Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003856

Physical Location & Seq

Genomic Coordinates Forward (+)

9933340 .. 9937193

Gene Structure 3854 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G067500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGTGGGATTCAGAGACTGAGTCAGTTGGAGGGAGAGATTACGGCAATGGAGTTCTTAGTTCAAGCAAGCACAGTGTTAAGACTGATGGATTTGAGCTAAAAGGCAGCTCTTGGTATGTTGCAACTGATATCCCAAGTGACCTGCTAGTTCAAGTTGGAGATGTGAATTTTCACTTGCACAAGTATCCCCTGCTGTCAAGGAGTGGAAAGATCAACAGAGTTATGTATGAATTACGCGACCCGGACTTGAGTAAGATAGCTTTGGATGACCTTCCTGGTGGACCGGAGGCGTTCGAGCTAGCTGCGAAATTCTGCTATGGAATTGCTGTTGATCTAACAGCAGCTAACATTTCAGGCCTGAGATGTGCTGCTGAGTACCTTGAAATGACAGAGGACTTGGAAGAAGGCAATCTTATCTTCAAAACGGAGGCGTTTCTCAGCTATGTGGTTTTATCCTCATGGAGAGACTCCATAGTTGTGTTGAAAAGCTGTGAGAAGCTCTCACCATGGGCGGAAAATCTTCAAATTGTCCGAAGATGCAGCGAGTCTATTGCTTGGAAAGCTTGTGCCAATCCAAAAGGAATAAGATGGGCATACACTGGAAAGCCACTAAAAGTTTCAAGTCCAAGCTGGAATGACATGAAGGACTCAAGTCCAAGTAAAAACCAGCAGGTCCCTCCTGATTGGTGGTTTGAAGATGTTTCGATTCTTAGGATTGATCACTTTGTCAGGGTTATTACTGCAATTAAGGTAAAGGGGATGAGATTTGAACTGATTGGAGCTGCAATAATGCATTATGCATCCAAATGGCTTCCGGGTTTAATAAATGATGGCGCGGCTGCAGCAGATGAAGGAAGCAACAGCAGCAATAATAATACCAGTAATAGTGGCAGCAGTTGGAAGGGTGGACTCCATTTGATTGTGGCAGGAAATAAAGATGAGCCTCCAAGTGTTCAGGCCAAAGATCAACGGATGATCATTGAGAGCCTCATCAGTATAATTCCACCACAGAAGGATAGTGTCTCATGCAGCTTCCTTCTTCGGCTTTTGAGAATGGCAAACATGTTGAAAGTAGCACTTGCTTTGGTTACTGAGCTGGAAAAACGCGTGGGAATGCAGTTCGAACAGGCTACATTGGCGGATCTTCTTATTCCTTCTTACAATAAAAGTGAAACTATGTATGATGTGGATCTTGTTCAAAGGCTTCTGGAGCATTTTCTGGTTCAAGAACAAACAGATATTTCAAGTCCAAGCCAACAATCTTTCCCTGGAAAACACTATGATGACATTCAAAGGGGTACAGGCCCAAATGCTAAGATGAGGGTAGCTAGGCTTGTCGATAGTTATCTTACCGAGGTATCCAGAGATAGAAGCCTCTCCCTAACAAAGTTTCAGGTGCTGGCAGAAGCTTTGCCTGATTCTGCAAGGATCTGTGATGATGGACTTTATAGAGCAATTGATTCCTATCTTAAGGCCCATCCTACACTTTCTGAGCATGAAAGGAAGAGGCTTTGCCGAGTGATGGATTGCCAAAAGTTATCAATTGATGCCTGCATGCATGCTGCCCAAAATGAAAGACTCCCATTAAGGGTGGTGGTGCAAGTTCTTTTCTCTGAACAAGTTAAAATAAGCAATGCATTAGCCACCAGCTCCCTCAAAGAAGCTGGAGAATCTCAGTATCAGCCAATGGTTTCGAATCGAAAAACACTACTCGAAGGGACCCCGCAATCATTCCAAGAAGGATGGGCAGCAGCTAAAAAAGACATCAACACGGTAAAGTTCGAACTGGAGAGTGTCAAAGCCAAGTACCTTGAGCTCCAGAATGACATGGACAACTTGCAGAGACAATTTGATAAGATGTCAAAGCAGAAACAGACATCCGCATGGAGCAGTGGATGGAAGAAACTAAGCAAACTCACAAAGACCACGAACTTAGAAAATCAGCACAACATTGGGACTGAGCACCAAGCAGCTGTAGATCAGCAGAATAGAAAGACACCTAGGAGGTGGAGAAATTCGATTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009987 GO:0016020 GO:0016567 GO:0019538 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0070647 GO:0071704 GO:0071944 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

