Prupe.8G098700_v2.0.a1

BURP domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0007143
Physical Location & Seq
Forward (+)
13033250 .. 13034617
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G098700.1

Sequence Viewer

Length: 903 bp
ATGAACAAAATGGCAAGGACTTTTAACAAGGGAAGAAACATGGCTTCCGGACTTGCTCTCTGGAGCCCCTTACTTCATTTACTGGTGCTTGTTATGTGTATTCAAGGAACTGGAGGCAGGAAGATGAGTGAAACACAAGATGGTGATGGCCATGAAACAACACATACAGAGCATGCTCATGCTCATCATCCATCATCCCACATGCATCATCACATGGACCCTTCATTTATGATTTTCTTCACCTTCGAGGACCTAAAGGAGGGCAAAACCAGGGCCATCTATTTTCCCAAAATAAACCCTTCAAAATCTCCCCACTTGTTACCAAGAGAAGAAGCTGATCAAATTCCTTTCTCATCAAAACAACTCCTCCACCTCCTTCACTTCTTCTCCTTCTCTCAAGACTCTCCCCAAGCCAAGGCCATGGAAGACACTCTCAGGCAGTGTGAGATTGAACCCATCAAGGGAGAGATCAAGTCCTGTGCTACATCCCTAGAATCCATGCTTGACTTCACACGTGGCGTCTTCGGATTGGACACCCCTTTCAGTGTTGTGGCCACAACCCATCTCACAAATTCAACTACCAATTTCCAGAACTACACTATTTTGGAAGAGCCCAAGGAGATTTTGGCTCCCAAGATGGTGGCTTGCCACACCATGTCTTACCCTTACGTAGTTTTCTACTGCCACAGCCAAAAAAGTGTGAACAAGGTTTTCAAGGTTTTGTTGGGTGGTGAGGATGGAGATAGGGTAGAAGCTGTTGCTGTTTGTCACTTGGACACCTCTCAATGGAGCCCTAATCATGCATCTTTCAGTGTGCTTAGGACTAAGCCAGGAGCTTCTGCTGTGTGTCATTTCTTTCCTGCTGATAATCTTGTGTGGGTTCCAGCATCCACTTCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BURP

Protein Analysis

301

Amino Acids

33.6

Weight (kDa)

