Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007143

Physical Location & Seq

Genomic Coordinates Forward (+)

13113621 .. 13115021

Gene Structure 1401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G099700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 903 bp

ATGAACAAAGTGGCGAGGACTTTTAACAAGGGAAGAAACATGCCTTCAGGACTTGCTCTTTGGAGCCCCTTACTTCATCTACTTGTTCTTGTTGTGTGTGTTCAAGGAACTGGAGGCAGGAAGATGAGTGAAACACTAGATGGTGATGGCCATGAAACAACACATACAGAGCATGCTCATGCTCATCATCCATCATCCCACATGCATCATCACATGGACCCTTCAGTTATGATTTTCTTCACCTTGGAGGATCTAAAGGAGGGCAAAACCATGGCCATCTATTTTCCCAAAAGAAACCCTTCAAAATCCCCCCACTTGTTACCAAGAGAAGAAGCTGATCAAATTCCTTTCTCATCAAAACAACTCCTCCACCTCCTTCACTTCTTCTCCTTCTCTCAAGACTCTCCCCAAGCCAAGGCCATGGAAGACACTCTCAGGGAGTGTGAGATTGAACCCATCAAGGGAGAGATCAAGTCCTGTGCTACTTCCCTAGAATCCATGCTTGACTTCACACGTGGCGTCTTCGGACTGGAATCCCCTTTCAGTGTTGTAGCCACAACCCATCTCACAAATTCAACTACCAATTTCCAGAACTACACTATTTTGGAAGAGCCTAAGGAGATTTTGGCTCCCAAGATGGTGGCTTGCCACACCATGCCTTACCCTTATGCAGTTTTCTACTGCCACAGCCAGCAAAGTGTGAACAAGGTTTTCAAGGTTTTGTTGGGTGGTGAGGATGGAGATAGGGTAGAAGCTGTTGCTGTTTGTCACTTGGACACCTCTCAATGGAGCCCTAATCATGCATCTTTCAGCGTGCTTAGAACTAAACCAGGGGCTTCTGCTGTGTGTCATTTCTTTCCTGCTGATAATCTTGTGTGGGTTCAAGCATCCACTTCAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BURP

Protein Analysis

301

Amino Acids

33.49

Weight (kDa)

6.36

Isoelectric Point (pI)