676

Amino Acids

75.69

Weight (kDa)

7.19

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003856)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64330 AT5G64330 AT5G64330
fragaria_vesca	FvH4_5g25720 FvH4_5g25720 FvH4_5g25720
malus_domestica	MD05G1047100.v1.1 MD10G1053800.v1.1
prunus_persica	Prupe.8G067500_v2.0.a1 Prupe.8G067500_v2.0.a1
pyrus_communis	pycom10g04060
rosa_chinensis	RchiOBHm_Chr6g0271301 RchiOBHm_Chr7g0216061
rosa_laevigata	RLG00000002597 RLG00000013726
rosa_multiflora	Rmu_sc0002356.1_g000004 Rmu_sc0004866.1_g000011
rosa_roxburghii	Rroxscaffold_3G00243680 Rroxscaffold_7G00197120
rosa_rugosa	Rorug06G0059500 Rorug06G0059600 Rorug06G0059700 Rorug07G0158400 Rorug07G0158500 Rorug07G0158600
rosa_samantha	Rh6AG179400 Rh6BG182500 Rh6CG179400 Rh6DG171100 Rh7AG295600 Rh7CG316000
rosa_wichuraiana	Rw6G015410 Rw6G015430 Rw7G025140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	150, 661
AccII	CGCG	3 cut(s)	237, 836, 1107
AciI	CCGC	5 cut(s)	512, 836, 1139, 1724, 1881
AclWI	GGATC	3 cut(s)	1149, 1197, 1436
AcsI	RAATTY	3 cut(s)	166, 308, 2014
AfaI	GTAC	3 cut(s)	377, 1300, 1808
AfiI	CCNNNNNNNGG	2 cut(s)	1522, 1588
AflII	CTTAAG	1 cut(s)	1469
AflIII	ACRYGT	2 cut(s)	1062, 1105
AjnI	CCWGG	2 cut(s)	274, 1267
Alw21I	GWGCWC	2 cut(s)	1818, 1965
Alw26I	GTCTC	4 cut(s)	8, 459, 1027, 1837
AlwI	GGATC	3 cut(s)	1149, 1197, 1436
AlwNI	CAGNNNCTG	2 cut(s)	17, 1399
AoxI	GGCC	4 cut(s)	355, 957, 1303, 1473
ApoI	RAATTY	3 cut(s)	166, 308, 2014
Asp700I	GAANNNNTTC	1 cut(s)	519
AspA2I	CCTAGG	1 cut(s)	2000
AspLEI	GCGC	1 cut(s)	836
AspS9I	GGNCC	5 cut(s)	281, 673, 1304, 1474, 1719
AsuC2I	CCSGG	2 cut(s)	242, 816
AsuHPI	GGTGA	1 cut(s)	495
AsuII	TTCGAA	3 cut(s)	1122, 1694, 1782
AsuNHI	GCTAGC	1 cut(s)	298
AvaII	GGWCC	3 cut(s)	281, 673, 1719
AvrII	CCTAGG	1 cut(s)	2000
BaeI	ACNNNNGTAYC	2 cut(s)	1341, 1374
BanII	GRGCYC	1 cut(s)	1818
Bbv12I	GWGCWC	2 cut(s)	1818, 1965
BccI	CCATC	8 cut(s)	80, 582, 824, 1433, 1485, 1516, 1737, 1890
BceAI	ACGGC	1 cut(s)	58
BcgI	CGANNNNNNTGC	4 cut(s)	284, 318, 533, 567
BciT130I	CCWGG	2 cut(s)	276, 1269
BciVI	GTATCC	2 cut(s)	195, 1369
BclI	TGATCA	2 cut(s)	718, 975
BcnI	CCSGG	2 cut(s)	242, 816
BcoDI	GTCTC	4 cut(s)	8, 459, 1027, 1837
BfaI	CTAG	4 cut(s)	146, 299, 1329, 2001
