Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003107

Physical Location & Seq

Genomic Coordinates Forward (+)

14803249 .. 14805542

Gene Structure 2294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G122300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 606 bp

ATGGGGGACTGTAACTGTAAGCGAATGGCGGCCATGGACGACTCAGCCACAGGCGTGTCGAAGAGGAGAAAATTCAGAGCTTCTTCATCTCCGCACAAGCAACGCTTCTCACACTCAGAGGCGCCATTGCCGCCAAGTCCACCAATGCTTCATCTCCGTCACTCTCATTCTCCTCAGCTCCTGAATTCCTCCGATTCTTGCTCGAACTTTTGCTCTGATCACTCTCCTCCTTCCTCTTGCTGCTCCAGCAATGAGCTCAACGACGTCGTCGTCGCCCACAGCTCGCCGCTCCTAGATCTGGAGGCCAAGAGTTTCGAAACCGTCCACTCCAACTCTCCTTCGGCCAACAATAAATTCAGCAGAGAAACGACGCCGTCCAGCGAGCTGTGCCTAGGCTCCGAGGAAATGGAATCGCCTGCGCCGGCGGTGTATCTCCGACGGAGACAACTCCCGGTGAGCAAAGCTCCTCCGAGTGATGAGATCGAAGAGTTCTTCGCCATGGCCGAGAAGTACGAGCAAAAGCGCTTTGCAGAGAAGTACAACTATGACATCGTCAAGGATATGCCTTTGGAGGGCCGTTACCAGTGGGTTCGTTTGAAGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0001673 GO:0001932 GO:0001933 GO:0003674 GO:0004857 GO:0004860 GO:0004861 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006469 GO:0008150 GO:0009892 GO:0010563 GO:0010605 GO:0016538 GO:0019207 GO:0019210 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0030291 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0033673 GO:0042325 GO:0042326 GO:0043073 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044092 GO:0044424 GO:0044464 GO:0045736 GO:0045786 GO:0045859 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051348 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071900 GO:0071901 GO:0080090 GO:0098772 GO:1904029 GO:1904030

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDI

Protein Analysis

202

Amino Acids

22.55

Weight (kDa)

6.7

Isoelectric Point (pI)