60.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49320
fragaria_vesca	FvH4_2g08510 FvH4_2g08530
malus_domestica	MD05G1068000.v1.1 MD10G1077900.v1.1 MD10G1078000.v1.1
prunus_persica	Prupe.8G098700_v2.0.a1 Prupe.8G098900_v2.0.a1 Prupe.8G099700_v2.0.a1 Prupe.8G099900_v2.0.a1
pyrus_communis	pycom05g05900 pycom10g06110 pycom10g06130 pycom289g00010
rosa_chinensis	RchiOBHm_Chr6g0263891
rosa_laevigata	RLG00000014306
rosa_multiflora	Rmu_sc0002112.1_g000012
rosa_roxburghii	Rroxscaffold_176G00431280 Rroxscaffold_7G00203800
rosa_rugosa	Rorug06G0006700
rosa_samantha	Rh6AG126700 Rh6BG123000 Rh6CG121400 Rh6DG108900
rosa_wichuraiana	Rw6G011010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	1 cut(s)	258
AcoI	YGGCCR	2 cut(s)	148, 273
AcsI	RAATTY	2 cut(s)	342, 571
AcuI	CTGAAG	2 cut(s)	30, 207
AcvI	CACGTG	1 cut(s)	515
AcyI	GRCGYC	1 cut(s)	519
AfiI	CCNNNNNNNGG	3 cut(s)	415, 461, 786
AflIII	ACRYGT	1 cut(s)	512
AgsI	TTSAA	7 cut(s)	104, 303, 452, 576, 715, 884, 897
AjnI	CCWGG	1 cut(s)	829
AluBI	AGCT	2 cut(s)	335, 755
AluI	AGCT	2 cut(s)	335, 755
AlwI	GGATC	1 cut(s)	258
AoxI	GGCC	3 cut(s)	148, 273, 417
ApoI	RAATTY	2 cut(s)	342, 571
ArsI	GACNNNNNNTTYG	2 cut(s)	42, 74
Asp700I	GAANNNNTTC	1 cut(s)	298
AspS9I	GGNCC	1 cut(s)	217
AsuHPI	GGTGA	3 cut(s)	155, 232, 743
AvaII	GGWCC	1 cut(s)	217
AxyI	CCTNAGG	1 cut(s)	615
BalI	TGGCCA	2 cut(s)	150, 275
BanII	GRGCYC	2 cut(s)	68, 794
BbrPI	CACGTG	1 cut(s)	515
BbsI	GAAGAC	2 cut(s)	432, 514
BccI	CCATC	8 cut(s)	134, 140, 199, 284, 464, 570, 631, 731
BciT130I	CCWGG	1 cut(s)	831
BclI	TGATCA	1 cut(s)	337
BfaI	CTAG	2 cut(s)	137, 491
Bme1390I	CCNGG	1 cut(s)	831
Bme18I	GGWCC	1 cut(s)	217
BmgT120I	GGNCC	1 cut(s)	217
BmiI	GGNNCC	4 cut(s)	65, 219, 630, 791
BmrFI	CCNGG	1 cut(s)	831
BmsI	GCATC	3 cut(s)	214, 812, 896
BpiI	GAAGAC	2 cut(s)	432, 514
BpmI	CTGGAG	1 cut(s)	132
BpuEI	CTTGAG	1 cut(s)	381
BsaAI	YACGTR	1 cut(s)	515
BsaHI	GRCGYC	1 cut(s)	519
BsaJI	CCNNGG	5 cut(s)	243, 270, 414, 420, 830
BsaXI	ACNNNNNCTCC	6 cut(s)	351, 371, 381, 401, 732, 762
Bsc4I	CCNNNNNNNGG	3 cut(s)	415, 461, 786
Bse1I	ACTGG	2 cut(s)	115, 534
Bse21I	CCTNAGG	1 cut(s)	615
BseBI	CCWGG	1 cut(s)	831
BseDI	CCNNGG	5 cut(s)	243, 270, 414, 420, 830
BseGI	GGATG	4 cut(s)	187, 194, 742, 887
BseLI	CCNNNNNNNGG	3 cut(s)	415, 461, 786
BseMII	CTCAG	1 cut(s)	448
BseNI	ACTGG	2 cut(s)	115, 534
BseRI	GAGGAG	1 cut(s)	356
BshFI	GGCC	3 cut(s)	150, 275, 419
BslI	CCNNNNNNNGG	3 cut(s)	415, 461, 786
BsnI	GGCC	3 cut(s)	150, 275, 419
Bsp1286I	GDGCHC	2 cut(s)	68, 794
