E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34100 AT4G34100 |
| fragaria_vesca | FvH4_2g05730 FvH4_2g05730 |
| malus_domestica | MD00G1138200.v1.1 MD05G1085000.v1.1 |
| prunus_persica | Prupe.8G129300_v2.0.a1 |
| pyrus_communis | pycom05g08410 pycom10g07980 |
| rosa_chinensis | RchiOBHm_Chr6g0256621 |
| rosa_laevigata | RLG00000014749 |
| rosa_multiflora | Rmu_sc0003012.1_g000002 Rmu_sc0024605.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00209160 |
| rosa_rugosa | Rorug05G0564900 Rorug05G0564900 Rorug05G0565000 |
| rosa_samantha | Rh6AG082900 Rh6BG077500 Rh6CG072100 Rh6DG069300 |
| rosa_wichuraiana | Rw6G007480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 41, 85, 2309 |
| AatII | GACGTC | 2 cut(s) | 45, 128 |
| Acc36I | ACCTGC | 1 cut(s) | 809 |
| Acc65I | GGTACC | 1 cut(s) | 225 |
| AccB1I | GGYRCC | 3 cut(s) | 225, 1960, 3066 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2248, 2267 |
| AccBSI | CCGCTC | 1 cut(s) | 220 |
| AccI | GTMKAC | 1 cut(s) | 1734 |
| AccII | CGCG | 4 cut(s) | 59, 113, 2739, 2931 |
| AclI | AACGTT | 1 cut(s) | 849 |
| AclWI | GGATC | 7 cut(s) | 194, 1805, 1814, 1850, 1991, 2267, 2841 |
| AcoI | YGGCCR | 1 cut(s) | 1014 |
| AcsI | RAATTY | 2 cut(s) | 760, 2010 |
| AcuI | CTGAAG | 2 cut(s) | 263, 1504 |
| AcyI | GRCGYC | 5 cut(s) | 42, 54, 69, 125, 207 |
| AfaI | GTAC | 9 cut(s) | 227, 945, 1445, 1636, 2235, 2379, 2439, 2519, 2988 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 36, 313, 1162, 2248, 2267, 3014 |
| AflIII | ACRYGT | 3 cut(s) | 177, 1389, 1737 |
| AgeI | ACCGGT | 1 cut(s) | 3150 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 58 |
| AjiI | CACGTC | 1 cut(s) | 178 |
| AjnI | CCWGG | 6 cut(s) | 264, 742, 1091, 2197, 2241, 2260 |
| Alw21I | GWGCWC | 6 cut(s) | 264, 535, 724, 742, 960, 1866 |
| Alw26I | GTCTC | 3 cut(s) | 278, 532, 1496 |
| Alw44I | GTGCAC | 2 cut(s) | 260, 1862 |
| AlwI | GGATC | 7 cut(s) | 194, 1805, 1814, 1850, 1991, 2267, 2841 |
| Ama87I | CYCGRG | 1 cut(s) | 199 |
| AoxI | GGCC | 4 cut(s) | 15, 1014, 2617, 3252 |
| ApaLI | GTGCAC | 2 cut(s) | 260, 1862 |
| ApeKI | GCWGC | 9 cut(s) | 728, 791, 854, 875, 1525, 1535, 2171, 2704, 2908 |
| ApoI | RAATTY | 2 cut(s) | 760, 2010 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 115, 147, 3230, 3262 |
| AsiGI | ACCGGT | 1 cut(s) | 3150 |
| Asp718I | GGTACC | 1 cut(s) | 225 |
| AspLEI | GCGC | 3 cut(s) | 236, 441, 2739 |
| AspS9I | GGNCC | 7 cut(s) | 16, 974, 1115, 1711, 1882, 2239, 2617 |
| AsuC2I | CCSGG | 4 cut(s) | 14, 38, 200, 201 |
| AsuHPI | GGTGA | 7 cut(s) | 157, 782, 1299, 1466, 2282, 2734, 3112 |