87.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49620 AT1G49620 AT1G49620 AT3G19150 AT3G19150 AT3G19150
fragaria_vesca	FvH4_2g06360 FvH4_2g06360 FvH4_2g06360 FvH4_2g06360 FvH4_2g06360 FvH4_2g06360 FvH4_2g06360 FvH4_2g06360
malus_domestica	MD05G1077300.v1.1 MD10G1092500.v1.1
prunus_persica	Prupe.8G122300_v2.0.a1 Prupe.8G122300_v2.0.a1
pyrus_communis	pycom05g07110 pycom10g07590
rosa_chinensis	RchiOBHm_Chr6g0258231
rosa_laevigata	RLG00000000982 RLG00000001994 RLG00000014637 RLG00000024163 RLG00000027108 RLG00000035728
rosa_multiflora	Rmu_sc0004230.1_g000011
rosa_roxburghii	Rroxscaffold_178G00437200 Rroxscaffold_7G00205360
rosa_rugosa	Rorug05G0347300 Rorug05G0579500
rosa_samantha	Rh1BG242200 Rh6AG097500 Rh6BG088500
rosa_wichuraiana	Rw6G008260 Rw6G008340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	269
AatII	GACGTC	1 cut(s)	267
AccB1I	GGYRCC	1 cut(s)	121
AccBSI	CCGCTC	1 cut(s)	289
AciI	CCGC	5 cut(s)	29, 92, 131, 287, 425
AcoI	YGGCCR	3 cut(s)	30, 342, 501
AcsI	RAATTY	3 cut(s)	71, 184, 353
AcyI	GRCGYC	3 cut(s)	122, 264, 371
AfaI	GTAC	2 cut(s)	512, 539
AfeI	AGCGCT	1 cut(s)	524
AfiI	CCNNNNNNNGG	2 cut(s)	298, 572
AgsI	TTSAA	1 cut(s)	598
AjuI	GAANNNNNNNTTGG	2 cut(s)	338, 370
AleI	CACNNNNGTG	1 cut(s)	53
AluBI	AGCT	6 cut(s)	80, 178, 256, 282, 385, 464
AluI	AGCT	6 cut(s)	80, 178, 256, 282, 385, 464
Alw21I	GWGCWC	1 cut(s)	258
Alw26I	GTCTC	1 cut(s)	436
AlwNI	CAGNNNCTG	1 cut(s)	181
Aor51HI	AGCGCT	1 cut(s)	524
AoxI	GGCC	5 cut(s)	30, 303, 342, 501, 574
ApeKI	GCWGC	1 cut(s)	240
ApoI	RAATTY	3 cut(s)	71, 184, 353
AspA2I	CCTAGG	1 cut(s)	391
AspLEI	GCGC	3 cut(s)	124, 421, 525
AspS9I	GGNCC	1 cut(s)	574
AsuC2I	CCSGG	1 cut(s)	452
AsuHPI	GGTGA	1 cut(s)	466
AsuII	TTCGAA	1 cut(s)	315
AvrII	CCTAGG	1 cut(s)	391
BanI	GGYRCC	1 cut(s)	121
BanII	GRGCYC	1 cut(s)	258
Bbv12I	GWGCWC	1 cut(s)	258
BbvCI	CCTCAGC	1 cut(s)	174
BbvI	GCAGC	1 cut(s)	227
BceAI	ACGGC	2 cut(s)	358, 561
BclI	TGATCA	1 cut(s)	217
BcnI	CCSGG	1 cut(s)	452
BcoDI	GTCTC	1 cut(s)	436
BfaI	CTAG	2 cut(s)	293, 392
BfoI	RGCGCY	2 cut(s)	125, 526
BglII	AGATCT	1 cut(s)	295
BisI	GCNGC	4 cut(s)	30, 131, 241, 287
BlnI	CCTAGG	1 cut(s)	391
BlsI	GCNGC	4 cut(s)	31, 132, 242, 288
Bme1390I	CCNGG	1 cut(s)	452
BmgT120I	GGNCC	1 cut(s)	574
BmiI	GGNNCC	2 cut(s)	123, 397
BmrFI	CCNGG	1 cut(s)	452
BplI	GAGNNNNNCTC	2 cut(s)	448, 480
BpmI	CTGGAG	2 cut(s)	229, 320
Bpu10I	CCTNAGC	1 cut(s)	174
Bpu14I	TTCGAA	1 cut(s)	315
