Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Forward (+)

56477735 .. 56486540

Gene Structure 8806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG389900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGAAGTAAAGAAGCTCTTCAATCATTCCAATAGCTCAATGGAGGTAAAGAATCTGACAAAGTTGGTTGCCTTAAATCCAGAATCTAGTGAAGATGGAGGAAAAGAAGCTTTCCAATACCAAGTATTCAGGCACCTCAAGAAAAGACCTGTTCTTATTCATAGAAGGAAAGATGTAAATGGAAGATTTCTACATAGATCGAGTTGGTTAGTCATGATGGATGCGAAGGACCAACTGGGAGGTTCTGTTGGTGATCAGAATGGGGATATGGATCGGTTTCCGGATGGTATGCGTGTCCTGGCGGTTGATGACGACCTAACTTATCTCAAATTCTTGGAGGCTACGCTGCGTAAATGCAATTATGAGGTAACTACCGCTAATCATGCATACGAGGCACTCCAAATTTTGAGGGAAAACAGAAACAAGTTTGACCTGGTAATCAGTGATGTACAGATGCCAGATATGGATGGCTTTCAGCTCCTAAAGCTCTTAGGGCACGAAATGGACCTACCTGTAATCATGGTGTCAGGCAATGGTGATACTGAGCTTATGAAGAAGGGAATCTCCCATGGCGCTTGTTGCTATTTGGTGAAACCTGTTAACATTGAAGTGTTCAAGACTATTTGGCAACATGTCTTCCTGAGAAAAAAGTTGAACTCTAAGGATCAATGCAAGTCTTGTGATCAAGACAAGGTCTGCAAAGGAACAGGAGAAGGTGAAGAAGGGATGTCAGCAGCAAGTAGTTCAGATAAGAATGGAAAACACAAAAGAAAAAGGAAGCACCAAAATGAAGATGATGAAGAAGGCGAAGATGATGAAGATGAGAATGAGGAACCATCAACCCAGAAGAAGCGTCGGATAGTTTGGTCCGAAGAGCTGCACAAAAAGTTTCTTGACGTTTTCTATTATCTGGGACCGGAAAAGGCTGTACCAAAGAAAATTCTTGAGCTGATGAATGTTGAAGATCTCTCAAGGGGTAATGTGGCCAGCCATCTGCAGAAGTTTAGGGAACAACTTAAAAAAGGCGGCAGTAAGAAGGAAAAGCAGAGAGCTAGCATTGTTGTTGATCTGGGGAGAACAGATTCTTCTTACATGCTGCACTCCGGTCCAATTGATGAATCTGGAGGGAGGCTCTCAAATCCTGCTCCCTTATCCTCATACATACCTCCGCAGATGCTTTCGAGATCAAACTCCCCCACTGATTTTAACATGCCAAGAATTAATCCTTCTTCTCATCTGCTGCGACCTGGTCAGTCCCAAAATTTCTCAGCTGGTTATGACTGTAATACTTCAATGTTACAAGGCAATCCACAGCAAAAACATGGGACGCTAGAGTTTGGAAATCAGTCTTCTCTTAGAGTGAATTCATTGAATCCCAAATCATTTGACAATGCCCTTTGTAGATCGTCCAATTTTCTGGATAACGATGGATATGGTGAAAGTTGGCAGGGTGGTATGCAGGGTTGTGGTCAATTATACCAATTTCCATCAACTGCTTTGCTCAGGAGTGAGGCTTCCAATTTTGGTCAATTTCCTGCTAATAACTTGGGTGTTTCTTCAAGTACACCTCAGATCGGGAACACTCCAAATGACTTCTCTTCTGTAAGTGCACTTTCAGCTTCTGTGGAGGAACCAAGAGAAAACATACATATAAAAAACCAAGGCCATGTTGTACCAACCATGTATTGCACGCCAAATCAATGGTGGGTAGATCATAAGCAAGATTACAACCACAACTGGAACCTTTCTTCCATCGTTTCTAGCAATGGTGTTGTAGATCCACTAAGCCGGACCTTGGACCAAAATGATGCAGTTTGCAGTAGAAGCATAAATTCATCTTTGTTTGACCAGTTTCATGGGGGAAATAGAACTATCGTACAGCGCCTTGAGGTTGAGAATTCGACCATGCATACAAAGATTGATCCTAATGAGGATTACATATTATTAGAGCAAGCAGAGTCCAATGATGGCTTGGTTCAAAATAGTCTTGAATCACTGGATAACCAGGTTGAATTGGAGAATGAGTTTGATTTACTGGACGGAGAGTTTGGATTTGATGCAATACAGGAACAAAAGAAGAATGACGAGTATGATTTACTGGATGGAGGGTTTCGATTTGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

