Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Reverse (-)

55858980 .. 55861850

Gene Structure 2871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0465900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGCTATTAATCCAGACGACAGCTTCATCATAAGCATTACAGCAGGTTACACTTTAGACAGTAAAGGGAGGCTGCAATCTCCTAAGACTCCTATGAACAGTGGAGGACATTCAATATTGTCAGAGACAAAATGGCCTACCTTTAAGGAATTTTTTGACCCCCAGGGGGCCTTCATTGCAATGTGGTATAAGATATTTGTGATTTCATGTCTGATTTCAGTAACCGCAGACCCTTTGTTCTTCTACATCCCCTACATCAACAAAGATAAAAAGTGCATTGATGGGGACAAGAGGGTGAGAACTGCAGCTCTAGTCCTCCGATCACTCACCGATATGACTTTCATATTGCATATTATACATGAAATTAGGGTTAGTACCAACACTGTGGTGTCAGAGATTTCAAAAAGAGGAAAGCCAGGTTGGCCATGGAAAAAGGCAGCGTTACTTGGCTTTGCCAAGGCAATATCTCAGAAGATGTCCTGGTTATCTATCTCCATCATTATAGACTTTATAGCCATTCTTCCGATCCCACAAGTGGCGCTGTTGGTATTCTTTCTGAAAATGGATGGCTCAGATTACAGAAGGAAGATTTTAAACGGGTTCCTGCTCTTTCAATATATGCCAAAGATTTATAGAATCTACCTTTCGTGTAAAGAACTTAAACAAACCGGAATATGGGCTAGAGGTGCATTCAATATTTTTCTCTACATCCTCGCTAGTCATGTACTTGGAGCCTTTTGGTATTTCCTTTCTATTCAACAAGAGACATCATGCTGGCATAAGGCTTGTGAACAACATCCTGATACCAAAAGATGTATATCAACTTACTACTGTGATGACAGACCTACAAATCCACAATATATTAGTAATATTACACTCCTGGATGAAAATTGCCCGGTAAATCCATCAAATGCAACAAAATTTAATTTCGGAATGTTCCTTAGTGCCCTTGAGTCCGGTAGCACGCACTCAACATATTTTCCCAAGAGGTTCTTTTACTCTTTCTGGTGGGGTCTGCGAAATCTAAGTTCTCTTGGTCAAAATTTGGAAACGAGTACCTATGTGTGGGAAAACTGCTTCGCAATCGTTATATCTCTAATTGGTTTGCTACTATTTTTGTATCTTATTGGAAATGTACAGACGTATATACAGTTGGCAACTACGAAATCGGAAGAGATAAGACAGAAGATGATAATGAAAGAGCTAGAGATACAATGGTGGATGTCCAGAAATCATCTCCCCAACGATATGAAGACAGTGATCATCGAAAACGTAAGACAGAAATTGGAAGAAAACAAAGATGTTCATGTGGAGAATCTACTCTCTATTCTTCCCCGGAAGGACAGAAGGTCCATAAAGCGCCTTCTCTGCATGGACTCACTTAAGAAAGTACCGATGCTTCGATATATGGATGAAAGTGTGTTAAAACTCATCTGCGACAATCTGAAACCAGTAATCTACACAGAGAACAGTTATGTAATTCGAGCAGGAGAACCACTTGATCTAATGCTCTTCAACGCAGAAGGCATTATATGGACTTACACAACAAGTACTGATGGTTCAATAAAATTGGGTTCCTCAATCACACAGTGTATTGGTAAAGGTGATTTCTATGGAGAAGAACTTTTGAGTTGGGCTTCCTCATACATGTCCTTCTCCGACCTCCCTATCTCGACCCAAAATGTAAAATGCCATACAAAAGTTGAAGCCTTTTCTCTCATGGCAAAGGACTTGAAGGCTGTGGTCTCCAAATTCTGGTGGCATTTCAGCAAGGCGGTTCCCGATTTGAACAGAAACAATTCTCAGCTGGAGGAATTGGCTCTTTCTTCCCTAAGAGCCCGTCGCCGCAAACGATCAAAGAAGCATATAAAAGCTCCTCAGTTGTCTACTTACTCCCAAGAACTTGGGTACCTGCGGCTGTACCCTGTTAATCGTTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

646

Amino Acids

74.52

Weight (kDa)

9.27

Isoelectric Point (pI)

