pycom10g06130

BURP domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0007143
Physical Location & Seq
Forward (+)
6888851 .. 6889870
1020 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g06130.1

Sequence Viewer

Length: 885 bp
ATGAAAAGAACGGAAAGGAGTTTTAGTGAGGGAAGAAACATGGGTTCTGGACTTGCTTTCTGGACCGCCTTACTTCTGCTGCTACTGCTTGTTATGTGTGCTCAGGGAATTGAGGGCAGGAAGATGAGTGAAAAACAGTGGGAAACAACACATACGGAGCATGTTCATGCTCATCCATCATCTCACATGGATCACATGGACCCTTCACATATGATTTTCTTCACCTTGAAGGACCTAAAGCTGGGGAAAACAATGGCCATCTATTTTCCAAAAAGAAACCTTTCAAAATCTCCCCCCTTATTGCCAAGAGAAGAAGTCGATTCAATTCCCTTCTCATCAAAACAGCTCCACCACCTTCTTCAATTCTTCTCCTTCTCTCAAGACTCTCCCCAAGCCAAAGCCATGGAAGATACTCTTAGACATTGTGAAACTGCACCCATCAAAGGAGAGATCAAGTCCTGTGCTACTTCCTTAGAATCCATGCTTGATTTCGCACGCGGCGTCTTCGGATTCGACAACCGTTTCAGTGTTGTAGCCACAACCCATCTCACCAATTCAACTACTCTCTTCCAAAACTACACGATTTTGGAAGAGCCGAAGGAGATTTTCGCCACAAAGATGGTAGCTTGTCACACCTTGCCTTACCCTTACGCAGTTTTCTACTGTCACAGCCAAGAAAGCAAGAACAAGGTTTACAAAGTTTTATTGGGTGGTGAGGATGGAGATCGAGTAGATGCTGTTGCTGTTTGCCACATGGACACCTCTCAGTGGAGCCCTAATCATGCTTCATTTCATGTGCTTAAGATTAATCCAGGGTCTTCGCCTGTGTGCCATTTTTTTCCTGCTGATAATCTTGTGTGGGTTCCAACATCCACTCCAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BURP

Protein Analysis

295

Amino Acids

33.24

Weight (kDa)

6.78

Isoelectric Point (pI)