| AsuNHI | GCTAGC | 1 cut(s) | 608 |
| AvaI | CYCGRG | 1 cut(s) | 199 |
| AvaII | GGWCC | 5 cut(s) | 974, 1115, 1711, 1882, 2239 |
| AxyI | CCTNAGG | 1 cut(s) | 2160 |
| BaeGI | GKGCMC | 4 cut(s) | 264, 802, 1866, 2128 |
| BalI | TGGCCA | 1 cut(s) | 1016 |
| BanI | GGYRCC | 3 cut(s) | 225, 1960, 3066 |
| BanII | GRGCYC | 3 cut(s) | 535, 742, 960 |
| BauI | CACGAG | 1 cut(s) | 723 |
| BbsI | GAAGAC | 3 cut(s) | 123, 1757, 2209 |
| Bbv12I | GWGCWC | 6 cut(s) | 264, 535, 724, 742, 960, 1866 |
| BbvI | GCAGC | 9 cut(s) | 715, 778, 841, 887, 1537, 1547, 2183, 2691, 2895 |
| BceAI | ACGGC | 2 cut(s) | 56, 2127 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 860, 894, 2722, 2756 |
| BciT130I | CCWGG | 6 cut(s) | 266, 744, 1093, 2199, 2243, 2262 |
| BciVI | GTATCC | 1 cut(s) | 1379 |
| BcnI | CCSGG | 4 cut(s) | 14, 38, 200, 201 |
| BcoDI | GTCTC | 3 cut(s) | 278, 532, 1496 |
| BfaI | CTAG | 8 cut(s) | 609, 1110, 1406, 1449, 1580, 1625, 2817, 2904 |
| BfmI | CTRYAG | 4 cut(s) | 190, 564, 2216, 2556 |
| BfuAI | ACCTGC | 1 cut(s) | 809 |
| BfuI | GTATCC | 1 cut(s) | 1379 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 62 |
| BglII | AGATCT | 2 cut(s) | 1254, 2622 |
| Bme18I | GGWCC | 5 cut(s) | 974, 1115, 1711, 1882, 2239 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 58 |
| BmeT110I | CYCGRG | 1 cut(s) | 199 |
| BmgBI | CACGTC | 1 cut(s) | 178 |
| BmgT120I | GGNCC | 7 cut(s) | 16, 974, 1115, 1711, 1882, 2239, 2617 |
| BmrI | ACTGGG | 3 cut(s) | 1601, 2753, 2791 |
| BmtI | GCTAGC | 1 cut(s) | 612 |
| BmuI | ACTGGG | 3 cut(s) | 1601, 2753, 2791 |
| BpiI | GAAGAC | 3 cut(s) | 123, 1757, 2209 |
| BpmI | CTGGAG | 2 cut(s) | 834, 2583 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2175 |
| BpuEI | CTTGAG | 1 cut(s) | 2789 |
| BpuMI | CCSGG | 4 cut(s) | 14, 38, 200, 201 |
| BsaAI | YACGTR | 1 cut(s) | 668 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2681 |
| BsaHI | GRCGYC | 5 cut(s) | 42, 54, 69, 125, 207 |
| BsaJI | CCNNGG | 5 cut(s) | 12, 199, 1033, 1161, 1420 |
| BsaWI | WCCGGW | 2 cut(s) | 222, 3150 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 164, 194, 511, 541 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 36, 313, 1162, 2248, 2267, 3014 |
| Bse118I | RCCGGY | 1 cut(s) | 3150 |
| Bse1I | ACTGG | 9 cut(s) | 1118, 1596, 1713, 1937, 2759, 2786, 2826, 2853, 3255 |
| Bse21I | CCTNAGG | 1 cut(s) | 2160 |
| Bse3DI | GCAATG | 4 cut(s) | 304, 411, 1545, 2515 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2681 |
| BseBI | CCWGG | 6 cut(s) | 266, 744, 1093, 2199, 2243, 2262 |
