Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Forward (+)

54471816 .. 54475106

Gene Structure 3291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG367400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGATGCGAAGGACCAACTGGGAGGTTCTGTTGGTGATCAGAATGGGGATATGGATCGGTTTCCGGATGGTATGCGTGTCCTGGCGGTTGATGACGACCTAACTTATCTCAAATTCTTAGAGGCTACGCTGCGTAAATGCAATTATGAGGTAACTACCGCTAATCATGCATACGAGGCGCTCCAAATTTTGAGGGAAAACAGAAACAAGTTTGACCTGGTAATCAGTGATGTACAGATGCCAGATATGGATGGCTTTCAGCTCCTAAAGCTCTTAGGGCACGAAATGGACCTACCTAAGTTTAGGGAACAACTTAAAAAAGGCGGCAGTAAGAAGGACAAGCAGAGAGCTAGCATTGTTGTTGATCTGGGGAGAAAAGATTCTTCTTACATGCTGCACACGGGTCCAGTTGATGAATCTGGAGGGAGGCTCTCAAATCCTGCTCCCTTGTCCTCATACATACCTCCGCAGATGCTTTCGAGATCAAACTCCCCCACTGATTTTAACATGCCAAGAATTAATCCTTCTCATCTGCTGCTACCTGGTCAGTCCCAAAATTTGTGCAACTCTATCAATAATGTAGCAAACCTCCAGCCAAGTGTGCTTACAAACCAAAGCCGAAACCTTTTTCAAGTATCTCAGGCACCAGTAGAGCAAAATCAATTGCAGCAGAAAAATTCTACCATTGACATCCGACAGTCCACTCCCAATAATAATGGTTCCACAACTACTTTTCCATATAAAGGATTGCCTGGAAGCTCAGTCGGTTATGATTGTAATACTTCAATGTTACAAGGAAATCCACAGAAAAAACATGGGACGCTAGAGTTTGGAAATCAGTCTTCTCTTAGAGTGAATTCATTGAATCCTAAATCATTTGACAATGCCCTTTGTAGATCGTCCAATTTTCTGGATAACGATGGATATGGTGAAAGTTGGCAGGGTGGTAAGCAGGGTTGTGGTCAGTTATACCAATTTCCATCAACTGCTTTGCTCAGGAGTGAGGCTTCCAATTTTGGTCAATTTCCTGCTAATAACTTGGGTGTTTCTTCCAGTACACCTCAGATCGGGAACACTCCAAATGACTTCTCTTCTGTAAGTGCACTTTCAGCTTCTGTGGAGGAACCAAGAGAAAACATACATATAAAAAACCAAGGCCATGTTGTACCAACCATGTATTGCACACCAAATCAATGGTGGGAAGATCATAAGCACAACTGGAACCTCTCTTCCATCGTTTCTAGCAATGGTGTTGTAGATCCACTTAGCCGGACCTTGGACCAAAATGATGCAGTTTGCAGTAGAAGCATAAATTCATCTTTGTTTGACCAGTTTAATGGGGGAAATAGAACTATCGTACAGCGCCTTGAGGTTGAGAATTCGACCATGCATACAAAGATTGATCCTAATGAGGATTACATATTATTAGAGCAAGCAAAGTCCAATGATGGCTTGGTTCAAAATAGTCTTGAATCACTGGATAACCAGGTTGAATTGGAGAATGAGTTTGATTTACTGGACGGAGAGTTTGGATTTGATGCAATACAGGAACAAAAGGAGAATGACGAGTATGATTTACTGGATGGAGGGTTTCGATTTGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

535

Amino Acids

59.41

Weight (kDa)

4.84

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	27 - 93	1.3e-13	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	643
AccIII	TCCGGA	1 cut(s)	64
AciI	CCGC	4 cut(s)	86, 159, 324, 467
AclWI	GGATC	3 cut(s)	63, 1253, 1397
AcsI	RAATTY	7 cut(s)	113, 186, 556, 676, 856, 1312, 1378
AfaI	GTAC	4 cut(s)	234, 1057, 1167, 1359
AfiI	CCNNNNNNNGG	3 cut(s)	743, 1067, 1276
AgsI	TTSAA	7 cut(s)	632, 786, 865, 1460, 1472, 1493, 1601
