Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004285

Physical Location & Seq

Genomic Coordinates Reverse (-)

1016056 .. 1020047

Gene Structure 3992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG017700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGAAGGGAATCTCCCATGGTGCTTGTAATTATTTGTTGAAACCTGTTAGAATTGAAGAGCTCAAGAATATCTGGCAACATGTAGTCCGGAAAAAGTTCGACTCCAAGGACCAAAAAAAGTCTTCCAATCAGGACAAGAGCAATGGCATTGGAGAAGGTGTACAAGGGGCTTCACCAACAGGTAGTTCAGATCAGAATGGGAAACTGAGCAAGAAAAGAAAGGACCAAAATGGAGACGAGGAAGAAGAAAGTGAAGATGATGAACATGAGACTGAGGACTCATCGAGTCAGAAGAAGCCTCGGGTAGTTTGGTATGGGGAGTTACACAGAAAGTTTGTGGCAGCTGTAAATCAGTTGGGAGTTGAAAGGGCTGTTCCGAAGAAAATTCTTGACCTGATGGATGTTGAAGGATTATCAAGGGAAAATGTGGCGAGCCATCTACAGAAATATCGGCAATACCTTAAAAGAATAAGCAGTGGCATGGTTGGTTCTTTGGGAGGAAAAGAGTCCTCTTATGTGCGCATGGGTGTGTTAGATGGATCTAGAGATCTACAATCCTTGAGATCAGGGAGAATCTCTAGTACTACTTTATCAACATACACATCTGGTGGGATGCTTAGTAGATTAAACTCGCCGGCTGGTTTGAGCACAGGAGGAATTACTTCTTCCGGTCTGGGACAACCTGGTCACTCCCAAAACGTGAGCAACTATATTAATCCTTTTGCAAAGCTCCAGCCAACTGTGCCTCCAAACCAAAGTTCAAATTCATTCCAAGCGACTCCAGCATTATTACAGCTCAATCAGTTGCAGCAGAGCAAGTGCATCACCCACAATGGGAAGTCCTATCCCGACAATGATTCAACAAACTATACAATATCATCTACGTTTCGGAATTCAGGAGTGTCTTCTAGTCCACTCCCTTCTGATTCCAATTTTTCTAGCAATCATTTGATGTTACATGGCACACCACAACAAACACATGGTACGGGAGTGTTTGGAAATCCGACTTCTGTTAAAGTATCATTTGACATCGGCATCTCTGGCTCCCCTAATTTTCTGGATTACAATCGGTGTAGTGAAAACTTTCAGGGTGGTGCACGGTTATCCAGCTTTCCATCAAATGCTTTGCCAATGAGTGAGCCTTTTAATCATGGTCAAATGCATGCTAATAACTTGGGTGTTTTTTCTGGTAGGCCTCAAATTGGGAACACCCTGAATGATTTTTCTTCTGTAAGTGCACTTTCAGCTCCTGTTGATGAATTAAGAGGAAATGCACAGAACCAAGAAGGCTTGATTGGTGATGTTGTACCGACATTGAGTTACATGCCAAAGCAAAGGTGGGAAGAACACAAGGAAGGTTACAACCACGAGTTGAATCAAACTTTCAGTGCCATAAATTCCCCGGGTTCTGCAGTAGGTGTTAATGGCCGTGTAAGCCAGAGTTTGGATCAAAATGTTGCAGTATGCAGTTATGAAAGGAATTCATCTTTATTTGACCAGTTAAATGGGGCCACTGCAATGTTTGAGCAACCAAGTGAGGCTGGTAAGTCTTCCATGGAGACAAAGATGAAGCTGAATGAGGACTACTTCTTGGAGCAAATAAAGTCACCTAGTGGCTTCGTTCAGAATAGTTATGAATCATTGAATGATATAATGAGCACAATAATGAAACGGGAACAAAATGAGAATCTCTTACTGGATGCAGAATTTGGATTCGATGCGTACTCCCTTGGCTCATGTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