| BseDI | CCNNGG | 5 cut(s) | 12, 199, 1033, 1161, 1420 |
| BseJI | GATNNNNATC | 1 cut(s) | 2681 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 36, 313, 1162, 2248, 2267, 3014 |
| BseMI | GCAATG | 4 cut(s) | 304, 411, 1545, 2515 |
| BseMII | CTCAG | 6 cut(s) | 548, 635, 1698, 2151, 2189, 3051 |
| BseNI | ACTGG | 9 cut(s) | 1118, 1596, 1713, 1937, 2759, 2786, 2826, 2853, 3255 |
| BseRI | GAGGAG | 5 cut(s) | 182, 185, 458, 532, 2084 |
| BseSI | GKGCMC | 4 cut(s) | 264, 802, 1866, 2128 |
| BseXI | GCAGC | 9 cut(s) | 715, 778, 841, 887, 1537, 1547, 2183, 2691, 2895 |
| BseYI | CCCAGC | 3 cut(s) | 794, 2121, 3061 |
| Bsh1236I | CGCG | 4 cut(s) | 59, 113, 2739, 2931 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3277 |
| BshFI | GGCC | 4 cut(s) | 17, 1016, 2619, 3254 |
| BshNI | GGYRCC | 3 cut(s) | 225, 1960, 3066 |
| BshTI | ACCGGT | 1 cut(s) | 3150 |
| BsiEI | CGRYCG | 1 cut(s) | 3277 |
| BsiHKAI | GWGCWC | 6 cut(s) | 264, 535, 724, 742, 960, 1866 |
| BsiHKCI | CYCGRG | 1 cut(s) | 199 |
| BsiSI | CCGG | 6 cut(s) | 14, 37, 184, 200, 223, 3151 |
| BslFI | GGGAC | 5 cut(s) | 29, 53, 987, 2315, 3232 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 36, 313, 1162, 2248, 2267, 3014 |
| BsmAI | GTCTC | 3 cut(s) | 278, 532, 1496 |
| BsmFI | GGGAC | 5 cut(s) | 29, 53, 987, 2315, 3232 |
| BsmI | GAATGC | 6 cut(s) | 364, 844, 1001, 1189, 1210, 2286 |
| BsnI | GGCC | 4 cut(s) | 17, 1016, 2619, 3254 |
| BsoBI | CYCGRG | 1 cut(s) | 199 |
| Bsp1286I | GDGCHC | 8 cut(s) | 264, 535, 724, 742, 802, 960, 1866, 2128 |
| Bsp19I | CCATGG | 1 cut(s) | 1161 |
| Bsp68I | TCGCGA | 1 cut(s) | 2931 |
| BspANI | GGCC | 4 cut(s) | 17, 1016, 2619, 3254 |
| BspCNI | CTCAG | 6 cut(s) | 547, 636, 1697, 2152, 2188, 3050 |
| BspFNI | CGCG | 4 cut(s) | 59, 113, 2739, 2931 |
| BspMI | ACCTGC | 1 cut(s) | 809 |
| BspOI | GCTAGC | 1 cut(s) | 612 |
| BspPI | GGATC | 7 cut(s) | 194, 1805, 1814, 1850, 1991, 2267, 2841 |
| BspQI | GCTCTTC | 1 cut(s) | 730 |
| BspT107I | GGYRCC | 3 cut(s) | 225, 1960, 3066 |
| BsrBI | CCGCTC | 1 cut(s) | 220 |
| BsrDI | GCAATG | 4 cut(s) | 304, 411, 1545, 2515 |
| BsrFI | RCCGGY | 1 cut(s) | 3150 |
| BsrI | ACTGG | 9 cut(s) | 1118, 1596, 1713, 1937, 2759, 2786, 2826, 2853, 3255 |
| BssAI | RCCGGY | 1 cut(s) | 3150 |
| BssECI | CCNNGG | 5 cut(s) | 12, 199, 1033, 1161, 1420 |
| BssNAI | GTATAC | 1 cut(s) | 1735 |
| BssNI | GRCGYC | 5 cut(s) | 42, 54, 69, 125, 207 |
| BssSI | CACGAG | 1 cut(s) | 723 |
| BssT1I | CCWWGG | 3 cut(s) | 1033, 1161, 1420 |
| Bst1107I | GTATAC | 1 cut(s) | 1735 |
| Bst2BI | CACGAG | 1 cut(s) | 723 |
| Bst2UI | CCWGG | 6 cut(s) | 266, 744, 1093, 2199, 2243, 2262 |