BfmI	CTRYAG	2 cut(s)	840, 1974
BfrI	CTTAAG	1 cut(s)	1469
BfuAI	ACCTGC	2 cut(s)	150, 661
BfuI	GTATCC	2 cut(s)	195, 1369
BlnI	CCTAGG	1 cut(s)	2000
Bme1390I	CCNGG	4 cut(s)	242, 276, 816, 1269
Bme18I	GGWCC	3 cut(s)	281, 673, 1719
BmgT120I	GGNCC	5 cut(s)	281, 673, 1304, 1474, 1719
BmiI	GGNNCC	3 cut(s)	675, 1720, 1721
BmrFI	CCNGG	4 cut(s)	242, 276, 816, 1269
BmsI	GCATC	3 cut(s)	527, 809, 1537
BmtI	GCTAGC	1 cut(s)	302
BoxI	GACNNNNGTC	1 cut(s)	651
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
BpmI	CTGGAG	4 cut(s)	1229, 1686, 1802, 1808
Bpu14I	TTCGAA	3 cut(s)	1122, 1694, 1782
BpuEI	CTTGAG	3 cut(s)	268, 634, 1832
BpuMI	CCSGG	2 cut(s)	242, 816
BsaBI	GATNNNNATC	3 cut(s)	1188, 1344, 1464
BsaJI	CCNNGG	4 cut(s)	506, 1267, 1353, 2000
BsaWI	WCCGGW	1 cut(s)	283
Bsc4I	CCNNNNNNNGG	2 cut(s)	1522, 1588
Bse1I	ACTGG	3 cut(s)	604, 879, 1791
Bse3DI	GCAATG	2 cut(s)	52, 1639
Bse8I	GATNNNNATC	3 cut(s)	1188, 1344, 1464
BseBI	CCWGG	2 cut(s)	276, 1269
BseDI	CCNNGG	4 cut(s)	506, 1267, 1353, 2000
BseGI	GGATG	8 cut(s)	271, 765, 800, 978, 1477, 1748, 1877, 1901
BseJI	GATNNNNATC	3 cut(s)	1188, 1344, 1464
BseLI	CCNNNNNNNGG	2 cut(s)	1522, 1588
BseMI	GCAATG	2 cut(s)	52, 1639
BseMII	CTCAG	8 cut(s)	9, 350, 363, 451, 1083, 1482, 1688, 1950
BseNI	ACTGG	3 cut(s)	604, 879, 1791
Bsh1236I	CGCG	3 cut(s)	237, 836, 1107
BshFI	GGCC	4 cut(s)	357, 959, 1305, 1475
BsiHKAI	GWGCWC	2 cut(s)	1818, 1965
BsiSI	CCGG	3 cut(s)	242, 284, 815
BslFI	GGGAC	3 cut(s)	659, 1732, 1969
BslI	CCNNNNNNNGG	2 cut(s)	1522, 1588
BsmAI	GTCTC	4 cut(s)	8, 459, 1027, 1837
BsmFI	GGGAC	3 cut(s)	659, 1732, 1969
BsmI	GAATGC	1 cut(s)	1119
BsnI	GGCC	4 cut(s)	357, 959, 1305, 1475
Bsp119I	TTCGAA	3 cut(s)	1122, 1694, 1782
Bsp1286I	GDGCHC	2 cut(s)	1818, 1965
Bsp143I	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
Bsp19I	CCATGG	1 cut(s)	506
BspACI	CCGC	5 cut(s)	512, 836, 1139, 1724, 1881
BspANI	GGCC	4 cut(s)	357, 959, 1305, 1475
BspCNI	CTCAG	8 cut(s)	10, 351, 364, 450, 1084, 1483, 1687, 1951
BspFNI	CGCG	3 cut(s)	237, 836, 1107
BspLI	GGNNCC	3 cut(s)	675, 1720, 1721
BspMAI	CTGCAG	1 cut(s)	844
BspMI	ACCTGC	2 cut(s)	150, 661
BspOI	GCTAGC	1 cut(s)	302
BspPI	GGATC	3 cut(s)	1149, 1197, 1436
BspT104I	TTCGAA	3 cut(s)	1122, 1694, 1782
BspTI	CTTAAG	1 cut(s)	1469
BsrDI	GCAATG	2 cut(s)	52, 1639
BsrI	ACTGG	3 cut(s)	604, 879, 1791
BssECI	CCNNGG	4 cut(s)	506, 1267, 1353, 2000
BssMI	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