Bsp143I	GATC	3 cut(s)	250, 337, 468
Bsp19I	CCATGG	2 cut(s)	270, 420
BspANI	GGCC	3 cut(s)	150, 275, 419
BspCNI	CTCAG	1 cut(s)	447
BspLI	GGNNCC	4 cut(s)	65, 219, 630, 791
BspPI	GGATC	1 cut(s)	258
BspQI	GCTCTTC	1 cut(s)	603
BsrI	ACTGG	2 cut(s)	115, 534
BssECI	CCNNGG	5 cut(s)	243, 270, 414, 420, 830
BssMI	GATC	3 cut(s)	250, 337, 468
BssNI	GRCGYC	1 cut(s)	519
BssT1I	CCWWGG	4 cut(s)	243, 270, 414, 420
Bst2UI	CCWGG	1 cut(s)	831
Bst6I	CTCTTC	1 cut(s)	603
BstACI	GRCGYC	1 cut(s)	519
BstBAI	YACGTR	1 cut(s)	515
BstC8I	GCNNGC	4 cut(s)	174, 646, 692, 815
BstDEI	CTNAG	3 cut(s)	434, 615, 818
BstDSI	CCRYGG	2 cut(s)	270, 420
BstF5I	GGATG	4 cut(s)	187, 194, 742, 887
BstKTI	GATC	3 cut(s)	253, 340, 471
BstMBI	GATC	3 cut(s)	250, 337, 468
BstNI	CCWGG	1 cut(s)	831
BstNSI	RCATGY	3 cut(s)	43, 176, 205
BstSCI	CCNGG	1 cut(s)	829
BstV2I	GAAGAC	2 cut(s)	432, 514
BstX2I	RGATCY	1 cut(s)	250
BstXI	CCANNNNNNTGG	2 cut(s)	421, 640
BstYI	RGATCY	1 cut(s)	250
Bsu36I	CCTNAGG	1 cut(s)	615
BsuRI	GGCC	3 cut(s)	150, 275, 419
BtgI	CCRYGG	2 cut(s)	270, 420
BtsCI	GGATG	4 cut(s)	187, 194, 742, 887
BtsIMutI	CAGTG	1 cut(s)	550
Cac8I	GCNNGC	4 cut(s)	174, 646, 692, 815
Cfr13I	GGNCC	1 cut(s)	217
CseI	GACGC	1 cut(s)	508
DdeI	CTNAG	3 cut(s)	434, 615, 818
DpnI	GATC	3 cut(s)	252, 339, 470
DpnII	GATC	3 cut(s)	250, 337, 468
EaeI	YGGCCR	2 cut(s)	148, 273
Eam1104I	CTCTTC	1 cut(s)	603
EarI	CTCTTC	1 cut(s)	603
Eco130I	CCWWGG	4 cut(s)	243, 270, 414, 420
Eco24I	GRGCYC	2 cut(s)	68, 794
Eco47I	GGWCC	1 cut(s)	217
Eco57I	CTGAAG	2 cut(s)	30, 207
Eco72I	CACGTG	1 cut(s)	515
Eco81I	CCTNAGG	1 cut(s)	615
EcoRII	CCWGG	1 cut(s)	829
EcoT14I	CCWWGG	4 cut(s)	243, 270, 414, 420
EcoT22I	ATGCAT	2 cut(s)	207, 805
EcoT38I	GRGCYC	2 cut(s)	68, 794
ErhI	CCWWGG	4 cut(s)	243, 270, 414, 420
FalI	AAGNNNNNCTT	2 cut(s)	283, 315
FbaI	TGATCA	1 cut(s)	337
FokI	GGATG	4 cut(s)	174, 181, 749, 874
FriOI	GRGCYC	2 cut(s)	68, 794
FspBI	CTAG	2 cut(s)	137, 491
GsuI	CTGGAG	1 cut(s)	132
HaeIII	GGCC	3 cut(s)	150, 275, 419
HgaI	GACGC	1 cut(s)	508
Hin1I	GRCGYC	1 cut(s)	519
HinfI	GANTC	3 cut(s)	401, 494, 533
HphI	GGTGA	3 cut(s)	155, 232, 743
Hpy166II	GTNNAC	1 cut(s)	703
Hpy188I	TCNGA	1 cut(s)	527
Hpy188III	TCNNGA	3 cut(s)	48, 398, 589
Hpy8I	GTNNAC	1 cut(s)	703
HpyAV	CCTTC	5 cut(s)	54, 231, 309, 386, 400
HpyCH4IV	ACGT	1 cut(s)	514
HpyCH4V	TGCA	3 cut(s)	205, 671, 803
HpyF3I	CTNAG	3 cut(s)	434, 615, 818
HpySE526I	ACGT	1 cut(s)	514
Hsp92I	GRCGYC	1 cut(s)	519
Ksp22I	TGATCA	1 cut(s)	337
Kzo9I	GATC	3 cut(s)	250, 337, 468