BpuMI	CCSGG	1 cut(s)	452
BsaHI	GRCGYC	3 cut(s)	122, 264, 371
BsaJI	CCNNGG	4 cut(s)	33, 391, 399, 498
Bsc4I	CCNNNNNNNGG	2 cut(s)	298, 572
Bse118I	RCCGGY	1 cut(s)	421
Bse1I	ACTGG	1 cut(s)	583
Bse3DI	GCAATG	2 cut(s)	125, 256
BseDI	CCNNGG	4 cut(s)	33, 391, 399, 498
BseLI	CCNNNNNNNGG	2 cut(s)	298, 572
BseMI	GCAATG	2 cut(s)	125, 256
BseMII	CTCAG	3 cut(s)	57, 129, 188
BseNI	ACTGG	1 cut(s)	583
BseRI	GAGGAG	4 cut(s)	79, 162, 216, 456
BseXI	GCAGC	1 cut(s)	227
BshFI	GGCC	5 cut(s)	32, 305, 344, 503, 576
BshNI	GGYRCC	1 cut(s)	121
BsiHKAI	GWGCWC	1 cut(s)	258
BsiSI	CCGG	2 cut(s)	422, 452
BslFI	GGGAC	1 cut(s)	20
BslI	CCNNNNNNNGG	2 cut(s)	298, 572
BsmAI	GTCTC	1 cut(s)	436
BsmFI	GGGAC	1 cut(s)	20
BsnI	GGCC	5 cut(s)	32, 305, 344, 503, 576
Bsp119I	TTCGAA	1 cut(s)	315
Bsp1286I	GDGCHC	1 cut(s)	258
Bsp143I	GATC	3 cut(s)	217, 295, 480
Bsp19I	CCATGG	2 cut(s)	33, 498
BspACI	CCGC	5 cut(s)	29, 92, 131, 287, 425
BspANI	GGCC	5 cut(s)	32, 305, 344, 503, 576
BspCNI	CTCAG	3 cut(s)	56, 128, 187
BspLI	GGNNCC	2 cut(s)	123, 397
BspT104I	TTCGAA	1 cut(s)	315
BspT107I	GGYRCC	1 cut(s)	121
BsrBI	CCGCTC	1 cut(s)	289
BsrDI	GCAATG	2 cut(s)	125, 256
BsrFI	RCCGGY	1 cut(s)	421
BsrI	ACTGG	1 cut(s)	583
BssAI	RCCGGY	1 cut(s)	421
BssECI	CCNNGG	4 cut(s)	33, 391, 399, 498
BssMI	GATC	3 cut(s)	217, 295, 480
BssNI	GRCGYC	3 cut(s)	122, 264, 371
BssT1I	CCWWGG	3 cut(s)	33, 391, 498
Bst4CI	ACNGT	3 cut(s)	11, 17, 322
Bst6I	CTCTTC	2 cut(s)	56, 480
BstACI	GRCGYC	3 cut(s)	122, 264, 371
BstBI	TTCGAA	1 cut(s)	315
BstC8I	GCNNGC	4 cut(s)	284, 383, 417, 423
BstDEI	CTNAG	3 cut(s)	43, 115, 174
BstDSI	CCRYGG	2 cut(s)	33, 498
BstH2I	RGCGCY	2 cut(s)	125, 526
BstHHI	GCGC	3 cut(s)	124, 421, 525
BstKTI	GATC	3 cut(s)	220, 298, 483
BstMAI	GTCTC	1 cut(s)	436
BstMBI	GATC	3 cut(s)	217, 295, 480
BstMWI	GCNNNNNNNGC	3 cut(s)	130, 246, 387
BstSCI	CCNGG	1 cut(s)	450
BstV1I	GCAGC	1 cut(s)	227
BstX2I	RGATCY	1 cut(s)	295
BstYI	RGATCY	1 cut(s)	295
BsuRI	GGCC	5 cut(s)	32, 305, 344, 503, 576
BtgI	CCRYGG	2 cut(s)	33, 498
BtsIMutI	CAGTG	1 cut(s)	590
Cac8I	GCNNGC	4 cut(s)	284, 383, 417, 423
CaiI	CAGNNNCTG	1 cut(s)	181
CfoI	GCGC	3 cut(s)	124, 421, 525
Cfr10I	RCCGGY	1 cut(s)	421
Cfr13I	GGNCC	1 cut(s)	574
CseI	GACGC	1 cut(s)	379
Csp6I	GTAC	2 cut(s)	511, 538
CviAII	CATG	2 cut(s)	34, 499
CviQI	GTAC	2 cut(s)	511, 538
DdeI	CTNAG	3 cut(s)	43, 115, 174
DinI	GGCGCC	1 cut(s)	123
DpnI	GATC	3 cut(s)	219, 297, 482