BssT1I	CCWWGG	2 cut(s)	506, 2000
Bst2UI	CCWGG	2 cut(s)	276, 1269
Bst4CI	ACNGT	2 cut(s)	74, 1774
Bst6I	CTCTTC	1 cut(s)	1499
BstAFI	CTTAAG	1 cut(s)	1469
BstBI	TTCGAA	3 cut(s)	1122, 1694, 1782
BstC8I	GCNNGC	6 cut(s)	68, 300, 1401, 1552, 1556, 1560
BstDSI	CCRYGG	1 cut(s)	506
BstF5I	GGATG	8 cut(s)	271, 765, 800, 978, 1477, 1748, 1877, 1901
BstFNI	CGCG	3 cut(s)	237, 836, 1107
BstHHI	GCGC	1 cut(s)	836
BstKTI	GATC	9 cut(s)	213, 334, 721, 967, 978, 1144, 1192, 1431, 1981
BstMAI	GTCTC	4 cut(s)	8, 459, 1027, 1837
BstMBI	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
BstMWI	GCNNNNNNNGC	5 cut(s)	560, 842, 864, 1136, 1210
BstNI	CCWGG	2 cut(s)	276, 1269
BstNSI	RCATGY	3 cut(s)	1066, 1558, 1562
BstPAI	GACNNNNGTC	1 cut(s)	651
BstSCI	CCNGG	4 cut(s)	240, 274, 814, 1267
BstSFI	CTRYAG	2 cut(s)	840, 1974
BstUI	CGCG	3 cut(s)	237, 836, 1107
BstX2I	RGATCY	3 cut(s)	1141, 1189, 1428
BstYI	RGATCY	3 cut(s)	1141, 1189, 1428
BsuI	GTATCC	2 cut(s)	195, 1369
BsuRI	GGCC	4 cut(s)	357, 959, 1305, 1475
BtgI	CCRYGG	1 cut(s)	506
BtsCI	GGATG	8 cut(s)	271, 765, 800, 978, 1477, 1748, 1877, 1901
BtsI	GCAGTG	1 cut(s)	1897
BtsIMutI	CAGTG	3 cut(s)	79, 597, 1897
BveI	ACCTGC	2 cut(s)	150, 661
Cac8I	GCNNGC	6 cut(s)	68, 300, 1401, 1552, 1556, 1560
CaiI	CAGNNNCTG	2 cut(s)	17, 1399
CfoI	GCGC	1 cut(s)	836
Cfr13I	GGNCC	5 cut(s)	281, 673, 1304, 1474, 1719
Csp6I	GTAC	3 cut(s)	376, 1299, 1807
CviQI	GTAC	3 cut(s)	376, 1299, 1807
DpnI	GATC	9 cut(s)	212, 333, 720, 966, 977, 1143, 1191, 1430, 1980
DpnII	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
Eam1104I	CTCTTC	1 cut(s)	1499
EarI	CTCTTC	1 cut(s)	1499
EciI	GGCGGA	2 cut(s)	527, 1154
Ecl136II	GAGCTC	1 cut(s)	1816
Eco130I	CCWWGG	2 cut(s)	506, 2000
Eco147I	AGGCCT	1 cut(s)	357
Eco24I	GRGCYC	1 cut(s)	1818
Eco32I	GATATC	1 cut(s)	130
Eco47I	GGWCC	3 cut(s)	281, 673, 1719
Eco53kI	GAGCTC	1 cut(s)	1816
EcoICRI	GAGCTC	1 cut(s)	1816
EcoO109I	RGGNCCY	2 cut(s)	673, 1719
EcoRII	CCWGG	2 cut(s)	274, 1267
EcoRV	GATATC	1 cut(s)	130
EcoT14I	CCWWGG	2 cut(s)	506, 2000
EcoT22I	ATGCAT	4 cut(s)	795, 802, 1560, 1639
EcoT38I	GRGCYC	1 cut(s)	1818
ErhI	CCWWGG	2 cut(s)	506, 2000
FalI	AAGNNNNNCTT	4 cut(s)	396, 428, 1062, 1094
FaqI	GGGAC	3 cut(s)	659, 1732, 1969
FauI	CCCGC	1 cut(s)	1731
FbaI	TGATCA	2 cut(s)	718, 975
FokI	GGATG	8 cut(s)	278, 772, 787, 985, 1464, 1755, 1864, 1908
FriOI	GRGCYC	1 cut(s)	1818
FspBI	CTAG	4 cut(s)	146, 299, 1329, 2001