| Bst4CI | ACNGT | 4 cut(s) | 568, 948, 1009, 1132 |
| Bst6I | CTCTTC | 4 cut(s) | 159, 730, 1523, 2313 |
| BstACI | GRCGYC | 5 cut(s) | 42, 54, 69, 125, 207 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2505 |
| BstBAI | YACGTR | 1 cut(s) | 668 |
| BstDSI | CCRYGG | 1 cut(s) | 1161 |
| BstFNI | CGCG | 4 cut(s) | 59, 113, 2739, 2931 |
| BstHHI | GCGC | 3 cut(s) | 236, 441, 2739 |
| BstMAI | GTCTC | 3 cut(s) | 278, 532, 1496 |
| BstMCI | CGRYCG | 1 cut(s) | 3277 |
| BstNI | CCWGG | 6 cut(s) | 266, 744, 1093, 2199, 2243, 2262 |
| BstNSI | RCATGY | 6 cut(s) | 329, 417, 970, 1393, 1741, 2026 |
| BstSFI | CTRYAG | 4 cut(s) | 190, 564, 2216, 2556 |
| BstSLI | GKGCMC | 4 cut(s) | 264, 802, 1866, 2128 |
| BstUI | CGCG | 4 cut(s) | 59, 113, 2739, 2931 |
| BstV1I | GCAGC | 9 cut(s) | 715, 778, 841, 887, 1537, 1547, 2183, 2691, 2895 |
| BstV2I | GAAGAC | 3 cut(s) | 123, 1757, 2209 |
| BstX2I | RGATCY | 5 cut(s) | 186, 1254, 1810, 1819, 2622 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1708 |
| BstYI | RGATCY | 5 cut(s) | 186, 1254, 1810, 1819, 2622 |
| BstZ17I | GTATAC | 1 cut(s) | 1735 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2160 |
| BsuI | GTATCC | 1 cut(s) | 1379 |
| BsuRI | GGCC | 4 cut(s) | 17, 1016, 2619, 3254 |
| BtgI | CCRYGG | 1 cut(s) | 1161 |
| BtgZI | GCGATG | 1 cut(s) | 134 |
| BtrI | CACGTC | 1 cut(s) | 178 |
| BtsI | GCAGTG | 1 cut(s) | 1104 |
| BtsIMutI | CAGTG | 7 cut(s) | 287, 576, 1005, 1104, 1706, 2846, 3262 |
| BtuMI | TCGCGA | 1 cut(s) | 2931 |
| BveI | ACCTGC | 1 cut(s) | 809 |
| CfoI | GCGC | 3 cut(s) | 236, 441, 2739 |
| Cfr10I | RCCGGY | 1 cut(s) | 3150 |
| Cfr13I | GGNCC | 7 cut(s) | 16, 974, 1115, 1711, 1882, 2239, 2617 |
| Cfr9I | CCCGGG | 1 cut(s) | 199 |
| CseI | GACGC | 4 cut(s) | 48, 62, 77, 215 |
| Csp6I | GTAC | 9 cut(s) | 226, 944, 1444, 1635, 2234, 2378, 2438, 2518, 2987 |
| CspAI | ACCGGT | 1 cut(s) | 3150 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2295, 2330 |
| CviQI | GTAC | 9 cut(s) | 226, 944, 1444, 1635, 2234, 2378, 2438, 2518, 2987 |
| DraI | TTTAAA | 1 cut(s) | 2068 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 41, 85, 2309 |
| DriI | GACNNNNNGTC | 1 cut(s) | 58 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 41, 85, 2309 |
| EaeI | YGGCCR | 1 cut(s) | 1014 |
| Eam1104I | CTCTTC | 4 cut(s) | 159, 730, 1523, 2313 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 58 |
| EarI | CTCTTC | 4 cut(s) | 159, 730, 1523, 2313 |
| Ecl136II | GAGCTC | 3 cut(s) | 533, 740, 958 |
| Eco130I | CCWWGG | 3 cut(s) | 1033, 1161, 1420 |
