWGG	3 cut(s)	352, 1642, 1776
Eco47I	GGWCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
EcoO109I	RGGNCCY	1 cut(s)	698
EcoRI	GAATTC	2 cut(s)	1345, 1879
EcoRII	CCWGG	5 cut(s)	81, 216, 1030, 1240, 1986
EcoT14I	CCWWGG	3 cut(s)	352, 1642, 1776
EcoT22I	ATGCAT	2 cut(s)	172, 1893
ErhI	CCWWGG	3 cut(s)	352, 1642, 1776
FaqI	GGGAC	3 cut(s)	711, 1024, 1321
FbaI	TGATCA	1 cut(s)	37
Fnu4HI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
FokI	GGATG	6 cut(s)	17, 80, 263, 523, 1166, 2096
Fsp4HI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
FspBI	CTAG	3 cut(s)	837, 1313, 1743
GlaI	GCGC	2 cut(s)	358, 1865
GluI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
GsuI	CTGGAG	2 cut(s)	927, 1064
HaeII	RGCGCY	2 cut(s)	360, 1867
HaeIII	GGCC	2 cut(s)	770, 1647
HapII	CCGG	3 cut(s)	65, 424, 1771
HgaI	GACGC	2 cut(s)	626, 1318
HhaI	GCGC	2 cut(s)	359, 1866
Hin6I	GCGC	2 cut(s)	357, 1864
HinP1I	GCGC	2 cut(s)	357, 1864
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HindIII	AAGCTT	1 cut(s)	2103
HinfI	GANTC	6 cut(s)	345, 866, 902, 1354, 1940, 1973
HpaI	GTTAAC	1 cut(s)	385
HpaII	CCGG	3 cut(s)	65, 424, 1771
HphI	GGTGA	5 cut(s)	47, 332, 385, 512, 1430
Hpy166II	GTNNAC	5 cut(s)	385, 1191, 1547, 1592, 1609
Hpy188I	TCNGA	6 cut(s)	42, 532, 642, 655, 1184, 1554
Hpy8I	GTNNAC	5 cut(s)	385, 1191, 1547, 1592, 1609
Hpy99I	CGWCG	1 cut(s)	642
HpyAV	CCTTC	7 cut(s)	4, 334, 491, 500, 581, 814, 1020
HpyCH4III	ACNGT	2 cut(s)	1188, 1265
HpyCH4IV	ACGT	1 cut(s)	681
HpyF10VI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 363, 1090, 1598
HpyF3I	CTNAG	9 cut(s)	274, 444, 1128, 1249, 1337, 1484, 1551, 1766, 2106
HpySE526I	ACGT	1 cut(s)	681
HspAI	GCGC	2 cut(s)	357, 1864
Kpn2I	TCCGGA	2 cut(s)	64, 423
Ksp22I	TGATCA	1 cut(s)	37
KspAI	GTTAAC	1 cut(s)	385
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	2 cut(s)	267, 934
Lsp1109I	GCAGC	7 cut(s)	117, 530, 648, 867, 1011, 1168, 1257
LweI	GCATC	4 cut(s)	228, 948, 1780, 2029
MabI	ACCWGGT	3 cut(s)	216, 1030, 1986
MaeI	CTAG	3 cut(s)	837, 1313, 1743
MaeII	ACGT	1 cut(s)	681
MaeIII	GTNAC	2 cut(s)	151, 1278
MfeI	CAATTG	1 cut(s)	1151
MflI	RGATCY	2 cut(s)	748, 1759
MhlI	GDGCHC	2 cut(s)	282, 1594
MlsI	TGGCCA	1 cut(s)	770
MluNI	TGGCCA	1 cut(s)	770
MlyI	GAGTC	1 cut(s)	1949
MmeI	TCCRAC	2 cut(s)	620, 1207
Mox20I	TGGCCA	1 cut(s)	770
Mph1103I	ATGCAT	2 cut(s)	172, 1893
MroI	TCCGGA	2 cut(s)	64, 423
MroXI	GAANNNNTTC	1 cut(s)	865
MscI	TGGCCA	1 cut(s)	770
MseI	TTAA	5 cut(s)	384, 801, 990, 1005, 2015
MslI	CAYNNNNRTG	2 cut(s)	392, 570
Msp20I	TGGCCA	1 cut(s)	770
MspI	CCGG	3 cut(s)	65, 424, 1771
MspR9I	CCNGG	5 cut(s)	83, 218, 1032, 1242, 1988
MunI	CAATTG	1 cut(s)	1151
MvaI	CCWGG	5 cut(s)	83, 218, 1032, 1242, 1988
MwoI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 363, 1090, 1598
NcoI	CCATGG	1 cut(s)	352
NheI	GCTAGC	1 cut(s)	836