LguI	GCTCTTC	1 cut(s)	603
LmnI	GCTCC	3 cut(s)	63, 634, 789
LweI	GCATC	3 cut(s)	214, 812, 896
MaeI	CTAG	2 cut(s)	137, 491
MaeII	ACGT	1 cut(s)	514
MaeIII	GTNAC	2 cut(s)	318, 767
MalI	GATC	3 cut(s)	252, 339, 470
MboI	GATC	3 cut(s)	250, 337, 468
MboII	GAAGA	8 cut(s)	45, 133, 229, 341, 376, 437, 514, 620
MflI	RGATCY	1 cut(s)	250
MhlI	GDGCHC	2 cut(s)	68, 794
MlsI	TGGCCA	2 cut(s)	150, 275
MluCI	AATT	3 cut(s)	342, 571, 583
MluNI	TGGCCA	2 cut(s)	150, 275
MlyI	GAGTC	1 cut(s)	395
MnlI	CCTC	8 cut(s)	9, 107, 241, 253, 377, 383, 727, 790
Mox20I	TGGCCA	2 cut(s)	150, 275
Mph1103I	ATGCAT	2 cut(s)	207, 805
MroXI	GAANNNNTTC	1 cut(s)	298
MscI	TGGCCA	2 cut(s)	150, 275
MseI	TTAA	1 cut(s)	24
MslI	CAYNNNNRTG	2 cut(s)	177, 896
Msp20I	TGGCCA	2 cut(s)	150, 275
MspR9I	CCNGG	1 cut(s)	831
MvaI	CCWGG	1 cut(s)	831
NcoI	CCATGG	2 cut(s)	270, 420
NdeII	GATC	3 cut(s)	250, 337, 468
NlaIV	GGNNCC	4 cut(s)	65, 219, 630, 791
NmuCI	GTSAC	1 cut(s)	767
NsiI	ATGCAT	2 cut(s)	207, 805
NspI	RCATGY	3 cut(s)	43, 176, 205
PaeI	GCATGC	1 cut(s)	176
PciSI	GCTCTTC	1 cut(s)	603
PdmI	GAANNNNTTC	1 cut(s)	298
PfeI	GAWTC	2 cut(s)	494, 533
PleI	GAGTC	1 cut(s)	395
PmaCI	CACGTG	1 cut(s)	515
PmlI	CACGTG	1 cut(s)	515
PpsI	GAGTC	1 cut(s)	395
Ppu21I	YACGTR	1 cut(s)	515
Psp6I	CCWGG	1 cut(s)	829
PspCI	CACGTG	1 cut(s)	515
PspGI	CCWGG	1 cut(s)	829
PspN4I	GGNNCC	4 cut(s)	65, 219, 630, 791
PspPI	GGNCC	1 cut(s)	217
PsuI	RGATCY	1 cut(s)	250
RseI	CAYNNNNRTG	2 cut(s)	177, 896
SapI	GCTCTTC	1 cut(s)	603
SaqAI	TTAA	1 cut(s)	24
Sau3AI	GATC	3 cut(s)	250, 337, 468
Sau96I	GGNCC	1 cut(s)	217
SchI	GAGTC	1 cut(s)	395
ScrFI	CCNGG	1 cut(s)	831
SduI	GDGCHC	2 cut(s)	68, 794
SetI	ASST	8 cut(s)	245, 337, 375, 517, 711, 720, 757, 782
SfaNI	GCATC	3 cut(s)	214, 812, 896
SinI	GGWCC	1 cut(s)	217
SmiMI	CAYNNNNRTG	2 cut(s)	177, 896
SmlI	CTYRAG	1 cut(s)	396
SmoI	CTYRAG	1 cut(s)	396
SphI	GCATGC	1 cut(s)	176
Sse9I	AATT	3 cut(s)	342, 571, 583
SspMI	CTAG	2 cut(s)	137, 491
StyD4I	CCNGG	1 cut(s)	829
StyI	CCWWGG	4 cut(s)	243, 270, 414, 420
TaiI	ACGT	1 cut(s)	517
TasI	AATT	3 cut(s)	342, 571, 583
TfiI	GAWTC	2 cut(s)	494, 533
Tru1I	TTAA	1 cut(s)	24
Tru9I	TTAA	1 cut(s)	24
TscAI	CASTG	1 cut(s)	550
TseFI	GTSAC	1 cut(s)	767
Tsp45I	GTSAC	1 cut(s)	767
TspDTI	ATGAA	3 cut(s)	17, 65, 168
TspRI	CASTG	1 cut(s)	550
VpaK11BI	GGWCC	1 cut(s)	217
XapI	RAATTY	2 cut(s)	342, 571
XceI	RCATGY	3 cut(s)	43, 176, 205
XmnI	GAANNNNTTC	1 cut(s)	298
XspI	CTAG	2 cut(s)	137, 491
Zsp2I	ATGCAT	2 cut(s)	207, 805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.