581

Amino Acids

63.38

Weight (kDa)

6.19

Isoelectric Point (pI)

50.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58080
fragaria_vesca	FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_1g01300 FvH4_6g29050
malus_domestica	MD15G1155800.v1.1
prunus_persica	Prupe.7G259300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0086131 RchiOBHm_Chr2g0133831
rosa_laevigata	RLG00000015746 RLG00000019368
rosa_multiflora	Rmu_co8376609.1_g000001 Rmu_sc0001782.1_g000042 Rmu_sc0004510.1_g000003
rosa_roxburghii	Rroxscaffold_2G00110780 Rroxscaffold_2G00154780
rosa_rugosa	Rorug01G0465900 Rorug01G0465900 Rorug02G0313900
rosa_samantha	Rh2AG015600 Rh2AG367400 Rh2BG015700 Rh2BG372800 Rh2CG016600 Rh2CG350700 Rh2DG017700 Rh2DG389900
rosa_wichuraiana	Rw2G001360 Rw2G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	684
Acc16I	TGCGCA	1 cut(s)	521
AccB7I	CCANNNNNTGG	1 cut(s)	1444
AccIII	TCCGGA	1 cut(s)	87
AclWI	GGATC	2 cut(s)	547, 1455
AcoI	YGGCCR	1 cut(s)	1426
AcsI	RAATTY	6 cut(s)	384, 763, 892, 1396, 1480, 1706
AdeI	CACNNNGTG	1 cut(s)	1613
AfaI	GTAC	5 cut(s)	162, 583, 985, 1308, 1724
AfiI	CCNNNNNNNGG	3 cut(s)	834, 1202, 1444
AflIII	ACRYGT	1 cut(s)	79
AgsI	TTSAA	8 cut(s)	40, 56, 365, 407, 762, 861, 1375, 1645
AjnI	CCWGG	1 cut(s)	682
AjuI	GAANNNNNNNTTGG	6 cut(s)	169, 201, 742, 774, 1278, 1310
AluBI	AGCT	7 cut(s)	61, 344, 730, 796, 1110, 1247, 1573
AluI	AGCT	7 cut(s)	61, 344, 730, 796, 1110, 1247, 1573
Alw21I	GWGCWC	5 cut(s)	63, 650, 1099, 1240, 1661
Alw26I	GTCTC	3 cut(s)	228, 263, 1553
Alw44I	GTGCAC	2 cut(s)	1095, 1236
AlwI	GGATC	2 cut(s)	547, 1455
AlwNI	CAGNNNCTG	1 cut(s)	1250
Ama87I	CYCGRG	2 cut(s)	300, 1402
Aor13HI	TCCGGA	1 cut(s)	87
AoxI	GGCC	3 cut(s)	1193, 1426, 1509
ApaLI	GTGCAC	2 cut(s)	1095, 1236
ApeKI	GCWGC	2 cut(s)	341, 808
ApoI	RAATTY	6 cut(s)	384, 763, 892, 1396, 1480, 1706
AseI	ATTAAT	1 cut(s)	714
Asp700I	GAANNNNTTC	3 cut(s)	95, 661, 1083
AspLEI	GCGC	1 cut(s)	522
AspS9I	GGNCC	3 cut(s)	109, 223, 1509
AsuC2I	CCSGG	2 cut(s)	1403, 1404