AjnI	CCWGG	5 cut(s)	81, 216, 541, 751, 1485
AloI	GAACNNNNNNTCC	2 cut(s)	1214, 1246
AluBI	AGCT	6 cut(s)	262, 271, 350, 759, 1112, 1604
AluI	AGCT	6 cut(s)	262, 271, 350, 759, 1112, 1604
Alw21I	GWGCWC	1 cut(s)	1105
Alw44I	GTGCAC	1 cut(s)	1101
AlwI	GGATC	3 cut(s)	63, 1253, 1397
AlwNI	CAGNNNCTG	1 cut(s)	1115
Aor13HI	TCCGGA	1 cut(s)	64
AoxI	GGCC	1 cut(s)	1156
ApaLI	GTGCAC	1 cut(s)	1101
ApeKI	GCWGC	4 cut(s)	130, 394, 535, 667
ApoI	RAATTY	7 cut(s)	113, 186, 556, 676, 856, 1312, 1378
ArsI	GACNNNNNNTTYG	2 cut(s)	1511, 1543
AseI	ATTAAT	1 cut(s)	519
Asp700I	GAANNNNTTC	1 cut(s)	379
AspLEI	GCGC	2 cut(s)	181, 1365
AspS9I	GGNCC	5 cut(s)	13, 289, 404, 1272, 1279
AsuHPI	GGTGA	2 cut(s)	47, 941
AsuNHI	GCTAGC	1 cut(s)	350
AvaII	GGWCC	5 cut(s)	13, 289, 404, 1272, 1279
BaeGI	GKGCMC	2 cut(s)	282, 1105
BanI	GGYRCC	1 cut(s)	643
BbsI	GAAGAC	1 cut(s)	834
Bbv12I	GWGCWC	1 cut(s)	1105
BbvI	GCAGC	4 cut(s)	117, 381, 522, 679
BccI	CCATC	7 cut(s)	62, 245, 914, 988, 1241, 1442, 1577
BciT130I	CCWGG	5 cut(s)	83, 218, 543, 753, 1487
BclI	TGATCA	1 cut(s)	37
BfaI	CTAG	3 cut(s)	351, 824, 1242
BfoI	RGCGCY	2 cut(s)	182, 1366
BisI	GCNGC	5 cut(s)	131, 325, 395, 536, 668
BlsI	GCNGC	5 cut(s)	132, 326, 396, 537, 669
Bme1390I	CCNGG	5 cut(s)	83, 218, 543, 753, 1487
Bme18I	GGWCC	5 cut(s)	13, 289, 404, 1272, 1279
BmgT120I	GGNCC	5 cut(s)	13, 289, 404, 1272, 1279
BmiI	GGNNCC	5 cut(s)	405, 645, 721, 1125, 1223
BmrFI	CCNGG	5 cut(s)	83, 218, 543, 753, 1487
BmrI	ACTGGG	1 cut(s)	29
BmsI	GCATC	4 cut(s)	228, 462, 1279, 1528
BmtI	GCTAGC	1 cut(s)	354
BmuI	ACTGGG	1 cut(s)	29
BpiI	GAAGAC	1 cut(s)	834
BplI	GAGNNNNNCTC	2 cut(s)	414, 446
BpmI	CTGGAG	2 cut(s)	441, 575
Bpu10I	CCTNAGC	1 cut(s)	995
BpuEI	CTTGAG	1 cut(s)	1388
BsaBI	GATNNNNATC	1 cut(s)	54
BsaJI	CCNNGG	2 cut(s)	1153, 1275
BsaWI	WCCGGW	1 cut(s)	64
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 1490, 1520
Bsc4I	CCNNNNNNNGG	3 cut(s)	743, 1067, 1276
Bse1I	ACTGG	9 cut(s)	24, 407, 647, 1053, 1223, 1330, 1482, 1521, 1584
Bse3DI	GCAATG	1 cut(s)	1252
Bse8I	GATNNNNATC	1 cut(s)	54
BseAI	TCCGGA	1 cut(s)	64
BseBI	CCWGG	5 cut(s)	83, 218, 543, 753, 1487
BseDI	CCNNGG	2 cut(s)	1153, 1275
BseGI	GGATG	5 cut(s)	10, 73, 256, 690, 1588
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	3 cut(s)	743, 1067, 1276
BseMI	GCAATG	1 cut(s)	1252
BseMII	CTCAG	4 cut(s)	653, 774, 1009, 1076
BseNI	ACTGG	9 cut(s)	24, 407, 647, 1053, 1223, 1330, 1482, 1521, 1584