DpnII	GATC	3 cut(s)	217, 295, 480
DrdI	GACNNNNNNGTC	1 cut(s)	269
DseDI	GACNNNNNNGTC	1 cut(s)	269
EaeI	YGGCCR	3 cut(s)	30, 342, 501
Eam1104I	CTCTTC	2 cut(s)	56, 480
EarI	CTCTTC	2 cut(s)	56, 480
Ecl136II	GAGCTC	1 cut(s)	256
Eco130I	CCWWGG	3 cut(s)	33, 391, 498
Eco24I	GRGCYC	1 cut(s)	258
Eco47III	AGCGCT	1 cut(s)	524
Eco53kI	GAGCTC	1 cut(s)	256
EcoICRI	GAGCTC	1 cut(s)	256
EcoRI	GAATTC	1 cut(s)	184
EcoT14I	CCWWGG	3 cut(s)	33, 391, 498
EcoT38I	GRGCYC	1 cut(s)	258
EgeI	GGCGCC	1 cut(s)	123
EheI	GGCGCC	1 cut(s)	123
ErhI	CCWWGG	3 cut(s)	33, 391, 498
FaeI	CATG	2 cut(s)	37, 502
FaiI	YATR	5 cut(s)	35, 500, 546, 563, 604
FalI	AAGNNNNNCTT	2 cut(s)	89, 121
FaqI	GGGAC	1 cut(s)	20
FatI	CATG	2 cut(s)	33, 498
FbaI	TGATCA	1 cut(s)	217
Fnu4HI	GCNGC	4 cut(s)	30, 131, 241, 287
FriOI	GRGCYC	1 cut(s)	258
Fsp4HI	GCNGC	4 cut(s)	30, 131, 241, 287
FspBI	CTAG	2 cut(s)	293, 392
GlaI	GCGC	3 cut(s)	123, 420, 524
GluI	GCNGC	4 cut(s)	30, 131, 241, 287
GsuI	CTGGAG	2 cut(s)	229, 320
HaeII	RGCGCY	2 cut(s)	125, 526
HaeIII	GGCC	5 cut(s)	32, 305, 344, 503, 576
HapII	CCGG	2 cut(s)	422, 452
HgaI	GACGC	1 cut(s)	379
HhaI	GCGC	3 cut(s)	124, 421, 525
Hin1I	GRCGYC	3 cut(s)	122, 264, 371
Hin1II	CATG	2 cut(s)	37, 502
Hin6I	GCGC	3 cut(s)	122, 419, 523
HinP1I	GCGC	3 cut(s)	122, 419, 523
HinfI	GANTC	3 cut(s)	41, 194, 410
HpaII	CCGG	2 cut(s)	422, 452
HphI	GGTGA	1 cut(s)	466
Hpy166II	GTNNAC	2 cut(s)	140, 325
Hpy188I	TCNGA	7 cut(s)	77, 118, 193, 217, 400, 437, 471
Hpy188III	TCNNGA	2 cut(s)	181, 299
Hpy8I	GTNNAC	2 cut(s)	140, 325
Hpy99I	CGWCG	6 cut(s)	266, 269, 272, 275, 373, 441
HpyAV	CCTTC	2 cut(s)	240, 348
HpyCH4III	ACNGT	3 cut(s)	11, 17, 322
HpyCH4IV	ACGT	1 cut(s)	264
HpyCH4V	TGCA	1 cut(s)	530
HpyF10VI	GCNNNNNNNGC	3 cut(s)	130, 246, 387
HpyF3I	CTNAG	3 cut(s)	43, 115, 174
HpySE526I	ACGT	1 cut(s)	264
Hsp92I	GRCGYC	3 cut(s)	122, 264, 371
Hsp92II	CATG	2 cut(s)	37, 502
HspAI	GCGC	3 cut(s)	122, 419, 523
KasI	GGCGCC	1 cut(s)	121
KroI	GCCGGC	1 cut(s)	421
KroNI	GCCGGC	1 cut(s)	423
Ksp22I	TGATCA	1 cut(s)	217
Kzo9I	GATC	3 cut(s)	217, 295, 480
LmnI	GCTCC	5 cut(s)	183, 248, 294, 401, 469
LpnPI	CCDG	9 cut(s)	36, 194, 259, 284, 391, 429, 435, 465, 596
Lsp1109I	GCAGC	1 cut(s)	227
MaeI	CTAG	2 cut(s)	293, 392
MaeII	ACGT	1 cut(s)	264
MaeIII	GTNAC	3 cut(s)	11, 158, 578
MalI	GATC	3 cut(s)	219, 297, 482
MbiI	CCGCTC	1 cut(s)	289
MboI	GATC	3 cut(s)	217, 295, 480
MboII	GAAGA	4 cut(s)	73, 75, 484, 497