6.56

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 47
AcoI YGGCCR 2 cut(s) 148, 552
AcsI RAATTY 2 cut(s) 342, 571
AcvI CACGTG 1 cut(s) 515
AcyI GRCGYC 1 cut(s) 519
AfiI CCNNNNNNNGG 4 cut(s) 259, 415, 461, 786
AflIII ACRYGT 1 cut(s) 512
AgsI TTSAA 6 cut(s) 104, 303, 452, 576, 715, 897
AjnI CCWGG 2 cut(s) 269, 829
AluBI AGCT 3 cut(s) 335, 755, 836
AluI AGCT 3 cut(s) 335, 755, 836
Aor13HI TCCGGA 1 cut(s) 47
AoxI GGCC 4 cut(s) 148, 273, 417, 552
ApoI RAATTY 2 cut(s) 342, 571
AspS9I GGNCC 3 cut(s) 217, 250, 273
AsuHPI GGTGA 3 cut(s) 155, 232, 743
AvaII GGWCC 2 cut(s) 217, 250
BalI TGGCCA 2 cut(s) 150, 554
BanII GRGCYC 3 cut(s) 68, 615, 794
BbrPI CACGTG 1 cut(s) 515
BbsI GAAGAC 2 cut(s) 432, 514
BccI CCATC 8 cut(s) 134, 140, 199, 284, 464, 570, 631, 731
BciT130I CCWGG 2 cut(s) 271, 831
BclI TGATCA 1 cut(s) 337
BfaI CTAG 1 cut(s) 491
Bme1390I CCNGG 2 cut(s) 271, 831
Bme18I GGWCC 2 cut(s) 217, 250
BmgT120I GGNCC 3 cut(s) 217, 250, 273
BmiI GGNNCC 5 cut(s) 65, 219, 630, 791, 882
BmrFI CCNGG 2 cut(s) 271, 831
BmsI GCATC 3 cut(s) 214, 812, 896
BpiI GAAGAC 2 cut(s) 432, 514
BpmI CTGGAG 2 cut(s) 82, 132
Bpu10I CCTNAGC 1 cut(s) 818
BpuEI CTTGAG 1 cut(s) 381
BsaAI YACGTR 2 cut(s) 515, 670
BsaHI GRCGYC 1 cut(s) 519
BsaJI CCNNGG 4 cut(s) 270, 414, 420, 615
BsaWI WCCGGW 1 cut(s) 47
BsaXI ACNNNNNCTCC 6 cut(s) 351, 371, 381, 401, 732, 762
Bsc4I CCNNNNNNNGG 4 cut(s) 259, 415, 461, 786
Bse1I ACTGG 2 cut(s) 87, 115
BseAI TCCGGA 1 cut(s) 47
BseBI CCWGG 2 cut(s) 271, 831
BseDI CCNNGG 4 cut(s) 270, 414, 420, 615
BseGI GGATG 5 cut(s) 187, 194, 485, 742, 887
BseLI CCNNNNNNNGG 4 cut(s) 259, 415, 461, 786
BseMII CTCAG 1 cut(s) 448
BseNI ACTGG 2 cut(s) 87, 115
BseRI GAGGAG 1 cut(s) 356
BshFI GGCC 4 cut(s) 150, 275, 419, 554
BsiSI CCGG 1 cut(s) 48
BslI CCNNNNNNNGG 4 cut(s) 259, 415, 461, 786
BsnI GGCC 4 cut(s) 150, 275, 419, 554
Bsp1286I GDGCHC 3 cut(s) 68, 615, 794
Bsp13I TCCGGA 1 cut(s) 47
Bsp143I GATC 2 cut(s) 337, 468
Bsp19I CCATGG 1 cut(s) 420
BspANI GGCC 4 cut(s) 150, 275, 419, 554
BspCNI CTCAG 1 cut(s) 447
BspEI TCCGGA 1 cut(s) 47
BspLI GGNNCC 5 cut(s) 65, 219, 630, 791, 882
BspQI GCTCTTC 1 cut(s) 603
BsrI ACTGG 2 cut(s) 87, 115
BssECI CCNNGG 4 cut(s) 270, 414, 420, 615
BssMI GATC 2 cut(s) 337, 468
BssNI GRCGYC 1 cut(s) 519
BssT1I CCWWGG 3 cut(s) 414, 420, 615
Bst2UI CCWGG 2 cut(s) 271, 831
Bst6I CTCTTC 1 cut(s) 603
