Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005690

Physical Location & Seq

Genomic Coordinates Reverse (-)

9965870 .. 9967675

Gene Structure 1806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G067900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 339 bp

ATGGGAGTGGAGAGGGAAGTCGTGAGTGCTGGAACCGGTCCAAAACCGACCGTCGGTCAGAAGGTCACCGTTCATTGCACTGGTTACGGAAAAAATGGTGATCTGAGTCAGAAGTTTTGGAGTACGAAGGACCCTGGGCAGAATCCTTTCAGCTTCCAAATTGGGAAGGGTGCTGTTATAAAAGGATGGGATGAAGGTGTGCTCCAAATGCAAGTGGGAGAAGTTGCTCGTCTACGGTGCTCTCCAGATTATGCTTATGGTGCTAACGGATTTGGTGCATGGGGGATACAACCTAATTCGGCTTTGGTTTTTGAGATTGAAGTCCTCGGTGCGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

113

Amino Acids

11.91

Weight (kDa)

5.8

Isoelectric Point (pI)

13.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005690)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64350
fragaria_vesca	FvH4_2g11800 FvH4_3g22200 FvH4_3g22200
malus_domestica	MD04G1047400.v1.1
prunus_persica	Prupe.8G067900_v2.0.a1
pyrus_communis	pycom04g04150
rosa_chinensis	RchiOBHm_Chr5g0038161 RchiOBHm_Chr6g0249601
rosa_laevigata	RLG00000013725 RLG00000033836
rosa_multiflora	Rmu_sc0002670.1_g000002 Rmu_sc0006936.1_g000013 Rmu_sc0013555.1_g000001 Rmu_sc0032351.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042820 Rroxscaffold_1G00042830 Rroxscaffold_7G00197140
rosa_rugosa	Rorug05G0171100 Rorug06G0059300 Rorug06G0059400
rosa_samantha	Rh5BG262100 Rh5CG294200 Rh5DG271200 Rh6AG003800 Rh6BG006400
rosa_wichuraiana	Rw5G024200 Rw6G000420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	179
AccI	GTMKAC	1 cut(s)	232
AciI	CCGC	1 cut(s)	332
AfaI	GTAC	1 cut(s)	124
AfiI	CCNNNNNNNGG	2 cut(s)	53, 331
AgeI	ACCGGT	1 cut(s)	35
AgsI	TTSAA	1 cut(s)	320
AhdI	GACNNNNNGTC	1 cut(s)	54
AjnI	CCWGG	1 cut(s)	133
AluBI	AGCT	1 cut(s)	153
AluI	AGCT	1 cut(s)	153
Alw21I	GWGCWC	2 cut(s)	204, 242
AsiGI	ACCGGT	1 cut(s)	35
Asp700I	GAANNNNTTC	1 cut(s)	146
AspS9I	GGNCC	2 cut(s)	38, 130
AsuHPI	GGTGA	2 cut(s)	58, 110
AvaII	GGWCC	2 cut(s)	38, 130
Bbv12I	GWGCWC	2 cut(s)	204, 242
BccI	CCATC	1 cut(s)	180
BciT130I	CCWGG	1 cut(s)	135
BciVI	GTATCC	1 cut(s)	279
BfuI	GTATCC	1 cut(s)	279