708

Amino Acids

79.79

Weight (kDa)

5.48

Isoelectric Point (pI)

45.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	99 - 205	3.9e-23	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	132
AccIII	TCCGGA	1 cut(s)	280
AciI	CCGC	4 cut(s)	302, 375, 1026, 1169
AclWI	GGATC	4 cut(s)	279, 672, 1772, 1916
AcoI	YGGCCR	1 cut(s)	984
AcsI	RAATTY	7 cut(s)	329, 402, 939, 1261, 1363, 1831, 1897
AfaI	GTAC	5 cut(s)	450, 930, 1564, 1674, 1878
AfiI	CCNNNNNNNGG	2 cut(s)	1574, 1795
AflIII	ACRYGT	1 cut(s)	631
AjnI	CCWGG	4 cut(s)	297, 432, 1246, 2004
AloI	GAACNNNNNNTCC	2 cut(s)	1733, 1765
Alw21I	GWGCWC	1 cut(s)	1612
Alw44I	GTGCAC	1 cut(s)	1608
AlwI	GGATC	4 cut(s)	279, 672, 1772, 1916
AlwNI	CAGNNNCTG	1 cut(s)	1622
Aor13HI	TCCGGA	1 cut(s)	280
AoxI	GGCC	2 cut(s)	984, 1663
ApaLI	GTGCAC	1 cut(s)	1608
ApeKI	GCWGC	5 cut(s)	346, 734, 877, 1096, 1240
ApoI	RAATTY	7 cut(s)	329, 402, 939, 1261, 1363, 1831, 1897
ArsI	GACNNNNNNTTYG	2 cut(s)	2030, 2062
AseI	ATTAAT	1 cut(s)	1221
Asp700I	GAANNNNTTC	2 cut(s)	17, 1081
AspLEI	GCGC	2 cut(s)	575, 1884
AspS9I	GGNCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
AsuHPI	GGTGA	5 cut(s)	263, 548, 601, 728, 1448
AsuNHI	GCTAGC	1 cut(s)	1052
AvaII	GGWCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
BaeGI	GKGCMC	2 cut(s)	498, 1612
BalI	TGGCCA	1 cut(s)	986
BanI	GGYRCC	1 cut(s)	132
BbsI	GAAGAC	2 cut(s)	628, 1341
Bbv12I	GWGCWC	1 cut(s)	1612
BbvI	GCAGC	5 cut(s)	333, 746, 864, 1083, 1227
BciT130I	CCWGG	4 cut(s)	299, 434, 1248, 2006
BclI	TGATCA	2 cut(s)	253, 682
BfaI	CTAG	4 cut(s)	87, 1053, 1331, 1761
BfmI	CTRYAG	1 cut(s)	995
BfoI	RGCGCY	2 cut(s)	576, 1885
BglII	AGATCT	1 cut(s)	964
BisI	GCNGC	6 cut(s)	347, 735, 878, 1027, 1097, 1241
BlsI	GCNGC	6 cut(s)	348, 736, 879, 1028, 1098, 1242
Bme1390I	CCNGG	4 cut(s)	299, 434, 1248, 2006
Bme18I	GGWCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
BmgT120I	GGNCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
BmiI	GGNNCC	5 cut(s)	134, 834, 915, 1632, 1742
