Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Reverse (-)

35258559 .. 35261868

Gene Structure 3310 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00110780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGATGCGAAGGACCAACTGGGAGGTTCTGTTGGTGATCAGAATGGGGATATGGATCGGTTTCCGGATGGTATGCGTGTCCTGGCGGTTGATGACGACCTAACTTATCTCAAATTCTTGGAGGCTACGCTGCGTAAATGCAATTATGAGGTAACTACCGCTAATCATGCATACGAGGCACTCCAAATTTTGAGGGAAAACAGAAACAAGTTTGACCTGGTAATCAGTGATGTACAGATGCCAGATATGGATGGCTTTCAGCTCCTAAAGCTCTTAGGGCACGAAATGGACCTACCTGTAATCAGCGATAAATTAATTACCAACTCTAATCACTTTTATGTATTAAAATGGCTGGTTTCAGTGGTGTCAGGCAATGGTGATACTGAGCTTATGAAGAAGGGAATCTCCCATGGTGCTTGTTGCTATTTGGTGAAACCTGTTAACATTGAAGTGTTCAAGACTATTTGGCAACATGTCTTCCGGAGAAAAAAGTTGAACTCTAAGGATCAATCTAAGTCTTGTGATCAAGACAAGGTCTGCAAAGGAACAGGAGAAGGTGAAGAAGGGATGTCAGCAGCAAGTAGTTCAGATAAGAATGGAAAACACAAAAGAAAAAGGAAGCACCAAAATGAAGATGATGAAGAAGGCGAAGATGATGAAGATGAGAATGAGGAACCATCAACCCAGAAGAAGCGTCGGATAGTTTGGTCCGAAGAGCTGCACAAAAAGTTTCTTGACGTTTTCTATTATCTGGGACCGGAAAAGGCTGTACCAAAGAAAATTCTTGAGCTGATGAATGTTGAAGATCTCTCAAGGGGTAATGTGGCCAGCCATCTGCAGAAGTTTAGGGAACAACTTAAAAAAGGCGGCAGTAAGAAGGAAAAGCAGAGAGCTAGCATGGTTGTTGATCTGGGGAGAAAAGATTCTTCTTACATGCTGCACACGGGTCCAGTTGATGAATCTGGAGGAGGCTCTCAAATCCTGCTCCCTTATCCTCATACATACCTCCGCAGATGCTTTCGAGATCAAACTCCCCCACTGATTTTAACATGCCAAGAATTAATCCTTCTTCTCATCTGCTGCGACCTGGCACCAGTAGAGCAAACTCAATTGCAGCAGAAAAATTCTACCATTGACATCCGACAGTCCACTCCCAATAATAATGGTTCCACAACTACTTTTCCATATAAAGGATTGCCTGACAACTCAGTCGGTTATGATTGCAATACTTCAATGTTACAAGGAAATCCACAGCAAAAACATGGGACGCTAGAGTTTGGAAATCAGTCTTCTCTTAGAGTGAATTCATTGAATCCCAAATCATTTGACAATGCCCTTTGTAGATCGTCCAATTTTCTGGATAACGATGGATATGGTGAAAGTTGGCAGGGTGGTATGCAGGGTTGTGGTCAATTATACCAATTTCCATCAACTGCTTTGCTTAGGAGTGAGGCTTCCAATTTTGGTCAATTTCCTGCTAATAACTTGGGTGTTTCTTCAAGTACACTTCAGATCGGGAACACTCCAAATGGCTTCTCTTCTGTAAGTGCACTTTCAGCTTCTGTGGAGGAACCAAGAGAAAACTTACATATAAAAAACCAAAGCCATGTTGTACCAACCATGTATTGCACGCCAAATCAATGGTGGGAAGATCATAAGCAAGATTACAACCACAACTGGAACCTTTCGTCCATCGTTTCTAGCAATGGTGTTGTAGATCCACTAAGCCGGACCTTGGACCAAAATGATGCAGTTTGCAGTAGAAGCATAAATTCATCTTTGTTTGACCAGTTTAATGGGGAAAATAGAACTATCGTACAGCGCCTAGAGGTTGAGAATTCGACCATGCATACAAAGATTGATCCTAATGCGGATTACATATTGTTAGAGCAAGCAAAGTCCAATGATGGCTTGGTTCAAAATAGTCTTGAATCACTGGATAACCAGGTTGAATTGGAGAAAGAGTTTGATTTACTGGACGGAGAGTTTGGCTTTGATGCAATACAGGAACAAAAGGAGAATGACGAGTATGATTTACTGGATGGAGGGTTTCGATTTGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