Bme1390I	CCNGG	1 cut(s)	135
Bme18I	GGWCC	2 cut(s)	38, 130
BmeRI	GACNNNNNGTC	1 cut(s)	54
BmgT120I	GGNCC	2 cut(s)	38, 130
BmiI	GGNNCC	2 cut(s)	34, 132
BmrFI	CCNGG	1 cut(s)	135
BpmI	CTGGAG	1 cut(s)	228
BsaJI	CCNNGG	3 cut(s)	133, 134, 325
BsaWI	WCCGGW	1 cut(s)	35
Bsc4I	CCNNNNNNNGG	2 cut(s)	53, 331
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	1 cut(s)	85
Bse3DI	GCAATG	1 cut(s)	73
BseBI	CCWGG	1 cut(s)	135
BseDI	CCNNGG	3 cut(s)	133, 134, 325
BseGI	GGATG	2 cut(s)	191, 196
BseLI	CCNNNNNNNGG	2 cut(s)	53, 331
BseMI	GCAATG	1 cut(s)	73
BseMII	CTCAG	1 cut(s)	95
BseNI	ACTGG	1 cut(s)	85
Bsh1285I	CGRYCG	1 cut(s)	51
BshTI	ACCGGT	1 cut(s)	35
BsiEI	CGRYCG	1 cut(s)	51
BsiHKAI	GWGCWC	2 cut(s)	204, 242
BsiSI	CCGG	1 cut(s)	36
BslI	CCNNNNNNNGG	2 cut(s)	53, 331
Bsp1286I	GDGCHC	2 cut(s)	204, 242
Bsp143I	GATC	1 cut(s)	100
BspACI	CCGC	1 cut(s)	332
BspCNI	CTCAG	1 cut(s)	96
BspLI	GGNNCC	2 cut(s)	34, 132
BsrDI	GCAATG	1 cut(s)	73
BsrFI	RCCGGY	1 cut(s)	35
BsrI	ACTGG	1 cut(s)	85
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	3 cut(s)	133, 134, 325
BssMI	GATC	1 cut(s)	100
Bst2UI	CCWGG	1 cut(s)	135
Bst4CI	ACNGT	3 cut(s)	52, 70, 237
BstDEI	CTNAG	1 cut(s)	104
BstEII	GGTNACC	1 cut(s)	64
BstF5I	GGATG	2 cut(s)	191, 196
BstKTI	GATC	1 cut(s)	103
BstMBI	GATC	1 cut(s)	100
BstMCI	CGRYCG	1 cut(s)	51
BstMWI	GCNNNNNNNGC	2 cut(s)	208, 260
BstNI	CCWGG	1 cut(s)	135
BstPI	GGTNACC	1 cut(s)	64
BstSCI	CCNGG	1 cut(s)	133
BsuI	GTATCC	1 cut(s)	279
BtsCI	GGATG	2 cut(s)	191, 196
BtsIMutI	CAGTG	1 cut(s)	78
Cfr10I	RCCGGY	1 cut(s)	35
Cfr13I	GGNCC	2 cut(s)	38, 130
Csp6I	GTAC	1 cut(s)	123
CspAI	ACCGGT	1 cut(s)	35
CviAII	CATG	1 cut(s)	279
CviJI	RGCY	2 cut(s)	153, 302
CviKI_1	RGCY	2 cut(s)	153, 302
CviQI	GTAC	1 cut(s)	123
DdeI	CTNAG	1 cut(s)	104
DpnI	GATC	1 cut(s)	102
DpnII	GATC	1 cut(s)	100
DriI	GACNNNNNGTC	1 cut(s)	54
Eam1105I	GACNNNNNGTC	1 cut(s)	54
Eco47I	GGWCC	2 cut(s)	38, 130
Eco91I	GGTNACC	1 cut(s)	64
EcoO109I	RGGNCCY	1 cut(s)	130
EcoO65I	GGTNACC	1 cut(s)	64
EcoRII	CCWGG	1 cut(s)	133
FaeI	CATG	1 cut(s)	282
FaiI	YATR	4 cut(s)	179, 252, 258, 280
FatI	CATG	1 cut(s)	278
FblI	GTMKAC	1 cut(s)	232
FokI	GGATG	2 cut(s)	198, 203
GsuI	CTGGAG	1 cut(s)	228
