Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003856

Physical Location & Seq

Genomic Coordinates Reverse (-)

36778162 .. 36781140

Gene Structure 2979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002597

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGTGGGAATCAGAGACTGAGTCAGCTGGAGGGAGAGATTATGGCAATGGAGATTTTAGTTTAAGCAAGCAGAGTGTTAAGAATGATGGGTTTGAACTAAAAGGCAATTCATGGTATGTTGCAACCGATATCCCAAGTGACCTGTTGGTTCAAGTTGGAGAAGTCAATTTTCACTTGCATAAGTATCCCTTGCTGTCAAGGAGTGGAAAGATGAACAGAATCATGTATGAATTACGAGACCCGGACTTAAGTAAGATGGTTTTGGATGACCTTCCTGGGGGACCTGAGGCCTTTGAGCTAGCTGCAAAGTTCTGCTATGGCATTTCTGTGGATCTGACAGCAGCCAACATTTCAGGCCTCAGATGTGCTGCAGAGTTCCTTGAAATGACAGAGGACTTGGAAGAAGGCAATCTTATTTTCAAAACCGAAGCATTTCTCAGCTATGTGGTTTTGTCCTCATGGAGAGATTCCATATTAGTGTTGAAAAGTTGTGAGAAGCTCTCACCGTGGGCTGAAAACCTTCAAATTGTTCGGAGATGCAGCGAGTCTATTGCTTGGAAAGCCTGTGCCAATCCAAAAGGGATACGATGGCCATATACTGGTAGTAAGCTAGCTCCAAAAGTTTCAAGCCCAAATTGGAGTGACGTGAAGGACTCAAGTCCAAGTAGAAACCAGCTGCTGCAAGTTCCTCCCGATTGGTGGTTTGAAGATGCTTCAATTCTTCGGATTGATCACTATGTCAAGGTTATTACTGCAATCAAGGTGAAGGGGATGAGATATGAACTGCTTGGAGCTGCAATAATGCACTATGCAGCTAAATGGCTCCCTATTATGATAAGTGAGCATGGCTCTGGGTTAACAGCTGATGAAGGAAGCAACAGCAGCAGTAGCAGTGGAAGCAGTTGGAAGGGTGGACTTCACATGATCGTGGCAGGAACTAAAGATAATGAGTCTTCAGCCGTTCAGGCCAAAGATCAACGGATGATCATCGAGAGCCTTATTAGCATAATTCCACCACAGAAGGACAGTGTCTCATGTAGCTTCCTTCTTCGGCTTCTGAGAATGGCAAACATGTTGAAAGTAGCACCTGCACTGGTTACTGAGTTGGAGACACGGGTGGGAATGCAGTTCGAACAGGCTACATTGGCGGATCTTCTCATTCCGTCTTACAACAAAAGCGAAACTATGTGTGATGTGGATCTTGTCCAGAGGCTTCTGGAGCATTTTCTTGTTCAAGAACAGACTGAAATGTCAAGTCCAAGCCAGCAATCTTTCATTGAAAAACACTATGAAAGGGGCACAGGCCCAAATGCTAAGATGAGGGTAGCCAAGCTTGTTGATAGTTATCTTACAGAGGTGTCAAGAGATAGAAGCCTTTCCCTAACAAAGTTTCAGGTACTCGCAGAAGCTTTGCCTGAATCTGCAAGGACCTGTGATGATGGACTTTATAGAGCAATTGATTCCTATCTCAAGGCTCATCCAACACTTTCTGAGCACGAAAGGAAGAGGCTATGCCGGGTGATGGATTGCCAAAAGCTATCGATTGATGCTTGCATGCATGCTGCACAAAATGAAAGGCTCCCATTAAGAGTGGTGGTGCAAGTTCTTTTCTCTGAGCAAGTCAAAATAAGCAATGCATTGGCCAACAATGCCCTTAATGAAGCCGGAGGAGACTCTAACTATCAGCCAATGATTCCAAATCGGAAAACACTACTCGAAGGGACCCCGCAATCCTTCCAAGAAGGATGGGCAGCAGCTAAAAAGGACATTAACACTGTAAAGTTTGAACTGGAGAGTGTAAAAGCAAAGTACCTTGATCTCCAAAATTCCATGGAAAACTTGCAGAGACAGTTCGATAAGATGACCTCAAAGCAGAAACATACATCAGCTTGGAGCAGCGGATGGAAGAAACTCGGCAAACTCACTAAGACTACAATGTTCGAGAATCAGAACAGTGGACCGGAGACTCCAACAGCGGGTGGTCCAGAGCAGACAAGAAAGACTCCTAGGAGGTGGAGGAATTCCATTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009987 