48.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	62 - 390	5.3e-12	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	35, 1920
Acc65I	GGTACC	1 cut(s)	1908
AccB1I	GGYRCC	1 cut(s)	1908
AccB7I	CCANNNNNTGG	1 cut(s)	1755
AccI	GTMKAC	1 cut(s)	1886
AciI	CCGC	4 cut(s)	225, 1775, 1846, 1915
AclWI	GGATC	1 cut(s)	520
AcoI	YGGCCR	1 cut(s)	422
AcsI	RAATTY	4 cut(s)	149, 920, 1042, 1751
AdeI	CACNNNGTG	1 cut(s)	1590
AfaI	GTAC	8 cut(s)	376, 726, 1057, 1137, 1392, 1552, 1910, 1922
AfiI	CCNNNNNNNGG	5 cut(s)	166, 535, 675, 1065, 1755
AflII	CTTAAG	1 cut(s)	1382
AflIII	ACRYGT	1 cut(s)	1647
AhdI	GACNNNNNGTC	1 cut(s)	1348
AjnI	CCWGG	4 cut(s)	162, 415, 479, 879
AjuI	GAANNNNNNNTTGG	2 cut(s)	403, 435
AleI	CACNNNNGTG	1 cut(s)	386
AluBI	AGCT	5 cut(s)	24, 308, 1204, 1807, 1874
AluI	AGCT	5 cut(s)	24, 308, 1204, 1807, 1874
Alw26I	GTCTC	3 cut(s)	119, 758, 1750
AlwI	GGATC	1 cut(s)	520
AoxI	GGCC	3 cut(s)	134, 168, 422
ApeKI	GCWGC	3 cut(s)	73, 305, 437
ApoI	RAATTY	4 cut(s)	149, 920, 1042, 1751
AseI	ATTAAT	1 cut(s)	9
Asp700I	GAANNNNTTC	1 cut(s)	1798
Asp718I	GGTACC	1 cut(s)	1908
AspLEI	GCGC	2 cut(s)	541, 1362
AspS9I	GGNCC	2 cut(s)	168, 1350
AsuC2I	CCSGG	2 cut(s)	896, 1336
AsuHPI	GGTGA	3 cut(s)	307, 319, 1616
AvaII	GGWCC	1 cut(s)	1350
BaeGI	GKGCMC	1 cut(s)	949
BaeI	ACNNNNGTAYC	4 cut(s)	1202, 1235, 1892, 1925
BalI	TGGCCA	1 cut(s)	424
BanI	GGYRCC	1 cut(s)	1908
BanII	GRGCYC	1 cut(s)	1840
BarI	GAAGNNNNNNTAC	2 cut(s)	1383, 1415
BbsI	GAAGAC	1 cut(s)	1259
BbvI	GCAGC	3 cut(s)	60, 317, 449
BccI	CCATC	5 cut(s)	275, 503, 560, 913, 1550
BciT130I	CCWGG	4 cut(s)	164, 417, 481, 881
BclI	TGATCA	1 cut(s)	1260
BcnI	CCSGG	2 cut(s)	896, 1336
BcoDI	GTCTC	3 cut(s)	119, 758, 1750
BfaI	CTAG	4 cut(s)	311, 681, 717, 1205
BfmI	CTRYAG	1 cut(s)	303
BfoI	RGCGCY	2 cut(s)	542, 1363
BfrI	CTTAAG	1 cut(s)	1382
BfuAI	ACCTGC	2 cut(s)	35, 1920
BglI	GCCNNNNNGGC	1 cut(s)	421
BisI	GCNGC	5 cut(s)	74, 306, 438, 1846, 1916
BlsI	GCNGC	5 cut(s)	75, 307, 439, 1847, 1917
BmcAI	AGTACT	1 cut(s)	1552
Bme1390I	CCNGG	6 cut(s)	164, 417, 481, 881, 896, 1336
Bme18I	GGWCC	1 cut(s)	1350
BmeRI	GACNNNNNGTC	1 cut(s)	1348
BmgT120I	GGNCC	2 cut(s)	168, 1350
BmiI	GGNNCC	6 cut(s)	169, 602, 733, 1576, 1779, 1910
BmrFI	CCNGG	6 cut(s)	164, 417, 481, 881, 896, 1336
BmsI	GCATC	1 cut(s)	1386
BpiI	GAAGAC	1 cut(s)	1259
BpmI	CTGGAG	1 cut(s)	1829
BpuEI	CTTGAG	1 cut(s)	971