AsuHPI	GGTGA	4 cut(s)	165, 817, 1310, 1599
AvaI	CYCGRG	2 cut(s)	300, 1402
AvaII	GGWCC	2 cut(s)	109, 223
BaeGI	GKGCMC	2 cut(s)	1099, 1240
BaeI	ACNNNNGTAYC	2 cut(s)	975, 1008
BanII	GRGCYC	1 cut(s)	63
BauI	CACGAG	1 cut(s)	1367
BbsI	GAAGAC	3 cut(s)	114, 897, 1542
Bbv12I	GWGCWC	5 cut(s)	63, 650, 1099, 1240, 1661
BbvI	GCAGC	2 cut(s)	353, 820
BccI	CCATC	4 cut(s)	391, 444, 530, 1123
BceAI	ACGGC	1 cut(s)	1413
BciT130I	CCWGG	1 cut(s)	684
BcnI	CCSGG	2 cut(s)	1403, 1404
BcoDI	GTCTC	3 cut(s)	228, 263, 1553
BfaI	CTAG	5 cut(s)	543, 579, 909, 939, 1611
BfmI	CTRYAG	2 cut(s)	440, 1410
BglII	AGATCT	1 cut(s)	547
BisI	GCNGC	2 cut(s)	342, 809
BlsI	GCNGC	2 cut(s)	343, 810
BmcAI	AGTACT	1 cut(s)	583
Bme1390I	CCNGG	3 cut(s)	684, 1403, 1404
Bme18I	GGWCC	2 cut(s)	109, 223
BmeT110I	CYCGRG	2 cut(s)	300, 1402
BmgT120I	GGNCC	3 cut(s)	109, 223, 1509
BmiI	GGNNCC	2 cut(s)	1045, 1510
BmrFI	CCNGG	3 cut(s)	684, 1403, 1404
BmsI	GCATC	5 cut(s)	603, 831, 1044, 1690, 1708
BpiI	GAAGAC	3 cut(s)	114, 897, 1542
BpmI	CTGGAG	2 cut(s)	716, 765
BpuEI	CTTGAG	2 cut(s)	47, 580
BpuMI	CCSGG	2 cut(s)	1403, 1404
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaJI	CCNNGG	7 cut(s)	16, 105, 299, 1401, 1402, 1554, 1729
BsaWI	WCCGGW	2 cut(s)	87, 668
BsaXI	ACNNNNNCTCC	4 cut(s)	144, 174, 730, 760
Bsc4I	CCNNNNNNNGG	3 cut(s)	834, 1202, 1444
Bse118I	RCCGGY	1 cut(s)	634
Bse1I	ACTGG	2 cut(s)	1498, 1701
Bse3DI	GCAATG	2 cut(s)	148, 1524
Bse8I	GATNNNNATC	1 cut(s)	1065
BseAI	TCCGGA	1 cut(s)	87
BseBI	CCWGG	1 cut(s)	684
BseDI	CCNNGG	7 cut(s)	16, 105, 299, 1401, 1402, 1554, 1729
BseGI	GGATG	3 cut(s)	406, 618, 1705
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	3 cut(s)	834, 1202, 1444
BseMI	GCAATG	2 cut(s)	148, 1524
BseMII	CTCAG	2 cut(s)	197, 264
BseNI	ACTGG	2 cut(s)	1498, 1701
BseSI	GKGCMC	2 cut(s)	1099, 1240
BseXI	GCAGC	2 cut(s)	353, 820
BshFI	GGCC	3 cut(s)	1195, 1428, 1511
BsiHKAI	GWGCWC	5 cut(s)	63, 650, 1099, 1240, 1661
BsiHKCI	CYCGRG	2 cut(s)	300, 1402
BsiSI	CCGG	4 cut(s)	88, 635, 669, 1403
BslFI	GGGAC	1 cut(s)	690
BslI	CCNNNNNNNGG	3 cut(s)	834, 1202, 1444