GO:0016020 GO:0016567 GO:0019538 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0070647 GO:0071704 GO:0071944 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

678

Amino Acids

75.81

Weight (kDa)

6.67

Isoelectric Point (pI)

48.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	232 - 518	2.8e-98	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003856)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64330 AT5G64330 AT5G64330
fragaria_vesca	FvH4_5g25720 FvH4_5g25720 FvH4_5g25720
malus_domestica	MD05G1047100.v1.1 MD10G1053800.v1.1
prunus_persica	Prupe.8G067500_v2.0.a1 Prupe.8G067500_v2.0.a1
pyrus_communis	pycom10g04060
rosa_chinensis	RchiOBHm_Chr6g0271301 RchiOBHm_Chr7g0216061
rosa_laevigata	RLG00000002597 RLG00000013726
rosa_multiflora	Rmu_sc0002356.1_g000004 Rmu_sc0004866.1_g000011
rosa_roxburghii	Rroxscaffold_3G00243680 Rroxscaffold_7G00197120
rosa_rugosa	Rorug06G0059500 Rorug06G0059600 Rorug06G0059700 Rorug07G0158400 Rorug07G0158500 Rorug07G0158600
rosa_samantha	Rh6AG179400 Rh6BG182500 Rh6CG179400 Rh6DG171100 Rh7AG295600 Rh7CG316000
rosa_wichuraiana	Rw6G015410 Rw6G015430 Rw7G025140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1096
AasI	GACNNNNNNGTC	1 cut(s)	1249
Acc36I	ACCTGC	1 cut(s)	1096
AccB7I	CCANNNNNTGG	1 cut(s)	599
AciI	CCGC	4 cut(s)	1148, 1727, 1899, 1976
AclWI	GGATC	3 cut(s)	339, 1158, 1206
AcoI	YGGCCR	2 cut(s)	590, 1641
AcsI	RAATTY	2 cut(s)	1825, 2020
AcuI	CTGAAG	1 cut(s)	939
AfaI	GTAC	2 cut(s)	1398, 1811
AfiI	CCNNNNNNNGG	5 cut(s)	277, 599, 699, 1522, 1976
AflII	CTTAAG	1 cut(s)	247
AflIII	ACRYGT	1 cut(s)	1071
AjiI	CACGTC	1 cut(s)	646
AjnI	CCWGG	1 cut(s)	274
Alw21I	GWGCWC	1 cut(s)	1497
Alw26I	GTCTC	7 cut(s)	8, 231, 1036, 1103, 1665, 1840, 1958
AlwI	GGATC	3 cut(s)	339, 1158, 1206
AlwNI	CAGNNNCTG	2 cut(s)	17, 679
AoxI	GGCC	6 cut(s)	288, 355, 590, 966, 1303, 1641
ApoI	RAATTY	2 cut(s)	1825, 2020
Asp700I	GAANNNNTTC	3 cut(s)	432, 519, 1375
AspA2I	CCTAGG	1 cut(s)	2006
AspS9I	GGNCC	6 cut(s)	281, 1304, 1428, 1722, 1958, 1982
AsuC2I	CCSGG	2 cut(s)	242, 1517