BpuMI	CCSGG	2 cut(s)	896, 1336
BsaBI	GATNNNNATC	1 cut(s)	817
BsaI	GGTCTC	1 cut(s)	1750
BsaJI	CCNNGG	5 cut(s)	162, 163, 425, 456, 1334
BsaWI	WCCGGW	2 cut(s)	668, 956
Bsc4I	CCNNNNNNNGG	5 cut(s)	166, 535, 675, 1065, 1755
Bse1I	ACTGG	1 cut(s)	1451
Bse3DI	GCAATG	2 cut(s)	174, 186
Bse8I	GATNNNNATC	1 cut(s)	817
BseBI	CCWGG	4 cut(s)	164, 417, 481, 881
BseDI	CCNNGG	5 cut(s)	162, 163, 425, 456, 1334
BseGI	GGATG	7 cut(s)	246, 571, 708, 796, 889, 1227, 1417
BseJI	GATNNNNATC	1 cut(s)	817
BseLI	CCNNNNNNNGG	5 cut(s)	166, 535, 675, 1065, 1755
BseMI	GCAATG	2 cut(s)	174, 186
BseMII	CTCAG	4 cut(s)	482, 585, 1817, 1892
BseNI	ACTGG	1 cut(s)	1451
BseRI	GAGGAG	1 cut(s)	1866
BseSI	GKGCMC	1 cut(s)	949
BseXI	GCAGC	3 cut(s)	60, 317, 449
BshFI	GGCC	3 cut(s)	136, 170, 424
BshNI	GGYRCC	1 cut(s)	1908
BsiSI	CCGG	4 cut(s)	669, 896, 957, 1336
BslFI	GGGAC	1 cut(s)	299
BslI	CCNNNNNNNGG	5 cut(s)	166, 535, 675, 1065, 1755
BsmAI	GTCTC	3 cut(s)	119, 758, 1750
BsmFI	GGGAC	1 cut(s)	299
BsmI	GAATGC	1 cut(s)	689
BsnI	GGCC	3 cut(s)	136, 170, 424
Bso31I	GGTCTC	1 cut(s)	1750
Bsp1286I	GDGCHC	2 cut(s)	949, 1840
Bsp1407I	TGTACA	1 cut(s)	1135
Bsp143I	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
Bsp19I	CCATGG	1 cut(s)	425
BspACI	CCGC	4 cut(s)	225, 1775, 1846, 1915
BspANI	GGCC	3 cut(s)	136, 170, 424
BspCNI	CTCAG	4 cut(s)	481, 584, 1816, 1891
BspLI	GGNNCC	6 cut(s)	169, 602, 733, 1576, 1779, 1910
BspMAI	CTGCAG	1 cut(s)	307
BspMI	ACCTGC	2 cut(s)	35, 1920
BspPI	GGATC	1 cut(s)	520
BspQI	GCTCTTC	1 cut(s)	1517
BspT107I	GGYRCC	1 cut(s)	1908
BspTI	CTTAAG	1 cut(s)	1382
BspTNI	GGTCTC	1 cut(s)	1750
BsrDI	GCAATG	2 cut(s)	174, 186
BsrGI	TGTACA	1 cut(s)	1135
BsrI	ACTGG	1 cut(s)	1451
BssECI	CCNNGG	5 cut(s)	162, 163, 425, 456, 1334
BssMI	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
BssT1I	CCWWGG	2 cut(s)	425, 456
Bst2UI	CCWGG	4 cut(s)	164, 417, 481, 881
Bst4CI	ACNGT	8 cut(s)	62, 101, 385, 833, 1152, 1258, 1472, 1590
Bst6I	CTCTTC	2 cut(s)	1167, 1517
BstAFI	CTTAAG	1 cut(s)	1382
BstAUI	TGTACA	1 cut(s)	1135
BstC8I	GCNNGC	2 cut(s)	776, 965
BstDEI	CTNAG	8 cut(s)	84, 468, 571, 941, 1025, 1803, 1832, 1878
BstDSI	CCRYGG	1 cut(s)	425
BstF5I	GGATG	7 cut(s)	246, 571, 708, 796, 889, 1227, 1417
BstH2I	RGCGCY	2 cut(s)	542, 1363
BstHHI	GCGC	2 cut(s)	541, 1362
BstKTI	GATC	5 cut(s)	323, 528, 1263, 1504, 1856
BstMAI	GTCTC	3 cut(s)	119, 758, 1750
