Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Forward (+)

37985469 .. 37989961

Gene Structure 4493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0313900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGAAACTAGTGAAAATAGTCGAAGGCTTCAGAGAATGGAACGACACTGCGGATGCTCTTGCTAAATCGAGCCTTGATCATGACCATAGTGTTTTCATATTTGACCCCCCTCCTCCCCAAGCTGCTACTGCGTTTCTTGATGATCTCTGTGAAGTTTCTAGATCCAGGTCTTCTGTTAGACTTATAACTTGGTTTTTCTTTTTGTTTGCTGTGTTTAATTGGGTCTTTTTTAAGACCTCTGTAACAAAAAAAAATAGTCCAAGGCAAGCCAAAAAAGAACCCTACGGGCCACGGCCCACAATAAATGTCATTATTCAAAAGCTCTTATACCTTGATAGCAGGCACAGGCAGCAATCCGCCATGGCCTCCCCCTCAAGGGCCATCGCATTCAAATGTTCTCCCTCTCTGGCATTTTCTTCGAAAACGCGGATGGACTCGAAACCCAGAACCCTTCAAAACCCATTTTCTAGTTCAACTTCAGGCGCTGCTTCAAGAGAAGCTCGTACAGGCGACACTGCTGAAGCCTCTATCACATTGCAGGAATGGCAGGGTTGGGGCACCACGTCCCCCGTGCCCTCCTTGGTCACCAAAATTGTTCAGGATTTGAAGGTTTTGGAGAAAGATATTGATGCCCAAATGAGCTTTGGTGGCAGTGGTGGCAAGCTTCAGGGAGATTTTAAAGTGCAAGAGGATAGAAAACACAGGAAGACATATAAGGCTTTAGGTGACTCTGAACAAAAGATTCAGTTTTTTTCAGCTAGACAAATAGCATGCCGCTTGCTTGGAAGTAGAGGCTACCTTTGTCAAAAGTGCTGGCTTCCTTTGGAAGATTGTATGTGTTCAAGAGTGGTACAGTGCCCTCTTTGGCCTCGAATGCGATTCTGGTTGTATATGCATCCAAAGGATTTCTTAAGACAGAACAATACTGGAAAGTTGTTATGGCAAGTATTTGGCACTGAAGCTGCAACTTTGTGCCTCTTCGGCATCGCTGAACAGGAAGAAATAATGTGGGATGCATTTAAGCTAGCAGGAAAAAGCAATGTTTGGTGCCTCTATCCCAACAAAAATGCTGTGTTAACTTCTGTTCAGGATGTCTTTGGCCAAGAATCTTCAGCTGATCTGGAAGGTCCATATACCAAGATAAATGAAGACAGAACTCTGAATTTCATTTTGATTGATGGAACATGGAACAATTCTGTTGCGATATTCCGTCGTCTGAAGGATCAAGCAAAGTTAGTATGGGGAGGAGAGGACTTTCCTTGTATTTCCCTGGCCACTGGTGCTTCTGCGATGCATAAACTTCGGCCCCAACCATCATTGGATCGTACCTGTACAGCAGCAGCAGCTATTGGCCTCCTCTCCGAGCTGCACGTTCTTCCAGAGTTCAGGTCCCATGGATTTGATAAGCAGGCTGAAGTTGTAGAGGATGCTTTAGTTGTACTATTAGAGGCTCTAACAAATAGACGACTTCGGATGGGCAGGTCCATCAGTCGTAAAGTAAGACATACGAGTGATTTTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0016143 GO:0016144 GO:0019748 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0050896 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00290 ko00660 ko00966 ko01100 ko01110 ko01210 ko01230 map00290 map00660 map00966 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

Iso_dh

Protein Analysis

507

Amino Acids

57.17

Weight (kDa)

9.21

Isoelectric Point (pI)