BseSI	GKGCMC	2 cut(s)	282, 1105
BseXI	GCAGC	4 cut(s)	117, 381, 522, 679
BsgI	GTGCAG	1 cut(s)	380
BshFI	GGCC	1 cut(s)	1158
BshNI	GGYRCC	1 cut(s)	643
BsiHKAI	GWGCWC	1 cut(s)	1105
BsiSI	CCGG	2 cut(s)	65, 1270
BslFI	GGGAC	2 cut(s)	535, 832
BslI	CCNNNNNNNGG	3 cut(s)	743, 1067, 1276
BsmFI	GGGAC	2 cut(s)	535, 832
BsnI	GGCC	1 cut(s)	1158
Bsp1286I	GDGCHC	2 cut(s)	282, 1105
Bsp13I	TCCGGA	1 cut(s)	64
Bsp1407I	TGTACA	1 cut(s)	232
Bsp143I	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
BspACI	CCGC	4 cut(s)	86, 159, 324, 467
BspANI	GGCC	1 cut(s)	1158
BspCNI	CTCAG	4 cut(s)	652, 773, 1008, 1075
BspEI	TCCGGA	1 cut(s)	64
BspLI	GGNNCC	5 cut(s)	405, 645, 721, 1125, 1223
BspOI	GCTAGC	1 cut(s)	354
BspPI	GGATC	3 cut(s)	63, 1253, 1397
BspT107I	GGYRCC	1 cut(s)	643
BsrDI	GCAATG	1 cut(s)	1252
BsrGI	TGTACA	1 cut(s)	232
BsrI	ACTGG	9 cut(s)	24, 407, 647, 1053, 1223, 1330, 1482, 1521, 1584
BssECI	CCNNGG	2 cut(s)	1153, 1275
BssMI	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
BssT1I	CCWWGG	2 cut(s)	1153, 1275
Bst2UI	CCWGG	5 cut(s)	83, 218, 543, 753, 1487
Bst4CI	ACNGT	1 cut(s)	699
Bst6I	CTCTTC	2 cut(s)	1096, 1234
BstAUI	TGTACA	1 cut(s)	232
BstC8I	GCNNGC	2 cut(s)	352, 1434
BstF5I	GGATG	5 cut(s)	10, 73, 256, 690, 1588
BstH2I	RGCGCY	2 cut(s)	182, 1366
BstHHI	GCGC	2 cut(s)	181, 1365
BstKTI	GATC	9 cut(s)	40, 58, 367, 485, 899, 1068, 1207, 1261, 1405
BstMBI	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
BstMWI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 601, 1109, 1305
BstNI	CCWGG	5 cut(s)	83, 218, 543, 753, 1487
BstNSI	RCATGY	2 cut(s)	394, 511
BstSCI	CCNGG	5 cut(s)	81, 216, 541, 751, 1485
BstSLI	GKGCMC	2 cut(s)	282, 1105
BstV1I	GCAGC	4 cut(s)	117, 381, 522, 679
BstV2I	GAAGAC	1 cut(s)	834
BstX2I	RGATCY	1 cut(s)	1258
BstXI	CCANNNNNNTGG	3 cut(s)	910, 1194, 1337
BstYI	RGATCY	1 cut(s)	1258
BsuRI	GGCC	1 cut(s)	1158
BtsCI	GGATG	5 cut(s)	10, 73, 256, 690, 1588
BtsIMutI	CAGTG	3 cut(s)	232, 495, 1475
Cac8I	GCNNGC	2 cut(s)	352, 1434
CaiI	CAGNNNCTG	1 cut(s)	1115
CfoI	GCGC	2 cut(s)	181, 1365
Cfr13I	GGNCC	5 cut(s)	13, 289, 404, 1272, 1279
CseI	GACGC	1 cut(s)	829
CsiI	ACCWGGT	3 cut(s)	216, 541, 1485
Csp6I	GTAC	4 cut(s)	233, 1056, 1166, 1358
CviAII	CATG	7 cut(s)	167, 391, 508, 815, 1160, 1174, 1387
CviQI	GTAC	4 cut(s)	233, 1056, 1166, 1358
DpnI	GATC	9 cut(s)	39, 57, 366, 484, 898, 1067, 1206, 1260, 1404