AsuHPI	GGTGA	3 cut(s)	495, 775, 1531
AsuII	TTCGAA	1 cut(s)	1131
AsuNHI	GCTAGC	2 cut(s)	298, 610
AvaII	GGWCC	5 cut(s)	281, 1428, 1722, 1958, 1982
AvrII	CCTAGG	1 cut(s)	2006
AxyI	CCTNAGG	1 cut(s)	285
BaeGI	GKGCMC	1 cut(s)	1301
BalI	TGGCCA	2 cut(s)	592, 1643
BbsI	GAAGAC	1 cut(s)	945
Bbv12I	GWGCWC	1 cut(s)	1497
BccI	CCATC	7 cut(s)	80, 250, 582, 1433, 1516, 1740, 1896
BceAI	ACGGC	1 cut(s)	944
BcgI	CGANNNNNNTGC	2 cut(s)	533, 567
BciT130I	CCWGG	1 cut(s)	276
BciVI	GTATCC	2 cut(s)	195, 576
BclI	TGATCA	2 cut(s)	730, 984
BcnI	CCSGG	2 cut(s)	242, 1517
BcoDI	GTCTC	7 cut(s)	8, 231, 1036, 1103, 1665, 1840, 1958
BfaI	CTAG	3 cut(s)	299, 611, 2007
BfmI	CTRYAG	1 cut(s)	369
BfrI	CTTAAG	1 cut(s)	247
BfuAI	ACCTGC	1 cut(s)	1096
BfuI	GTATCC	2 cut(s)	195, 576
BglI	GCCNNNNNGGC	1 cut(s)	965
BlnI	CCTAGG	1 cut(s)	2006
Bme1390I	CCNGG	3 cut(s)	242, 276, 1517
Bme18I	GGWCC	5 cut(s)	281, 1428, 1722, 1958, 1982
BmgBI	CACGTC	1 cut(s)	646
BmgT120I	GGNCC	6 cut(s)	281, 1304, 1428, 1722, 1958, 1982
BmiI	GGNNCC	5 cut(s)	282, 824, 1580, 1723, 1724
BmrFI	CCNGG	3 cut(s)	242, 276, 1517
BmsI	GCATC	3 cut(s)	527, 700, 1537
BmtI	GCTAGC	2 cut(s)	302, 614
BoxI	GACNNNNGTC	1 cut(s)	657
BpiI	GAAGAC	1 cut(s)	945
BplI	GAGNNNNNCTC	4 cut(s)	485, 517, 833, 865
BpmI	CTGGAG	3 cut(s)	48, 1238, 1811
Bpu14I	TTCGAA	1 cut(s)	1131
BpuEI	CTTGAG	2 cut(s)	640, 1454
BpuMI	CCSGG	2 cut(s)	242, 1517
Bsa29I	ATCGAT	1 cut(s)	1541
BsaBI	GATNNNNATC	4 cut(s)	986, 1197, 1344, 1464
BsaI	GGTCTC	1 cut(s)	231
BsaJI	CCNNGG	4 cut(s)	275, 506, 1830, 2006
BsaWI	WCCGGW	1 cut(s)	1960
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 599, 699, 1522, 1976
Bse1I	ACTGG	3 cut(s)	604, 1098, 1794
Bse21I	CCTNAGG	1 cut(s)	285
Bse3DI	GCAATG	2 cut(s)	52, 1639
Bse8I	GATNNNNATC	4 cut(s)	986, 1197, 1344, 1464
BseBI	CCWGG	1 cut(s)	276
BseCI	ATCGAT	1 cut(s)	1541
BseDI	CCNNGG	4 cut(s)	275, 506, 1830, 2006
BseGI	GGATG	6 cut(s)	271, 777, 987, 1477, 1751, 1907
BseJI	GATNNNNATC	4 cut(s)	986, 1197, 1344, 1464
BseLI	CCNNNNNNNGG	5 cut(s)	277, 599, 699, 1522, 1976
BseMI	GCAATG	2 cut(s)	52, 1639
BseMII	CTCAG	8 cut(s)	9, 276, 373, 451, 1049, 1092, 1482, 1605
BseNI	ACTGG	3 cut(s)	604, 1098, 1794
BseRI	GAGGAG	1 cut(s)	1683
BseSI	GKGCMC	1 cut(s)	1301
BsgI	GTGCAG	2 cut(s)	1074, 1548