688

Amino Acids

77.46

Weight (kDa)

5.11

Isoelectric Point (pI)

44.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	27 - 152	2e-15	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1208
AccB1I	GGYRCC	1 cut(s)	1090
AccIII	TCCGGA	2 cut(s)	64, 480
AciI	CCGC	5 cut(s)	86, 159, 867, 1009, 1871
AclWI	GGATC	4 cut(s)	63, 513, 1712, 1856
AcoI	YGGCCR	1 cut(s)	825
AcsI	RAATTY	7 cut(s)	113, 186, 780, 1123, 1303, 1771, 1837
AcuI	CTGAAG	1 cut(s)	1493
AfaI	GTAC	5 cut(s)	234, 771, 1504, 1614, 1818
AfiI	CCNNNNNNNGG	2 cut(s)	1190, 1735
AflIII	ACRYGT	1 cut(s)	472
AjnI	CCWGG	4 cut(s)	81, 216, 1086, 1944
AloI	GAACNNNNNNTCC	2 cut(s)	1673, 1705
AluBI	AGCT	8 cut(s)	262, 271, 388, 718, 790, 893, 1559, 2063
AluI	AGCT	8 cut(s)	262, 271, 388, 718, 790, 893, 1559, 2063
Alw21I	GWGCWC	1 cut(s)	1552
Alw44I	GTGCAC	1 cut(s)	1548
AlwI	GGATC	4 cut(s)	63, 513, 1712, 1856
AlwNI	CAGNNNCTG	1 cut(s)	1562
Aor13HI	TCCGGA	2 cut(s)	64, 480
AoxI	GGCC	1 cut(s)	825
ApaLI	GTGCAC	1 cut(s)	1548
ApeKI	GCWGC	6 cut(s)	130, 575, 718, 937, 1080, 1114
ApoI	RAATTY	7 cut(s)	113, 186, 780, 1123, 1303, 1771, 1837
ArsI	GACNNNNNNTTYG	2 cut(s)	1970, 2002
AseI	ATTAAT	2 cut(s)	314, 1061
Asp700I	GAANNNNTTC	1 cut(s)	922
AspLEI	GCGC	1 cut(s)	1824
AspS9I	GGNCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
AsuHPI	GGTGA	5 cut(s)	47, 389, 442, 569, 1388
AsuNHI	GCTAGC	1 cut(s)	893
AvaII	GGWCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
BaeGI	GKGCMC	2 cut(s)	282, 1552
BalI	TGGCCA	1 cut(s)	827
BanI	GGYRCC	1 cut(s)	1090
BbsI	GAAGAC	2 cut(s)	469, 1281
Bbv12I	GWGCWC	1 cut(s)	1552
BbvI	GCAGC	6 cut(s)	117, 587, 705, 924, 1067, 1126
BccI	CCATC	9 cut(s)	62, 245, 685, 840, 1361, 1435, 1700, 1901, 2036
BciT130I	CCWGG	4 cut(s)	83, 218, 1088, 1946
BclI	TGATCA	2 cut(s)	37, 523
BfaI	CTAG	4 cut(s)	894, 1271, 1701, 1826
BfmI	CTRYAG	1 cut(s)	836
BfoI	RGCGCY	1 cut(s)	1825
BglII	AGATCT	1 cut(s)	805
BisI	GCNGC	7 cut(s)	131, 576, 719, 868, 938, 1081, 1115
BlsI	GCNGC	7 cut(s)	132, 577, 720, 869, 939, 1082, 1116
Bme1390I	CCNGG	4 cut(s)	83, 218, 1088, 1946
Bme18I	GGWCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