BmrFI	CCNGG	4 cut(s)	299, 434, 1248, 2006
BmrI	ACTGGG	1 cut(s)	245
BmsI	GCATC	5 cut(s)	211, 444, 1164, 1798, 2047
BmtI	GCTAGC	1 cut(s)	1056
BmuI	ACTGGG	1 cut(s)	245
BpiI	GAAGAC	2 cut(s)	628, 1341
BplI	GAGNNNNNCTC	2 cut(s)	1116, 1148
BpmI	CTGGAG	1 cut(s)	1143
Bpu10I	CCTNAGC	1 cut(s)	1502
BpuEI	CTTGAG	4 cut(s)	122, 955, 965, 1907
BsaBI	GATNNNNATC	1 cut(s)	270
BsaJI	CCNNGG	3 cut(s)	568, 1660, 1794
BsaWI	WCCGGW	3 cut(s)	280, 916, 1103
BsaXI	ACNNNNNCTCC	4 cut(s)	231, 261, 2009, 2039
Bsc4I	CCNNNNNNNGG	2 cut(s)	1574, 1795
Bse1I	ACTGG	6 cut(s)	240, 1742, 1849, 2001, 2040, 2103
Bse3DI	GCAATG	2 cut(s)	538, 1771
Bse8I	GATNNNNATC	1 cut(s)	270
BseAI	TCCGGA	1 cut(s)	280
BseBI	CCWGG	4 cut(s)	299, 434, 1248, 2006
BseDI	CCNNGG	3 cut(s)	568, 1660, 1794
BseGI	GGATG	5 cut(s)	226, 289, 472, 732, 2107
BseJI	GATNNNNATC	1 cut(s)	270
BseLI	CCNNNNNNNGG	2 cut(s)	1574, 1795
BseMI	GCAATG	2 cut(s)	538, 1771
BseMII	CTCAG	5 cut(s)	534, 632, 1281, 1516, 1583
BseNI	ACTGG	6 cut(s)	240, 1742, 1849, 2001, 2040, 2103
BseSI	GKGCMC	2 cut(s)	498, 1612
BseXI	GCAGC	5 cut(s)	333, 746, 864, 1083, 1227
BsgI	GTGCAG	2 cut(s)	863, 1082
BshFI	GGCC	2 cut(s)	986, 1665
BshNI	GGYRCC	1 cut(s)	132
BsiHKAI	GWGCWC	1 cut(s)	1612
BsiSI	CCGG	4 cut(s)	281, 917, 1104, 1789
BslFI	GGGAC	3 cut(s)	927, 1240, 1339
BslI	CCNNNNNNNGG	2 cut(s)	1574, 1795
BsmFI	GGGAC	3 cut(s)	927, 1240, 1339
BsnI	GGCC	2 cut(s)	986, 1665
Bsp1286I	GDGCHC	2 cut(s)	498, 1612
Bsp13I	TCCGGA	1 cut(s)	280
Bsp1407I	TGTACA	1 cut(s)	448
Bsp19I	CCATGG	1 cut(s)	568
BspACI	CCGC	4 cut(s)	302, 375, 1026, 1169
BspANI	GGCC	2 cut(s)	986, 1665
BspCNI	CTCAG	5 cut(s)	535, 633, 1280, 1515, 1582
BspEI	TCCGGA	1 cut(s)	280
BspHI	TCATGA	1 cut(s)	213
BspLI	GGNNCC	5 cut(s)	134, 834, 915, 1632, 1742
BspMAI	CTGCAG	1 cut(s)	999
BspOI	GCTAGC	1 cut(s)	1056
BspPI	GGATC	4 cut(s)	279, 672, 1772, 1916
BspQI	GCTCTTC	2 cut(s)	23, 867
BspT107I	GGYRCC	1 cut(s)	132
BsrDI	GCAATG	2 cut(s)	538, 1771
BsrGI	TGTACA	1 cut(s)	448
BsrI	ACTGG	6 cut(s)	240, 1742, 1849, 2001, 2040, 2103
BssECI	CCNNGG	3 cut(s)	568, 1660, 1794
BssT1I	CCWWGG	3 cut(s)	568, 1660, 1794
Bst2UI	CCWGG	4 cut(s)	299, 434, 1248, 2006
Bst4CI	ACNGT	1 cut(s)	1283
Bst6I	CTCTTC	3 cut(s)	23, 867, 1603