BsmAI	GTCTC	3 cut(s)	228, 263, 1553
BsmBI	CGTCTC	1 cut(s)	228
BsmFI	GGGAC	1 cut(s)	690
BsnI	GGCC	3 cut(s)	1195, 1428, 1511
BsoBI	CYCGRG	2 cut(s)	300, 1402
Bsp1286I	GDGCHC	5 cut(s)	63, 650, 1099, 1240, 1661
Bsp13I	TCCGGA	1 cut(s)	87
Bsp1407I	TGTACA	1 cut(s)	160
Bsp143I	GATC	5 cut(s)	190, 539, 547, 563, 1447
Bsp19I	CCATGG	2 cut(s)	16, 1554
BspANI	GGCC	3 cut(s)	1195, 1428, 1511
BspCNI	CTCAG	2 cut(s)	198, 265
BspEI	TCCGGA	1 cut(s)	87
BspLI	GGNNCC	2 cut(s)	1045, 1510
BspMAI	CTGCAG	1 cut(s)	1414
BspPI	GGATC	2 cut(s)	547, 1455
BspQI	GCTCTTC	1 cut(s)	51
BsrDI	GCAATG	2 cut(s)	148, 1524
BsrFI	RCCGGY	1 cut(s)	634
BsrGI	TGTACA	1 cut(s)	160
BsrI	ACTGG	2 cut(s)	1498, 1701
BssAI	RCCGGY	1 cut(s)	634
BssECI	CCNNGG	7 cut(s)	16, 105, 299, 1401, 1402, 1554, 1729
BssMI	GATC	5 cut(s)	190, 539, 547, 563, 1447
BssSI	CACGAG	1 cut(s)	1367
BssT1I	CCWWGG	4 cut(s)	16, 105, 1554, 1729
Bst2BI	CACGAG	1 cut(s)	1367
Bst2UI	CCWGG	1 cut(s)	684
Bst4CI	ACNGT	2 cut(s)	742, 1101
Bst6I	CTCTTC	1 cut(s)	51
BstAUI	TGTACA	1 cut(s)	160
BstC8I	GCNNGC	3 cut(s)	433, 636, 1164
BstDEI	CTNAG	3 cut(s)	206, 273, 617
BstDSI	CCRYGG	2 cut(s)	16, 1554
BstF5I	GGATG	3 cut(s)	406, 618, 1705
BstHHI	GCGC	1 cut(s)	522
BstKTI	GATC	5 cut(s)	193, 542, 550, 566, 1450
BstMAI	GTCTC	3 cut(s)	228, 263, 1553
BstMBI	GATC	5 cut(s)	190, 539, 547, 563, 1447
BstMWI	GCNNNNNNNGC	5 cut(s)	742, 782, 1041, 1244, 1434
BstNI	CCWGG	1 cut(s)	684
BstNSI	RCATGY	3 cut(s)	83, 1166, 1327
BstSCI	CCNGG	3 cut(s)	682, 1401, 1402
BstSFI	CTRYAG	2 cut(s)	440, 1410
BstSLI	GKGCMC	2 cut(s)	1099, 1240
BstV1I	GCAGC	2 cut(s)	353, 820
BstV2I	GAAGAC	3 cut(s)	114, 897, 1542
BstX2I	RGATCY	2 cut(s)	539, 547
BstXI	CCANNNNNNTGG	1 cut(s)	1505
BstYI	RGATCY	2 cut(s)	539, 547
BsuRI	GGCC	3 cut(s)	1195, 1428, 1511
BtgI	CCRYGG	2 cut(s)	16, 1554
BtsCI	GGATG	3 cut(s)	406, 618, 1705
BtsI	GCAGTG	2 cut(s)	481, 1512
BtsIMutI	CAGTG	3 cut(s)	481, 1393, 1512
Cac8I	GCNNGC	3 cut(s)	433, 636, 1164
CaiI	CAGNNNCTG	1 cut(s)	1250
CfoI	GCGC	1 cut(s)	522
Cfr10I	RCCGGY	1 cut(s)	634
Cfr13I	GGNCC	3 cut(s)	109, 223, 1509
Cfr9I	CCCGGG	1 cut(s)	1402