BstACI GRCGYC 1 cut(s) 519
BstBAI YACGTR 2 cut(s) 515, 670
BstC8I GCNNGC 2 cut(s) 174, 646
BstDEI CTNAG 3 cut(s) 434, 818, 825
BstDSI CCRYGG 1 cut(s) 420
BstENI CCTNNNNNAGG 1 cut(s) 257
BstF5I GGATG 5 cut(s) 187, 194, 485, 742, 887
BstKTI GATC 2 cut(s) 340, 471
BstMBI GATC 2 cut(s) 337, 468
BstNI CCWGG 2 cut(s) 271, 831
BstNSI RCATGY 2 cut(s) 176, 205
BstSCI CCNGG 2 cut(s) 269, 829
BstSNI TACGTA 1 cut(s) 670
BstV2I GAAGAC 2 cut(s) 432, 514
BstXI CCANNNNNNTGG 2 cut(s) 421, 640
BsuRI GGCC 4 cut(s) 150, 275, 419, 554
BtgI CCRYGG 1 cut(s) 420
BtsCI GGATG 5 cut(s) 187, 194, 485, 742, 887
BtsI GCAGTG 1 cut(s) 446
BtsIMutI CAGTG 3 cut(s) 446, 550, 817
Cac8I GCNNGC 2 cut(s) 174, 646
Cfr13I GGNCC 3 cut(s) 217, 250, 273
CseI GACGC 1 cut(s) 508
DdeI CTNAG 3 cut(s) 434, 818, 825
DpnI GATC 2 cut(s) 339, 470
DpnII GATC 2 cut(s) 337, 468
EaeI YGGCCR 2 cut(s) 148, 552
Eam1104I CTCTTC 1 cut(s) 603
EarI CTCTTC 1 cut(s) 603
Eco105I TACGTA 1 cut(s) 670
Eco130I CCWWGG 3 cut(s) 414, 420, 615
Eco24I GRGCYC 3 cut(s) 68, 615, 794
Eco47I GGWCC 2 cut(s) 217, 250
Eco72I CACGTG 1 cut(s) 515
EcoNI CCTNNNNNAGG 1 cut(s) 257
EcoO109I RGGNCCY 1 cut(s) 250
EcoRII CCWGG 2 cut(s) 269, 829
EcoT14I CCWWGG 3 cut(s) 414, 420, 615
EcoT22I ATGCAT 2 cut(s) 207, 805
EcoT38I GRGCYC 3 cut(s) 68, 615, 794
ErhI CCWWGG 3 cut(s) 414, 420, 615
FbaI TGATCA 1 cut(s) 337
FokI GGATG 5 cut(s) 174, 181, 472, 749, 874
FriOI GRGCYC 3 cut(s) 68, 615, 794
FspBI CTAG 1 cut(s) 491
GsuI CTGGAG 2 cut(s) 82, 132
HaeIII GGCC 4 cut(s) 150, 275, 419, 554
HapII CCGG 1 cut(s) 48
HgaI GACGC 1 cut(s) 508
Hin1I GRCGYC 1 cut(s) 519
HinfI GANTC 2 cut(s) 401, 494
HpaII CCGG 1 cut(s) 48
HphI GGTGA 3 cut(s) 155, 232, 743
Hpy166II GTNNAC 1 cut(s) 703
Hpy188I TCNGA 1 cut(s) 527
Hpy188III TCNNGA 4 cut(s) 48, 61, 398, 589
Hpy8I GTNNAC 1 cut(s) 703
HpyAV CCTTC 5 cut(s) 231, 253, 309, 386, 400
HpyCH4IV ACGT 2 cut(s) 514, 669
HpyCH4V TGCA 2 cut(s) 205, 803
HpyF3I CTNAG 3 cut(s) 434, 818, 825
HpySE526I ACGT 2 cut(s) 514, 669
Hsp92I GRCGYC 1 cut(s) 519
Kpn2I TCCGGA 1 cut(s) 47
Ksp22I TGATCA 1 cut(s) 337
Kzo9I GATC 2 cut(s) 337, 468
LguI GCTCTTC 1 cut(s) 603
LmnI GCTCC 4 cut(s) 63, 634, 789, 833
LweI GCATC 3 cut(s) 214, 812, 896
MaeI CTAG 1 cut(s) 491
MaeII ACGT 2 cut(s) 514, 669
MaeIII GTNAC 2 cut(s) 318, 767
MalI GATC 2 cut(s) 339, 470
MboI GATC 2 cut(s) 337, 468