BshFI	GGCC	6 cut(s)	290, 357, 592, 968, 1305, 1643
BshVI	ATCGAT	1 cut(s)	1541
BsiHKAI	GWGCWC	1 cut(s)	1497
BsiSI	CCGG	4 cut(s)	242, 1516, 1665, 1961
BslFI	GGGAC	2 cut(s)	294, 1735
BslI	CCNNNNNNNGG	5 cut(s)	277, 599, 699, 1522, 1976
BsmAI	GTCTC	7 cut(s)	8, 231, 1036, 1103, 1665, 1840, 1958
BsmFI	GGGAC	2 cut(s)	294, 1735
BsmI	GAATGC	1 cut(s)	1128
BsnI	GGCC	6 cut(s)	290, 357, 592, 968, 1305, 1643
Bso31I	GGTCTC	1 cut(s)	231
Bsp119I	TTCGAA	1 cut(s)	1131
Bsp1286I	GDGCHC	2 cut(s)	1301, 1497
Bsp143I	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
Bsp19I	CCATGG	1 cut(s)	1830
BspACI	CCGC	4 cut(s)	1148, 1727, 1899, 1976
BspANI	GGCC	6 cut(s)	290, 357, 592, 968, 1305, 1643
BspCNI	CTCAG	8 cut(s)	10, 277, 372, 450, 1050, 1093, 1483, 1606
BspDI	ATCGAT	1 cut(s)	1541
BspLI	GGNNCC	5 cut(s)	282, 824, 1580, 1723, 1724
BspMAI	CTGCAG	1 cut(s)	373
BspMI	ACCTGC	1 cut(s)	1096
BspOI	GCTAGC	2 cut(s)	302, 614
BspPI	GGATC	3 cut(s)	339, 1158, 1206
BspT104I	TTCGAA	1 cut(s)	1131
BspTI	CTTAAG	1 cut(s)	247
BspTNI	GGTCTC	1 cut(s)	231
BsrDI	GCAATG	2 cut(s)	52, 1639
BsrI	ACTGG	3 cut(s)	604, 1098, 1794
BssECI	CCNNGG	4 cut(s)	275, 506, 1830, 2006
BssMI	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
BssT1I	CCWWGG	2 cut(s)	1830, 2006
Bst2UI	CCWGG	1 cut(s)	276
Bst4CI	ACNGT	5 cut(s)	507, 1028, 1777, 1851, 1955
Bst6I	CTCTTC	1 cut(s)	1499
BstAFI	CTTAAG	1 cut(s)	247
BstBI	TTCGAA	1 cut(s)	1131
BstC8I	GCNNGC	7 cut(s)	68, 300, 612, 1265, 1552, 1556, 1560
BstDSI	CCRYGG	2 cut(s)	506, 1830
BstF5I	GGATG	6 cut(s)	271, 777, 987, 1477, 1751, 1907
BstKTI	GATC	8 cut(s)	334, 733, 927, 976, 987, 1153, 1201, 1819
BstMAI	GTCTC	7 cut(s)	8, 231, 1036, 1103, 1665, 1840, 1958
BstMBI	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
BstMWI	GCNNNNNNNGC	9 cut(s)	560, 882, 888, 897, 965, 1002, 1145, 1219, 1649
BstNI	CCWGG	1 cut(s)	276
BstNSI	RCATGY	3 cut(s)	1075, 1558, 1562
BstPAI	GACNNNNGTC	1 cut(s)	657
BstSCI	CCNGG	3 cut(s)	240, 274, 1515
BstSFI	CTRYAG	1 cut(s)	369
BstSLI	GKGCMC	1 cut(s)	1301
BstV2I	GAAGAC	1 cut(s)	945
BstX2I	RGATCY	3 cut(s)	331, 1150, 1198
BstYI	RGATCY	3 cut(s)	331, 1150, 1198
Bsu15I	ATCGAT	1 cut(s)	1541
Bsu36I	CCTNAGG	1 cut(s)	285
BsuI	GTATCC	2 cut(s)	195, 576