CsiI	ACCWGGT	1 cut(s)	682
Csp6I	GTAC	5 cut(s)	161, 582, 984, 1307, 1723
CviQI	GTAC	5 cut(s)	161, 582, 984, 1307, 1723
DdeI	CTNAG	3 cut(s)	206, 273, 617
DpnI	GATC	5 cut(s)	192, 541, 549, 565, 1449
DpnII	GATC	5 cut(s)	190, 539, 547, 563, 1447
DraIII	CACNNNGTG	1 cut(s)	1613
DrdI	GACNNNNNNGTC	1 cut(s)	684
DseDI	GACNNNNNNGTC	1 cut(s)	684
EaeI	YGGCCR	1 cut(s)	1426
Eam1104I	CTCTTC	1 cut(s)	51
EarI	CTCTTC	1 cut(s)	51
Ecl136II	GAGCTC	1 cut(s)	61
Eco130I	CCWWGG	4 cut(s)	16, 105, 1554, 1729
Eco147I	AGGCCT	1 cut(s)	1195
Eco24I	GRGCYC	1 cut(s)	63
Eco47I	GGWCC	2 cut(s)	109, 223
Eco53kI	GAGCTC	1 cut(s)	61
Eco88I	CYCGRG	2 cut(s)	300, 1402
EcoICRI	GAGCTC	1 cut(s)	61
EcoRI	GAATTC	2 cut(s)	892, 1480
EcoRII	CCWGG	1 cut(s)	682
EcoT14I	CCWWGG	4 cut(s)	16, 105, 1554, 1729
EcoT22I	ATGCAT	1 cut(s)	1164
EcoT38I	GRGCYC	1 cut(s)	63
ErhI	CCWWGG	4 cut(s)	16, 105, 1554, 1729
Esp3I	CGTCTC	1 cut(s)	228
FaqI	GGGAC	1 cut(s)	690
Fnu4HI	GCNGC	2 cut(s)	342, 809
FokI	GGATG	3 cut(s)	413, 625, 1712
FriOI	GRGCYC	1 cut(s)	63
Fsp4HI	GCNGC	2 cut(s)	342, 809
FspAI	RTGCGCAY	1 cut(s)	521
FspBI	CTAG	5 cut(s)	543, 579, 909, 939, 1611
FspI	TGCGCA	1 cut(s)	521
GlaI	GCGC	1 cut(s)	521
GluI	GCNGC	2 cut(s)	342, 809
GsuI	CTGGAG	2 cut(s)	716, 765
HaeIII	GGCC	3 cut(s)	1195, 1428, 1511
HapII	CCGG	4 cut(s)	88, 635, 669, 1403
HhaI	GCGC	1 cut(s)	522
Hin6I	GCGC	1 cut(s)	520
HinP1I	GCGC	1 cut(s)	520
HpaII	CCGG	4 cut(s)	88, 635, 669, 1403
HphI	GGTGA	4 cut(s)	165, 817, 1310, 1599
Hpy166II	GTNNAC	4 cut(s)	161, 914, 1097, 1238
Hpy188I	TCNGA	8 cut(s)	190, 195, 291, 378, 891, 925, 1005, 1626
Hpy188III	TCNNGA	8 cut(s)	64, 88, 131, 389, 543, 848, 897, 1058
Hpy8I	GTNNAC	4 cut(s)	161, 914, 1097, 1238
HpyAV	CCTTC	5 cut(s)	149, 401, 930, 1280, 1349
HpyCH4III	ACNGT	2 cut(s)	742, 1101
HpyCH4IV	ACGT	2 cut(s)	699, 884
HpyF10VI	GCNNNNNNNGC	5 cut(s)	742, 782, 1041, 1244, 1434
HpyF3I	CTNAG	3 cut(s)	206, 273, 617
HpySE526I	ACGT	2 cut(s)	699, 884
HspAI	GCGC	1 cut(s)	520
Kpn2I	TCCGGA	1 cut(s)	87
KroI	GCCGGC	1 cut(s)	634
KroNI	GCCGGC	1 cut(s)	636