46.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DTW	PF03942	266 - 489	1.6e-38	DTW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	185
Acc36I	ACCTGC	1 cut(s)	1470
AccB1I	GGYRCC	2 cut(s)	557, 1047
AccII	CGCG	1 cut(s)	427
AciI	CCGC	4 cut(s)	50, 357, 427, 775
AclWI	GGATC	3 cut(s)	156, 1230, 1329
AcoI	YGGCCR	2 cut(s)	1099, 1272
AcsI	RAATTY	1 cut(s)	1162
AcuI	CTGAAG	8 cut(s)	13, 462, 540, 650, 978, 1095, 1238, 1434
AfaI	GTAC	5 cut(s)	505, 852, 1327, 1333, 1440
AfiI	CCNNNNNNNGG	2 cut(s)	375, 376
AflII	CTTAAG	1 cut(s)	910
AgsI	TTSAA	7 cut(s)	317, 391, 455, 474, 492, 607, 843
AhlI	ACTAGT	1 cut(s)	7
AjiI	CACGTC	1 cut(s)	564
AjnI	CCWGG	2 cut(s)	164, 1269
AlwI	GGATC	3 cut(s)	156, 1230, 1329
AlwNI	CAGNNNCTG	1 cut(s)	485
AoxI	GGCC	9 cut(s)	287, 293, 363, 378, 866, 1099, 1272, 1304, 1351
ApeKI	GCWGC	8 cut(s)	122, 349, 485, 962, 1337, 1340, 1343, 1366
ApoI	RAATTY	1 cut(s)	1162
AspLEI	GCGC	1 cut(s)	485
AspS9I	GGNCC	7 cut(s)	287, 294, 378, 1127, 1305, 1389, 1482
AsuHPI	GGTGA	2 cut(s)	577, 737
AsuII	TTCGAA	1 cut(s)	419
AsuNHI	GCTAGC	1 cut(s)	1024
AvaII	GGWCC	3 cut(s)	1127, 1389, 1482
BaeGI	GKGCMC	3 cut(s)	560, 576, 860
BalI	TGGCCA	2 cut(s)	1101, 1274
BanI	GGYRCC	2 cut(s)	557, 1047
BbsI	GAAGAC	3 cut(s)	162, 713, 1155
BbvI	GCAGC	8 cut(s)	109, 361, 472, 949, 1349, 1352, 1353, 1355
BccI	CCATC	6 cut(s)	389, 424, 1172, 1321, 1468, 1493
BceAI	ACGGC	1 cut(s)	308
BcgI	CGANNNNNNTGC	4 cut(s)	399, 433, 1283, 1317
BciT130I	CCWGG	2 cut(s)	166, 1271
BclI	TGATCA	1 cut(s)	76
BcuI	ACTAGT	1 cut(s)	7
BfaI	CTAG	5 cut(s)	8, 159, 468, 759, 1025
BfoI	RGCGCY	1 cut(s)	486
BfrI	CTTAAG	1 cut(s)	910
BfuAI	ACCTGC	1 cut(s)	1470
BglI	GCCNNNNNGGC	1 cut(s)	981
BisI	GCNGC	9 cut(s)	123, 350, 486, 775, 963, 1338, 1341, 1344, 1367
BlsI	GCNGC	9 cut(s)	124, 351, 487, 776, 964, 1339, 1342, 1345, 1368
Bme1390I	CCNGG	2 cut(s)	166, 1271
Bme18I	GGWCC	3 cut(s)	1127, 1389, 1482
BmgBI	CACGTC	1 cut(s)	564
BmgT120I	GGNCC	7 cut(s)	287, 294, 378, 1127, 1305, 1389, 1482
BmiI	GGNNCC	4 cut(s)	559, 1049, 1307, 1391
BmrFI	CCNGG	2 cut(s)	166, 1271
BmsI	GCATC	7 cut(s)	43, 619, 904, 993, 1003, 1281, 1417
BmtI	GCTAGC	1 cut(s)	1028
BpiI	GAAGAC	3 cut(s)	162, 713, 1155
Bpu14I	TTCGAA	1 cut(s)	419
BpuEI	CTTGAG	1 cut(s)	358
BsaJI	CCNNGG	6 cut(s)	260, 290, 360, 579, 1269, 1393
Bsc4I	CCNNNNNNNGG	2 cut(s)	375, 376
Bse1I	ACTGG	2 cut(s)	931, 1282
