Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Forward (+)

50923754 .. 50926873

Gene Structure 3120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019368

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGATGCGAAGGACCAACTGGGAGGTTCTGTTGGTGATCAGAATGGGGATACGGATCGGTTTCCGGATGGTATGCGTGTCCTTGCGGTTGATGACGACCTAACTTATCTCAAATTCTTGGAGGCTACGCTGCGTAAATGCAATTATGAGGTAACTACTGCTAATCATGCATACGAGGCACTCCAAATTTTGAGGGAAAACACAAACAAGTTTGACCTGGTAATCAGTGATGTACAGATGCCAGATATGGATGGCTTTCAGCTCCTAAAGCTCTTAGGGCACGAAATGGACCTACCTGTAATCATGGTGTCAGGCAATGGTGATACTGAGCTTATGAAGAAGGGAATCTCCCATGGTGCTTGTTGCTATTTGGTGAAACCTGTTAACATTGAAGTGTTCAAGACTATTTGGCAACATGTCTTCCGGAGAAAAAAGTTGAACTCTAAGGACCAATGTAAGTCTTGTGATCAAGACAAGGTCTGCAAAGGAACAGGAGAAGGTGAAGAAGGGATGTCAGCAGCAAGTAGTTCAGATAAGAATGGAAAACACAAAAGAAAAAGGAAGCACCAAAAGGAAGATGATGAAGAAGGCGAAGATGATGAAGATGAGAATGAGGAACCATCAACCCAGAAGAAGCGTCGGATAGTTTGGTCCGAAGAGCTGCACAACAAGTTTCTTGACGTCTTCTATTATCTGGGACCGGAAAGTGAGGAACAACTTAAAAAAGGCGGCAGTAAGAAGGAGAAGCAGAGGGCTAGCATGGTTGTTGATCTGGGGAGAAAAGATTCTTCTTGCATGCTGCACACGGGTCCAGTTGATAAATCTGGAGGGAGGCTCTCAAATCCTGCTCCCTTATCCTCGTACATACCTCCGCAGATGCTTTCGAGATCAAACTCCCCCACTGATTTTAACATGACTAGAATTAATCCTTCTTCTCATCCGCTGCGACCTGGTCAGCCCCAAAATTTGTGCAACTCTATCAATAATGTAGCAAACCTCCAGCCAAGTGTGCTTACAAACCAAAGCCGAAACCTTTTTCAAGTATCTCAGGCACCAGTAGAGAAAAATCAATTGCAGCAGAAAAATTCTACCATTGACATCCGACAGTCCACTCCCAATAATAATGGTTCCACAACTACTTTTCCATATAAAGGATTGCCTGGCAGCTCAGTCGGTTATGATTGTAATACTTCAATGTTACAAGGCAATCCACAGCAAAAACATGGGACGCTAGAGTTTGGAAATCAGTCTTCTCTTAGAGTGAATTCATTGAATCCCCAATCATTTGACAATGCCCTTTGTAGATCGTCCAATTTTCTGAATTTTCTGGATAACGATGGATATGGTGAAAGTTGGCAGCGTGGTATGCAGGGTTGTGGTCAATTATACCAATTTCCATCAACTGCTTTGCTCAGGAGTGAGGATTCCAATTTTGGTCAATTTCCTGCTAATAACTTGGGTGCTTCTTCAAGTACACCTCAGATCGGGAACACTCCAAATGACTTATCTTCTGTAAGTGCATTTTCAGCTTCTGTGGAGGAACTAAGAGAAAACATACATACAAAAAACCAAGGCCATGTTGTACCAACCATGTATTGCACGCCAAATCAATGGTGGGAAGATCATAAGCAAGATTACAACCACAACTGGAACCTTTCTTCCATCGTTTCTAGCAATGGTGTTGTAGATCCACTAAGCCGGACCTTGGACCAAAATGATGCAGTTTGCAGTAGAAGCAATTCATCTTTGTTTGACCAGTTTAATGGAGGAAATAGAACTATCGTACAGAGCCTTGAGGTTGAGAATTCGACCATGCATACAAAGATTGATCCTAATGAGGATTACATATTATTAGAGCAAGCAAAGTCCAATGATGGCTTGGTTCAAAATAGTCTTGAATCACTGGATAACCAGGTTGAATTGGAGAATGAGTTTGATTTACTGGATGGAGAGTTTGGATTTGATGCAATACAGGAACAAAAGGAGAATGACGAGTATGATTTACTGGATGGAGGGTTTCGATTTGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

678

Amino Acids

75.66

Weight (kDa)

4.96

Isoelectric Point (pI)