GlaI	GCGC	1 cut(s)	835
GsuI	CTGGAG	4 cut(s)	1229, 1686, 1802, 1808
HaeIII	GGCC	4 cut(s)	357, 959, 1305, 1475
HapII	CCGG	3 cut(s)	242, 284, 815
HhaI	GCGC	1 cut(s)	836
Hin6I	GCGC	1 cut(s)	834
HinP1I	GCGC	1 cut(s)	834
HindIII	AAGCTT	2 cut(s)	561, 1407
HpaII	CCGG	3 cut(s)	242, 284, 815
HphI	GGTGA	1 cut(s)	495
Hpy166II	GTNNAC	2 cut(s)	281, 908
Hpy188I	TCNGA	4 cut(s)	13, 533, 1492, 1615
Hpy188III	TCNNGA	6 cut(s)	680, 1208, 1226, 1362, 1819, 2025
Hpy8I	GTNNAC	2 cut(s)	281, 908
HpyCH4III	ACNGT	2 cut(s)	74, 1774
HpyF10VI	GCNNNNNNNGC	5 cut(s)	560, 842, 864, 1136, 1210
HspAI	GCGC	1 cut(s)	834
KflI	GGGWCCC	1 cut(s)	1719
Ksp22I	TGATCA	2 cut(s)	718, 975
Kzo9I	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
LmnI	GCTCC	5 cut(s)	779, 1210, 1655, 1821, 1887
LweI	GCATC	3 cut(s)	527, 809, 1537
MaeI	CTAG	4 cut(s)	146, 299, 1329, 2001
MaeIII	GTNAC	2 cut(s)	137, 1087
MalI	GATC	9 cut(s)	212, 333, 720, 966, 977, 1143, 1191, 1430, 1980
MboI	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
MboII	GAAGA	9 cut(s)	409, 413, 512, 546, 707, 1031, 1136, 1516, 1912
MfeI	CAATTG	2 cut(s)	1455, 1542
MflI	RGATCY	3 cut(s)	1141, 1189, 1428
MhlI	GDGCHC	2 cut(s)	1818, 1965
MluI	ACGCGT	1 cut(s)	1105
MlyI	GAGTC	6 cut(s)	29, 461, 554, 641, 903, 1572
MmeI	TCCRAC	3 cut(s)	7, 136, 878
Mph1103I	ATGCAT	4 cut(s)	795, 802, 1560, 1639
MroXI	GAANNNNTTC	1 cut(s)	519
MseI	TTAA	6 cut(s)	78, 747, 821, 1470, 1586, 1623
MslI	CAYNNNNRTG	4 cut(s)	476, 805, 1281, 1882
MspA1I	CMGCKG	1 cut(s)	1973
MspCI	CTTAAG	1 cut(s)	1469
MspI	CCGG	3 cut(s)	242, 284, 815
MspR9I	CCNGG	4 cut(s)	242, 276, 816, 1269
MunI	CAATTG	2 cut(s)	1455, 1542
Mva1269I	GAATGC	1 cut(s)	1119
MvaI	CCWGG	2 cut(s)	276, 1269
MvnI	CGCG	3 cut(s)	237, 836, 1107
MwoI	GCNNNNNNNGC	5 cut(s)	560, 842, 864, 1136, 1210
NciI	CCSGG	2 cut(s)	242, 816
NcoI	CCATGG	1 cut(s)	506
NdeII	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
NheI	GCTAGC	1 cut(s)	298
NlaIV	GGNNCC	3 cut(s)	675, 1720, 1721
NmeAIII	GCCGAG	1 cut(s)	1541
NmuCI	GTSAC	1 cut(s)	137
NsiI	ATGCAT	4 cut(s)	795, 802, 1560, 1639
NspI	RCATGY	3 cut(s)	1066, 1558, 1562
NspV	TTCGAA	3 cut(s)	1122, 1694, 1782
PaeI	GCATGC	2 cut(s)	1558, 1562
PceI	AGGCCT	1 cut(s)	357
PciI	ACATGT	1 cut(s)	1062
PctI	GAATGC	1 cut(s)	1119
PdmI	GAANNNNTTC	1 cut(s)	519
PfeI	GAWTC	6 cut(s)	8, 706, 1418, 1460, 1670, 1696
PflFI	GACNNNGTC	1 cut(s)	19
PleI	GAGTC	6 cut(s)	28, 461, 553, 641, 903, 1572