Bse3DI	GCAATG	2 cut(s)	533, 1045
BseBI	CCWGG	2 cut(s)	166, 1271
BseDI	CCNNGG	6 cut(s)	260, 290, 360, 579, 1269, 1393
BseGI	GGATG	7 cut(s)	58, 435, 895, 1018, 1096, 1432, 1479
BseLI	CCNNNNNNNGG	2 cut(s)	375, 376
BseMI	GCAATG	2 cut(s)	533, 1045
BseNI	ACTGG	2 cut(s)	931, 1282
BseRI	GAGGAG	3 cut(s)	102, 1260, 1346
BseSI	GKGCMC	3 cut(s)	560, 576, 860
BseXI	GCAGC	8 cut(s)	109, 361, 472, 949, 1349, 1352, 1353, 1355
BsgI	GTGCAG	1 cut(s)	1352
Bsh1236I	CGCG	1 cut(s)	427
BshFI	GGCC	9 cut(s)	289, 295, 365, 380, 868, 1101, 1274, 1306, 1353
BshNI	GGYRCC	2 cut(s)	557, 1047
BslFI	GGGAC	2 cut(s)	550, 1375
BslI	CCNNNNNNNGG	2 cut(s)	375, 376
BsmFI	GGGAC	2 cut(s)	550, 1375
BsmI	GAATGC	2 cut(s)	386, 879
BsnI	GGCC	9 cut(s)	289, 295, 365, 380, 868, 1101, 1274, 1306, 1353
Bsp119I	TTCGAA	1 cut(s)	419
Bsp1286I	GDGCHC	3 cut(s)	560, 576, 860
Bsp1407I	TGTACA	1 cut(s)	1331
Bsp143I	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
Bsp19I	CCATGG	2 cut(s)	360, 1393
BspACI	CCGC	4 cut(s)	50, 357, 427, 775
BspANI	GGCC	9 cut(s)	289, 295, 365, 380, 868, 1101, 1274, 1306, 1353
BspFNI	CGCG	1 cut(s)	427
BspHI	TCATGA	1 cut(s)	79
BspLI	GGNNCC	4 cut(s)	559, 1049, 1307, 1391
BspMI	ACCTGC	1 cut(s)	1470
BspOI	GCTAGC	1 cut(s)	1028
BspPI	GGATC	3 cut(s)	156, 1230, 1329
BspT104I	TTCGAA	1 cut(s)	419
BspT107I	GGYRCC	2 cut(s)	557, 1047
BspTI	CTTAAG	1 cut(s)	910
BsrDI	GCAATG	2 cut(s)	533, 1045
BsrGI	TGTACA	1 cut(s)	1331
BsrI	ACTGG	2 cut(s)	931, 1282
BssECI	CCNNGG	6 cut(s)	260, 290, 360, 579, 1269, 1393
BssMI	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
BssT1I	CCWWGG	4 cut(s)	260, 360, 579, 1393
Bst2UI	CCWGG	2 cut(s)	166, 1271
Bst4CI	ACNGT	1 cut(s)	855
Bst6I	CTCTTC	1 cut(s)	983
BstAFI	CTTAAG	1 cut(s)	910
BstAUI	TGTACA	1 cut(s)	1331
BstBI	TTCGAA	1 cut(s)	419
BstC8I	GCNNGC	8 cut(s)	267, 341, 662, 772, 779, 815, 1026, 1410
BstDSI	CCRYGG	3 cut(s)	290, 360, 1393
BstEII	GGTNACC	1 cut(s)	583
BstF5I	GGATG	7 cut(s)	58, 435, 895, 1018, 1096, 1432, 1479
BstFNI	CGCG	1 cut(s)	427
BstH2I	RGCGCY	1 cut(s)	486
BstHHI	GCGC	1 cut(s)	485
BstKTI	GATC	6 cut(s)	79, 145, 164, 1120, 1225, 1324
BstMBI	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
BstMWI	GCNNNNNNNGC	9 cut(s)	128, 349, 544, 648, 657, 874, 981, 1280, 1343
BstNI	CCWGG	2 cut(s)	166, 1271
BstNSI	RCATGY	1 cut(s)	774
BstPI	GGTNACC	1 cut(s)	583
BstSCI	CCNGG	2 cut(s)	164, 1269
BstSLI	GKGCMC	3 cut(s)	560, 576, 860