48.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	27 - 133	4.6e-23	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	684
AccB1I	GGYRCC	1 cut(s)	1051
AccIII	TCCGGA	2 cut(s)	64, 423
AciI	CCGC	4 cut(s)	86, 729, 872, 941
AclWI	GGATC	3 cut(s)	63, 1682, 1823
AcsI	RAATTY	7 cut(s)	113, 186, 964, 1084, 1264, 1321, 1804
AcyI	GRCGYC	1 cut(s)	681
AfaI	GTAC	5 cut(s)	234, 863, 1474, 1584, 1785
AfiI	CCNNNNNNNGG	3 cut(s)	1151, 1484, 1705
AflIII	ACRYGT	1 cut(s)	415
AjnI	CCWGG	4 cut(s)	216, 949, 1159, 1911
AloI	GAACNNNNNNTCC	2 cut(s)	1643, 1675
AluBI	AGCT	7 cut(s)	262, 271, 331, 661, 1167, 1529, 2030
AluI	AGCT	7 cut(s)	262, 271, 331, 661, 1167, 1529, 2030
AlwI	GGATC	3 cut(s)	63, 1682, 1823
AlwNI	CAGNNNCTG	1 cut(s)	1532
Aor13HI	TCCGGA	2 cut(s)	64, 423
AoxI	GGCC	1 cut(s)	1573
ApeKI	GCWGC	8 cut(s)	130, 518, 661, 799, 943, 1075, 1164, 1357
ApoI	RAATTY	7 cut(s)	113, 186, 964, 1084, 1264, 1321, 1804
AseI	ATTAAT	1 cut(s)	924
Asp700I	GAANNNNTTC	2 cut(s)	784, 1738
AspS9I	GGNCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
AsuHPI	GGTGA	5 cut(s)	47, 332, 385, 512, 1358
AsuNHI	GCTAGC	1 cut(s)	755
AvaII	GGWCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
BaeGI	GKGCMC	1 cut(s)	282
BanI	GGYRCC	1 cut(s)	1051
BbsI	GAAGAC	3 cut(s)	412, 676, 1242
BbvI	GCAGC	8 cut(s)	117, 530, 648, 786, 930, 1087, 1176, 1369
BccI	CCATC	9 cut(s)	62, 245, 628, 1331, 1405, 1670, 1868, 1940, 2003
BcgI	CGANNNNNNTGC	2 cut(s)	1153, 1187
BciT130I	CCWGG	4 cut(s)	218, 951, 1161, 1913
BciVI	GTATCC	1 cut(s)	43
BclI	TGATCA	2 cut(s)	37, 466
BfaI	CTAG	4 cut(s)	756, 918, 1232, 1671
BfuI	GTATCC	1 cut(s)	43
BisI	GCNGC	9 cut(s)	131, 519, 662, 730, 800, 944, 1076, 1165, 1358
BlsI	GCNGC	9 cut(s)	132, 520, 663, 731, 801, 945, 1077, 1166, 1359
Bme1390I	CCNGG	4 cut(s)	218, 951, 1161, 1913
Bme18I	GGWCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
BmgT120I	GGNCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
BmiI	GGNNCC	6 cut(s)	618, 699, 810, 1053, 1129, 1652
BmrFI	CCNGG	4 cut(s)	218, 951, 1161, 1913
BmrI	ACTGGG	1 cut(s)	29
BmsI	GCATC	4 cut(s)	228, 867, 1708, 1954
BmtI	GCTAGC	1 cut(s)	759
BmuI	ACTGGG	1 cut(s)	29
BpiI	GAAGAC	3 cut(s)	412, 676, 1242
BplI	GAGNNNNNCTC	2 cut(s)	819, 851
BpmI	CTGGAG	2 cut(s)	846, 983
Bpu10I	CCTNAGC	1 cut(s)	1412
BpuEI	CTTGAG	1 cut(s)	1814
BsaBI	GATNNNNATC	1 cut(s)	54
BsaHI	GRCGYC	1 cut(s)	681
BsaJI	CCNNGG	3 cut(s)	352, 1570, 1704
BsaWI	WCCGGW	3 cut(s)	64, 423, 700
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 1916, 1946
Bsc4I	CCNNNNNNNGG	3 cut(s)	1151, 1484, 1705
Bse1I	ACTGG	8 cut(s)	24, 812, 1055, 1652, 1756, 1908, 1947, 2010