BsuRI	GGCC	6 cut(s)	290, 357, 592, 968, 1305, 1643
BsuTUI	ATCGAT	1 cut(s)	1541
BtgI	CCRYGG	2 cut(s)	506, 1830
BtrI	CACGTC	1 cut(s)	646
BtsCI	GGATG	6 cut(s)	271, 777, 987, 1477, 1751, 1907
BtsI	GCAGTG	1 cut(s)	898
BtsIMutI	CAGTG	5 cut(s)	898, 1033, 1091, 1773, 1960
BveI	ACCTGC	1 cut(s)	1096
Cac8I	GCNNGC	7 cut(s)	68, 300, 612, 1265, 1552, 1556, 1560
CaiI	CAGNNNCTG	2 cut(s)	17, 679
Cfr13I	GGNCC	6 cut(s)	281, 1304, 1428, 1722, 1958, 1982
ClaI	ATCGAT	1 cut(s)	1541
Csp6I	GTAC	2 cut(s)	1397, 1810
CviQI	GTAC	2 cut(s)	1397, 1810
DpnI	GATC	8 cut(s)	333, 732, 926, 975, 986, 1152, 1200, 1818
DpnII	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
DrdI	GACNNNNNNGTC	1 cut(s)	1249
DseDI	GACNNNNNNGTC	1 cut(s)	1249
EaeI	YGGCCR	2 cut(s)	590, 1641
Eam1104I	CTCTTC	1 cut(s)	1499
EarI	CTCTTC	1 cut(s)	1499
EciI	GGCGGA	1 cut(s)	1163
Eco130I	CCWWGG	2 cut(s)	1830, 2006
Eco147I	AGGCCT	2 cut(s)	290, 357
Eco31I	GGTCTC	1 cut(s)	231
Eco32I	GATATC	1 cut(s)	130
Eco47I	GGWCC	5 cut(s)	281, 1428, 1722, 1958, 1982
Eco57I	CTGAAG	1 cut(s)	939
Eco81I	CCTNAGG	1 cut(s)	285
EcoO109I	RGGNCCY	3 cut(s)	281, 1428, 1722
EcoRI	GAATTC	1 cut(s)	2020
EcoRII	CCWGG	1 cut(s)	274
EcoRV	GATATC	1 cut(s)	130
EcoT14I	CCWWGG	2 cut(s)	1830, 2006
EcoT22I	ATGCAT	2 cut(s)	1560, 1639
ErhI	CCWWGG	2 cut(s)	1830, 2006
FalI	AAGNNNNNCTT	4 cut(s)	173, 205, 396, 428
FaqI	GGGAC	2 cut(s)	294, 1735
FauI	CCCGC	2 cut(s)	1734, 1969
FbaI	TGATCA	2 cut(s)	730, 984
FokI	GGATG	6 cut(s)	278, 784, 994, 1464, 1758, 1914
FspBI	CTAG	3 cut(s)	299, 611, 2007
GsuI	CTGGAG	3 cut(s)	48, 1238, 1811
HaeIII	GGCC	6 cut(s)	290, 357, 592, 968, 1305, 1643
HapII	CCGG	4 cut(s)	242, 1516, 1665, 1961
HincII	GTYRAC	1 cut(s)	858
HindII	GTYRAC	1 cut(s)	858
HindIII	AAGCTT	2 cut(s)	1331, 1407
HpaI	GTTAAC	1 cut(s)	858
HpaII	CCGG	4 cut(s)	242, 1516, 1665, 1961
HphI	GGTGA	3 cut(s)	495, 775, 1531
Hpy166II	GTNNAC	3 cut(s)	858, 914, 1958
Hpy188III	TCNNGA	8 cut(s)	692, 991, 1207, 1217, 1235, 1362, 1942, 1985
Hpy8I	GTNNAC	3 cut(s)	858, 914, 1958
HpyCH4III	ACNGT	5 cut(s)	507, 1028, 1777, 1851, 1955
HpyCH4IV	ACGT	1 cut(s)	645
HpyF10VI	GCNNNNNNNGC	9 cut(s)	560, 882, 888, 897, 965, 1002, 1145, 1219, 1649
HpySE526I	ACGT	1 cut(s)	645
KflI	GGGWCCC	1 cut(s)	1722
Ksp22I	TGATCA	2 cut(s)	730, 984