BstMBI	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
BstMWI	GCNNNNNNNGC	4 cut(s)	176, 421, 686, 1368
BstNI	CCWGG	4 cut(s)	164, 417, 481, 881
BstNSI	RCATGY	1 cut(s)	1651
BstSCI	CCNGG	6 cut(s)	162, 415, 479, 879, 894, 1334
BstSFI	CTRYAG	1 cut(s)	303
BstSLI	GKGCMC	1 cut(s)	949
BstV1I	GCAGC	3 cut(s)	60, 317, 449
BstV2I	GAAGAC	1 cut(s)	1259
BstXI	CCANNNNNNTGG	2 cut(s)	385, 1904
BsuRI	GGCC	3 cut(s)	136, 170, 424
BtgI	CCRYGG	1 cut(s)	425
BtsCI	GGATG	7 cut(s)	246, 571, 708, 796, 889, 1227, 1417
BtsIMutI	CAGTG	4 cut(s)	106, 381, 1263, 1595
BveI	ACCTGC	2 cut(s)	35, 1920
Cac8I	GCNNGC	2 cut(s)	776, 965
CfoI	GCGC	2 cut(s)	541, 1362
Cfr13I	GGNCC	2 cut(s)	168, 1350
Csp6I	GTAC	8 cut(s)	375, 725, 1056, 1136, 1391, 1551, 1909, 1921
CviAII	CATG	9 cut(s)	207, 359, 426, 722, 771, 1307, 1372, 1648, 1720
CviQI	GTAC	8 cut(s)	375, 725, 1056, 1136, 1391, 1551, 1909, 1921
DdeI	CTNAG	8 cut(s)	84, 468, 571, 941, 1025, 1803, 1832, 1878
DpnI	GATC	5 cut(s)	322, 527, 1262, 1503, 1855
DpnII	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
DraI	TTTAAA	1 cut(s)	594
DraIII	CACNNNGTG	1 cut(s)	1590
DriI	GACNNNNNGTC	1 cut(s)	1348
EaeI	YGGCCR	1 cut(s)	422
Eam1104I	CTCTTC	2 cut(s)	1167, 1517
Eam1105I	GACNNNNNGTC	1 cut(s)	1348
EarI	CTCTTC	2 cut(s)	1167, 1517
Eco130I	CCWWGG	2 cut(s)	425, 456
Eco24I	GRGCYC	1 cut(s)	1840
Eco31I	GGTCTC	1 cut(s)	1750
Eco47I	GGWCC	1 cut(s)	1350
EcoO109I	RGGNCCY	1 cut(s)	168
EcoRII	CCWGG	4 cut(s)	162, 415, 479, 879
EcoT14I	CCWWGG	2 cut(s)	425, 456
EcoT38I	GRGCYC	1 cut(s)	1840
ErhI	CCWWGG	2 cut(s)	425, 456
FaeI	CATG	9 cut(s)	210, 362, 429, 725, 774, 1310, 1375, 1651, 1723
FalI	AAGNNNNNCTT	2 cut(s)	977, 1009
FaqI	GGGAC	1 cut(s)	299
FatI	CATG	9 cut(s)	206, 358, 425, 721, 770, 1306, 1371, 1647, 1719
FbaI	TGATCA	1 cut(s)	1260
FblI	GTMKAC	1 cut(s)	1886
Fnu4HI	GCNGC	5 cut(s)	74, 306, 438, 1846, 1916
FokI	GGATG	7 cut(s)	233, 578, 695, 783, 896, 1234, 1424
FriOI	GRGCYC	1 cut(s)	1840
Fsp4HI	GCNGC	5 cut(s)	74, 306, 438, 1846, 1916
FspBI	CTAG	4 cut(s)	311, 681, 717, 1205
GlaI	GCGC	2 cut(s)	540, 1361
GluI	GCNGC	5 cut(s)	74, 306, 438, 1846, 1916
GsuI	CTGGAG	1 cut(s)	1829
HaeII	RGCGCY	2 cut(s)	542, 1363
HaeIII	GGCC	3 cut(s)	136, 170, 424
HapII	CCGG	4 cut(s)	669, 896, 957, 1336
HhaI	GCGC	2 cut(s)	541, 1362
Hin1II	CATG	9 cut(s)	210, 362, 429, 725, 774, 1310, 1375, 1651, 1723