BstAUI	TGTACA	1 cut(s)	448
BstC8I	GCNNGC	4 cut(s)	988, 1054, 1691, 1953
BstDSI	CCRYGG	1 cut(s)	568
BstF5I	GGATG	5 cut(s)	226, 289, 472, 732, 2107
BstH2I	RGCGCY	2 cut(s)	576, 1885
BstHHI	GCGC	2 cut(s)	575, 1884
BstMWI	GCNNNNNNNGC	7 cut(s)	383, 392, 484, 493, 579, 1616, 1824
BstNI	CCWGG	4 cut(s)	299, 434, 1248, 2006
BstNSI	RCATGY	3 cut(s)	635, 1096, 1213
BstSCI	CCNGG	4 cut(s)	297, 432, 1246, 2004
BstSFI	CTRYAG	1 cut(s)	995
BstSLI	GKGCMC	2 cut(s)	498, 1612
BstV1I	GCAGC	5 cut(s)	333, 746, 864, 1083, 1227
BstV2I	GAAGAC	2 cut(s)	628, 1341
BstX2I	RGATCY	2 cut(s)	964, 1777
BstXI	CCANNNNNNTGG	3 cut(s)	1417, 1701, 1856
BstYI	RGATCY	2 cut(s)	964, 1777
BsuRI	GGCC	2 cut(s)	986, 1665
BtgI	CCRYGG	1 cut(s)	568
BtsCI	GGATG	5 cut(s)	226, 289, 472, 732, 2107
BtsIMutI	CAGTG	3 cut(s)	448, 1197, 1994
Cac8I	GCNNGC	4 cut(s)	988, 1054, 1691, 1953
CaiI	CAGNNNCTG	1 cut(s)	1622
CciI	TCATGA	1 cut(s)	213
CfoI	GCGC	2 cut(s)	575, 1884
Cfr13I	GGNCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
CseI	GACGC	2 cut(s)	842, 1336
CsiI	ACCWGGT	3 cut(s)	432, 1246, 2004
Csp6I	GTAC	5 cut(s)	449, 929, 1563, 1673, 1877
CviQI	GTAC	5 cut(s)	449, 929, 1563, 1673, 1877
EaeI	YGGCCR	1 cut(s)	984
Eam1104I	CTCTTC	3 cut(s)	23, 867, 1603
EarI	CTCTTC	3 cut(s)	23, 867, 1603
Eco130I	CCWWGG	3 cut(s)	568, 1660, 1794
Eco47I	GGWCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
EcoRI	GAATTC	2 cut(s)	1363, 1897
EcoRII	CCWGG	4 cut(s)	297, 432, 1246, 2004
EcoT14I	CCWWGG	3 cut(s)	568, 1660, 1794
EcoT22I	ATGCAT	2 cut(s)	388, 1911
ErhI	CCWWGG	3 cut(s)	568, 1660, 1794
FalI	AAGNNNNNCTT	1 cut(s)	34
FaqI	GGGAC	3 cut(s)	927, 1240, 1339
FbaI	TGATCA	2 cut(s)	253, 682
Fnu4HI	GCNGC	6 cut(s)	347, 735, 878, 1027, 1097, 1241
FokI	GGATG	5 cut(s)	233, 296, 479, 739, 2114
Fsp4HI	GCNGC	6 cut(s)	347, 735, 878, 1027, 1097, 1241
FspBI	CTAG	4 cut(s)	87, 1053, 1331, 1761
GlaI	GCGC	2 cut(s)	574, 1883
GluI	GCNGC	6 cut(s)	347, 735, 878, 1027, 1097, 1241
GsuI	CTGGAG	1 cut(s)	1143
HaeII	RGCGCY	2 cut(s)	576, 1885
HaeIII	GGCC	2 cut(s)	986, 1665
HapII	CCGG	4 cut(s)	281, 917, 1104, 1789
HgaI	GACGC	2 cut(s)	842, 1336
HhaI	GCGC	2 cut(s)	575, 1884
Hin6I	GCGC	2 cut(s)	573, 1882
HinP1I	GCGC	2 cut(s)	573, 1882
HincII	GTYRAC	1 cut(s)	601