54.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BURP PF03181 72 - 289 6.4e-83 BURP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 498
AciI CCGC 2 cut(s) 66, 498
AclWI GGATC 1 cut(s) 198
AcoI YGGCCR 1 cut(s) 255
AcyI GRCGYC 1 cut(s) 501
AfiI CCNNNNNNNGG 3 cut(s) 241, 443, 768
AflII CTTAAG 1 cut(s) 800
AgsI TTSAA 5 cut(s) 229, 285, 324, 362, 558
AjnI CCWGG 1 cut(s) 811
AluBI AGCT 3 cut(s) 241, 346, 626
AluI AGCT 3 cut(s) 241, 346, 626
Alw21I GWGCWC 1 cut(s) 103
AlwI GGATC 1 cut(s) 198
AoxI GGCC 1 cut(s) 255
ApeKI GCWGC 1 cut(s) 79
AseI ATTAAT 1 cut(s) 807
Asp700I GAANNNNTTC 1 cut(s) 280
AspS9I GGNCC 3 cut(s) 63, 199, 232
AsuHPI GGTGA 3 cut(s) 214, 541, 725
AvaII GGWCC 3 cut(s) 63, 199, 232
BalI TGGCCA 1 cut(s) 257
BanII GRGCYC 1 cut(s) 776
BbsI GAAGAC 2 cut(s) 496, 810
Bbv12I GWGCWC 1 cut(s) 103
BbvI GCAGC 1 cut(s) 66
BccI CCATC 6 cut(s) 184, 266, 446, 552, 613, 713
BciT130I CCWGG 1 cut(s) 813
BfrI CTTAAG 1 cut(s) 800
BisI GCNGC 2 cut(s) 80, 499
BlsI GCNGC 2 cut(s) 81, 500
Bme1390I CCNGG 1 cut(s) 813
Bme18I GGWCC 3 cut(s) 63, 199, 232
BmgT120I GGNCC 3 cut(s) 63, 199, 232
BmiI GGNNCC 3 cut(s) 201, 773, 864
BmrFI CCNGG 1 cut(s) 813
BmsI GCATC 1 cut(s) 724
BpiI GAAGAC 2 cut(s) 496, 810
Bpu10I CCTNAGC 1 cut(s) 102
BpuEI CTTGAG 1 cut(s) 363
BsaBI GATNNNNATC 1 cut(s) 723
BsaHI GRCGYC 1 cut(s) 501
BsaJI CCNNGG 2 cut(s) 402, 812
BsaXI ACNNNNNCTCC 5 cut(s) 10, 40, 714, 744, 859
Bsc4I CCNNNNNNNGG 3 cut(s) 241, 443, 768
Bse8I GATNNNNATC 1 cut(s) 723
BseBI CCWGG 1 cut(s) 813
BseDI CCNNGG 2 cut(s) 402, 812
BseGI GGATG 3 cut(s) 172, 724, 869
BseJI GATNNNNATC 1 cut(s) 723
BseLI CCNNNNNNNGG 3 cut(s) 241, 443, 768
BseMII CTCAG 2 cut(s) 116, 779
BseXI GCAGC 1 cut(s) 66
BseYI CCCAGC 1 cut(s) 241
BsgI GTGCAG 1 cut(s) 417
Bsh1236I CGCG 1 cut(s) 498
BshFI GGCC 1 cut(s) 257
BsiHKAI GWGCWC 1 cut(s) 103
BslI CCNNNNNNNGG 3 cut(s) 241, 443, 768
BsnI GGCC 1 cut(s) 257
Bsp1286I GDGCHC 2 cut(s) 103, 776
Bsp143I GATC 3 cut(s) 190, 450, 724
Bsp19I CCATGG 1 cut(s) 402
BspACI CCGC 2 cut(s) 66, 498
BspANI GGCC 1 cut(s) 257
BspCNI CTCAG 2 cut(s) 115, 778
BspFNI CGCG 1 cut(s) 498
BspLI GGNNCC 3 cut(s) 201, 773, 864
BspPI GGATC 1 cut(s) 198
BspQI GCTCTTC 1 cut(s) 585
BspTI CTTAAG 1 cut(s) 800
BssECI CCNNGG 2 cut(s) 402, 812
BssMI GATC 3 cut(s) 190, 450, 724
BssNI GRCGYC 1 cut(s) 501
BssT1I CCWWGG 1 cut(s) 402
Bst2UI CCWGG 1 cut(s) 813
Bst4CI ACNGT 3 cut(s) 138, 521, 665
Bst6I CTCTTC 2 cut(s) 572, 585
BstACI GRCGYC 1 cut(s) 501
BstAFI CTTAAG 1 cut(s) 800
BstC8I GCNNGC 1 cut(s) 496
BstDEI CTNAG 4 cut(s) 102, 416, 472, 765
BstDSI CCRYGG 1 cut(s) 402
BstF5I GGATG 3 cut(s) 172, 724, 869
BstFNI CGCG 1 cut(s) 498
BstKTI GATC 3 cut(s) 193, 453, 727
BstMBI GATC 3 cut(s) 190, 450, 724
BstMWI GCNNNNNNNGC 2 cut(s) 85, 678
BstNI CCWGG 1 cut(s) 813
BstNSI RCATGY 1 cut(s) 164
BstSCI CCNGG 1 cut(s) 811
BstUI CGCG 1 cut(s) 498
BstV1I GCAGC 1 cut(s) 66
BstV2I GAAGAC 2 cut(s) 496, 810
BstXI CCANNNNNNTGG 2 cut(s) 403, 619
BsuRI GGCC 1 cut(s) 257
BtgI CCRYGG 1 cut(s) 402
BtsCI GGATG 3 cut(s) 172, 724, 869
BtsIMutI CAGTG 3 cut(s) 143, 532, 773
Cac8I GCNNGC 1 cut(s) 496
Cfr13I GGNCC 3 cut(s) 63, 199, 232
CseI GACGC 1 cut(s) 490
DdeI CTNAG 4 cut(s) 102, 416, 472, 765
DpnI GATC 3 cut(s) 192, 452, 726
DpnII GATC 3 cut(s) 190, 450, 724
EaeI YGGCCR 1 cut(s) 255
Eam1104I CTCTTC 2 cut(s) 572, 585
EarI CTCTTC 2 cut(s) 572, 585
Eco130I CCWWGG 1 cut(s) 402
Eco24I GRGCYC 1 cut(s) 776
Eco47I GGWCC 3 cut(s) 63, 199, 232
EcoO109I RGGNCCY 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 811