Bse3DI	GCAATG	2 cut(s)	322, 1681
Bse8I	GATNNNNATC	1 cut(s)	54
BseAI	TCCGGA	2 cut(s)	64, 423
BseBI	CCWGG	4 cut(s)	218, 951, 1161, 1913
BseDI	CCNNGG	3 cut(s)	352, 1570, 1704
BseGI	GGATG	8 cut(s)	10, 73, 256, 516, 937, 1098, 1951, 2014
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	3 cut(s)	1151, 1484, 1705
BseMI	GCAATG	2 cut(s)	322, 1681
BseMII	CTCAG	5 cut(s)	318, 1061, 1182, 1426, 1493
BseNI	ACTGG	8 cut(s)	24, 812, 1055, 1652, 1756, 1908, 1947, 2010
BseSI	GKGCMC	1 cut(s)	282
BseXI	GCAGC	8 cut(s)	117, 530, 648, 786, 930, 1087, 1176, 1369
BsgI	GTGCAG	2 cut(s)	647, 785
BshFI	GGCC	1 cut(s)	1575
BshNI	GGYRCC	1 cut(s)	1051
BsiSI	CCGG	4 cut(s)	65, 424, 701, 1699
BslFI	GGGAC	2 cut(s)	711, 1240
BslI	CCNNNNNNNGG	3 cut(s)	1151, 1484, 1705
BsmFI	GGGAC	2 cut(s)	711, 1240
BsnI	GGCC	1 cut(s)	1575
Bsp1286I	GDGCHC	1 cut(s)	282
Bsp13I	TCCGGA	2 cut(s)	64, 423
Bsp1407I	TGTACA	1 cut(s)	232
Bsp19I	CCATGG	1 cut(s)	352
BspACI	CCGC	4 cut(s)	86, 729, 872, 941
BspANI	GGCC	1 cut(s)	1575
BspCNI	CTCAG	5 cut(s)	319, 1060, 1181, 1425, 1492
BspEI	TCCGGA	2 cut(s)	64, 423
BspLI	GGNNCC	6 cut(s)	618, 699, 810, 1053, 1129, 1652
BspOI	GCTAGC	1 cut(s)	759
BspPI	GGATC	3 cut(s)	63, 1682, 1823
BspQI	GCTCTTC	1 cut(s)	651
BspT107I	GGYRCC	1 cut(s)	1051
BsrDI	GCAATG	2 cut(s)	322, 1681
BsrGI	TGTACA	1 cut(s)	232
BsrI	ACTGG	8 cut(s)	24, 812, 1055, 1652, 1756, 1908, 1947, 2010
BssECI	CCNNGG	3 cut(s)	352, 1570, 1704
BssNI	GRCGYC	1 cut(s)	681
BssT1I	CCWWGG	3 cut(s)	352, 1570, 1704
Bst2UI	CCWGG	4 cut(s)	218, 951, 1161, 1913
Bst4CI	ACNGT	1 cut(s)	1107
Bst6I	CTCTTC	1 cut(s)	651
BstACI	GRCGYC	1 cut(s)	681
BstAUI	TGTACA	1 cut(s)	232
BstC8I	GCNNGC	4 cut(s)	757, 797, 1601, 1860
BstDSI	CCRYGG	1 cut(s)	352
BstF5I	GGATG	8 cut(s)	10, 73, 256, 516, 937, 1098, 1951, 2014
BstMWI	GCNNNNNNNGC	8 cut(s)	167, 176, 268, 277, 1009, 1366, 1526, 1734
BstNI	CCWGG	4 cut(s)	218, 951, 1161, 1913
BstNSI	RCATGY	2 cut(s)	419, 799
BstSCI	CCNGG	4 cut(s)	216, 949, 1159, 1911
BstSLI	GKGCMC	1 cut(s)	282
BstV1I	GCAGC	8 cut(s)	117, 530, 648, 786, 930, 1087, 1176, 1369
BstV2I	GAAGAC	3 cut(s)	412, 676, 1242
BstX2I	RGATCY	1 cut(s)	1687
BstXI	CCANNNNNNTGG	2 cut(s)	1611, 1763
BstYI	RGATCY	1 cut(s)	1687
BsuI	GTATCC	1 cut(s)	43
BsuRI	GGCC	1 cut(s)	1575
BtgI	CCRYGG	1 cut(s)	352
BtsCI	GGATG	8 cut(s)	10, 73, 256, 516, 937, 1098, 1951, 2014
BtsIMutI	CAGTG	3 cut(s)	232, 900, 1901
Cac8I	GCNNGC	4 cut(s)	757, 797, 1601, 1860
CaiI	CAGNNNCTG	1 cut(s)	1532
Cfr13I	GGNCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
CseI	GACGC	2 cut(s)	626, 1237