BmgT120I	GGNCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
BmiI	GGNNCC	7 cut(s)	675, 756, 948, 1092, 1168, 1572, 1682
BmrFI	CCNGG	4 cut(s)	83, 218, 1088, 1946
BmrI	ACTGGG	1 cut(s)	29
BmsI	GCATC	4 cut(s)	228, 1004, 1738, 1987
BmtI	GCTAGC	1 cut(s)	897
BmuI	ACTGGG	1 cut(s)	29
BpiI	GAAGAC	2 cut(s)	469, 1281
BpmI	CTGGAG	1 cut(s)	984
Bpu10I	CCTNAGC	1 cut(s)	1442
BpuEI	CTTGAG	2 cut(s)	796, 806
BsaBI	GATNNNNATC	1 cut(s)	54
BsaJI	CCNNGG	2 cut(s)	409, 1734
BsaWI	WCCGGW	3 cut(s)	64, 480, 757
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 1949, 1979
Bsc4I	CCNNNNNNNGG	2 cut(s)	1190, 1735
Bse1I	ACTGG	8 cut(s)	24, 950, 1094, 1682, 1789, 1941, 1980, 2043
Bse3DI	GCAATG	2 cut(s)	379, 1711
Bse8I	GATNNNNATC	1 cut(s)	54
BseAI	TCCGGA	2 cut(s)	64, 480
BseBI	CCWGG	4 cut(s)	83, 218, 1088, 1946
BseDI	CCNNGG	2 cut(s)	409, 1734
BseGI	GGATG	6 cut(s)	10, 73, 256, 573, 1137, 2047
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	2 cut(s)	1190, 1735
BseMI	GCAATG	2 cut(s)	379, 1711
BseMII	CTCAG	2 cut(s)	375, 1221
BseNI	ACTGG	8 cut(s)	24, 950, 1094, 1682, 1789, 1941, 1980, 2043
BseRI	GAGGAG	1 cut(s)	981
BseSI	GKGCMC	2 cut(s)	282, 1552
BseXI	GCAGC	6 cut(s)	117, 587, 705, 924, 1067, 1126
BsgI	GTGCAG	2 cut(s)	704, 923
BshFI	GGCC	1 cut(s)	827
BshNI	GGYRCC	1 cut(s)	1090
BsiHKAI	GWGCWC	1 cut(s)	1552
BsiSI	CCGG	4 cut(s)	65, 481, 758, 1729
BslFI	GGGAC	2 cut(s)	768, 1279
BslI	CCNNNNNNNGG	2 cut(s)	1190, 1735
BsmFI	GGGAC	2 cut(s)	768, 1279
BsnI	GGCC	1 cut(s)	827
Bsp1286I	GDGCHC	2 cut(s)	282, 1552
Bsp13I	TCCGGA	2 cut(s)	64, 480
Bsp1407I	TGTACA	1 cut(s)	232
Bsp19I	CCATGG	1 cut(s)	409
BspACI	CCGC	5 cut(s)	86, 159, 867, 1009, 1871
BspANI	GGCC	1 cut(s)	827
BspCNI	CTCAG	2 cut(s)	376, 1220
BspEI	TCCGGA	2 cut(s)	64, 480
BspLI	GGNNCC	7 cut(s)	675, 756, 948, 1092, 1168, 1572, 1682
BspMAI	CTGCAG	1 cut(s)	840
BspOI	GCTAGC	1 cut(s)	897
BspPI	GGATC	4 cut(s)	63, 513, 1712, 1856
BspQI	GCTCTTC	1 cut(s)	708
BspT107I	GGYRCC	1 cut(s)	1090
BsrDI	GCAATG	2 cut(s)	379, 1711
BsrGI	TGTACA	1 cut(s)	232
BsrI	ACTGG	8 cut(s)	24, 950, 1094, 1682, 1789, 1941, 1980, 2043
BssECI	CCNNGG	2 cut(s)	409, 1734
BssT1I	CCWWGG	2 cut(s)	409, 1734
Bst2UI	CCWGG	4 cut(s)	83, 218, 1088, 1946
Bst4CI	ACNGT	1 cut(s)	1146