PpsI	GAGTC	6 cut(s)	28, 461, 553, 641, 903, 1572
PpuMI	RGGWCCY	2 cut(s)	673, 1719
PscI	ACATGT	1 cut(s)	1062
PshAI	GACNNNNGTC	1 cut(s)	651
Psp124BI	GAGCTC	1 cut(s)	1818
Psp5II	RGGWCCY	2 cut(s)	673, 1719
Psp6I	CCWGG	2 cut(s)	274, 1267
PspGI	CCWGG	2 cut(s)	274, 1267
PspN4I	GGNNCC	3 cut(s)	675, 1720, 1721
PspPI	GGNCC	5 cut(s)	281, 673, 1304, 1474, 1719
PspPPI	RGGWCCY	2 cut(s)	673, 1719
PstI	CTGCAG	1 cut(s)	844
PstNI	CAGNNNCTG	2 cut(s)	17, 1399
PsuI	RGATCY	3 cut(s)	1141, 1189, 1428
PsyI	GACNNNGTC	1 cut(s)	19
PvuII	CAGCTG	1 cut(s)	1973
RsaI	GTAC	3 cut(s)	377, 1300, 1808
RsaNI	GTAC	3 cut(s)	376, 1299, 1807
RseI	CAYNNNNRTG	4 cut(s)	476, 805, 1281, 1882
SacI	GAGCTC	1 cut(s)	1818
SaqAI	TTAA	6 cut(s)	78, 747, 821, 1470, 1586, 1623
Sau3AI	GATC	9 cut(s)	210, 331, 718, 964, 975, 1141, 1189, 1428, 1978
Sau96I	GGNCC	5 cut(s)	281, 673, 1304, 1474, 1719
SchI	GAGTC	6 cut(s)	29, 461, 554, 641, 903, 1572
ScrFI	CCNGG	4 cut(s)	242, 276, 816, 1269
SduI	GDGCHC	2 cut(s)	1818, 1965
SfaNI	GCATC	3 cut(s)	527, 809, 1537
SfcI	CTRYAG	2 cut(s)	840, 1974
SfuI	TTCGAA	3 cut(s)	1122, 1694, 1782
SinI	GGWCC	3 cut(s)	281, 673, 1719
SmiMI	CAYNNNNRTG	4 cut(s)	476, 805, 1281, 1882
SmlI	CTYRAG	4 cut(s)	247, 649, 1469, 1811
SmoI	CTYRAG	4 cut(s)	247, 649, 1469, 1811
SphI	GCATGC	2 cut(s)	1558, 1562
SseBI	AGGCCT	1 cut(s)	357
SsiI	CCGC	5 cut(s)	512, 836, 1139, 1724, 1881
SspMI	CTAG	4 cut(s)	146, 299, 1329, 2001
SstI	GAGCTC	1 cut(s)	1818
StuI	AGGCCT	1 cut(s)	357
StyD4I	CCNGG	4 cut(s)	240, 274, 814, 1267
StyI	CCWWGG	2 cut(s)	506, 2000
TaaI	ACNGT	2 cut(s)	74, 1774
TaqI	TCGA	9 cut(s)	294, 704, 1122, 1338, 1694, 1699, 1713, 1782, 2018
TauI	GCSGC	1 cut(s)	839
TfiI	GAWTC	6 cut(s)	8, 706, 1418, 1460, 1670, 1696
Tru1I	TTAA	6 cut(s)	78, 747, 821, 1470, 1586, 1623
Tru9I	TTAA	6 cut(s)	78, 747, 821, 1470, 1586, 1623
TscAI	CASTG	3 cut(s)	79, 604, 1897
TseFI	GTSAC	1 cut(s)	137
Tsp45I	GTSAC	1 cut(s)	137
TspDTI	ATGAA	5 cut(s)	243, 656, 864, 1512, 1587
TspGWI	ACGGA	2 cut(s)	440, 985
TspRI	CASTG	3 cut(s)	79, 604, 1897
Tth111I	GACNNNGTC	1 cut(s)	19
Vha464I	CTTAAG	1 cut(s)	1469
VpaK11BI	GGWCC	3 cut(s)	281, 673, 1719
XapI	RAATTY	3 cut(s)	166, 308, 2014
XceI	RCATGY	3 cut(s)	1066, 1558, 1562
XmaJI	CCTAGG	1 cut(s)	2000
XmnI	GAANNNNTTC	1 cut(s)	519
XspI	CTAG	4 cut(s)	146, 299, 1329, 2001
Zsp2I	ATGCAT	4 cut(s)	795, 802, 1560, 1639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.