BstUI	CGCG	1 cut(s)	427
BstV1I	GCAGC	8 cut(s)	109, 361, 472, 949, 1349, 1352, 1353, 1355
BstV2I	GAAGAC	3 cut(s)	162, 713, 1155
BstX2I	RGATCY	1 cut(s)	161
BstYI	RGATCY	1 cut(s)	161
BsuRI	GGCC	9 cut(s)	289, 295, 365, 380, 868, 1101, 1274, 1306, 1353
BtgI	CCRYGG	3 cut(s)	290, 360, 1393
BtgZI	GCGATG	3 cut(s)	367, 970, 1304
BtrI	CACGTC	1 cut(s)	564
BtsCI	GGATG	7 cut(s)	58, 435, 895, 1018, 1096, 1432, 1479
BtsI	GCAGTG	3 cut(s)	45, 513, 658
BtsIMutI	CAGTG	6 cut(s)	45, 513, 658, 860, 954, 1275
BveI	ACCTGC	1 cut(s)	1470
Cac8I	GCNNGC	8 cut(s)	267, 341, 662, 772, 779, 815, 1026, 1410
CaiI	CAGNNNCTG	1 cut(s)	485
CciI	TCATGA	1 cut(s)	79
CfoI	GCGC	1 cut(s)	485
Cfr13I	GGNCC	7 cut(s)	287, 294, 378, 1127, 1305, 1389, 1482
Csp6I	GTAC	5 cut(s)	504, 851, 1326, 1332, 1439
CviAII	CATG	5 cut(s)	80, 361, 771, 1185, 1394
CviQI	GTAC	5 cut(s)	504, 851, 1326, 1332, 1439
DpnI	GATC	6 cut(s)	78, 144, 163, 1119, 1224, 1323
DpnII	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
DraI	TTTAAA	1 cut(s)	679
EaeI	YGGCCR	2 cut(s)	1099, 1272
Eam1104I	CTCTTC	1 cut(s)	983
EarI	CTCTTC	1 cut(s)	983
EciI	GGCGGA	1 cut(s)	346
Eco130I	CCWWGG	4 cut(s)	260, 360, 579, 1393
Eco47I	GGWCC	3 cut(s)	1127, 1389, 1482
Eco57I	CTGAAG	8 cut(s)	13, 462, 540, 650, 978, 1095, 1238, 1434
Eco91I	GGTNACC	1 cut(s)	583
EcoO109I	RGGNCCY	1 cut(s)	1389
EcoO65I	GGTNACC	1 cut(s)	583
EcoRII	CCWGG	2 cut(s)	164, 1269
EcoT14I	CCWWGG	4 cut(s)	260, 360, 579, 1393
EcoT22I	ATGCAT	3 cut(s)	897, 1018, 1296
ErhI	CCWWGG	4 cut(s)	260, 360, 579, 1393
FaeI	CATG	5 cut(s)	83, 364, 774, 1188, 1397
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	2 cut(s)	550, 1375
FatI	CATG	5 cut(s)	79, 360, 770, 1184, 1393
FbaI	TGATCA	1 cut(s)	76
Fnu4HI	GCNGC	9 cut(s)	123, 350, 486, 775, 963, 1338, 1341, 1344, 1367
FokI	GGATG	7 cut(s)	65, 442, 882, 1025, 1103, 1439, 1486
Fsp4HI	GCNGC	9 cut(s)	123, 350, 486, 775, 963, 1338, 1341, 1344, 1367
FspBI	CTAG	5 cut(s)	8, 159, 468, 759, 1025
GlaI	GCGC	1 cut(s)	484
GluI	GCNGC	9 cut(s)	123, 350, 486, 775, 963, 1338, 1341, 1344, 1367
HaeII	RGCGCY	1 cut(s)	486
HaeIII	GGCC	9 cut(s)	289, 295, 365, 380, 868, 1101, 1274, 1306, 1353
HhaI	GCGC	1 cut(s)	485
Hin1II	CATG	5 cut(s)	83, 364, 774, 1188, 1397
Hin6I	GCGC	1 cut(s)	483
HinP1I	GCGC	1 cut(s)	483
HincII	GTYRAC	1 cut(s)	1077
HindII	GTYRAC	1 cut(s)	1077
HindIII	AAGCTT	1 cut(s)	662