| Eco24I | GRGCYC | 3 cut(s) | 535, 742, 960 |
| Eco47I | GGWCC | 5 cut(s) | 974, 1115, 1711, 1882, 2239 |
| Eco53kI | GAGCTC | 3 cut(s) | 533, 740, 958 |
| Eco57I | CTGAAG | 2 cut(s) | 263, 1504 |
| Eco81I | CCTNAGG | 1 cut(s) | 2160 |
| Eco88I | CYCGRG | 1 cut(s) | 199 |
| EcoICRI | GAGCTC | 3 cut(s) | 533, 740, 958 |
| EcoO109I | RGGNCCY | 2 cut(s) | 974, 1882 |
| EcoRII | CCWGG | 6 cut(s) | 264, 742, 1091, 2197, 2241, 2260 |
| EcoT14I | CCWWGG | 3 cut(s) | 1033, 1161, 1420 |
| EcoT22I | ATGCAT | 2 cut(s) | 1003, 1210 |
| EcoT38I | GRGCYC | 3 cut(s) | 535, 742, 960 |
| ErhI | CCWWGG | 3 cut(s) | 1033, 1161, 1420 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 361, 393 |
| FaqI | GGGAC | 5 cut(s) | 29, 53, 987, 2315, 3232 |
| FauI | CCCGC | 4 cut(s) | 27, 225, 236, 1822 |
| FblI | GTMKAC | 1 cut(s) | 1734 |
| FriOI | GRGCYC | 3 cut(s) | 535, 742, 960 |
| FspBI | CTAG | 8 cut(s) | 609, 1110, 1406, 1449, 1580, 1625, 2817, 2904 |
| GlaI | GCGC | 3 cut(s) | 235, 440, 2738 |
| GsaI | CCCAGC | 3 cut(s) | 798, 2125, 3065 |
| GsuI | CTGGAG | 2 cut(s) | 834, 2583 |
| HaeIII | GGCC | 4 cut(s) | 17, 1016, 2619, 3254 |
| HapII | CCGG | 6 cut(s) | 14, 37, 184, 200, 223, 3151 |
| HgaI | GACGC | 4 cut(s) | 48, 62, 77, 215 |
| HhaI | GCGC | 3 cut(s) | 236, 441, 2739 |
| Hin1I | GRCGYC | 5 cut(s) | 42, 54, 69, 125, 207 |
| Hin6I | GCGC | 3 cut(s) | 234, 439, 2737 |
| HinP1I | GCGC | 3 cut(s) | 234, 439, 2737 |
| HincII | GTYRAC | 4 cut(s) | 1128, 1223, 2964, 3034 |
| HindII | GTYRAC | 4 cut(s) | 1128, 1223, 2964, 3034 |
| HindIII | AAGCTT | 1 cut(s) | 3324 |
| HinfI | GANTC | 8 cut(s) | 1148, 1438, 2303, 2345, 3105, 3212, 3239, 3294 |
| HpaII | CCGG | 6 cut(s) | 14, 37, 184, 200, 223, 3151 |
| HphI | GGTGA | 7 cut(s) | 157, 782, 1299, 1466, 2282, 2734, 3112 |
| Hpy99I | CGWCG | 9 cut(s) | 56, 64, 88, 91, 130, 139, 158, 161, 209 |
| HpyAV | CCTTC | 9 cut(s) | 287, 346, 698, 828, 1467, 1586, 1846, 2448, 3137 |
| HpyCH4III | ACNGT | 4 cut(s) | 568, 948, 1009, 1132 |
| HpyCH4IV | ACGT | 5 cut(s) | 42, 125, 177, 667, 849 |
| HpySE526I | ACGT | 5 cut(s) | 42, 125, 177, 667, 849 |
| Hsp92I | GRCGYC | 5 cut(s) | 42, 54, 69, 125, 207 |
| HspAI | GCGC | 3 cut(s) | 234, 439, 2737 |
| KpnI | GGTACC | 1 cut(s) | 229 |
| LguI | GCTCTTC | 1 cut(s) | 730 |
| LmnI | GCTCC | 7 cut(s) | 225, 246, 471, 530, 632, 745, 815 |
| Lsp1109I | GCAGC | 9 cut(s) | 715, 778, 841, 887, 1537, 1547, 2183, 2691, 2895 |
| MaeI | CTAG | 8 cut(s) | 609, 1110, 1406, 1449, 1580, 1625, 2817, 2904 |
| MaeII | ACGT | 5 cut(s) | 42, 125, 177, 667, 849 |
| MaeIII | GTNAC | 6 cut(s) | 1171, 1189, 1198, 1366, 1662, 1740 |