CsiI	ACCWGGT	3 cut(s)	216, 949, 1911
Csp6I	GTAC	5 cut(s)	233, 862, 1473, 1583, 1784
CviQI	GTAC	5 cut(s)	233, 862, 1473, 1583, 1784
Eam1104I	CTCTTC	1 cut(s)	651
EarI	CTCTTC	1 cut(s)	651
Eco130I	CCWWGG	3 cut(s)	352, 1570, 1704
Eco47I	GGWCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
EcoRI	GAATTC	2 cut(s)	1264, 1804
EcoRII	CCWGG	4 cut(s)	216, 949, 1159, 1911
EcoT14I	CCWWGG	3 cut(s)	352, 1570, 1704
EcoT22I	ATGCAT	2 cut(s)	172, 1818
ErhI	CCWWGG	3 cut(s)	352, 1570, 1704
FaqI	GGGAC	2 cut(s)	711, 1240
FbaI	TGATCA	2 cut(s)	37, 466
Fnu4HI	GCNGC	9 cut(s)	131, 519, 662, 730, 800, 944, 1076, 1165, 1358
FokI	GGATG	8 cut(s)	17, 80, 263, 523, 924, 1085, 1958, 2021
Fsp4HI	GCNGC	9 cut(s)	131, 519, 662, 730, 800, 944, 1076, 1165, 1358
FspBI	CTAG	4 cut(s)	756, 918, 1232, 1671
GluI	GCNGC	9 cut(s)	131, 519, 662, 730, 800, 944, 1076, 1165, 1358
GsuI	CTGGAG	2 cut(s)	846, 983
HaeIII	GGCC	1 cut(s)	1575
HapII	CCGG	4 cut(s)	65, 424, 701, 1699
HgaI	GACGC	2 cut(s)	626, 1237
Hin1I	GRCGYC	1 cut(s)	681
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HindIII	AAGCTT	1 cut(s)	2028
HinfI	GANTC	5 cut(s)	345, 785, 1273, 1424, 1898
HpaI	GTTAAC	1 cut(s)	385
HpaII	CCGG	4 cut(s)	65, 424, 701, 1699
HphI	GGTGA	5 cut(s)	47, 332, 385, 512, 1358
Hpy166II	GTNNAC	3 cut(s)	385, 1110, 1475
Hpy188I	TCNGA	7 cut(s)	42, 532, 642, 655, 1103, 1320, 1482
Hpy8I	GTNNAC	3 cut(s)	385, 1110, 1475
Hpy99I	CGWCG	1 cut(s)	642
HpyAV	CCTTC	7 cut(s)	4, 334, 491, 500, 581, 733, 939
HpyCH4III	ACNGT	1 cut(s)	1107
HpyCH4IV	ACGT	1 cut(s)	681
HpyF10VI	GCNNNNNNNGC	8 cut(s)	167, 176, 268, 277, 1009, 1366, 1526, 1734
HpySE526I	ACGT	1 cut(s)	681
Hsp92I	GRCGYC	1 cut(s)	681
Kpn2I	TCCGGA	2 cut(s)	64, 423
Ksp22I	TGATCA	2 cut(s)	37, 466
KspAI	GTTAAC	1 cut(s)	385
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	2 cut(s)	267, 853
Lsp1109I	GCAGC	8 cut(s)	117, 530, 648, 786, 930, 1087, 1176, 1369
LweI	GCATC	4 cut(s)	228, 867, 1708, 1954
MabI	ACCWGGT	3 cut(s)	216, 949, 1911
MaeI	CTAG	4 cut(s)	756, 918, 1232, 1671
MaeII	ACGT	1 cut(s)	681
MaeIII	GTNAC	2 cut(s)	151, 1197
MfeI	CAATTG	1 cut(s)	1070
MflI	RGATCY	1 cut(s)	1687
MhlI	GDGCHC	1 cut(s)	282
MmeI	TCCRAC	2 cut(s)	620, 1126
Mph1103I	ATGCAT	2 cut(s)	172, 1818
MroI	TCCGGA	2 cut(s)	64, 423
MroXI	GAANNNNTTC	2 cut(s)	784, 1738
MseI	TTAA	5 cut(s)	384, 720, 909, 924, 1761
MslI	CAYNNNNRTG	1 cut(s)	392
MspA1I	CMGCKG	1 cut(s)	943
MspI	CCGG	4 cut(s)	65, 424, 701, 1699
MspR9I	CCNGG	4 cut(s)	218, 951, 1161, 1913
MunI	CAATTG	1 cut(s)	1070
MvaI	CCWGG	4 cut(s)	218, 951, 1161, 1913
MwoI	GCNNNNNNNGC	8 cut(s)	167, 176, 268, 277, 1009, 1366, 1526, 1734