HapII	CCGG	1 cut(s)	36
Hin1II	CATG	1 cut(s)	282
HinfI	GANTC	2 cut(s)	106, 142
HpaII	CCGG	1 cut(s)	36
HphI	GGTGA	2 cut(s)	58, 110
Hpy166II	GTNNAC	1 cut(s)	233
Hpy188I	TCNGA	3 cut(s)	60, 105, 111
Hpy188III	TCNNGA	2 cut(s)	22, 245
Hpy8I	GTNNAC	1 cut(s)	233
Hpy99I	CGWCG	1 cut(s)	56
HpyAV	CCTTC	4 cut(s)	55, 121, 160, 188
HpyCH4III	ACNGT	3 cut(s)	52, 70, 237
HpyCH4V	TGCA	3 cut(s)	78, 211, 278
HpyF10VI	GCNNNNNNNGC	2 cut(s)	208, 260
HpyF3I	CTNAG	1 cut(s)	104
Hsp92II	CATG	1 cut(s)	282
Kzo9I	GATC	1 cut(s)	100
LmnI	GCTCC	1 cut(s)	207
LpnPI	CCDG	6 cut(s)	15, 49, 66, 120, 147, 258
MaeIII	GTNAC	2 cut(s)	64, 83
MalI	GATC	1 cut(s)	102
MboI	GATC	1 cut(s)	100
MhlI	GDGCHC	2 cut(s)	204, 242
MluCI	AATT	2 cut(s)	159, 295
MlyI	GAGTC	1 cut(s)	115
MnlI	CCTC	2 cut(s)	6, 335
MroXI	GAANNNNTTC	1 cut(s)	146
MspI	CCGG	1 cut(s)	36
MspR9I	CCNGG	1 cut(s)	135
MvaI	CCWGG	1 cut(s)	135
MwoI	GCNNNNNNNGC	2 cut(s)	208, 260
NdeII	GATC	1 cut(s)	100
NlaIII	CATG	1 cut(s)	282
NlaIV	GGNNCC	2 cut(s)	34, 132
NmuCI	GTSAC	1 cut(s)	64
PasI	CCCWGGG	1 cut(s)	134
PdmI	GAANNNNTTC	1 cut(s)	146
PfeI	GAWTC	1 cut(s)	142
PinAI	ACCGGT	1 cut(s)	35
PleI	GAGTC	1 cut(s)	114
PpsI	GAGTC	1 cut(s)	114
PpuMI	RGGWCCY	1 cut(s)	130
PsiI	TTATAA	1 cut(s)	179
Psp5II	RGGWCCY	1 cut(s)	130
Psp6I	CCWGG	1 cut(s)	133
PspEI	GGTNACC	1 cut(s)	64
PspGI	CCWGG	1 cut(s)	133
PspN4I	GGNNCC	2 cut(s)	34, 132
PspPI	GGNCC	2 cut(s)	38, 130
PspPPI	RGGWCCY	1 cut(s)	130
RsaI	GTAC	1 cut(s)	124
RsaNI	GTAC	1 cut(s)	123
Sau3AI	GATC	1 cut(s)	100
Sau96I	GGNCC	2 cut(s)	38, 130
SchI	GAGTC	1 cut(s)	115
ScrFI	CCNGG	1 cut(s)	135
SduI	GDGCHC	2 cut(s)	204, 242
SetI	ASST	4 cut(s)	66, 155, 199, 295
SinI	GGWCC	2 cut(s)	38, 130
Sse9I	AATT	2 cut(s)	159, 295
SsiI	CCGC	1 cut(s)	332
StyD4I	CCNGG	1 cut(s)	133
TaaI	ACNGT	3 cut(s)	52, 70, 237
TaqII	GACCGA	1 cut(s)	44
TasI	AATT	2 cut(s)	159, 295
TfiI	GAWTC	1 cut(s)	142
TscAI	CASTG	1 cut(s)	85
TseFI	GTSAC	1 cut(s)	64
Tsp45I	GTSAC	1 cut(s)	64
TspDTI	ATGAA	2 cut(s)	62, 207
TspGWI	ACGGA	2 cut(s)	102, 282
TspRI	CASTG	1 cut(s)	85
VpaK11BI	GGWCC	2 cut(s)	38, 130
XmiI	GTMKAC	1 cut(s)	232
XmnI	GAANNNNTTC	1 cut(s)	146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.