| MbiI | CCGCTC | 1 cut(s) | 220 |
| MflI | RGATCY | 5 cut(s) | 186, 1254, 1810, 1819, 2622 |
| MhlI | GDGCHC | 8 cut(s) | 264, 535, 724, 742, 802, 960, 1866, 2128 |
| MlsI | TGGCCA | 1 cut(s) | 1016 |
| MluNI | TGGCCA | 1 cut(s) | 1016 |
| MlyI | GAGTC | 3 cut(s) | 2297, 3233, 3288 |
| MmeI | TCCRAC | 3 cut(s) | 1049, 2811, 3322 |
| Mox20I | TGGCCA | 1 cut(s) | 1016 |
| Mph1103I | ATGCAT | 2 cut(s) | 1003, 1210 |
| MscI | TGGCCA | 1 cut(s) | 1016 |
| MseI | TTAA | 8 cut(s) | 1563, 1913, 1941, 2067, 2085, 2135, 3263, 3328 |
| MslI | CAYNNNNRTG | 3 cut(s) | 297, 666, 1609 |
| Msp20I | TGGCCA | 1 cut(s) | 1016 |
| MspA1I | CMGCKG | 1 cut(s) | 1196 |
| MspI | CCGG | 6 cut(s) | 14, 37, 184, 200, 223, 3151 |
| Mva1269I | GAATGC | 6 cut(s) | 364, 844, 1001, 1189, 1210, 2286 |
| MvaI | CCWGG | 6 cut(s) | 266, 744, 1093, 2199, 2243, 2262 |
| MvnI | CGCG | 4 cut(s) | 59, 113, 2739, 2931 |
| NciI | CCSGG | 4 cut(s) | 14, 38, 200, 201 |
| NcoI | CCATGG | 1 cut(s) | 1161 |
| NheI | GCTAGC | 1 cut(s) | 608 |
| NmeAIII | GCCGAG | 2 cut(s) | 379, 2994 |
| NmuCI | GTSAC | 2 cut(s) | 1171, 1662 |
| NruI | TCGCGA | 1 cut(s) | 2931 |
| NsiI | ATGCAT | 2 cut(s) | 1003, 1210 |
| NspI | RCATGY | 6 cut(s) | 329, 417, 970, 1393, 1741, 2026 |
| PaeI | GCATGC | 2 cut(s) | 329, 970 |
| PciI | ACATGT | 2 cut(s) | 1389, 1737 |
| PciSI | GCTCTTC | 1 cut(s) | 730 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 48, 131, 3274 |
| PctI | GAATGC | 6 cut(s) | 364, 844, 1001, 1189, 1210, 2286 |
| PfeI | GAWTC | 5 cut(s) | 1148, 1438, 2345, 3105, 3212 |
| PflFI | GACNNNGTC | 4 cut(s) | 71, 82, 127, 3223 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2248, 2267 |
| PfoI | TCCNGGA | 2 cut(s) | 742, 1091 |
| PinAI | ACCGGT | 1 cut(s) | 3150 |
| PleI | GAGTC | 3 cut(s) | 2297, 3233, 3288 |
| PpsI | GAGTC | 3 cut(s) | 2297, 3233, 3288 |
| Ppu21I | YACGTR | 1 cut(s) | 668 |
| PpuMI | RGGWCCY | 2 cut(s) | 974, 1882 |
| PscI | ACATGT | 2 cut(s) | 1389, 1737 |
| Psp124BI | GAGCTC | 3 cut(s) | 535, 742, 960 |
| Psp1406I | AACGTT | 1 cut(s) | 849 |
| Psp5II | RGGWCCY | 2 cut(s) | 974, 1882 |
| Psp6I | CCWGG | 6 cut(s) | 264, 742, 1091, 2197, 2241, 2260 |
| PspFI | CCCAGC | 3 cut(s) | 794, 2121, 3061 |
| PspGI | CCWGG | 6 cut(s) | 264, 742, 1091, 2197, 2241, 2260 |
| PspPI | GGNCC | 7 cut(s) | 16, 974, 1115, 1711, 1882, 2239, 2617 |
| PspPPI | RGGWCCY | 2 cut(s) | 974, 1882 |
| PsuI | RGATCY | 5 cut(s) | 186, 1254, 1810, 1819, 2622 |
| PsyI | GACNNNGTC | 4 cut(s) | 71, 82, 127, 3223 |
| PvuII | CAGCTG | 1 cut(s) | 1196 |
| RruI | TCGCGA | 1 cut(s) | 2931 |