NcoI	CCATGG	1 cut(s)	352
NheI	GCTAGC	1 cut(s)	755
NlaIV	GGNNCC	6 cut(s)	618, 699, 810, 1053, 1129, 1652
NsiI	ATGCAT	2 cut(s)	172, 1818
NspI	RCATGY	2 cut(s)	419, 799
PaeI	GCATGC	1 cut(s)	799
PciI	ACATGT	1 cut(s)	415
PciSI	GCTCTTC	1 cut(s)	651
PdmI	GAANNNNTTC	2 cut(s)	784, 1738
PfeI	GAWTC	5 cut(s)	345, 785, 1273, 1424, 1898
PflFI	GACNNNGTC	2 cut(s)	476, 951
PkrI	GCNGC	9 cut(s)	132, 520, 663, 731, 801, 945, 1077, 1166, 1359
PscI	ACATGT	1 cut(s)	415
PshBI	ATTAAT	1 cut(s)	924
Psp6I	CCWGG	4 cut(s)	216, 949, 1159, 1911
PspGI	CCWGG	4 cut(s)	216, 949, 1159, 1911
PspN4I	GGNNCC	6 cut(s)	618, 699, 810, 1053, 1129, 1652
PspPI	GGNCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
PstNI	CAGNNNCTG	1 cut(s)	1532
PsuI	RGATCY	1 cut(s)	1687
PsyI	GACNNNGTC	2 cut(s)	476, 951
RsaI	GTAC	5 cut(s)	234, 863, 1474, 1584, 1785
RsaNI	GTAC	5 cut(s)	233, 862, 1473, 1583, 1784
RseI	CAYNNNNRTG	1 cut(s)	392
SapI	GCTCTTC	1 cut(s)	651
SaqAI	TTAA	5 cut(s)	384, 720, 909, 924, 1761
SatI	GCNGC	9 cut(s)	131, 519, 662, 730, 800, 944, 1076, 1165, 1358
Sau96I	GGNCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
ScrFI	CCNGG	4 cut(s)	218, 951, 1161, 1913
SduI	GDGCHC	1 cut(s)	282
SexAI	ACCWGGT	3 cut(s)	216, 949, 1911
SfaNI	GCATC	4 cut(s)	228, 867, 1708, 1954
SinI	GGWCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
SmiMI	CAYNNNNRTG	1 cut(s)	392
SmlI	CTYRAG	1 cut(s)	1793
SmoI	CTYRAG	1 cut(s)	1793
SphI	GCATGC	1 cut(s)	799
SsiI	CCGC	4 cut(s)	86, 729, 872, 941
SspMI	CTAG	4 cut(s)	756, 918, 1232, 1671
StyD4I	CCNGG	4 cut(s)	216, 949, 1159, 1911
StyI	CCWWGG	3 cut(s)	352, 1570, 1704
TaaI	ACNGT	1 cut(s)	1107
TaiI	ACGT	1 cut(s)	684
TaqI	TCGA	3 cut(s)	884, 1808, 2020
TatI	WGTACW	2 cut(s)	232, 1472
TauI	GCSGC	1 cut(s)	732
TfiI	GAWTC	5 cut(s)	345, 785, 1273, 1424, 1898
Tru1I	TTAA	5 cut(s)	384, 720, 909, 924, 1761
Tru9I	TTAA	5 cut(s)	384, 720, 909, 924, 1761
TscAI	CASTG	3 cut(s)	232, 907, 1908
TseI	GCWGC	8 cut(s)	130, 518, 661, 799, 943, 1075, 1164, 1357
TspDTI	ATGAA	5 cut(s)	350, 597, 615, 1257, 1731
TspGWI	ACGGA	1 cut(s)	68
TspRI	CASTG	3 cut(s)	232, 907, 1908
Tth111I	GACNNNGTC	2 cut(s)	476, 951
VpaK11BI	GGWCC	8 cut(s)	13, 289, 448, 651, 698, 809, 1701, 1708
VspI	ATTAAT	1 cut(s)	924
XapI	RAATTY	7 cut(s)	113, 186, 964, 1084, 1264, 1321, 1804
XceI	RCATGY	2 cut(s)	419, 799
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1611, 1876
XmnI	GAANNNNTTC	2 cut(s)	784, 1738
XspI	CTAG	4 cut(s)	756, 918, 1232, 1671
ZraI	GACGTC	1 cut(s)	682
Zsp2I	ATGCAT	2 cut(s)	172, 1818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.