KspAI	GTTAAC	1 cut(s)	858
Kzo9I	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
LmnI	GCTCC	6 cut(s)	619, 791, 828, 1219, 1584, 1893
LweI	GCATC	3 cut(s)	527, 700, 1537
MaeI	CTAG	3 cut(s)	299, 611, 2007
MaeII	ACGT	1 cut(s)	645
MaeIII	GTNAC	3 cut(s)	137, 641, 1096
MalI	GATC	8 cut(s)	333, 732, 926, 975, 986, 1152, 1200, 1818
MboI	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
MboII	GAAGA	8 cut(s)	413, 713, 719, 945, 1040, 1145, 1516, 1918
MfeI	CAATTG	1 cut(s)	1455
MflI	RGATCY	3 cut(s)	331, 1150, 1198
MhlI	GDGCHC	2 cut(s)	1301, 1497
MlsI	TGGCCA	2 cut(s)	592, 1643
MluNI	TGGCCA	2 cut(s)	592, 1643
MlyI	GAGTC	7 cut(s)	29, 554, 647, 959, 1667, 1960, 1996
MmeI	TCCRAC	5 cut(s)	136, 884, 1086, 1505, 1994
Mox20I	TGGCCA	2 cut(s)	592, 1643
Mph1103I	ATGCAT	2 cut(s)	1560, 1639
MroXI	GAANNNNTTC	3 cut(s)	432, 519, 1375
MscI	TGGCCA	2 cut(s)	592, 1643
MseI	TTAA	7 cut(s)	62, 78, 248, 857, 1586, 1656, 1770
MslI	CAYNNNNRTG	3 cut(s)	326, 476, 926
Msp20I	TGGCCA	2 cut(s)	592, 1643
MspA1I	CMGCKG	5 cut(s)	26, 676, 863, 1899, 1976
MspCI	CTTAAG	1 cut(s)	247
MspI	CCGG	4 cut(s)	242, 1516, 1665, 1961
MspR9I	CCNGG	3 cut(s)	242, 276, 1517
MunI	CAATTG	1 cut(s)	1455
Mva1269I	GAATGC	1 cut(s)	1128
MvaI	CCWGG	1 cut(s)	276
MwoI	GCNNNNNNNGC	9 cut(s)	560, 882, 888, 897, 965, 1002, 1145, 1219, 1649
NciI	CCSGG	2 cut(s)	242, 1517
NcoI	CCATGG	1 cut(s)	1830
NdeII	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
NheI	GCTAGC	2 cut(s)	298, 610
NlaIV	GGNNCC	5 cut(s)	282, 824, 1580, 1723, 1724
NmeAIII	GCCGAG	1 cut(s)	1893
NmuCI	GTSAC	2 cut(s)	137, 641
NsiI	ATGCAT	2 cut(s)	1560, 1639
NspI	RCATGY	3 cut(s)	1075, 1558, 1562
NspV	TTCGAA	1 cut(s)	1131
PaeI	GCATGC	2 cut(s)	1558, 1562
PaqCI	CACCTGC	1 cut(s)	1096
PceI	AGGCCT	2 cut(s)	290, 357
PciI	ACATGT	1 cut(s)	1071
PctI	GAATGC	1 cut(s)	1128
PdmI	GAANNNNTTC	3 cut(s)	432, 519, 1375
PfeI	GAWTC	7 cut(s)	8, 219, 467, 1418, 1460, 1693, 1945
PflFI	GACNNNGTC	2 cut(s)	19, 1028
PflMI	CCANNNNNTGG	1 cut(s)	599
PleI	GAGTC	7 cut(s)	28, 553, 647, 958, 1667, 1960, 1996
PpsI	GAGTC	7 cut(s)	28, 553, 647, 958, 1667, 1960, 1996
PpuMI	RGGWCCY	3 cut(s)	281, 1428, 1722
PscI	ACATGT	1 cut(s)	1071
PshAI	GACNNNNGTC	1 cut(s)	657
Psp5II	RGGWCCY	3 cut(s)	281, 1428, 1722