Hin6I	GCGC	2 cut(s)	539, 1360
HinP1I	GCGC	2 cut(s)	539, 1360
HinfI	GANTC	5 cut(s)	88, 636, 953, 1315, 1376
HpaII	CCGG	4 cut(s)	669, 896, 957, 1336
HphI	GGTGA	3 cut(s)	307, 319, 1616
Hpy166II	GTNNAC	2 cut(s)	791, 1887
Hpy188III	TCNNGA	5 cut(s)	14, 800, 1227, 1672, 1781
Hpy8I	GTNNAC	2 cut(s)	791, 1887
Hpy99I	CGWCG	1 cut(s)	1845
HpyAV	CCTTC	8 cut(s)	181, 576, 1333, 1341, 1373, 1517, 1663, 1729
HpyCH4III	ACNGT	8 cut(s)	62, 101, 385, 833, 1152, 1258, 1472, 1590
HpyCH4IV	ACGT	2 cut(s)	1142, 1272
HpyCH4V	TGCA	8 cut(s)	76, 179, 276, 305, 349, 689, 914, 1371
HpyF10VI	GCNNNNNNNGC	4 cut(s)	176, 421, 686, 1368
HpyF3I	CTNAG	8 cut(s)	84, 468, 571, 941, 1025, 1803, 1832, 1878
HpySE526I	ACGT	2 cut(s)	1142, 1272
Hsp92II	CATG	9 cut(s)	210, 362, 429, 725, 774, 1310, 1375, 1651, 1723
HspAI	GCGC	2 cut(s)	539, 1360
KpnI	GGTACC	1 cut(s)	1912
Ksp22I	TGATCA	1 cut(s)	1260
Kzo9I	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
LguI	GCTCTTC	1 cut(s)	1517
LmnI	GCTCC	2 cut(s)	731, 1879
Lsp1109I	GCAGC	3 cut(s)	60, 317, 449
LweI	GCATC	1 cut(s)	1386
MaeI	CTAG	4 cut(s)	311, 681, 717, 1205
MaeII	ACGT	2 cut(s)	1142, 1272
MaeIII	GTNAC	3 cut(s)	47, 220, 441
MalI	GATC	5 cut(s)	322, 527, 1262, 1503, 1855
MboI	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
MhlI	GDGCHC	2 cut(s)	949, 1840
MlsI	TGGCCA	1 cut(s)	424
MluNI	TGGCCA	1 cut(s)	424
MlyI	GAGTC	3 cut(s)	82, 962, 1370
MmeI	TCCRAC	1 cut(s)	1683
Mox20I	TGGCCA	1 cut(s)	424
MroXI	GAANNNNTTC	1 cut(s)	1798
MscI	TGGCCA	1 cut(s)	424
MseI	TTAA	8 cut(s)	9, 144, 593, 660, 924, 1383, 1424, 1929
MslI	CAYNNNNRTG	3 cut(s)	179, 332, 386
Msp20I	TGGCCA	1 cut(s)	424
MspA1I	CMGCKG	1 cut(s)	1807
MspCI	CTTAAG	1 cut(s)	1382
MspI	CCGG	4 cut(s)	669, 896, 957, 1336
MspR9I	CCNGG	6 cut(s)	164, 417, 481, 881, 896, 1336
Mva1269I	GAATGC	1 cut(s)	689
MvaI	CCWGG	4 cut(s)	164, 417, 481, 881
MwoI	GCNNNNNNNGC	4 cut(s)	176, 421, 686, 1368
NciI	CCSGG	2 cut(s)	896, 1336
NcoI	CCATGG	1 cut(s)	425
NdeII	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
NlaIII	CATG	9 cut(s)	210, 362, 429, 725, 774, 1310, 1375, 1651, 1723
NlaIV	GGNNCC	6 cut(s)	169, 602, 733, 1576, 1779, 1910
NspI	RCATGY	1 cut(s)	1651
OliI	CACNNNNGTG	1 cut(s)	386
PasI	CCCWGGG	1 cut(s)	163
PciI	ACATGT	1 cut(s)	1647
PciSI	GCTCTTC	1 cut(s)	1517
PcsI	WCGNNNNNNNCGW	1 cut(s)	1849
PctI	GAATGC	1 cut(s)	689