HinfI	GANTC	5 cut(s)	434, 728, 742, 879, 1106
HpaI	GTTAAC	1 cut(s)	1077
HphI	GGTGA	2 cut(s)	577, 737
Hpy166II	GTNNAC	1 cut(s)	1077
Hpy188I	TCNGA	6 cut(s)	32, 733, 1161, 1218, 1363, 1473
Hpy188III	TCNNGA	9 cut(s)	80, 137, 159, 492, 599, 843, 1088, 1121, 1379
Hpy8I	GTNNAC	1 cut(s)	1077
Hpy99I	CGWCG	1 cut(s)	1215
HpyAV	CCTTC	5 cut(s)	17, 461, 601, 1118, 1213
HpyCH4III	ACNGT	1 cut(s)	855
HpyCH4IV	ACGT	2 cut(s)	563, 1371
HpyCH4V	TGCA	7 cut(s)	538, 685, 895, 965, 1016, 1294, 1369
HpyF10VI	GCNNNNNNNGC	9 cut(s)	128, 349, 544, 648, 657, 874, 981, 1280, 1343
HpySE526I	ACGT	2 cut(s)	563, 1371
Hsp92II	CATG	5 cut(s)	83, 364, 774, 1188, 1397
HspAI	GCGC	1 cut(s)	483
Ksp22I	TGATCA	1 cut(s)	76
KspAI	GTTAAC	1 cut(s)	1077
Kzo9I	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
Lsp1109I	GCAGC	8 cut(s)	109, 361, 472, 949, 1349, 1352, 1353, 1355
LweI	GCATC	7 cut(s)	43, 619, 904, 993, 1003, 1281, 1417
MaeI	CTAG	5 cut(s)	8, 159, 468, 759, 1025
MaeII	ACGT	2 cut(s)	563, 1371
MaeIII	GTNAC	3 cut(s)	241, 583, 725
MalI	GATC	6 cut(s)	78, 144, 163, 1119, 1224, 1323
MboI	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
MboII	GAAGA	9 cut(s)	162, 408, 718, 839, 970, 1010, 1101, 1160, 1367
MflI	RGATCY	1 cut(s)	161
MhlI	GDGCHC	3 cut(s)	560, 576, 860
MlsI	TGGCCA	2 cut(s)	1101, 1274
MluCI	AATT	4 cut(s)	217, 591, 1162, 1192
MluNI	TGGCCA	2 cut(s)	1101, 1274
MlyI	GAGTC	2 cut(s)	428, 722
Mox20I	TGGCCA	2 cut(s)	1101, 1274
Mph1103I	ATGCAT	3 cut(s)	897, 1018, 1296
MscI	TGGCCA	2 cut(s)	1101, 1274
MseI	TTAA	7 cut(s)	216, 231, 678, 911, 1020, 1076, 1522
MslI	CAYNNNNRTG	2 cut(s)	391, 1509
Msp20I	TGGCCA	2 cut(s)	1101, 1274
MspA1I	CMGCKG	1 cut(s)	1115
MspCI	CTTAAG	1 cut(s)	910
MspR9I	CCNGG	2 cut(s)	166, 1271
Mva1269I	GAATGC	2 cut(s)	386, 879
MvaI	CCWGG	2 cut(s)	166, 1271
MvnI	CGCG	1 cut(s)	427
MwoI	GCNNNNNNNGC	9 cut(s)	128, 349, 544, 648, 657, 874, 981, 1280, 1343
NcoI	CCATGG	2 cut(s)	360, 1393
NdeII	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
NheI	GCTAGC	1 cut(s)	1024
NlaIII	CATG	5 cut(s)	83, 364, 774, 1188, 1397
NlaIV	GGNNCC	4 cut(s)	559, 1049, 1307, 1391
NmuCI	GTSAC	2 cut(s)	583, 725
NsiI	ATGCAT	3 cut(s)	897, 1018, 1296
NspI	RCATGY	1 cut(s)	774
NspV	TTCGAA	1 cut(s)	419
PaeI	GCATGC	1 cut(s)	774
PagI	TCATGA	1 cut(s)	79
PctI	GAATGC	2 cut(s)	386, 879
PfeI	GAWTC	3 cut(s)	742, 879, 1106
PkrI	GCNGC	9 cut(s)	124, 351, 487, 776, 964, 1339, 1342, 1345, 1368