MboII GAAGA 8 cut(s) 45, 133, 229, 341, 376, 437, 514, 620
MhlI GDGCHC 3 cut(s) 68, 615, 794
MlsI TGGCCA 2 cut(s) 150, 554
MluCI AATT 3 cut(s) 342, 571, 583
MluNI TGGCCA 2 cut(s) 150, 554
MlyI GAGTC 1 cut(s) 395
MnlI CCTC 7 cut(s) 107, 241, 253, 377, 383, 727, 790
Mox20I TGGCCA 2 cut(s) 150, 554
Mph1103I ATGCAT 2 cut(s) 207, 805
MroI TCCGGA 1 cut(s) 47
MscI TGGCCA 2 cut(s) 150, 554
MseI TTAA 1 cut(s) 24
MslI CAYNNNNRTG 2 cut(s) 177, 896
Msp20I TGGCCA 2 cut(s) 150, 554
MspI CCGG 1 cut(s) 48
MspR9I CCNGG 2 cut(s) 271, 831
MvaI CCWGG 2 cut(s) 271, 831
NcoI CCATGG 1 cut(s) 420
NdeII GATC 2 cut(s) 337, 468
NlaIV GGNNCC 5 cut(s) 65, 219, 630, 791, 882
NmuCI GTSAC 1 cut(s) 767
NsiI ATGCAT 2 cut(s) 207, 805
NspI RCATGY 2 cut(s) 176, 205
PaeI GCATGC 1 cut(s) 176
PciSI GCTCTTC 1 cut(s) 603
PfeI GAWTC 1 cut(s) 494
PleI GAGTC 1 cut(s) 395
PmaCI CACGTG 1 cut(s) 515
PmlI CACGTG 1 cut(s) 515
PpsI GAGTC 1 cut(s) 395
Ppu21I YACGTR 2 cut(s) 515, 670
PpuMI RGGWCCY 1 cut(s) 250
Psp5II RGGWCCY 1 cut(s) 250
Psp6I CCWGG 2 cut(s) 269, 829
PspCI CACGTG 1 cut(s) 515
PspGI CCWGG 2 cut(s) 269, 829
PspN4I GGNNCC 5 cut(s) 65, 219, 630, 791, 882
PspPI GGNCC 3 cut(s) 217, 250, 273
PspPPI RGGWCCY 1 cut(s) 250
RseI CAYNNNNRTG 2 cut(s) 177, 896
SapI GCTCTTC 1 cut(s) 603
SaqAI TTAA 1 cut(s) 24
Sau3AI GATC 2 cut(s) 337, 468
Sau96I GGNCC 3 cut(s) 217, 250, 273
SchI GAGTC 1 cut(s) 395
ScrFI CCNGG 2 cut(s) 271, 831
SduI GDGCHC 3 cut(s) 68, 615, 794
SfaNI GCATC 3 cut(s) 214, 812, 896
SinI GGWCC 2 cut(s) 217, 250
SmiMI CAYNNNNRTG 2 cut(s) 177, 896
SmlI CTYRAG 1 cut(s) 396
SmoI CTYRAG 1 cut(s) 396
SnaBI TACGTA 1 cut(s) 670
SphI GCATGC 1 cut(s) 176
Sse9I AATT 3 cut(s) 342, 571, 583
SspMI CTAG 1 cut(s) 491
StyD4I CCNGG 2 cut(s) 269, 829
StyI CCWWGG 3 cut(s) 414, 420, 615
TaiI ACGT 2 cut(s) 517, 672
TaqI TCGA 1 cut(s) 246
TasI AATT 3 cut(s) 342, 571, 583
TfiI GAWTC 1 cut(s) 494
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TscAI CASTG 3 cut(s) 446, 550, 817
TseFI GTSAC 1 cut(s) 767
Tsp45I GTSAC 1 cut(s) 767
TspDTI ATGAA 4 cut(s) 17, 65, 168, 213
TspRI CASTG 3 cut(s) 446, 550, 817
VpaK11BI GGWCC 2 cut(s) 217, 250
XagI CCTNNNNNAGG 1 cut(s) 257
XapI RAATTY 2 cut(s) 342, 571
XceI RCATGY 2 cut(s) 176, 205
XcmI CCANNNNNNNNNTGG 1 cut(s) 622
XspI CTAG 1 cut(s) 491
Zsp2I ATGCAT 2 cut(s) 207, 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.