Bst6I	CTCTTC	2 cut(s)	708, 1543
BstAUI	TGTACA	1 cut(s)	232
BstC8I	GCNNGC	4 cut(s)	829, 895, 1631, 1893
BstDEI	CTNAG	9 cut(s)	274, 384, 501, 513, 1207, 1295, 1442, 1724, 2064
BstDSI	CCRYGG	1 cut(s)	409
BstF5I	GGATG	6 cut(s)	10, 73, 256, 573, 1137, 2047
BstH2I	RGCGCY	1 cut(s)	1825
BstHHI	GCGC	1 cut(s)	1824
BstMWI	GCNNNNNNNGC	6 cut(s)	167, 176, 268, 277, 1556, 1764
BstNI	CCWGG	4 cut(s)	83, 218, 1088, 1946
BstNSI	RCATGY	3 cut(s)	476, 937, 1053
BstSCI	CCNGG	4 cut(s)	81, 216, 1086, 1944
BstSFI	CTRYAG	1 cut(s)	836
BstSLI	GKGCMC	2 cut(s)	282, 1552
BstV1I	GCAGC	6 cut(s)	117, 587, 705, 924, 1067, 1126
BstV2I	GAAGAC	2 cut(s)	469, 1281
BstX2I	RGATCY	2 cut(s)	805, 1717
BstXI	CCANNNNNNTGG	3 cut(s)	1357, 1641, 1796
BstYI	RGATCY	2 cut(s)	805, 1717
BsuRI	GGCC	1 cut(s)	827
BtgI	CCRYGG	1 cut(s)	409
BtsCI	GGATG	6 cut(s)	10, 73, 256, 573, 1137, 2047
BtsIMutI	CAGTG	4 cut(s)	232, 366, 1037, 1934
Cac8I	GCNNGC	4 cut(s)	829, 895, 1631, 1893
CaiI	CAGNNNCTG	1 cut(s)	1562
CfoI	GCGC	1 cut(s)	1824
Cfr13I	GGNCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
CseI	GACGC	2 cut(s)	683, 1276
CsiI	ACCWGGT	2 cut(s)	216, 1944
Csp6I	GTAC	5 cut(s)	233, 770, 1503, 1613, 1817
CviQI	GTAC	5 cut(s)	233, 770, 1503, 1613, 1817
DdeI	CTNAG	9 cut(s)	274, 384, 501, 513, 1207, 1295, 1442, 1724, 2064
DrdI	GACNNNNNNGTC	1 cut(s)	1208
DseDI	GACNNNNNNGTC	1 cut(s)	1208
EaeI	YGGCCR	1 cut(s)	825
Eam1104I	CTCTTC	2 cut(s)	708, 1543
EarI	CTCTTC	2 cut(s)	708, 1543
Eco130I	CCWWGG	2 cut(s)	409, 1734
Eco47I	GGWCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
Eco57I	CTGAAG	1 cut(s)	1493
EcoRI	GAATTC	2 cut(s)	1303, 1837
EcoRII	CCWGG	4 cut(s)	81, 216, 1086, 1944
EcoT14I	CCWWGG	2 cut(s)	409, 1734
EcoT22I	ATGCAT	2 cut(s)	172, 1851
ErhI	CCWWGG	2 cut(s)	409, 1734
FaqI	GGGAC	2 cut(s)	768, 1279
FbaI	TGATCA	2 cut(s)	37, 523
Fnu4HI	GCNGC	7 cut(s)	131, 576, 719, 868, 938, 1081, 1115
FokI	GGATG	6 cut(s)	17, 80, 263, 580, 1124, 2054
Fsp4HI	GCNGC	7 cut(s)	131, 576, 719, 868, 938, 1081, 1115
FspBI	CTAG	4 cut(s)	894, 1271, 1701, 1826
GlaI	GCGC	1 cut(s)	1823
GluI	GCNGC	7 cut(s)	131, 576, 719, 868, 938, 1081, 1115
GsuI	CTGGAG	1 cut(s)	984
HaeII	RGCGCY	1 cut(s)	1825
HaeIII	GGCC	1 cut(s)	827
HapII	CCGG	4 cut(s)	65, 481, 758, 1729