DpnII	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
Eam1104I	CTCTTC	2 cut(s)	1096, 1234
EarI	CTCTTC	2 cut(s)	1096, 1234
Eco130I	CCWWGG	2 cut(s)	1153, 1275
Eco47I	GGWCC	5 cut(s)	13, 289, 404, 1272, 1279
EcoRI	GAATTC	2 cut(s)	856, 1378
EcoRII	CCWGG	5 cut(s)	81, 216, 541, 751, 1485
EcoT14I	CCWWGG	2 cut(s)	1153, 1275
EcoT22I	ATGCAT	2 cut(s)	172, 1392
ErhI	CCWWGG	2 cut(s)	1153, 1275
FaeI	CATG	7 cut(s)	170, 394, 511, 818, 1163, 1177, 1390
FaqI	GGGAC	2 cut(s)	535, 832
FatI	CATG	7 cut(s)	166, 390, 507, 814, 1159, 1173, 1386
FbaI	TGATCA	1 cut(s)	37
Fnu4HI	GCNGC	5 cut(s)	131, 325, 395, 536, 668
FokI	GGATG	5 cut(s)	17, 80, 263, 677, 1595
Fsp4HI	GCNGC	5 cut(s)	131, 325, 395, 536, 668
FspBI	CTAG	3 cut(s)	351, 824, 1242
GlaI	GCGC	2 cut(s)	180, 1364
GluI	GCNGC	5 cut(s)	131, 325, 395, 536, 668
GsuI	CTGGAG	2 cut(s)	441, 575
HaeII	RGCGCY	2 cut(s)	182, 1366
HaeIII	GGCC	1 cut(s)	1158
HapII	CCGG	2 cut(s)	65, 1270
HgaI	GACGC	1 cut(s)	829
HhaI	GCGC	2 cut(s)	181, 1365
Hin1II	CATG	7 cut(s)	170, 394, 511, 818, 1163, 1177, 1390
Hin6I	GCGC	2 cut(s)	179, 1363
HinP1I	GCGC	2 cut(s)	179, 1363
HindIII	AAGCTT	1 cut(s)	1602
HinfI	GANTC	4 cut(s)	380, 416, 865, 1472
HpaII	CCGG	2 cut(s)	65, 1270
HphI	GGTGA	2 cut(s)	47, 941
Hpy166II	GTNNAC	3 cut(s)	702, 1058, 1103
Hpy188I	TCNGA	3 cut(s)	42, 695, 1065
Hpy188III	TCNNGA	7 cut(s)	65, 420, 480, 911, 997, 1069, 1469
Hpy8I	GTNNAC	3 cut(s)	702, 1058, 1103
HpyAV	CCTTC	3 cut(s)	4, 328, 534
HpyCH4III	ACNGT	1 cut(s)	699
HpyF10VI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 601, 1109, 1305
Hsp92II	CATG	7 cut(s)	170, 394, 511, 818, 1163, 1177, 1390
HspAI	GCGC	2 cut(s)	179, 1363
Kpn2I	TCCGGA	1 cut(s)	64
Ksp22I	TGATCA	1 cut(s)	37
Kzo9I	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
LmnI	GCTCC	3 cut(s)	186, 267, 448
Lsp1109I	GCAGC	4 cut(s)	117, 381, 522, 679
LweI	GCATC	4 cut(s)	228, 462, 1279, 1528
MabI	ACCWGGT	3 cut(s)	216, 541, 1485
MaeI	CTAG	3 cut(s)	351, 824, 1242
MaeIII	GTNAC	2 cut(s)	151, 789
MalI	GATC	9 cut(s)	39, 57, 366, 484, 898, 1067, 1206, 1260, 1404
MboI	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
MboII	GAAGA	6 cut(s)	375, 834, 1041, 1083, 1214, 1221
MfeI	CAATTG	1 cut(s)	662
MflI	RGATCY	1 cut(s)	1258
MhlI	GDGCHC	2 cut(s)	282, 1105
MmeI	TCCRAC	1 cut(s)	718
Mph1103I	ATGCAT	2 cut(s)	172, 1392
MroI	TCCGGA	1 cut(s)	64
MroXI	GAANNNNTTC	1 cut(s)	379
MseI	TTAA	4 cut(s)	315, 504, 519, 1335