MflI	RGATCY	1 cut(s)	295
MhlI	GDGCHC	1 cut(s)	258
MluCI	AATT	3 cut(s)	71, 184, 353
Mly113I	GGCGCC	1 cut(s)	122
MlyI	GAGTC	1 cut(s)	35
MmeI	TCCRAC	2 cut(s)	354, 460
MreI	CGCCGGCG	1 cut(s)	421
MroNI	GCCGGC	1 cut(s)	421
MslI	CAYNNNNRTG	1 cut(s)	53
MspI	CCGG	2 cut(s)	422, 452
MspR9I	CCNGG	1 cut(s)	452
MwoI	GCNNNNNNNGC	3 cut(s)	130, 246, 387
NaeI	GCCGGC	1 cut(s)	423
NarI	GGCGCC	1 cut(s)	122
NciI	CCSGG	1 cut(s)	452
NcoI	CCATGG	2 cut(s)	33, 498
NdeII	GATC	3 cut(s)	217, 295, 480
NgoMIV	GCCGGC	1 cut(s)	421
NlaIII	CATG	2 cut(s)	37, 502
NlaIV	GGNNCC	2 cut(s)	123, 397
NmeAIII	GCCGAG	1 cut(s)	529
NmuCI	GTSAC	1 cut(s)	158
NspV	TTCGAA	1 cut(s)	315
OliI	CACNNNNGTG	1 cut(s)	53
PcsI	WCGNNNNNNNCGW	2 cut(s)	267, 501
PdiI	GCCGGC	1 cut(s)	423
PfeI	GAWTC	2 cut(s)	194, 410
PflFI	GACNNNGTC	3 cut(s)	266, 373, 551
PkrI	GCNGC	4 cut(s)	31, 132, 242, 288
PleI	GAGTC	1 cut(s)	35
PluTI	GGCGCC	1 cut(s)	125
PpsI	GAGTC	1 cut(s)	35
Psp124BI	GAGCTC	1 cut(s)	258
PspN4I	GGNNCC	2 cut(s)	123, 397
PspPI	GGNCC	1 cut(s)	574
PstNI	CAGNNNCTG	1 cut(s)	181
PsuI	RGATCY	1 cut(s)	295
PsyI	GACNNNGTC	3 cut(s)	266, 373, 551
RsaI	GTAC	2 cut(s)	512, 539
RsaNI	GTAC	2 cut(s)	511, 538
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	258
SatI	GCNGC	4 cut(s)	30, 131, 241, 287
Sau3AI	GATC	3 cut(s)	217, 295, 480
Sau96I	GGNCC	1 cut(s)	574
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	1 cut(s)	452
SduI	GDGCHC	1 cut(s)	258
SetI	ASST	7 cut(s)	82, 180, 258, 267, 284, 387, 466
SfoI	GGCGCC	1 cut(s)	123
SfuI	TTCGAA	1 cut(s)	315
SgrAI	CRCCGGYG	1 cut(s)	421
SmiMI	CAYNNNNRTG	1 cut(s)	53
Sse9I	AATT	3 cut(s)	71, 184, 353
SsiI	CCGC	5 cut(s)	29, 92, 131, 287, 425
SspDI	GGCGCC	1 cut(s)	121
SspMI	CTAG	2 cut(s)	293, 392
SstI	GAGCTC	1 cut(s)	258
StyD4I	CCNGG	1 cut(s)	450
StyI	CCWWGG	3 cut(s)	33, 391, 498
TaaI	ACNGT	3 cut(s)	11, 17, 322
TaiI	ACGT	1 cut(s)	267
TaqI	TCGA	4 cut(s)	59, 203, 315, 483
TasI	AATT	3 cut(s)	71, 184, 353
TatI	WGTACW	1 cut(s)	537
TauI	GCSGC	3 cut(s)	32, 133, 289
TfiI	GAWTC	2 cut(s)	194, 410
TscAI	CASTG	1 cut(s)	590
TseFI	GTSAC	1 cut(s)	158
TseI	GCWGC	1 cut(s)	240
Tsp45I	GTSAC	1 cut(s)	158
TspDTI	ATGAA	2 cut(s)	75, 140
TspGWI	ACGGA	2 cut(s)	146, 454
TspRI	CASTG	1 cut(s)	590
Tth111I	GACNNNGTC	3 cut(s)	266, 373, 551
XapI	RAATTY	3 cut(s)	71, 184, 353
XmaJI	CCTAGG	1 cut(s)	391
XspI	CTAG	2 cut(s)	293, 392
ZraI	GACGTC	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.