Kzo9I	GATC	5 cut(s)	190, 539, 547, 563, 1447
LguI	GCTCTTC	1 cut(s)	51
LmnI	GCTCC	4 cut(s)	735, 1049, 1252, 1594
Lsp1109I	GCAGC	2 cut(s)	353, 820
LweI	GCATC	5 cut(s)	603, 831, 1044, 1690, 1708
MabI	ACCWGGT	1 cut(s)	682
MaeI	CTAG	5 cut(s)	543, 579, 909, 939, 1611
MaeII	ACGT	2 cut(s)	699, 884
MaeIII	GTNAC	6 cut(s)	321, 686, 954, 1319, 1358, 1605
MalI	GATC	5 cut(s)	192, 541, 549, 565, 1449
MboI	GATC	5 cut(s)	190, 539, 547, 563, 1447
MflI	RGATCY	2 cut(s)	539, 547
MhlI	GDGCHC	5 cut(s)	63, 650, 1099, 1240, 1661
MlyI	GAGTC	5 cut(s)	95, 272, 295, 515, 772
MmeI	TCCRAC	1 cut(s)	1028
Mph1103I	ATGCAT	1 cut(s)	1164
MroI	TCCGGA	1 cut(s)	87
MroNI	GCCGGC	1 cut(s)	634
MroXI	GAANNNNTTC	3 cut(s)	95, 661, 1083
MseI	TTAA	8 cut(s)	462, 626, 714, 1014, 1146, 1262, 1422, 1502
MslI	CAYNNNNRTG	4 cut(s)	527, 1517, 1664, 1741
MspA1I	CMGCKG	1 cut(s)	344
MspI	CCGG	4 cut(s)	88, 635, 669, 1403
MspR9I	CCNGG	3 cut(s)	684, 1403, 1404
MvaI	CCWGG	1 cut(s)	684
MwoI	GCNNNNNNNGC	5 cut(s)	742, 782, 1041, 1244, 1434
NaeI	GCCGGC	1 cut(s)	636
NciI	CCSGG	2 cut(s)	1403, 1404
NcoI	CCATGG	2 cut(s)	16, 1554
NdeII	GATC	5 cut(s)	190, 539, 547, 563, 1447
NgoMIV	GCCGGC	1 cut(s)	634
NlaIV	GGNNCC	2 cut(s)	1045, 1510
NmuCI	GTSAC	2 cut(s)	686, 1605
NsbI	TGCGCA	1 cut(s)	521
NsiI	ATGCAT	1 cut(s)	1164
NspI	RCATGY	3 cut(s)	83, 1166, 1327
PaeI	GCATGC	1 cut(s)	1166
PceI	AGGCCT	1 cut(s)	1195
PciI	ACATGT	1 cut(s)	79
PciSI	GCTCTTC	1 cut(s)	51
PdiI	GCCGGC	1 cut(s)	636
PdmI	GAANNNNTTC	3 cut(s)	95, 661, 1083
PfeI	GAWTC	8 cut(s)	9, 573, 857, 926, 1375, 1637, 1687, 1713
PflMI	CCANNNNNTGG	1 cut(s)	1444
PkrI	GCNGC	2 cut(s)	343, 810
PleI	GAGTC	5 cut(s)	95, 272, 294, 514, 772
PpsI	GAGTC	5 cut(s)	95, 272, 294, 514, 772
PscI	ACATGT	1 cut(s)	79
PshBI	ATTAAT	1 cut(s)	714
Psp124BI	GAGCTC	1 cut(s)	63
Psp6I	CCWGG	1 cut(s)	682
PspGI	CCWGG	1 cut(s)	682
PspN4I	GGNNCC	2 cut(s)	1045, 1510
PspPI	GGNCC	3 cut(s)	109, 223, 1509
PstI	CTGCAG	1 cut(s)	1414
PstNI	CAGNNNCTG	1 cut(s)	1250
PsuI	RGATCY	2 cut(s)	539, 547
PvuII	CAGCTG	1 cut(s)	344
RsaI	GTAC	5 cut(s)	162, 583, 985, 1308, 1724