| RsaI | GTAC | 9 cut(s) | 227, 945, 1445, 1636, 2235, 2379, 2439, 2519, 2988 |
| RsaNI | GTAC | 9 cut(s) | 226, 944, 1444, 1635, 2234, 2378, 2438, 2518, 2987 |
| RseI | CAYNNNNRTG | 3 cut(s) | 297, 666, 1609 |
| SacI | GAGCTC | 3 cut(s) | 535, 742, 960 |
| SapI | GCTCTTC | 1 cut(s) | 730 |
| SaqAI | TTAA | 8 cut(s) | 1563, 1913, 1941, 2067, 2085, 2135, 3263, 3328 |
| Sau96I | GGNCC | 7 cut(s) | 16, 974, 1115, 1711, 1882, 2239, 2617 |
| SchI | GAGTC | 3 cut(s) | 2297, 3233, 3288 |
| SduI | GDGCHC | 8 cut(s) | 264, 535, 724, 742, 802, 960, 1866, 2128 |
| SfcI | CTRYAG | 4 cut(s) | 190, 564, 2216, 2556 |
| SinI | GGWCC | 5 cut(s) | 974, 1115, 1711, 1882, 2239 |
| SmaI | CCCGGG | 1 cut(s) | 201 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 297, 666, 1609 |
| SmlI | CTYRAG | 1 cut(s) | 2804 |
| SmoI | CTYRAG | 1 cut(s) | 2804 |
| SphI | GCATGC | 2 cut(s) | 329, 970 |
| SspMI | CTAG | 8 cut(s) | 609, 1110, 1406, 1449, 1580, 1625, 2817, 2904 |
| SstI | GAGCTC | 3 cut(s) | 535, 742, 960 |
| StyI | CCWWGG | 3 cut(s) | 1033, 1161, 1420 |
| TaaI | ACNGT | 4 cut(s) | 568, 948, 1009, 1132 |
| TaiI | ACGT | 5 cut(s) | 45, 128, 180, 670, 852 |
| TaqI | TCGA | 6 cut(s) | 859, 1493, 1658, 1771, 2580, 3268 |
| TaqII | GACCGA | 1 cut(s) | 3291 |
| TatI | WGTACW | 3 cut(s) | 1634, 2377, 2986 |
| TauI | GCSGC | 2 cut(s) | 59, 505 |
| TfiI | GAWTC | 5 cut(s) | 1148, 1438, 2345, 3105, 3212 |
| Tru1I | TTAA | 8 cut(s) | 1563, 1913, 1941, 2067, 2085, 2135, 3263, 3328 |
| Tru9I | TTAA | 8 cut(s) | 1563, 1913, 1941, 2067, 2085, 2135, 3263, 3328 |
| TscAI | CASTG | 7 cut(s) | 287, 583, 1012, 1111, 1713, 2853, 3262 |
| TseFI | GTSAC | 2 cut(s) | 1171, 1662 |
| TseI | GCWGC | 9 cut(s) | 728, 791, 854, 875, 1525, 1535, 2171, 2704, 2908 |
| Tsp45I | GTSAC | 2 cut(s) | 1171, 1662 |
| TspDTI | ATGAA | 9 cut(s) | 422, 717, 2349, 2515, 2766, 2871, 2969, 3164, 3225 |
| TspGWI | ACGGA | 3 cut(s) | 1829, 2087, 2089 |
| TspMI | CCCGGG | 1 cut(s) | 199 |
| TspRI | CASTG | 7 cut(s) | 287, 583, 1012, 1111, 1713, 2853, 3262 |
| Tth111I | GACNNNGTC | 4 cut(s) | 71, 82, 127, 3223 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2248, 2267 |
| VneI | GTGCAC | 2 cut(s) | 260, 1862 |
| VpaK11BI | GGWCC | 5 cut(s) | 974, 1115, 1711, 1882, 2239 |
| XapI | RAATTY | 2 cut(s) | 760, 2010 |
| XceI | RCATGY | 6 cut(s) | 329, 417, 970, 1393, 1741, 2026 |
| XmaI | CCCGGG | 1 cut(s) | 199 |
| XmiI | GTMKAC | 1 cut(s) | 1734 |
| XspI | CTAG | 8 cut(s) | 609, 1110, 1406, 1449, 1580, 1625, 2817, 2904 |
| ZraI | GACGTC | 2 cut(s) | 43, 126 |
| Zsp2I | ATGCAT | 2 cut(s) | 1003, 1210 |