EcoT14I CCWWGG 1 cut(s) 402
EcoT38I GRGCYC 1 cut(s) 776
ErhI CCWWGG 1 cut(s) 402
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FauNDI CATATG 1 cut(s) 210
Fnu4HI GCNGC 2 cut(s) 80, 499
FokI GGATG 3 cut(s) 159, 731, 856
FriOI GRGCYC 1 cut(s) 776
Fsp4HI GCNGC 2 cut(s) 80, 499
GluI GCNGC 2 cut(s) 80, 499
GsaI CCCAGC 1 cut(s) 245
HaeIII GGCC 1 cut(s) 257
HgaI GACGC 1 cut(s) 490
Hin1I GRCGYC 1 cut(s) 501
HinfI GANTC 4 cut(s) 320, 383, 476, 510
HphI GGTGA 3 cut(s) 214, 541, 725
Hpy166II GTNNAC 1 cut(s) 694
Hpy188I TCNGA 1 cut(s) 509
Hpy188III TCNNGA 3 cut(s) 48, 61, 380
Hpy8I GTNNAC 1 cut(s) 694
HpyAV CCTTC 6 cut(s) 213, 223, 340, 365, 382, 592
HpyCH4III ACNGT 3 cut(s) 138, 521, 665
HpyCH4V TGCA 1 cut(s) 434
HpyF10VI GCNNNNNNNGC 2 cut(s) 85, 678
HpyF3I CTNAG 4 cut(s) 102, 416, 472, 765
Hsp92I GRCGYC 1 cut(s) 501
Kzo9I GATC 3 cut(s) 190, 450, 724
LguI GCTCTTC 1 cut(s) 585
LmnI GCTCC 3 cut(s) 157, 351, 771
Lsp1109I GCAGC 1 cut(s) 66
LweI GCATC 1 cut(s) 724
MaeIII GTNAC 2 cut(s) 629, 665
MalI GATC 3 cut(s) 192, 452, 726
MboI GATC 3 cut(s) 190, 450, 724
MhlI GDGCHC 2 cut(s) 103, 776
MlsI TGGCCA 1 cut(s) 257
MluCI AATT 4 cut(s) 108, 324, 362, 553
MluNI TGGCCA 1 cut(s) 257
MlyI GAGTC 1 cut(s) 377
MnlI CCTC 4 cut(s) 22, 106, 709, 772
Mox20I TGGCCA 1 cut(s) 257
MroXI GAANNNNTTC 1 cut(s) 280
MscI TGGCCA 1 cut(s) 257
MseI TTAA 2 cut(s) 801, 807
MslI CAYNNNNRTG 3 cut(s) 165, 617, 878
Msp20I TGGCCA 1 cut(s) 257
MspCI CTTAAG 1 cut(s) 800
MspR9I CCNGG 1 cut(s) 813
MvaI CCWGG 1 cut(s) 813
MvnI CGCG 1 cut(s) 498
MwoI GCNNNNNNNGC 2 cut(s) 85, 678
NcoI CCATGG 1 cut(s) 402
NdeI CATATG 1 cut(s) 210
NdeII GATC 3 cut(s) 190, 450, 724
NlaIV GGNNCC 3 cut(s) 201, 773, 864
NmuCI GTSAC 2 cut(s) 629, 665
NspI RCATGY 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 585
PcsI WCGNNNNNNNCGW 1 cut(s) 498
PdmI GAANNNNTTC 1 cut(s) 280
PfeI GAWTC 3 cut(s) 320, 476, 510
PkrI GCNGC 2 cut(s) 81, 500
PleI GAGTC 1 cut(s) 377
PpsI GAGTC 1 cut(s) 377
PpuMI RGGWCCY 1 cut(s) 232
PshBI ATTAAT 1 cut(s) 807
Psp5II RGGWCCY 1 cut(s) 232
Psp6I CCWGG 1 cut(s) 811
PspFI CCCAGC 1 cut(s) 241
PspGI CCWGG 1 cut(s) 811
PspN4I GGNNCC 3 cut(s) 201, 773, 864
PspPI GGNCC 3 cut(s) 63, 199, 232
PspPPI RGGWCCY 1 cut(s) 232
PsrI GAACNNNNNNTAC 2 cut(s) 677, 709
RseI CAYNNNNRTG 3 cut(s) 165, 617, 878
SapI GCTCTTC 1 cut(s) 585
SaqAI TTAA 2 cut(s) 801, 807
SatI GCNGC 2 cut(s) 80, 499
Sau3AI GATC 3 cut(s) 190, 450, 724
Sau96I GGNCC 3 cut(s) 63, 199, 232
SchI GAGTC 1 cut(s) 377
ScrFI CCNGG 1 cut(s) 813
SduI GDGCHC 2 cut(s) 103, 776
SfaNI GCATC 1 cut(s) 724
SinI GGWCC 3 cut(s) 63, 199, 232
SmiMI CAYNNNNRTG 3 cut(s) 165, 617, 878
SmlI CTYRAG 2 cut(s) 378, 800
SmoI CTYRAG 2 cut(s) 378, 800
Sse9I AATT 4 cut(s) 108, 324, 362, 553
SsiI CCGC 2 cut(s) 66, 498
StyD4I CCNGG 1 cut(s) 811
StyI CCWWGG 1 cut(s) 402
TaaI ACNGT 3 cut(s) 138, 521, 665
TaqI TCGA 3 cut(s) 318, 513, 727
TasI AATT 4 cut(s) 108, 324, 362, 553
TauI GCSGC 1 cut(s) 501
TfiI GAWTC 3 cut(s) 320, 476, 510
Tru1I TTAA 2 cut(s) 801, 807
Tru9I TTAA 2 cut(s) 801, 807
TscAI CASTG 3 cut(s) 143, 532, 773
TseFI GTSAC 2 cut(s) 629, 665
TseI GCWGC 1 cut(s) 79
Tsp45I GTSAC 2 cut(s) 629, 665
TspDTI ATGAA 4 cut(s) 17, 155, 777, 782
TspGWI ACGGA 2 cut(s) 26, 170
TspRI CASTG 3 cut(s) 143, 532, 773
Vha464I CTTAAG 1 cut(s) 800
VpaK11BI GGWCC 3 cut(s) 63, 199, 232
VspI ATTAAT 1 cut(s) 807
XceI RCATGY 1 cut(s) 164
XmnI GAANNNNTTC 1 cut(s) 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.