HgaI	GACGC	2 cut(s)	683, 1276
HhaI	GCGC	1 cut(s)	1824
Hin6I	GCGC	1 cut(s)	1822
HinP1I	GCGC	1 cut(s)	1822
HincII	GTYRAC	1 cut(s)	442
HindII	GTYRAC	1 cut(s)	442
HindIII	AAGCTT	1 cut(s)	2061
HinfI	GANTC	5 cut(s)	402, 923, 959, 1312, 1931
HpaI	GTTAAC	1 cut(s)	442
HpaII	CCGG	4 cut(s)	65, 481, 758, 1729
HphI	GGTGA	5 cut(s)	47, 389, 442, 569, 1388
Hpy166II	GTNNAC	4 cut(s)	442, 1149, 1505, 1550
Hpy188I	TCNGA	6 cut(s)	42, 589, 699, 712, 1142, 1512
Hpy8I	GTNNAC	4 cut(s)	442, 1149, 1505, 1550
Hpy99I	CGWCG	1 cut(s)	699
HpyAV	CCTTC	7 cut(s)	4, 391, 548, 557, 638, 871, 1076
HpyCH4III	ACNGT	1 cut(s)	1146
HpyCH4IV	ACGT	1 cut(s)	738
HpyF10VI	GCNNNNNNNGC	6 cut(s)	167, 176, 268, 277, 1556, 1764
HpyF3I	CTNAG	9 cut(s)	274, 384, 501, 513, 1207, 1295, 1442, 1724, 2064
HpySE526I	ACGT	1 cut(s)	738
HspAI	GCGC	1 cut(s)	1822
Kpn2I	TCCGGA	2 cut(s)	64, 480
Ksp22I	TGATCA	2 cut(s)	37, 523
KspAI	GTTAAC	1 cut(s)	442
LguI	GCTCTTC	1 cut(s)	708
LmnI	GCTCC	2 cut(s)	267, 990
Lsp1109I	GCAGC	6 cut(s)	117, 587, 705, 924, 1067, 1126
LweI	GCATC	4 cut(s)	228, 1004, 1738, 1987
MabI	ACCWGGT	2 cut(s)	216, 1944
MaeI	CTAG	4 cut(s)	894, 1271, 1701, 1826
MaeII	ACGT	1 cut(s)	738
MaeIII	GTNAC	2 cut(s)	151, 1236
MfeI	CAATTG	1 cut(s)	1109
MflI	RGATCY	2 cut(s)	805, 1717
MhlI	GDGCHC	2 cut(s)	282, 1552
MlsI	TGGCCA	1 cut(s)	827
MluNI	TGGCCA	1 cut(s)	827
MmeI	TCCRAC	2 cut(s)	677, 1165
Mox20I	TGGCCA	1 cut(s)	827
Mph1103I	ATGCAT	2 cut(s)	172, 1851
MroI	TCCGGA	2 cut(s)	64, 480
MroXI	GAANNNNTTC	1 cut(s)	922
MscI	TGGCCA	1 cut(s)	827
MseI	TTAA	7 cut(s)	314, 344, 441, 858, 1046, 1061, 1794
MslI	CAYNNNNRTG	3 cut(s)	336, 449, 627
Msp20I	TGGCCA	1 cut(s)	827
MspI	CCGG	4 cut(s)	65, 481, 758, 1729
MspR9I	CCNGG	4 cut(s)	83, 218, 1088, 1946
MunI	CAATTG	1 cut(s)	1109
MvaI	CCWGG	4 cut(s)	83, 218, 1088, 1946
MwoI	GCNNNNNNNGC	6 cut(s)	167, 176, 268, 277, 1556, 1764
NcoI	CCATGG	1 cut(s)	409
NheI	GCTAGC	1 cut(s)	893
NlaIV	GGNNCC	7 cut(s)	675, 756, 948, 1092, 1168, 1572, 1682
NsiI	ATGCAT	2 cut(s)	172, 1851
NspI	RCATGY	3 cut(s)	476, 937, 1053
PciI	ACATGT	1 cut(s)	472
PciSI	GCTCTTC	1 cut(s)	708
PdmI	GAANNNNTTC	1 cut(s)	922
PfeI	GAWTC	5 cut(s)	402, 923, 959, 1312, 1931
PflFI	GACNNNGTC	1 cut(s)	533
PkrI	GCNGC	7 cut(s)	132, 577, 720, 869, 939, 1082, 1116