RsaNI	GTAC	5 cut(s)	161, 582, 984, 1307, 1723
RseI	CAYNNNNRTG	4 cut(s)	527, 1517, 1664, 1741
SacI	GAGCTC	1 cut(s)	63
SapI	GCTCTTC	1 cut(s)	51
SaqAI	TTAA	8 cut(s)	462, 626, 714, 1014, 1146, 1262, 1422, 1502
SatI	GCNGC	2 cut(s)	342, 809
Sau3AI	GATC	5 cut(s)	190, 539, 547, 563, 1447
Sau96I	GGNCC	3 cut(s)	109, 223, 1509
ScaI	AGTACT	1 cut(s)	583
SchI	GAGTC	5 cut(s)	95, 272, 295, 515, 772
ScrFI	CCNGG	3 cut(s)	684, 1403, 1404
SduI	GDGCHC	5 cut(s)	63, 650, 1099, 1240, 1661
SexAI	ACCWGGT	1 cut(s)	682
SfaNI	GCATC	5 cut(s)	603, 831, 1044, 1690, 1708
SfcI	CTRYAG	2 cut(s)	440, 1410
SinI	GGWCC	2 cut(s)	109, 223
SmaI	CCCGGG	1 cut(s)	1404
SmiMI	CAYNNNNRTG	4 cut(s)	527, 1517, 1664, 1741
SmlI	CTYRAG	2 cut(s)	62, 559
SmoI	CTYRAG	2 cut(s)	62, 559
SphI	GCATGC	1 cut(s)	1166
SseBI	AGGCCT	1 cut(s)	1195
SspMI	CTAG	5 cut(s)	543, 579, 909, 939, 1611
SstI	GAGCTC	1 cut(s)	63
StuI	AGGCCT	1 cut(s)	1195
StyD4I	CCNGG	3 cut(s)	682, 1401, 1402
StyI	CCWWGG	4 cut(s)	16, 105, 1554, 1729
TaaI	ACNGT	2 cut(s)	742, 1101
TaiI	ACGT	2 cut(s)	702, 887
TaqI	TCGA	3 cut(s)	99, 284, 1716
TatI	WGTACW	2 cut(s)	160, 581
TfiI	GAWTC	8 cut(s)	9, 573, 857, 926, 1375, 1637, 1687, 1713
Tru1I	TTAA	8 cut(s)	462, 626, 714, 1014, 1146, 1262, 1422, 1502
Tru9I	TTAA	8 cut(s)	462, 626, 714, 1014, 1146, 1262, 1422, 1502
TscAI	CASTG	3 cut(s)	481, 1393, 1519
TseFI	GTSAC	2 cut(s)	686, 1605
TseI	GCWGC	2 cut(s)	341, 808
Tsp45I	GTSAC	2 cut(s)	686, 1605
TspDTI	ATGAA	9 cut(s)	17, 276, 756, 1272, 1473, 1488, 1583, 1650, 1682
TspMI	CCCGGG	1 cut(s)	1402
TspRI	CASTG	3 cut(s)	481, 1393, 1519
Van91I	CCANNNNNTGG	1 cut(s)	1444
VneI	GTGCAC	2 cut(s)	1095, 1236
VpaK11BI	GGWCC	2 cut(s)	109, 223
VspI	ATTAAT	1 cut(s)	714
XapI	RAATTY	6 cut(s)	384, 763, 892, 1396, 1480, 1706
XbaI	TCTAGA	1 cut(s)	542
XceI	RCATGY	3 cut(s)	83, 1166, 1327
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1335
XmaI	CCCGGG	1 cut(s)	1402
XmnI	GAANNNNTTC	3 cut(s)	95, 661, 1083
XspI	CTAG	5 cut(s)	543, 579, 909, 939, 1611
ZrmI	AGTACT	1 cut(s)	583
Zsp2I	ATGCAT	1 cut(s)	1164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.