HindII	GTYRAC	1 cut(s)	601
HindIII	AAGCTT	2 cut(s)	108, 2121
HinfI	GANTC	8 cut(s)	52, 83, 561, 1082, 1118, 1372, 1958, 1991
HpaI	GTTAAC	1 cut(s)	601
HpaII	CCGG	4 cut(s)	281, 917, 1104, 1789
HphI	GGTGA	5 cut(s)	263, 548, 601, 728, 1448
Hpy166II	GTNNAC	3 cut(s)	601, 1565, 1610
Hpy188I	TCNGA	6 cut(s)	57, 258, 748, 858, 871, 1572
Hpy8I	GTNNAC	3 cut(s)	601, 1565, 1610
Hpy99I	CGWCG	1 cut(s)	858
HpyAV	CCTTC	8 cut(s)	159, 220, 550, 707, 716, 797, 1030, 1236
HpyCH4III	ACNGT	1 cut(s)	1283
HpyCH4IV	ACGT	1 cut(s)	897
HpyF10VI	GCNNNNNNNGC	7 cut(s)	383, 392, 484, 493, 579, 1616, 1824
HpySE526I	ACGT	1 cut(s)	897
HspAI	GCGC	2 cut(s)	573, 1882
Kpn2I	TCCGGA	1 cut(s)	280
Ksp22I	TGATCA	2 cut(s)	253, 682
KspAI	GTTAAC	1 cut(s)	601
LguI	GCTCTTC	2 cut(s)	23, 867
LmnI	GCTCC	2 cut(s)	483, 1150
Lsp1109I	GCAGC	5 cut(s)	333, 746, 864, 1083, 1227
LweI	GCATC	5 cut(s)	211, 444, 1164, 1798, 2047
MabI	ACCWGGT	3 cut(s)	432, 1246, 2004
MaeI	CTAG	4 cut(s)	87, 1053, 1331, 1761
MaeII	ACGT	1 cut(s)	897
MaeIII	GTNAC	2 cut(s)	367, 1296
MfeI	CAATTG	1 cut(s)	1110
MflI	RGATCY	2 cut(s)	964, 1777
MhlI	GDGCHC	2 cut(s)	498, 1612
MlsI	TGGCCA	1 cut(s)	986
MluNI	TGGCCA	1 cut(s)	986
MlyI	GAGTC	1 cut(s)	1967
MmeI	TCCRAC	1 cut(s)	836
Mox20I	TGGCCA	1 cut(s)	986
Mph1103I	ATGCAT	2 cut(s)	388, 1911
MroI	TCCGGA	1 cut(s)	280
MroXI	GAANNNNTTC	2 cut(s)	17, 1081
MscI	TGGCCA	1 cut(s)	986
MseI	TTAA	5 cut(s)	74, 600, 1017, 1206, 1221
MslI	CAYNNNNRTG	2 cut(s)	608, 786
Msp20I	TGGCCA	1 cut(s)	986
MspA1I	CMGCKG	1 cut(s)	1271
MspI	CCGG	4 cut(s)	281, 917, 1104, 1789
MspR9I	CCNGG	4 cut(s)	299, 434, 1248, 2006
MunI	CAATTG	1 cut(s)	1110
MvaI	CCWGG	4 cut(s)	299, 434, 1248, 2006
MwoI	GCNNNNNNNGC	7 cut(s)	383, 392, 484, 493, 579, 1616, 1824
NcoI	CCATGG	1 cut(s)	568
NheI	GCTAGC	1 cut(s)	1052
NlaIV	GGNNCC	5 cut(s)	134, 834, 915, 1632, 1742
NsiI	ATGCAT	2 cut(s)	388, 1911
NspI	RCATGY	3 cut(s)	635, 1096, 1213
PagI	TCATGA	1 cut(s)	213
PciI	ACATGT	1 cut(s)	631
PciSI	GCTCTTC	2 cut(s)	23, 867
PdmI	GAANNNNTTC	2 cut(s)	17, 1081
PfeI	GAWTC	7 cut(s)	52, 83, 561, 1082, 1118, 1372, 1991
PflFI	GACNNNGTC	2 cut(s)	692, 1248
PkrI	GCNGC	6 cut(s)	348, 736, 879, 1028, 1098, 1242
PleI	GAGTC	1 cut(s)	1966
PpsI	GAGTC	1 cut(s)	1966