PdmI	GAANNNNTTC	1 cut(s)	1798
PfeI	GAWTC	2 cut(s)	636, 1315
PflMI	CCANNNNNTGG	1 cut(s)	1755
PfoI	TCCNGGA	1 cut(s)	879
PkrI	GCNGC	5 cut(s)	75, 307, 439, 1847, 1917
PleI	GAGTC	3 cut(s)	82, 961, 1370
PpsI	GAGTC	3 cut(s)	82, 961, 1370
PscI	ACATGT	1 cut(s)	1647
PshBI	ATTAAT	1 cut(s)	9
Psp6I	CCWGG	4 cut(s)	162, 415, 479, 879
PspGI	CCWGG	4 cut(s)	162, 415, 479, 879
PspN4I	GGNNCC	6 cut(s)	169, 602, 733, 1576, 1779, 1910
PspPI	GGNCC	2 cut(s)	168, 1350
PsrI	GAACNNNNNNTAC	2 cut(s)	1543, 1575
PstI	CTGCAG	1 cut(s)	307
PvuII	CAGCTG	1 cut(s)	1807
RsaI	GTAC	8 cut(s)	376, 726, 1057, 1137, 1392, 1552, 1910, 1922
RsaNI	GTAC	8 cut(s)	375, 725, 1056, 1136, 1391, 1551, 1909, 1921
RseI	CAYNNNNRTG	3 cut(s)	179, 332, 386
SapI	GCTCTTC	1 cut(s)	1517
SaqAI	TTAA	8 cut(s)	9, 144, 593, 660, 924, 1383, 1424, 1929
SatI	GCNGC	5 cut(s)	74, 306, 438, 1846, 1916
Sau3AI	GATC	5 cut(s)	320, 525, 1260, 1501, 1853
Sau96I	GGNCC	2 cut(s)	168, 1350
ScaI	AGTACT	1 cut(s)	1552
SchI	GAGTC	3 cut(s)	82, 962, 1370
ScrFI	CCNGG	6 cut(s)	164, 417, 481, 881, 896, 1336
SduI	GDGCHC	2 cut(s)	949, 1840
SfaNI	GCATC	1 cut(s)	1386
SfcI	CTRYAG	1 cut(s)	303
SinI	GGWCC	1 cut(s)	1350
SmiMI	CAYNNNNRTG	3 cut(s)	179, 332, 386
SmlI	CTYRAG	2 cut(s)	950, 1382
SmoI	CTYRAG	2 cut(s)	950, 1382
SsiI	CCGC	4 cut(s)	225, 1775, 1846, 1915
SspI	AATATT	3 cut(s)	117, 697, 871
SspMI	CTAG	4 cut(s)	311, 681, 717, 1205
StyD4I	CCNGG	6 cut(s)	162, 415, 479, 879, 894, 1334
StyI	CCWWGG	2 cut(s)	425, 456
TaaI	ACNGT	8 cut(s)	62, 101, 385, 833, 1152, 1258, 1472, 1590
TaiI	ACGT	2 cut(s)	1145, 1275
TaqI	TCGA	4 cut(s)	1266, 1402, 1483, 1673
TatI	WGTACW	3 cut(s)	724, 1135, 1550
TauI	GCSGC	2 cut(s)	1848, 1918
TfiI	GAWTC	2 cut(s)	636, 1315
Tru1I	TTAA	8 cut(s)	9, 144, 593, 660, 924, 1383, 1424, 1929
Tru9I	TTAA	8 cut(s)	9, 144, 593, 660, 924, 1383, 1424, 1929
TscAI	CASTG	4 cut(s)	106, 388, 1263, 1595
TseI	GCWGC	3 cut(s)	73, 305, 437
TspRI	CASTG	4 cut(s)	106, 388, 1263, 1595
Van91I	CCANNNNNTGG	1 cut(s)	1755
Vha464I	CTTAAG	1 cut(s)	1382
VpaK11BI	GGWCC	1 cut(s)	1350
VspI	ATTAAT	1 cut(s)	9
XapI	RAATTY	4 cut(s)	149, 920, 1042, 1751
XceI	RCATGY	1 cut(s)	1651
XcmI	CCANNNNNNNNNTGG	1 cut(s)	423
XmiI	GTMKAC	1 cut(s)	1886
XmnI	GAANNNNTTC	1 cut(s)	1798
XspI	CTAG	4 cut(s)	311, 681, 717, 1205
ZrmI	AGTACT	1 cut(s)	1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.