NlaIV	GGNNCC	6 cut(s)	618, 699, 891, 1134, 1210, 1724
NsiI	ATGCAT	2 cut(s)	172, 1893
NspI	RCATGY	2 cut(s)	419, 997
PciI	ACATGT	1 cut(s)	415
PciSI	GCTCTTC	1 cut(s)	651
PdmI	GAANNNNTTC	1 cut(s)	865
PfeI	GAWTC	5 cut(s)	345, 866, 902, 1354, 1973
PflFI	GACNNNGTC	2 cut(s)	476, 1032
PkrI	GCNGC	8 cut(s)	132, 520, 663, 812, 882, 1026, 1158, 1247
PleI	GAGTC	1 cut(s)	1948
PpsI	GAGTC	1 cut(s)	1948
PpuMI	RGGWCCY	1 cut(s)	698
PscI	ACATGT	1 cut(s)	415
PshAI	GACNNNNGTC	1 cut(s)	1833
PshBI	ATTAAT	1 cut(s)	1005
Psp5II	RGGWCCY	1 cut(s)	698
Psp6I	CCWGG	5 cut(s)	81, 216, 1030, 1240, 1986
PspGI	CCWGG	5 cut(s)	81, 216, 1030, 1240, 1986
PspN4I	GGNNCC	6 cut(s)	618, 699, 891, 1134, 1210, 1724
PspPI	GGNCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
PspPPI	RGGWCCY	1 cut(s)	698
PstI	CTGCAG	1 cut(s)	783
PstNI	CAGNNNCTG	1 cut(s)	1604
PsuI	RGATCY	2 cut(s)	748, 1759
PsyI	GACNNNGTC	2 cut(s)	476, 1032
RsaI	GTAC	6 cut(s)	234, 714, 1219, 1546, 1656, 1860
RsaNI	GTAC	6 cut(s)	233, 713, 1218, 1545, 1655, 1859
RseI	CAYNNNNRTG	2 cut(s)	392, 570
SapI	GCTCTTC	1 cut(s)	651
SaqAI	TTAA	5 cut(s)	384, 801, 990, 1005, 2015
SatI	GCNGC	8 cut(s)	131, 519, 662, 811, 881, 1025, 1157, 1246
Sau96I	GGNCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
ScaI	AGTACT	1 cut(s)	1219
SchI	GAGTC	1 cut(s)	1949
ScrFI	CCNGG	5 cut(s)	83, 218, 1032, 1242, 1988
SduI	GDGCHC	2 cut(s)	282, 1594
SexAI	ACCWGGT	3 cut(s)	216, 1030, 1986
SfaNI	GCATC	4 cut(s)	228, 948, 1780, 2029
SfcI	CTRYAG	1 cut(s)	779
SinI	GGWCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
SmiMI	CAYNNNNRTG	2 cut(s)	392, 570
SmlI	CTYRAG	3 cut(s)	728, 754, 1868
SmoI	CTYRAG	3 cut(s)	728, 754, 1868
SsiI	CCGC	4 cut(s)	86, 159, 810, 953
SspMI	CTAG	3 cut(s)	837, 1313, 1743
StyD4I	CCNGG	5 cut(s)	81, 216, 1030, 1240, 1986
StyI	CCWWGG	3 cut(s)	352, 1642, 1776
TaaI	ACNGT	2 cut(s)	1188, 1265
TaiI	ACGT	1 cut(s)	684
TaqI	TCGA	3 cut(s)	965, 1883, 2095
TatI	WGTACW	3 cut(s)	232, 1217, 1544
TauI	GCSGC	1 cut(s)	813
TfiI	GAWTC	5 cut(s)	345, 866, 902, 1354, 1973
Tru1I	TTAA	5 cut(s)	384, 801, 990, 1005, 2015
Tru9I	TTAA	5 cut(s)	384, 801, 990, 1005, 2015
TscAI	CASTG	4 cut(s)	232, 988, 1838, 1983
TseI	GCWGC	7 cut(s)	130, 518, 661, 880, 1024, 1156, 1245
TspDTI	ATGAA	8 cut(s)	350, 588, 597, 615, 752, 915, 1338, 1806
TspGWI	ACGGA	1 cut(s)	2037
TspRI	CASTG	4 cut(s)	232, 988, 1838, 1983
Tth111I	GACNNNGTC	2 cut(s)	476, 1032
VneI	GTGCAC	1 cut(s)	1590
VpaK11BI	GGWCC	7 cut(s)	13, 289, 651, 698, 890, 1773, 1780
VspI	ATTAAT	1 cut(s)	1005
XapI	RAATTY	8 cut(s)	113, 186, 723, 1045, 1165, 1345, 1813, 1879
XceI	RCATGY	2 cut(s)	419, 997
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1683, 1951
XmnI	GAANNNNTTC	1 cut(s)	865
XspI	CTAG	3 cut(s)	837, 1313, 1743
ZrmI	AGTACT	1 cut(s)	1219
Zsp2I	ATGCAT	2 cut(s)	172, 1893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.