Psp6I	CCWGG	1 cut(s)	274
PspGI	CCWGG	1 cut(s)	274
PspN4I	GGNNCC	5 cut(s)	282, 824, 1580, 1723, 1724
PspPI	GGNCC	6 cut(s)	281, 1304, 1428, 1722, 1958, 1982
PspPPI	RGGWCCY	3 cut(s)	281, 1428, 1722
PstI	CTGCAG	1 cut(s)	373
PstNI	CAGNNNCTG	2 cut(s)	17, 679
PsuI	RGATCY	3 cut(s)	331, 1150, 1198
PsyI	GACNNNGTC	2 cut(s)	19, 1028
PvuII	CAGCTG	3 cut(s)	26, 676, 863
RsaI	GTAC	2 cut(s)	1398, 1811
RsaNI	GTAC	2 cut(s)	1397, 1810
RseI	CAYNNNNRTG	3 cut(s)	326, 476, 926
SaqAI	TTAA	7 cut(s)	62, 78, 248, 857, 1586, 1656, 1770
Sau3AI	GATC	8 cut(s)	331, 730, 924, 973, 984, 1150, 1198, 1816
Sau96I	GGNCC	6 cut(s)	281, 1304, 1428, 1722, 1958, 1982
SchI	GAGTC	7 cut(s)	29, 554, 647, 959, 1667, 1960, 1996
ScrFI	CCNGG	3 cut(s)	242, 276, 1517
SduI	GDGCHC	2 cut(s)	1301, 1497
SfaNI	GCATC	3 cut(s)	527, 700, 1537
SfcI	CTRYAG	1 cut(s)	369
SfuI	TTCGAA	1 cut(s)	1131
SinI	GGWCC	5 cut(s)	281, 1428, 1722, 1958, 1982
SmiMI	CAYNNNNRTG	3 cut(s)	326, 476, 926
SmlI	CTYRAG	3 cut(s)	247, 655, 1469
SmoI	CTYRAG	3 cut(s)	247, 655, 1469
SphI	GCATGC	2 cut(s)	1558, 1562
SseBI	AGGCCT	2 cut(s)	290, 357
SsiI	CCGC	4 cut(s)	1148, 1727, 1899, 1976
SspMI	CTAG	3 cut(s)	299, 611, 2007
StuI	AGGCCT	2 cut(s)	290, 357
StyD4I	CCNGG	3 cut(s)	240, 274, 1515
StyI	CCWWGG	2 cut(s)	1830, 2006
TaaI	ACNGT	5 cut(s)	507, 1028, 1777, 1851, 1955
TaiI	ACGT	1 cut(s)	648
TaqI	TCGA	6 cut(s)	990, 1131, 1541, 1716, 1854, 1941
TfiI	GAWTC	7 cut(s)	8, 219, 467, 1418, 1460, 1693, 1945
Tru1I	TTAA	7 cut(s)	62, 78, 248, 857, 1586, 1656, 1770
Tru9I	TTAA	7 cut(s)	62, 78, 248, 857, 1586, 1656, 1770
TscAI	CASTG	5 cut(s)	898, 1033, 1098, 1780, 1960
TseFI	GTSAC	2 cut(s)	137, 641
Tsp45I	GTSAC	2 cut(s)	137, 641
TspDTI	ATGAA	9 cut(s)	99, 227, 243, 795, 882, 1264, 1305, 1587, 1674
TspGWI	ACGGA	2 cut(s)	994, 1152
TspRI	CASTG	5 cut(s)	898, 1033, 1098, 1780, 1960
Tth111I	GACNNNGTC	2 cut(s)	19, 1028
Van91I	CCANNNNNTGG	1 cut(s)	599
Vha464I	CTTAAG	1 cut(s)	247
VpaK11BI	GGWCC	5 cut(s)	281, 1428, 1722, 1958, 1982
XapI	RAATTY	2 cut(s)	1825, 2020
XceI	RCATGY	3 cut(s)	1075, 1558, 1562
XmaJI	CCTAGG	1 cut(s)	2006
XmnI	GAANNNNTTC	3 cut(s)	432, 519, 1375
XspI	CTAG	3 cut(s)	299, 611, 2007
Zsp2I	ATGCAT	2 cut(s)	1560, 1639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.