MspI	CCGG	2 cut(s)	65, 1270
MspR9I	CCNGG	5 cut(s)	83, 218, 543, 753, 1487
MunI	CAATTG	1 cut(s)	662
MvaI	CCWGG	5 cut(s)	83, 218, 543, 753, 1487
MwoI	GCNNNNNNNGC	7 cut(s)	167, 176, 268, 277, 601, 1109, 1305
NdeII	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
NheI	GCTAGC	1 cut(s)	350
NlaIII	CATG	7 cut(s)	170, 394, 511, 818, 1163, 1177, 1390
NlaIV	GGNNCC	5 cut(s)	405, 645, 721, 1125, 1223
NsiI	ATGCAT	2 cut(s)	172, 1392
NspI	RCATGY	2 cut(s)	394, 511
PdmI	GAANNNNTTC	1 cut(s)	379
PfeI	GAWTC	4 cut(s)	380, 416, 865, 1472
PkrI	GCNGC	5 cut(s)	132, 326, 396, 537, 669
PshBI	ATTAAT	1 cut(s)	519
Psp6I	CCWGG	5 cut(s)	81, 216, 541, 751, 1485
PspGI	CCWGG	5 cut(s)	81, 216, 541, 751, 1485
PspN4I	GGNNCC	5 cut(s)	405, 645, 721, 1125, 1223
PspPI	GGNCC	5 cut(s)	13, 289, 404, 1272, 1279
PstNI	CAGNNNCTG	1 cut(s)	1115
PsuI	RGATCY	1 cut(s)	1258
RsaI	GTAC	4 cut(s)	234, 1057, 1167, 1359
RsaNI	GTAC	4 cut(s)	233, 1056, 1166, 1358
SaqAI	TTAA	4 cut(s)	315, 504, 519, 1335
SatI	GCNGC	5 cut(s)	131, 325, 395, 536, 668
Sau3AI	GATC	9 cut(s)	37, 55, 364, 482, 896, 1065, 1204, 1258, 1402
Sau96I	GGNCC	5 cut(s)	13, 289, 404, 1272, 1279
ScrFI	CCNGG	5 cut(s)	83, 218, 543, 753, 1487
SduI	GDGCHC	2 cut(s)	282, 1105
SexAI	ACCWGGT	3 cut(s)	216, 541, 1485
SfaNI	GCATC	4 cut(s)	228, 462, 1279, 1528
SinI	GGWCC	5 cut(s)	13, 289, 404, 1272, 1279
SmlI	CTYRAG	1 cut(s)	1367
SmoI	CTYRAG	1 cut(s)	1367
SsiI	CCGC	4 cut(s)	86, 159, 324, 467
SspMI	CTAG	3 cut(s)	351, 824, 1242
StyD4I	CCNGG	5 cut(s)	81, 216, 541, 751, 1485
StyI	CCWWGG	2 cut(s)	1153, 1275
TaaI	ACNGT	1 cut(s)	699
TaqI	TCGA	3 cut(s)	479, 1382, 1594
TatI	WGTACW	2 cut(s)	232, 1055
TauI	GCSGC	1 cut(s)	327
TfiI	GAWTC	4 cut(s)	380, 416, 865, 1472
Tru1I	TTAA	4 cut(s)	315, 504, 519, 1335
Tru9I	TTAA	4 cut(s)	315, 504, 519, 1335
TscAI	CASTG	3 cut(s)	232, 502, 1482
TseI	GCWGC	4 cut(s)	130, 394, 535, 667
TspDTI	ATGAA	3 cut(s)	429, 849, 1305
TspGWI	ACGGA	1 cut(s)	1536
TspRI	CASTG	3 cut(s)	232, 502, 1482
VneI	GTGCAC	1 cut(s)	1101
VpaK11BI	GGWCC	5 cut(s)	13, 289, 404, 1272, 1279
VspI	ATTAAT	1 cut(s)	519
XapI	RAATTY	7 cut(s)	113, 186, 556, 676, 856, 1312, 1378
XceI	RCATGY	2 cut(s)	394, 511
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1194, 1450
XmnI	GAANNNNTTC	1 cut(s)	379
XspI	CTAG	3 cut(s)	351, 824, 1242
Zsp2I	ATGCAT	2 cut(s)	172, 1392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.