PleI	GAGTC	2 cut(s)	428, 722
PpsI	GAGTC	2 cut(s)	428, 722
PpuMI	RGGWCCY	1 cut(s)	1389
PsiI	TTATAA	1 cut(s)	185
Psp5II	RGGWCCY	1 cut(s)	1389
Psp6I	CCWGG	2 cut(s)	164, 1269
PspEI	GGTNACC	1 cut(s)	583
PspGI	CCWGG	2 cut(s)	164, 1269
PspN4I	GGNNCC	4 cut(s)	559, 1049, 1307, 1391
PspPI	GGNCC	7 cut(s)	287, 294, 378, 1127, 1305, 1389, 1482
PspPPI	RGGWCCY	1 cut(s)	1389
PstNI	CAGNNNCTG	1 cut(s)	485
PsuI	RGATCY	1 cut(s)	161
PvuII	CAGCTG	1 cut(s)	1115
RsaI	GTAC	5 cut(s)	505, 852, 1327, 1333, 1440
RsaNI	GTAC	5 cut(s)	504, 851, 1326, 1332, 1439
RseI	CAYNNNNRTG	2 cut(s)	391, 1509
SaqAI	TTAA	7 cut(s)	216, 231, 678, 911, 1020, 1076, 1522
SatI	GCNGC	9 cut(s)	123, 350, 486, 775, 963, 1338, 1341, 1344, 1367
Sau3AI	GATC	6 cut(s)	76, 142, 161, 1117, 1222, 1321
Sau96I	GGNCC	7 cut(s)	287, 294, 378, 1127, 1305, 1389, 1482
SchI	GAGTC	2 cut(s)	428, 722
ScrFI	CCNGG	2 cut(s)	166, 1271
SduI	GDGCHC	3 cut(s)	560, 576, 860
SfaNI	GCATC	7 cut(s)	43, 619, 904, 993, 1003, 1281, 1417
SfuI	TTCGAA	1 cut(s)	419
SinI	GGWCC	3 cut(s)	1127, 1389, 1482
SmiMI	CAYNNNNRTG	2 cut(s)	391, 1509
SmlI	CTYRAG	2 cut(s)	373, 910
SmoI	CTYRAG	2 cut(s)	373, 910
SpeI	ACTAGT	1 cut(s)	7
SphI	GCATGC	1 cut(s)	774
Sse9I	AATT	4 cut(s)	217, 591, 1162, 1192
SsiI	CCGC	4 cut(s)	50, 357, 427, 775
SspMI	CTAG	5 cut(s)	8, 159, 468, 759, 1025
StyD4I	CCNGG	2 cut(s)	164, 1269
StyI	CCWWGG	4 cut(s)	260, 360, 579, 1393
TaaI	ACNGT	1 cut(s)	855
TaiI	ACGT	2 cut(s)	566, 1374
TaqI	TCGA	5 cut(s)	21, 68, 419, 437, 871
TasI	AATT	4 cut(s)	217, 591, 1162, 1192
TatI	WGTACW	2 cut(s)	1331, 1438
TauI	GCSGC	1 cut(s)	777
TfiI	GAWTC	3 cut(s)	742, 879, 1106
Tru1I	TTAA	7 cut(s)	216, 231, 678, 911, 1020, 1076, 1522
Tru9I	TTAA	7 cut(s)	216, 231, 678, 911, 1020, 1076, 1522
TscAI	CASTG	6 cut(s)	52, 520, 658, 860, 961, 1282
TseFI	GTSAC	2 cut(s)	583, 725
TseI	GCWGC	8 cut(s)	122, 349, 485, 962, 1337, 1340, 1343, 1366
Tsp45I	GTSAC	2 cut(s)	583, 725
TspDTI	ATGAA	4 cut(s)	17, 85, 1156, 1161
TspGWI	ACGGA	1 cut(s)	1199
TspRI	CASTG	6 cut(s)	52, 520, 658, 860, 961, 1282
Vha464I	CTTAAG	1 cut(s)	910
VpaK11BI	GGWCC	3 cut(s)	1127, 1389, 1482
XapI	RAATTY	1 cut(s)	1162
XbaI	TCTAGA	1 cut(s)	158
XceI	RCATGY	1 cut(s)	774
XcmI	CCANNNNNNNNNTGG	1 cut(s)	641
XspI	CTAG	5 cut(s)	8, 159, 468, 759, 1025
Zsp2I	ATGCAT	3 cut(s)	897, 1018, 1296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.