PscI	ACATGT	1 cut(s)	472
PshBI	ATTAAT	2 cut(s)	314, 1061
Psp6I	CCWGG	4 cut(s)	81, 216, 1086, 1944
PspGI	CCWGG	4 cut(s)	81, 216, 1086, 1944
PspN4I	GGNNCC	7 cut(s)	675, 756, 948, 1092, 1168, 1572, 1682
PspPI	GGNCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
PstI	CTGCAG	1 cut(s)	840
PstNI	CAGNNNCTG	1 cut(s)	1562
PsuI	RGATCY	2 cut(s)	805, 1717
PsyI	GACNNNGTC	1 cut(s)	533
RsaI	GTAC	5 cut(s)	234, 771, 1504, 1614, 1818
RsaNI	GTAC	5 cut(s)	233, 770, 1503, 1613, 1817
RseI	CAYNNNNRTG	3 cut(s)	336, 449, 627
SapI	GCTCTTC	1 cut(s)	708
SaqAI	TTAA	7 cut(s)	314, 344, 441, 858, 1046, 1061, 1794
SatI	GCNGC	7 cut(s)	131, 576, 719, 868, 938, 1081, 1115
Sau96I	GGNCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
ScrFI	CCNGG	4 cut(s)	83, 218, 1088, 1946
SduI	GDGCHC	2 cut(s)	282, 1552
SexAI	ACCWGGT	2 cut(s)	216, 1944
SfaNI	GCATC	4 cut(s)	228, 1004, 1738, 1987
SfcI	CTRYAG	1 cut(s)	836
SinI	GGWCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
SmiMI	CAYNNNNRTG	3 cut(s)	336, 449, 627
SmlI	CTYRAG	2 cut(s)	785, 811
SmoI	CTYRAG	2 cut(s)	785, 811
SsiI	CCGC	5 cut(s)	86, 159, 867, 1009, 1871
SspMI	CTAG	4 cut(s)	894, 1271, 1701, 1826
StyD4I	CCNGG	4 cut(s)	81, 216, 1086, 1944
StyI	CCWWGG	2 cut(s)	409, 1734
TaaI	ACNGT	1 cut(s)	1146
TaiI	ACGT	1 cut(s)	741
TaqI	TCGA	3 cut(s)	1021, 1841, 2053
TatI	WGTACW	2 cut(s)	232, 1502
TauI	GCSGC	1 cut(s)	870
TfiI	GAWTC	5 cut(s)	402, 923, 959, 1312, 1931
Tru1I	TTAA	7 cut(s)	314, 344, 441, 858, 1046, 1061, 1794
Tru9I	TTAA	7 cut(s)	314, 344, 441, 858, 1046, 1061, 1794
TscAI	CASTG	4 cut(s)	232, 366, 1044, 1941
TseI	GCWGC	6 cut(s)	130, 575, 718, 937, 1080, 1114
TspDTI	ATGAA	8 cut(s)	407, 645, 654, 672, 809, 972, 1296, 1764
TspGWI	ACGGA	1 cut(s)	1995
TspRI	CASTG	4 cut(s)	232, 366, 1044, 1941
Tth111I	GACNNNGTC	1 cut(s)	533
VneI	GTGCAC	1 cut(s)	1548
VpaK11BI	GGWCC	7 cut(s)	13, 289, 708, 755, 947, 1731, 1738
VspI	ATTAAT	2 cut(s)	314, 1061
XapI	RAATTY	7 cut(s)	113, 186, 780, 1123, 1303, 1771, 1837
XceI	RCATGY	3 cut(s)	476, 937, 1053
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1641, 1909
XmnI	GAANNNNTTC	1 cut(s)	922
XspI	CTAG	4 cut(s)	894, 1271, 1701, 1826
Zsp2I	ATGCAT	2 cut(s)	172, 1851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.