PscI	ACATGT	1 cut(s)	631
PshBI	ATTAAT	1 cut(s)	1221
Psp6I	CCWGG	4 cut(s)	297, 432, 1246, 2004
PspGI	CCWGG	4 cut(s)	297, 432, 1246, 2004
PspN4I	GGNNCC	5 cut(s)	134, 834, 915, 1632, 1742
PspPI	GGNCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
PstI	CTGCAG	1 cut(s)	999
PstNI	CAGNNNCTG	1 cut(s)	1622
PsuI	RGATCY	2 cut(s)	964, 1777
PsyI	GACNNNGTC	2 cut(s)	692, 1248
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	5 cut(s)	450, 930, 1564, 1674, 1878
RsaNI	GTAC	5 cut(s)	449, 929, 1563, 1673, 1877
RseI	CAYNNNNRTG	2 cut(s)	608, 786
SapI	GCTCTTC	2 cut(s)	23, 867
SaqAI	TTAA	5 cut(s)	74, 600, 1017, 1206, 1221
SatI	GCNGC	6 cut(s)	347, 735, 878, 1027, 1097, 1241
Sau96I	GGNCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
SchI	GAGTC	1 cut(s)	1967
ScrFI	CCNGG	4 cut(s)	299, 434, 1248, 2006
SduI	GDGCHC	2 cut(s)	498, 1612
SexAI	ACCWGGT	3 cut(s)	432, 1246, 2004
SfaNI	GCATC	5 cut(s)	211, 444, 1164, 1798, 2047
SfcI	CTRYAG	1 cut(s)	995
SinI	GGWCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
SmiMI	CAYNNNNRTG	2 cut(s)	608, 786
SmlI	CTYRAG	4 cut(s)	137, 944, 970, 1886
SmoI	CTYRAG	4 cut(s)	137, 944, 970, 1886
SsiI	CCGC	4 cut(s)	302, 375, 1026, 1169
SspMI	CTAG	4 cut(s)	87, 1053, 1331, 1761
StyD4I	CCNGG	4 cut(s)	297, 432, 1246, 2004
StyI	CCWWGG	3 cut(s)	568, 1660, 1794
TaaI	ACNGT	1 cut(s)	1283
TaiI	ACGT	1 cut(s)	900
TaqI	TCGA	4 cut(s)	200, 1181, 1901, 2113
TatI	WGTACW	2 cut(s)	448, 1562
TauI	GCSGC	1 cut(s)	1029
TfiI	GAWTC	7 cut(s)	52, 83, 561, 1082, 1118, 1372, 1991
Tru1I	TTAA	5 cut(s)	74, 600, 1017, 1206, 1221
Tru9I	TTAA	5 cut(s)	74, 600, 1017, 1206, 1221
TscAI	CASTG	3 cut(s)	448, 1204, 2001
TseI	GCWGC	5 cut(s)	346, 734, 877, 1096, 1240
TspGWI	ACGGA	1 cut(s)	2055
TspRI	CASTG	3 cut(s)	448, 1204, 2001
Tth111I	GACNNNGTC	2 cut(s)	692, 1248
VneI	GTGCAC	1 cut(s)	1608
VpaK11BI	GGWCC	7 cut(s)	229, 505, 867, 914, 1106, 1791, 1798
VspI	ATTAAT	1 cut(s)	1221
XapI	RAATTY	7 cut(s)	329, 402, 939, 1261, 1363, 1831, 1897
XceI	RCATGY	3 cut(s)	635, 1096, 1213
XcmI	CCANNNNNNNNNTGG	3 cut(s)	37, 1701, 1969
XmnI	GAANNNNTTC	2 cut(s)	17, 1081
XspI	CTAG	4 cut(s)	87, 1053, 1331, 1761
Zsp2I	ATGCAT	2 cut(s)	388, 1911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.